MELO3C014728T5 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014728T5
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Tetratricopeptide repeat containing protein
Location	chr5 : 123596 .. 126027 (+)
Sequence length	1272

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATTTAGGACCAAAGAAATCGAACGGAAGTCTCACTCTTCCTTCCTTCCTTGGAAATGCATTCACTATTACATCTAATCCCCTCTTGAGTGTGAGCAGTGAGCAGTGAGCAGTGAAGAATTTTGATGTTCACCACCATGTCTTTAGCTCCCCATTATCTCTATTCTTCACGCTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCCACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTACGAAGAGTACGAAGTGGAGCTAGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCTCCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACCGTTGGTGATAGAGTTCTTGCTACCAGGTTCCTCTCAGTTCAGCTTTTCTTCATCAATAACTATTTATTTCATACGCTTAGCAATTTTGAATTGTCAAAGAAAAAACTATAGGATGTGCTTTCGTCCATTACCTGCGACTTTTCAAAACGGTGTATGCAGGTTCAATGCATAACTTTTTCTTTAAACATCGTCCCTGAATCTTTATTTGTGGCGCCTGGATGAACCCTGAGATAGCGTGATCACCATCTCCGTTATATTAACCTTATGCGCTTTCGTTGCTATGTTCAAAATCACATATGAGACTAAAAGCTTATTTTGCAACATTCATCACTTCCGACGTTGAAATTATCACAATCTAGATAGGTTACAATAATACAACATGCAACTCATATCCTTGACACTAGAAGAAGATGAACAACGCTTCAAAATTGGATTCTTGTTGATTTCTGTATTCATCCTAATGGAAGTAAAATGAAGCTTCCACAGGTTAGAATTTTAATTGACCCAACTGTTTTAGTGAAAGGTGAATTATAATGCCATGTGCTCATAACTTCTGTCTTCTTGTTGTTGTTGCGTGGTGTATTTTTGTTTTAAAAGAAAGTTCAAAGAAGAAAAAAAAAAAAACAGAGAAGACTAGTTTGCATGATTTCTACATATCTCCAACAAACGTGGCTTAGCCTAGAATGAAAATGTGAAACAGAAATATCCTAGCAGAAACATTCGCAGCTTTTCTTCCATGGTTGGGATATGATAAACAAAATCGCTTCATCTATGCAGTGCAGTATTTGGTACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCGTTACTCATGAAAATGCAGAAGAGATATGGTTAGTTATCAATCACACTCAACACATGAATAACCCATAGCAAATGAAAATGAAGGATGATCAGATTTCTTATCTTAAATTGGCTGACGACTTGTATATATCTTAGTTCACAAAAAGACATAATACTCTTAACATCCTCTATAAATATGACCTTTATAAATTGTTTGTGATTGTTTTTTCAGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAATGTTTTCTATTAGCTAATAGTATCCTATTGAGGCAAGTAACATCTCCATTCTCTTTCCTCATTTTTCTAAGCTTGGCAAGTAAGTATCATGCAATACTTCGCAGTTAGCAGAATGTCAGTGAGGACTTATCTGGAAAATATGAGCTGCGAAACATTGATTTAGCATTTAAAATCTCTGCTATATTGTTGGCATATTATAGGTCTAATTGTTGTTACAGTTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAATGACCTACGCCAAGGGCTGCGTCTCTACAAGTATGTGGTGTATATCCAACTTATCCTCTCCCCGTATGGTTTACTTTTGTAGTGAAGACACATCAATGCCCAAATTCCTACTTTCTTTCTGTTTTTTCCCCTCAAGGAATGCTAAATATGAGGAAGCCTTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCAGACGAAGCTTCGGTTGCTAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGGTAATGCTTTTGCTTTAATGTGGAATTTGTTGTAACAATATCTAAAATTGCAATCTCATGTTGAATATGAAACTTCGGCTTAGGTTGAGGTTGATGTAGATTATACAATAATTGTTGCCCATAGTTTATTTAGAAAAGTCATTTGTGAAATGAAATAAAAATAGTATTTCACTGAACTTCAATTTTAAATTAGAAAGAAATAGTAGATTTTGTTAAATGAATATTAGATT

mRNA sequence

GTTATTTAGGACCAAAGAAATCGAACGGAAGTCTCACTCTTCCTTCCTTCCTTGGAAATGCATTCACTATTACATCTAATCCCCTCTTGAGTGTGAGCAGTGAGCAGTGAGCAGTGAAGAATTTTGATGTTCACCACCATGTCTTTAGCTCCCCATTATCTCTATTCTTCACGCTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCCACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTACGAAGAGTACGAAGTGGAGCTAGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCTCCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACCGTTGGTGATAGAGTTCTTGCTACCAGTGCAGTATTTGGTACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCGTTACTCATGAAAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAATTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAATGACCTACGCCAAGGGCTGCGTCTCTACAAGTATGTGGTGTATATCCAACTTATCCTCTCCCCGTATGGTTTACTTTTGTAGTGAAGACACATCAATGCCCAAATTCCTACTTTCTTTCTGTTTTTTCCCCTCAAGGAATGCTAAATATGAGGAAGCCTTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCAGACGAAGCTTCGGTTGCTAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGGTAATGCTTTTGCTTTAATGTGGAATTTGTTGTAACAATATCTAAAATTGCAATCTCATGTTGAATATGAAACTTCGGCTTAGGTTGAGGTTGATGTAGATTATACAATAATTGTTGCCCATAGTTTATTTAGAAAAGTCATTTGTGAAATGAAATAAAAATAGTATTTCACTGAACTTCAATTTTAAATTAGAAAGAAATAGTAGATTTTGTTAAATGAATATTAGATT

Coding sequence (CDS)

ATGTTCACCACCATGTCTTTAGCTCCCCATTATCTCTATTCTTCACGCTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCCACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTACGAAGAGTACGAAGTGGAGCTAGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCTCCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACCGTTGGTGATAGAGTTCTTGCTACCAGTGCAGTATTTGGTACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCGTTACTCATGAAAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAATTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAATGACCTACGCCAAGGGCTGCGTCTCTACAAGTATGTGGTGTATATCCAACTTATCCTCTCCCCGTATGGTTTACTTTTGTAG

Protein sequence

MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVYIQLILSPYGLLL*

Homology

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BLAST of MELO3C014728T5 vs. TrEMBL
Match: A0A0A0KWR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268040 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.0e-123
Identity = 226/236 (95.76%), Postives = 227/236 (96.19%), Query Frame = 1


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSS--SSSFILCSQSHSHPKLSHPPFSTSFSTSHS 60
           MF TMSLAP YLYSS LLPKICPPNHSS  SSSFILCSQSHSHPKLSH PFSTSFSTSHS
Sbjct: 1   MFNTMSLAPPYLYSSHLLPKICPPNHSSSSSSSFILCSQSHSHPKLSHLPFSTSFSTSHS 60

Query: 61  LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120
           LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG
Sbjct: 61  LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120

Query: 121 GFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180
           GFADKTGLFTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF
Sbjct: 121 GFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180

Query: 181 GELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVY 235
           GELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYK   Y
Sbjct: 181 GELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKNAKY 236

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BLAST of MELO3C014728T5 vs. TrEMBL
Match: A0A067K3A5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.3e-74
Identity = 151/231 (65.37%), Postives = 173/231 (74.89%), Query Frame = 1


Query: 12  LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKHSPFILRASDT 71
           LYSS   P+     +  +      +        S   +STS S +H LK+S   + AS+T
Sbjct: 11  LYSSPPFPRTNTSTNKQNPLVFYQTNHFLSKNFSFFTYSTSLSNTHLLKNSNLTVNASET 70

Query: 72  ESKTDT--------DSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADK 131
           ESKT          + +   ++ YEEYEVE+EQPYGLKFAKGRDGGTYIDAIAPGG ADK
Sbjct: 71  ESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADK 130

Query: 132 TGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTE 191
           TGLF+VGDRV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGK D  GELTE
Sbjct: 131 TGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKLDYAGELTE 190

Query: 192 KEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVY 235
           KEIIRAERNSGVVSN+VREIQ+QN LR KEQKA+RENDLR+GL+LYK   Y
Sbjct: 191 KEIIRAERNSGVVSNRVREIQMQNYLRKKEQKAQRENDLREGLQLYKAAKY 241

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BLAST of MELO3C014728T5 vs. TrEMBL
Match: B9SBN8_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0342940 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.2e-70
Identity = 151/239 (63.18%), Postives = 178/239 (74.48%), Query Frame = 1


Query: 5   MSLAPHY---LYSSRLLPKICPPNHSSSSSFILCSQSHSH--PKLSHPPFSTSFSTSHSL 64
           MSLAP     LY+S  LP+      +     ++ SQ++       S    STSFS++H L
Sbjct: 1   MSLAPSSYASLYTSPPLPRTITIKQNP----LIFSQNNPFFSKNCSFFTTSTSFSSTHLL 60

Query: 65  KHSPFILRASDTESKTDTD----SDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAI 124
           K S   ++AS+TESK        ++   ++ YEEYEVEL QPYG+KFAKGRDG TYIDAI
Sbjct: 61  KPSNLTVKASETESKASKSESGSTEGEGEEQYEEYEVELLQPYGIKFAKGRDGATYIDAI 120

Query: 125 APGGFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKT 184
           APGG ADKTG+FTVGD+V+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMK+QKRYGKT
Sbjct: 121 APGGAADKTGMFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKLQKRYGKT 180

Query: 185 DSFGELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVY 235
           D  GE+TEKEIIRAERNSG +S++VREIQ+QN LR KEQKA+RE DLR GL LYK   Y
Sbjct: 181 DYAGEMTEKEIIRAERNSGFISDRVREIQMQNYLRKKEQKAQREKDLRDGLILYKNAKY 235

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BLAST of MELO3C014728T5 vs. TrEMBL
Match: A0A061GYM1_THECC (Uncharacterized protein (Fragment) OS=Theobroma cacao GN=TCM_039852 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.0e-70
Identity = 149/235 (63.40%), Postives = 177/235 (75.32%), Query Frame = 1


Query: 3   TTMSLAPHY---LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSL 62
           +TMSLAP     L SS  LP+      SS    +  + + S    S    S SF ++   
Sbjct: 39  STMSLAPSSHPSLCSSPPLPRTSHILFSSIKHVVFNNSNCSFFSTS----SVSFCSAKEP 98

Query: 63  KHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGG 122
           K    +++AS+TES+T T+ +  +++ YEEYE+E+EQPYGLKF KGRDGGTYIDAI PGG
Sbjct: 99  KPPVSVVKASETESQT-TNQEPESEEQYEEYEIEIEQPYGLKFRKGRDGGTYIDAILPGG 158

Query: 123 FADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFG 182
            ADKTG+FTVGD+VLATSAVFGTEIWP+AEYGRTMYTIRQRIGPLLMKMQKRYGK D  G
Sbjct: 159 AADKTGVFTVGDKVLATSAVFGTEIWPSAEYGRTMYTIRQRIGPLLMKMQKRYGKVDDGG 218

Query: 183 ELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVY 235
           ELTEKEIIRAERNSGV+SN+VREIQ+QN LR KEQK RR  DLR+GL+LY+   Y
Sbjct: 219 ELTEKEIIRAERNSGVISNRVREIQMQNYLRKKEQKERRAMDLREGLQLYRSAKY 268

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BLAST of MELO3C014728T5 vs. TrEMBL
Match: A0A0D2V4A2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G114400 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.0e-70
Identity = 148/234 (63.25%), Postives = 172/234 (73.50%), Query Frame = 1


Query: 5   MSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKHSPF 64
           M+LAP   Y S L    C P H ++   +L S  H   + +    ++  S    LK    
Sbjct: 1   MALAPT-TYPSYLCSNTCSPLHRATQP-LLSSTRHVGVRFNSKCSASFCSGKEQLKPWIL 60

Query: 65  ILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKT 124
           + +ASD ES+T     +  +Q YEEYEVE+EQPYGLKF KGRDGGTYIDAI PGG ADK 
Sbjct: 61  VAKASDGESQTT----EQEEQQYEEYEVEIEQPYGLKFRKGRDGGTYIDAIQPGGAADKA 120

Query: 125 GLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEK 184
           G+FTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGK D  GELTEK
Sbjct: 121 GVFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKVDEGGELTEK 180

Query: 185 EIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVYIQLI 239
           EIIRAERNSGV+S++VREIQ+QN +R KEQK RRE DLR+GL+LYK   Y Q +
Sbjct: 181 EIIRAERNSGVISDRVREIQMQNYMRKKEQKERRETDLREGLQLYKSGNYEQAL 228

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BLAST of MELO3C014728T5 vs. TAIR10
Match: AT1G55480.1 (AT1G55480.1 protein containing PDZ domain, a K-box domain, and a TPR region)

HSP 1 Score: 258.1 bits (658), Expect = 5.6e-69
Identity = 141/231 (61.04%), Postives = 163/231 (70.56%), Query Frame = 1


Query: 5   MSLAPHY---LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKH 64
           MSLAP     LYSS  LP+        + S I  S   S   L     S S   +H  K 
Sbjct: 1   MSLAPSSYPSLYSSPSLPRT--QQTKQNPSLITQSSFISAKSLFLSSNSASLCNTHVAKR 60

Query: 65  SPFILRASDTES--KTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGG 124
               L+AS+TES  K +   D   ++ YE YE+E+EQPYGLKF KGRDGGTYIDAI PGG
Sbjct: 61  RNLALKASETESSAKAEAGGDGEEEEKYETYEIEVEQPYGLKFRKGRDGGTYIDAILPGG 120

Query: 125 FADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFG 184
            ADKTG FTVGDRV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+M+KR GK +  G
Sbjct: 121 SADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMQMEKRNGKAEDTG 180

Query: 185 ELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYK 231
           ELTEKEIIRAERN+G +S+++REIQ+QN L+ KEQKA+RE DLR+GL+  K
Sbjct: 181 ELTEKEIIRAERNAGYISSRLREIQMQNYLKKKEQKAQREKDLREGLQFSK 229

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BLAST of MELO3C014728T5 vs. TAIR10
Match: AT5G17170.1 (AT5G17170.1 rubredoxin family protein)

HSP 1 Score: 55.1 bits (131), Expect = 7.3e-08
Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 1


Query: 91  EVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAAEY 150
           EVE+++P GL   + + GG  I  +  GG A K GL + GD+V+ TS+ FG E+WPA + 
Sbjct: 87  EVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKS-GDQVVYTSSFFGDELWPADKL 146

Query: 151 GRTMYTIRQR 161
           G T   I+ +
Sbjct: 147 GFTKTAIQAK 155

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BLAST of MELO3C014728T5 vs. TAIR10
Match: AT3G01510.1 (AT3G01510.1 like SEX4 1)

HSP 1 Score: 49.7 bits (117), Expect = 3.0e-06
Identity = 26/96 (27.08%), Postives = 45/96 (46.88%), Query Frame = 1


Query: 77  TDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLAT 136
           + S  P +    EY V LE+P G++FA   DG  ++ AI  G  A+K  +  VGD +   
Sbjct: 64  SSSSTPFKMNLNEYMVTLEKPLGIRFALSADGKIFVHAIKKGSNAEKARIIMVGDTLKKA 123

Query: 137 SAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRY 173
           S   G  +    ++G T   + ++ G   + +++ +
Sbjct: 124 SDSSGGTLVEIKDFGDTKKMLVEKTGSFSLVLERPF 159

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BLAST of MELO3C014728T5 vs. NCBI nr
Match: gi|659097949|ref|XP_008449894.1| (PREDICTED: uncharacterized protein LOC103491636 [Cucumis melo])

HSP 1 Score: 467.6 bits (1202), Expect = 1.3e-128
Identity = 231/234 (98.72%), Postives = 231/234 (98.72%), Query Frame = 1


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLK 60
           MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLK
Sbjct: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLK 60

Query: 61  HSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF 120
           HSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF
Sbjct: 61  HSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF 120

Query: 121 ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE 180
           ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE
Sbjct: 121 ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE 180

Query: 181 LTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVY 235
           LTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYK   Y
Sbjct: 181 LTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKNAKY 234

[Close]

BLAST of MELO3C014728T5 vs. NCBI nr
Match: gi|449463844|ref|XP_004149641.1| (PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus])

HSP 1 Score: 449.9 bits (1156), Expect = 2.9e-123
Identity = 226/236 (95.76%), Postives = 227/236 (96.19%), Query Frame = 1


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSS--SSSFILCSQSHSHPKLSHPPFSTSFSTSHS 60
           MF TMSLAP YLYSS LLPKICPPNHSS  SSSFILCSQSHSHPKLSH PFSTSFSTSHS
Sbjct: 1   MFNTMSLAPPYLYSSHLLPKICPPNHSSSSSSSFILCSQSHSHPKLSHLPFSTSFSTSHS 60

Query: 61  LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120
           LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG
Sbjct: 61  LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120

Query: 121 GFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180
           GFADKTGLFTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF
Sbjct: 121 GFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180

Query: 181 GELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVY 235
           GELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYK   Y
Sbjct: 181 GELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKNAKY 236

[Close]

BLAST of MELO3C014728T5 vs. NCBI nr
Match: gi|802659250|ref|XP_012080818.1| (PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas])

HSP 1 Score: 287.7 bits (735), Expect = 1.9e-74
Identity = 151/231 (65.37%), Postives = 173/231 (74.89%), Query Frame = 1


Query: 12  LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKHSPFILRASDT 71
           LYSS   P+     +  +      +        S   +STS S +H LK+S   + AS+T
Sbjct: 11  LYSSPPFPRTNTSTNKQNPLVFYQTNHFLSKNFSFFTYSTSLSNTHLLKNSNLTVNASET 70

Query: 72  ESKTDT--------DSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADK 131
           ESKT          + +   ++ YEEYEVE+EQPYGLKFAKGRDGGTYIDAIAPGG ADK
Sbjct: 71  ESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADK 130

Query: 132 TGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTE 191
           TGLF+VGDRV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGK D  GELTE
Sbjct: 131 TGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKLDYAGELTE 190

Query: 192 KEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVY 235
           KEIIRAERNSGVVSN+VREIQ+QN LR KEQKA+RENDLR+GL+LYK   Y
Sbjct: 191 KEIIRAERNSGVVSNRVREIQMQNYLRKKEQKAQRENDLREGLQLYKAAKY 241

[Close]

BLAST of MELO3C014728T5 vs. NCBI nr
Match: gi|470117615|ref|XP_004294949.1| (PREDICTED: uncharacterized protein LOC101313964 [Fragaria vesca subsp. vesca])

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-72
Identity = 153/229 (66.81%), Postives = 180/229 (78.60%), Query Frame = 1


Query: 5   MSLAPHY---LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKH 64
           MSLAP     LYSS  LP+     H+ +  F   SQ+ +   L+    S+SF  +  +K 
Sbjct: 1   MSLAPTSHLSLYSSPPLPRAALTRHNPALVF---SQTKNWSCLTT---SSSFLNTQLVKL 60

Query: 65  SPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFA 124
           S F++RAS+TES T  +S+    +PYEEYEVE+ QPYGLKF KGRDGGTYIDAIAPGGFA
Sbjct: 61  SIFVVRASETESPT-AESEGGGDEPYEEYEVEIIQPYGLKFTKGRDGGTYIDAIAPGGFA 120

Query: 125 DKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGEL 184
           +KTG FTVGD+VLATSAVFG EIWPA+EYGRTMYTIRQR+GPLLMKMQKRYGK D+ GEL
Sbjct: 121 EKTGKFTVGDKVLATSAVFGEEIWPASEYGRTMYTIRQRVGPLLMKMQKRYGKLDTSGEL 180

Query: 185 TEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYK 231
           TEKEIIRAERNSG+VS K+REIQ+QN LR KEQKA+RE+DLR GL+LYK
Sbjct: 181 TEKEIIRAERNSGIVSGKLREIQMQNYLRKKEQKAQRESDLRVGLQLYK 222

[Close]

BLAST of MELO3C014728T5 vs. NCBI nr
Match: gi|225435790|ref|XP_002285744.1| (PREDICTED: uncharacterized protein LOC100241562 [Vitis vinifera])

HSP 1 Score: 279.3 bits (713), Expect = 6.7e-72
Identity = 154/233 (66.09%), Postives = 176/233 (75.54%), Query Frame = 1


Query: 5   MSLAPHY---LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKH 64
           MSLAP     LYSS  LP+  P   SS    + CS +HS    S P    SF  +H +K 
Sbjct: 1   MSLAPSSYASLYSSPPLPRTVPMRQSSFCK-LPCS-NHS----SIPTGLISFCNTHLVKP 60

Query: 65  SPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFA 124
           S  ++RAS+TE  + T   +  ++ YEEYEVEL QPYGLKFAKGRDGGTYIDAIAPGG A
Sbjct: 61  SILVVRASETEP-SQTSKSESEEEKYEEYEVELVQPYGLKFAKGRDGGTYIDAIAPGGSA 120

Query: 125 DKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGEL 184
           DKT +FTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGK D+ GEL
Sbjct: 121 DKTEMFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKVDNTGEL 180

Query: 185 TEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKYVVY 235
           TEKEIIRAERNSGV+SN+VREIQ+QN  +  EQK RR  DLR+GL+LY+   Y
Sbjct: 181 TEKEIIRAERNSGVISNRVREIQMQNYQKKMEQKERRAKDLREGLQLYRSAKY 226

The following BLAST results are available for this feature:

BLAST of MELO3C014728T5 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWR6_CUCSA	2.0e-123	95.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268040 PE=4 SV=1	[more]
A0A067K3A5_JATCU	1.3e-74	65.37	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1	[more]
B9SBN8_RICCO	1.2e-70	63.18	Protein binding protein, putative OS=Ricinus communis GN=RCOM_0342940 PE=4 SV=1	[more]
A0A061GYM1_THECC	2.0e-70	63.40	Uncharacterized protein (Fragment) OS=Theobroma cacao GN=TCM_039852 PE=4 SV=1	[more]
A0A0D2V4A2_GOSRA	2.0e-70	63.25	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G114400 PE=4 SV=1	[more]

BLAST of MELO3C014728T5 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55480.1	5.6e-69	61.04	protein containing PDZ domain, a K-box domain, and a TPR region	[more]
AT5G17170.1	7.3e-08	41.43	rubredoxin family protein	[more]
AT3G01510.1	3.0e-06	27.08	like SEX4 1	[more]

BLAST of MELO3C014728T5 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097949\|ref\|XP_008449894.1\|	1.3e-128	98.72	PREDICTED: uncharacterized protein LOC103491636 [Cucumis melo]	[more]
gi\|449463844\|ref\|XP_004149641.1\|	2.9e-123	95.76	PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus]	[more]
gi\|802659250\|ref\|XP_012080818.1\|	1.9e-74	65.37	PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas]	[more]
gi\|470117615\|ref\|XP_004294949.1\|	1.4e-72	66.81	PREDICTED: uncharacterized protein LOC101313964 [Fragaria vesca subsp. vesca]	[more]
gi\|225435790\|ref\|XP_002285744.1\|	6.7e-72	66.09	PREDICTED: uncharacterized protein LOC100241562 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001478	PDZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009575	chromoplast stroma
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C014728	MELO3C014728	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C014728T5	MELO3C014728T5-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C014728T5.cds1	MELO3C014728T5.cds1	CDS
MELO3C014728T5.cds2	MELO3C014728T5.cds2	CDS
MELO3C014728T5.cds3	MELO3C014728T5.cds3	CDS
MELO3C014728T5.cds4	MELO3C014728T5.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001478	PDZ domain	GENE3D	G3DSA:2.30.42.10		coord: 70..135 score: 1.
IPR001478	PDZ domain	PROFILE	PS50106	PDZ	coord: 98..137 score: 9
IPR001478	PDZ domain	unknown	SSF50156	PDZ domain-like	coord: 82..135 score: 7.5
None	No IPR available	PANTHER	PTHR17130	MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25	coord: 50..230 score: 1.6
None	No IPR available	PANTHER	PTHR17130:SF24	GAN	coord: 50..230 score: 1.6