MELO3C014728T3 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014728T3
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Tetratricopeptide repeat containing protein
Location	chr5 : 123596 .. 126710 (+)
Sequence length	1596

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATTTAGGACCAAAGAAATCGAACGGAAGTCTCACTCTTCCTTCCTTCCTTGGAAATGCATTCACTATTACATCTAATCCCCTCTTGAGTGTGAGCAGTGAGCAGTGAGCAGTGAAGAATTTTGATGTTCACCACCATGTCTTTAGCTCCCCATTATCTCTATTCTTCACGCTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCCACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTACGAAGAGTACGAAGTGGAGCTAGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCTCCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACCGTTGGTGATAGAGTTCTTGCTACCAGGTTCCTCTCAGTTCAGCTTTTCTTCATCAATAACTATTTATTTCATACGCTTAGCAATTTTGAATTGTCAAAGAAAAAACTATAGGATGTGCTTTCGTCCATTACCTGCGACTTTTCAAAACGGTGTATGCAGGTTCAATGCATAACTTTTTCTTTAAACATCGTCCCTGAATCTTTATTTGTGGCGCCTGGATGAACCCTGAGATAGCGTGATCACCATCTCCGTTATATTAACCTTATGCGCTTTCGTTGCTATGTTCAAAATCACATATGAGACTAAAAGCTTATTTTGCAACATTCATCACTTCCGACGTTGAAATTATCACAATCTAGATAGGTTACAATAATACAACATGCAACTCATATCCTTGACACTAGAAGAAGATGAACAACGCTTCAAAATTGGATTCTTGTTGATTTCTGTATTCATCCTAATGGAAGTAAAATGAAGCTTCCACAGGTTAGAATTTTAATTGACCCAACTGTTTTAGTGAAAGGTGAATTATAATGCCATGTGCTCATAACTTCTGTCTTCTTGTTGTTGTTGCGTGGTGTATTTTTGTTTTAAAAGAAAGTTCAAAGAAGAAAAAAAAAAAAACAGAGAAGACTAGTTTGCATGATTTCTACATATCTCCAACAAACGTGGCTTAGCCTAGAATGAAAATGTGAAACAGAAATATCCTAGCAGAAACATTCGCAGCTTTTCTTCCATGGTTGGGATATGATAAACAAAATCGCTTCATCTATGCAGTGCAGTATTTGGTACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCGTTACTCATGAAAATGCAGAAGAGATATGGTTAGTTATCAATCACACTCAACACATGAATAACCCATAGCAAATGAAAATGAAGGATGATCAGATTTCTTATCTTAAATTGGCTGACGACTTGTATATATCTTAGTTCACAAAAAGACATAATACTCTTAACATCCTCTATAAATATGACCTTTATAAATTGTTTGTGATTGTTTTTTCAGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAATGTTTTCTATTAGCTAATAGTATCCTATTGAGGCAAGTAACATCTCCATTCTCTTTCCTCATTTTTCTAAGCTTGGCAAGTAAGTATCATGCAATACTTCGCAGTTAGCAGAATGTCAGTGAGGACTTATCTGGAAAATATGAGCTGCGAAACATTGATTTAGCATTTAAAATCTCTGCTATATTGTTGGCATATTATAGGTCTAATTGTTGTTACAGTTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAATGACCTACGCCAAGGGCTGCGTCTCTACAAGTATGTGGTGTATATCCAACTTATCCTCTCCCCGTATGGTTTACTTTTGTAGTGAAGACACATCAATGCCCAAATTCCTACTTTCTTTCTGTTTTTTCCCCTCAAGGAATGCTAAATATGAGGAAGCCTTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCAGACGAAGCTTCGGTTGCTAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGGTAATGCTTTTGCTTTAATGTGGAATTTGTTGTAACAATATCTAAAATTGCAATCTCATGTTGAATATGAAACTTCGGCTTAGGTTGAGGTTGATGTAGATTATACAATAATTGTTGCCCATAGTTTATTTAGAAAAGTCATTTGTGAAATGAAATAAAAATAGTATTTCACTGAACTTCAATTTTAAATTAGAAAGAAATAGTAGATTTTGTTAAATGAATATTAGATTAGTGAGATTTAGCTACAATGCTTATTATTTCAAAGTACGCAATCCCATGACTTTAGTTTACCATACTTCGTATAGACCCATTTGTTTGTTTACGTTACCATCTTCCTAGACAAAATCACCCAAAATGGGGATAACTGATCCCCTATATAATGCTCAAACAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGGAGCAGGATTTGAAGACTTTAAGGTAACAACCGCTTCAAGTTTTGAAATAATATTACTTGCATTGGACAATTTGGGTGGAAGTTGTGAAAGTATTACTTGTATATTTGCCAGAGAGTTCGGACGGATCCTGATCTATCAAACCTAAGGGCATTAGAGGAATTTGAGCCTCTTGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCCATCAATGCCATCAAGTCCCTATTCGGCTTCAAAACATAAAAACAGACTCTTCTACATTAATCGTTTATTAAACAATTCACATTCTTGTTGTCACAACTTGTATATAAGTATCCTGAGCTTCTAGCTTTTAGACGAGTAACAAAAGAATTTCAAGGGAATTTGTTCCCATAAGGAAAAAACTTTACATATTCATATTGGTGATCCTATACACAGTATAGCTATGTTGAAGAAACCTGTTTGTGTTCAATTAATTCCAAGATAGTCAGTTTCTCTA

mRNA sequence

GTTATTTAGGACCAAAGAAATCGAACGGAAGTCTCACTCTTCCTTCCTTCCTTGGAAATGCATTCACTATTACATCTAATCCCCTCTTGAGTGTGAGCAGTGAGCAGTGAGCAGTGAAGAATTTTGATGTTCACCACCATGTCTTTAGCTCCCCATTATCTCTATTCTTCACGCTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCCACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTACGAAGAGTACGAAGTGGAGCTAGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCTCCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACCGTTGGTGATAGAGTTCTTGCTACCAGTGCAGTATTTGGTACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCGTTACTCATGAAAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAATGTTTTCTATTAGCTAATAGTATCCTATTGAGGCAAGTAACATCTCCATTCTCTTTCCTCATTTTTCTAAGCTTGGCAAGTAAGTATCATGCAATACTTCGCAGTTAGCAGAATGTCAGTGAGGACTTATCTGGAAAATATGAGCTGCGAAACATTGATTTAGCATTTAAAATCTCTGCTATATTGTTGGCATATTATAGGTCTAATTGTTGTTACAGTTGCAAAATGCCTTGAGAATGAAGGAGCAGAAAGCACGCAGAGAAAATGACCTACGCCAAGGGCTGCGTCTCTACAAGAATGCTAAATATGAGGAAGCCTTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCAGACGAAGCTTCGGTTGCTAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGGAGCAGGATTTGAAGACTTTAAGAGAGTTCGGACGGATCCTGATCTATCAAACCTAAGGGCATTAGAGGAATTTGAGCCTCTTGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCCATCAATGCCATCAAGTCCCTATTCGGCTTCAAAACATAAAAACAGACTCTTCTACATTAATCGTTTATTAAACAATTCACATTCTTGTTGTCACAACTTGTATATAAGTATCCTGAGCTTCTAGCTTTTAGACGAGTAACAAAAGAATTTCAAGGGAATTTGTTCCCATAAGGAAAAAACTTTACATATTCATATTGGTGATCCTATACACAGTATAGCTATGTTGAAGAAACCTGTTTGTGTTCAATTAATTCCAAGATAGTCAGTTTCTCTA

Coding sequence (CDS)

ATGTTCACCACCATGTCTTTAGCTCCCCATTATCTCTATTCTTCACGCTTACTTCCCAAAATTTGCCCTCCTAACCATTCCTCTTCCTCTTCCTTCATTCTATGCTCTCAATCCCATTCCCATCCCAAACTCTCTCATCCACCTTTCTCCACTTCCTTTTCAACTTCTCATTCCCTTAAACACTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAACCGACACTGATTCAGATGATCCTAACCAACAACCTTACGAAGAGTACGAAGTGGAGCTAGAGCAGCCTTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCTCCTGGTGGTTTTGCCGACAAGACTGGATTGTTCACCGTTGGTGATAGAGTTCTTGCTACCAGTGCAGTATTTGGTACAGAAATATGGCCCGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCGTTACTCATGAAAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAATGTTTTCTATTAGCTAATAGTATCCTATTGAGGCAAGTAACATCTCCATTCTCTTTCCTCATTTTTCTAAGCTTGGCAAGTAAGTATCATGCAATACTTCGCAGTTAG

Protein sequence

MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQVSECFLLANSILLRQVTSPFSFLIFLSLASKYHAILRS*

Homology

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BLAST of MELO3C014728T3 vs. TrEMBL
Match: A0A0A0KWR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268040 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.0e-108
Identity = 199/207 (96.14%), Postives = 201/207 (97.10%), Query Frame = 1


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSS--SSSFILCSQSHSHPKLSHPPFSTSFSTSHS 60
           MF TMSLAP YLYSS LLPKICPPNHSS  SSSFILCSQSHSHPKLSH PFSTSFSTSHS
Sbjct: 1   MFNTMSLAPPYLYSSHLLPKICPPNHSSSSSSSFILCSQSHSHPKLSHLPFSTSFSTSHS 60

Query: 61  LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120
           LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG
Sbjct: 61  LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120

Query: 121 GFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180
           GFADKTGLFTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF
Sbjct: 121 GFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180

Query: 181 GELTEKEIIRAERNSGVVSNKVREIQV 206
           GELTEKEIIRAERNSGVVSNKVREIQ+
Sbjct: 181 GELTEKEIIRAERNSGVVSNKVREIQL 207

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BLAST of MELO3C014728T3 vs. TrEMBL
Match: A0A067K3A5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.5e-62
Identity = 130/202 (64.36%), Postives = 149/202 (73.76%), Query Frame = 1


Query: 12  LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKHSPFILRASDT 71
           LYSS   P+     +  +      +        S   +STS S +H LK+S   + AS+T
Sbjct: 11  LYSSPPFPRTNTSTNKQNPLVFYQTNHFLSKNFSFFTYSTSLSNTHLLKNSNLTVNASET 70

Query: 72  ESKTDT--------DSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADK 131
           ESKT          + +   ++ YEEYEVE+EQPYGLKFAKGRDGGTYIDAIAPGG ADK
Sbjct: 71  ESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADK 130

Query: 132 TGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTE 191
           TGLF+VGDRV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGK D  GELTE
Sbjct: 131 TGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKLDYAGELTE 190

Query: 192 KEIIRAERNSGVVSNKVREIQV 206
           KEIIRAERNSGVVSN+VREIQ+
Sbjct: 191 KEIIRAERNSGVVSNRVREIQM 212

[Close]

BLAST of MELO3C014728T3 vs. TrEMBL
Match: A0A059AES8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01758 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 8.1e-61
Identity = 128/199 (64.32%), Postives = 151/199 (75.88%), Query Frame = 1


Query: 12  LYSSRLLPKICPPNHSSSSSFILCSQSHSHPK-LSHPPFSTSFSTSHSLKHSPFILRASD 71
           L SS  LP+      +  S  +L    HS  K  S    S  FS +H  K S  +++AS+
Sbjct: 137 LCSSPPLPRTA---QNKPSQLVLFHTKHSFSKKCSFVSLSGHFSETHLAKASNLVVKASE 196

Query: 72  TESKTDTDSDD----PNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGL 131
           TES+T  ++ +      ++ YEEYEVE+EQPYGL+F KGRDGGTYIDAIAPGG ADKTG+
Sbjct: 197 TESQTSPEAAEGGGGEGEEEYEEYEVEIEQPYGLRFVKGRDGGTYIDAIAPGGSADKTGV 256

Query: 132 FTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEI 191
           FTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGK +  GELTEKEI
Sbjct: 257 FTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKLEEAGELTEKEI 316

Query: 192 IRAERNSGVVSNKVREIQV 206
           IRAERNSGV+SN+VREIQ+
Sbjct: 317 IRAERNSGVISNRVREIQM 332

[Close]

BLAST of MELO3C014728T3 vs. TrEMBL
Match: A0A059AE18_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01758 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 8.1e-61
Identity = 128/199 (64.32%), Postives = 151/199 (75.88%), Query Frame = 1


Query: 12  LYSSRLLPKICPPNHSSSSSFILCSQSHSHPK-LSHPPFSTSFSTSHSLKHSPFILRASD 71
           L SS  LP+      +  S  +L    HS  K  S    S  FS +H  K S  +++AS+
Sbjct: 137 LCSSPPLPRTA---QNKPSQLVLFHTKHSFSKKCSFVSLSGHFSETHLAKASNLVVKASE 196

Query: 72  TESKTDTDSDD----PNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGL 131
           TES+T  ++ +      ++ YEEYEVE+EQPYGL+F KGRDGGTYIDAIAPGG ADKTG+
Sbjct: 197 TESQTSPEAAEGGGGEGEEEYEEYEVEIEQPYGLRFVKGRDGGTYIDAIAPGGSADKTGV 256

Query: 132 FTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEI 191
           FTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGK +  GELTEKEI
Sbjct: 257 FTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKLEEAGELTEKEI 316

Query: 192 IRAERNSGVVSNKVREIQV 206
           IRAERNSGV+SN+VREIQ+
Sbjct: 317 IRAERNSGVISNRVREIQM 332

[Close]

BLAST of MELO3C014728T3 vs. TrEMBL
Match: A0A118JU51_CYNCS (PDZ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007080 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.4e-60
Identity = 130/207 (62.80%), Postives = 157/207 (75.85%), Query Frame = 1


Query: 5   MSLAPHY---LYSSRLLPKICPPNHSSSSSFILCS---QSHSHPKLSHPPFSTSFSTSHS 64
           M+ AP+    + +S  LP+    +   + SF+       SH +P+     FS     S+ 
Sbjct: 1   MATAPNSYPSICASPPLPRTLNSSTKQTLSFVTSQFKQTSHKNPQTLR--FSIRLGNSNL 60

Query: 65  LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 124
            K S  ++RAS+T+S + T++    ++ YEEYEVE+EQPYGLKFAKGRDGGTYIDAIAPG
Sbjct: 61  EKQSILVVRASETDSSS-TENGGEEEERYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPG 120

Query: 125 GFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 184
           GFADKT +F+VGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGK +  
Sbjct: 121 GFADKTKMFSVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKMEDS 180

Query: 185 GELTEKEIIRAERNSGVVSNKVREIQV 206
           GELTEKEIIRAERNSGVVS+KVREIQ+
Sbjct: 181 GELTEKEIIRAERNSGVVSSKVREIQM 204

[Close]

BLAST of MELO3C014728T3 vs. TAIR10
Match: AT1G55480.1 (AT1G55480.1 protein containing PDZ domain, a K-box domain, and a TPR region)

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-59
Identity = 125/206 (60.68%), Postives = 143/206 (69.42%), Query Frame = 1


Query: 5   MSLAPHY---LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKH 64
           MSLAP     LYSS  LP+        + S I  S   S   L     S S   +H  K 
Sbjct: 1   MSLAPSSYPSLYSSPSLPRT--QQTKQNPSLITQSSFISAKSLFLSSNSASLCNTHVAKR 60

Query: 65  SPFILRASDTES--KTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGG 124
               L+AS+TES  K +   D   ++ YE YE+E+EQPYGLKF KGRDGGTYIDAI PGG
Sbjct: 61  RNLALKASETESSAKAEAGGDGEEEEKYETYEIEVEQPYGLKFRKGRDGGTYIDAILPGG 120

Query: 125 FADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFG 184
            ADKTG FTVGDRV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+M+KR GK +  G
Sbjct: 121 SADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMQMEKRNGKAEDTG 180

Query: 185 ELTEKEIIRAERNSGVVSNKVREIQV 206
           ELTEKEIIRAERN+G +S+++REIQ+
Sbjct: 181 ELTEKEIIRAERNAGYISSRLREIQM 204

[Close]

BLAST of MELO3C014728T3 vs. TAIR10
Match: AT5G17170.1 (AT5G17170.1 rubredoxin family protein)

HSP 1 Score: 55.1 bits (131), Expect = 7.1e-08
Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 1


Query: 91  EVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLATSAVFGTEIWPAAEY 150
           EVE+++P GL   + + GG  I  +  GG A K GL + GD+V+ TS+ FG E+WPA + 
Sbjct: 87  EVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKS-GDQVVYTSSFFGDELWPADKL 146

Query: 151 GRTMYTIRQR 161
           G T   I+ +
Sbjct: 147 GFTKTAIQAK 155

[Close]

BLAST of MELO3C014728T3 vs. TAIR10
Match: AT3G01510.1 (AT3G01510.1 like SEX4 1)

HSP 1 Score: 49.7 bits (117), Expect = 3.0e-06
Identity = 26/96 (27.08%), Postives = 45/96 (46.88%), Query Frame = 1


Query: 77  TDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVLAT 136
           + S  P +    EY V LE+P G++FA   DG  ++ AI  G  A+K  +  VGD +   
Sbjct: 64  SSSSTPFKMNLNEYMVTLEKPLGIRFALSADGKIFVHAIKKGSNAEKARIIMVGDTLKKA 123

Query: 137 SAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRY 173
           S   G  +    ++G T   + ++ G   + +++ +
Sbjct: 124 SDSSGGTLVEIKDFGDTKKMLVEKTGSFSLVLERPF 159

[Close]

BLAST of MELO3C014728T3 vs. NCBI nr
Match: gi|659097949|ref|XP_008449894.1| (PREDICTED: uncharacterized protein LOC103491636 [Cucumis melo])

HSP 1 Score: 417.2 bits (1071), Expect = 2.0e-113
Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 1


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLK 60
           MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLK
Sbjct: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLK 60

Query: 61  HSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF 120
           HSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF
Sbjct: 61  HSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGF 120

Query: 121 ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE 180
           ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE
Sbjct: 121 ADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGE 180

Query: 181 LTEKEIIRAERNSGVVSNKVREIQV 206
           LTEKEIIRAERNSGVVSNKVREIQ+
Sbjct: 181 LTEKEIIRAERNSGVVSNKVREIQL 205

[Close]

BLAST of MELO3C014728T3 vs. NCBI nr
Match: gi|449463844|ref|XP_004149641.1| (PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 4.4e-108
Identity = 199/207 (96.14%), Postives = 201/207 (97.10%), Query Frame = 1


Query: 1   MFTTMSLAPHYLYSSRLLPKICPPNHSS--SSSFILCSQSHSHPKLSHPPFSTSFSTSHS 60
           MF TMSLAP YLYSS LLPKICPPNHSS  SSSFILCSQSHSHPKLSH PFSTSFSTSHS
Sbjct: 1   MFNTMSLAPPYLYSSHLLPKICPPNHSSSSSSSFILCSQSHSHPKLSHLPFSTSFSTSHS 60

Query: 61  LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120
           LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG
Sbjct: 61  LKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPG 120

Query: 121 GFADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180
           GFADKTGLFTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF
Sbjct: 121 GFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSF 180

Query: 181 GELTEKEIIRAERNSGVVSNKVREIQV 206
           GELTEKEIIRAERNSGVVSNKVREIQ+
Sbjct: 181 GELTEKEIIRAERNSGVVSNKVREIQL 207

[Close]

BLAST of MELO3C014728T3 vs. NCBI nr
Match: gi|225435790|ref|XP_002285744.1| (PREDICTED: uncharacterized protein LOC100241562 [Vitis vinifera])

HSP 1 Score: 250.4 bits (638), Expect = 3.3e-63
Identity = 139/204 (68.14%), Postives = 157/204 (76.96%), Query Frame = 1


Query: 5   MSLAPHY---LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKH 64
           MSLAP     LYSS  LP+  P   SS    + CS +HS    S P    SF  +H +K 
Sbjct: 1   MSLAPSSYASLYSSPPLPRTVPMRQSSFCK-LPCS-NHS----SIPTGLISFCNTHLVKP 60

Query: 65  SPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFA 124
           S  ++RAS+TE  + T   +  ++ YEEYEVEL QPYGLKFAKGRDGGTYIDAIAPGG A
Sbjct: 61  SILVVRASETEP-SQTSKSESEEEKYEEYEVELVQPYGLKFAKGRDGGTYIDAIAPGGSA 120

Query: 125 DKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGEL 184
           DKT +FTVGD+VLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGK D+ GEL
Sbjct: 121 DKTEMFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKVDNTGEL 180

Query: 185 TEKEIIRAERNSGVVSNKVREIQV 206
           TEKEIIRAERNSGV+SN+VREIQ+
Sbjct: 181 TEKEIIRAERNSGVISNRVREIQM 197

[Close]

BLAST of MELO3C014728T3 vs. NCBI nr
Match: gi|802659250|ref|XP_012080818.1| (PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas])

HSP 1 Score: 246.9 bits (629), Expect = 3.6e-62
Identity = 130/202 (64.36%), Postives = 149/202 (73.76%), Query Frame = 1


Query: 12  LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKHSPFILRASDT 71
           LYSS   P+     +  +      +        S   +STS S +H LK+S   + AS+T
Sbjct: 11  LYSSPPFPRTNTSTNKQNPLVFYQTNHFLSKNFSFFTYSTSLSNTHLLKNSNLTVNASET 70

Query: 72  ESKTDT--------DSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADK 131
           ESKT          + +   ++ YEEYEVE+EQPYGLKFAKGRDGGTYIDAIAPGG ADK
Sbjct: 71  ESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADK 130

Query: 132 TGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTE 191
           TGLF+VGDRV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGK D  GELTE
Sbjct: 131 TGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKLDYAGELTE 190

Query: 192 KEIIRAERNSGVVSNKVREIQV 206
           KEIIRAERNSGVVSN+VREIQ+
Sbjct: 191 KEIIRAERNSGVVSNRVREIQM 212

[Close]

BLAST of MELO3C014728T3 vs. NCBI nr
Match: gi|470117615|ref|XP_004294949.1| (PREDICTED: uncharacterized protein LOC101313964 [Fragaria vesca subsp. vesca])

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61
Identity = 134/204 (65.69%), Postives = 158/204 (77.45%), Query Frame = 1


Query: 5   MSLAPHY---LYSSRLLPKICPPNHSSSSSFILCSQSHSHPKLSHPPFSTSFSTSHSLKH 64
           MSLAP     LYSS  LP+     H+ +  F   SQ+ +   L+    S+SF  +  +K 
Sbjct: 1   MSLAPTSHLSLYSSPPLPRAALTRHNPALVF---SQTKNWSCLTT---SSSFLNTQLVKL 60

Query: 65  SPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFA 124
           S F++RAS+TES T  +S+    +PYEEYEVE+ QPYGLKF KGRDGGTYIDAIAPGGFA
Sbjct: 61  SIFVVRASETESPT-AESEGGGDEPYEEYEVEIIQPYGLKFTKGRDGGTYIDAIAPGGFA 120

Query: 125 DKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGEL 184
           +KTG FTVGD+VLATSAVFG EIWPA+EYGRTMYTIRQR+GPLLMKMQKRYGK D+ GEL
Sbjct: 121 EKTGKFTVGDKVLATSAVFGEEIWPASEYGRTMYTIRQRVGPLLMKMQKRYGKLDTSGEL 180

Query: 185 TEKEIIRAERNSGVVSNKVREIQV 206
           TEKEIIRAERNSG+VS K+REIQ+
Sbjct: 181 TEKEIIRAERNSGIVSGKLREIQM 197

The following BLAST results are available for this feature:

BLAST of MELO3C014728T3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWR6_CUCSA	3.0e-108	96.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268040 PE=4 SV=1	[more]
A0A067K3A5_JATCU	2.5e-62	64.36	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1	[more]
A0A059AES8_EUCGR	8.1e-61	64.32	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01758 PE=4 SV=1	[more]
A0A059AE18_EUCGR	8.1e-61	64.32	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01758 PE=4 SV=1	[more]
A0A118JU51_CYNCS	2.4e-60	62.80	PDZ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007080...	[more]

BLAST of MELO3C014728T3 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55480.1	1.4e-59	60.68	protein containing PDZ domain, a K-box domain, and a TPR region	[more]
AT5G17170.1	7.1e-08	41.43	rubredoxin family protein	[more]
AT3G01510.1	3.0e-06	27.08	like SEX4 1	[more]

BLAST of MELO3C014728T3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097949\|ref\|XP_008449894.1\|	2.0e-113	99.51	PREDICTED: uncharacterized protein LOC103491636 [Cucumis melo]	[more]
gi\|449463844\|ref\|XP_004149641.1\|	4.4e-108	96.14	PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus]	[more]
gi\|225435790\|ref\|XP_002285744.1\|	3.3e-63	68.14	PREDICTED: uncharacterized protein LOC100241562 [Vitis vinifera]	[more]
gi\|802659250\|ref\|XP_012080818.1\|	3.6e-62	64.36	PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas]	[more]
gi\|470117615\|ref\|XP_004294949.1\|	1.1e-61	65.69	PREDICTED: uncharacterized protein LOC101313964 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001478	PDZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009575	chromoplast stroma
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C014728	MELO3C014728	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C014728T3	MELO3C014728T3-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C014728T3.cds1	MELO3C014728T3.cds1	CDS
MELO3C014728T3.cds2	MELO3C014728T3.cds2	CDS
MELO3C014728T3.cds3	MELO3C014728T3.cds3	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001478	PDZ domain	GENE3D	G3DSA:2.30.42.10		coord: 73..135 score: 2.
IPR001478	PDZ domain	PROFILE	PS50106	PDZ	coord: 98..137 score: 9
IPR001478	PDZ domain	unknown	SSF50156	PDZ domain-like	coord: 82..135 score: 7.2
None	No IPR available	PANTHER	PTHR17130	MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25	coord: 50..205 score: 3.2
None	No IPR available	PANTHER	PTHR17130:SF24	GAN	coord: 50..205 score: 3.2