MELO3C014436T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014436T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ubiquitin-protein ligase, putative
Location	chr5 : 2418521 .. 2420346 (-)
Sequence length	1651

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAGATAAGAAGAGTTCCTTAAAGTAGAAAAGTAGCACAGCCGTAGATTTCAAGGATTTTATTTTGACCATTTCAAATTCATATGAGCTATCATGTTCATTTGAATACATGATTTACATGATTTTGATGTTCAAATAACACCCCTTGTAATGTCTAGAAGGTGTCACTTCAAGATTCAGTAGATTTGTGTTTGAAAGGATTTAAGCTTAGAAATGGGAGAGATGATGAAAAAACCACCCAACACTATCATGTGTTCATGTGTCACCTACCCTAAAGATTATTCTGTATTAACAATAATTTTCTGCAGGTTTGAGATACTTCACATCATGCAGTTAGTTCAGATGGTGGGCTTTCCTTTATTTTAGTTCAAAGGAAATGGAGCGAAAGAACCTCTTCCAACACACGGTTCGATTTGGACTAATTATTATATGCATTAAGGTCATACATAAAATATTTTTATTTAATACAGGTTTAGAAGGTAAAATGGTGTATTCTCGCCAGACACGGTTAGCTTGAATGACGCATAGGTCTACCTTTTCCCGCTCAAATAGGGGCACTAATTTGAATTAGGTACTCTCCAACCCACCTGAAGTCTTTGTTAGTGGTAGAGGTAGAGTTAAGAGTTAGAGAGAGAAATGTCAATTGTCAACAGAGCAATCAAACAAGGCGGGTCCCCTTTTCCATATAGATCGAGATCGATGCCTGCACGTTTATTGCTTTACTCTCTCTTCATTGCCTGCTGCGGCGCGCTCCCCTCCACTCCAATGCTAACCACAAAGACTTTGATCAATCACCCCATTCAATTCAACTACACAAGCTTTCCTTAGACCCAACTTCTTCAGTTCAGATATGGAATTGGAATGAATGGCAGACATGGCATGGCCCTTCGTTCTACTTCCCAGTCTCTCTCTTCTTCACCTCCACTTGACCATGGCGGACTTCTTTCAGCTCAGTTAATGACGTTCTATCCCTGAAGATCTACAGAAAGAAAACCCAAAACTGGTTAGTAGGATCATTCTCTCTTTCATTAAAAACCAACTTTTCTTTTCTTGATTTTGCTCGTTCTTTGTTCTGAAAAGACATTGTTTGAAGTATTCTTCTTTCTGGGTATCTCTGGTTTGTAATCTTCTCTGTTTCATTTCACACCATACTTCCTTTTCGGGGTTTGTTGTGTCAGATTGGCATCTAGAAGGAATTTGAAGAGGAAATGGAGCGGGCTAATCGAGGGCGGAGATGGGCCAATTTAAAGCAACGGCTAGGATTGAAGGGGATGGGGTGCTGTAGAGGTTCATGGAGTCCAACATCGTCAACTTTGACAATGATTGAAGGGTTTAGCTTAAGCCTCCATGGAAGCAGCCGCAGTCAAAGAGAAGATGGGGGTCGGAGCTCAGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGAGGAGTGACGAAGGAGGCCCCACGGGCGCTAGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAAACAAAACGAAAGGAAGGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCATGGAAAGGAGTAAAGGCGCGGCTTTTATTCCCTGTGGACACACCTTCTGTAGGGTATGTTCTAGGGAATTATGGCTTAACAGAGGCACGTGTCCCATCTGCAGCCGTTCGATCATTGAGATTCTTGACATTTTTTAAAATTTTTAAAAATTATTTTTGTTTTCGTAAATTATTATCTCAATGTGATTTGTTTTTTCTTTTTCTTTTTCTTTTTTTTTCTTTTTCCCTTTTTGTTTTATTTGTTGG

mRNA sequence

CTGAGATAAGAAGAGTTCCTTAAAGTAGAAAAGTAGCACAGCCGTAGATTTCAAGGATTTTATTTTGACCATTTCAAATTCATATGAGCTATCATGTTCATTTGAATACATGATTTACATGATTTTGATGTTCAAATAACACCCCTTGTAATGTCTAGAAGGTGTCACTTCAAGATTCAGTAGATTTGTGTTTGAAAGGATTTAAGCTTAGAAATGGGAGAGATGATGAAAAAACCACCCAACACTATCATGTGTTCATGTGTCACCTACCCTAAAGATTATTCTGTATTAACAATAATTTTCTGCAGGTTTGAGATACTTCACATCATGCAGTTAGTTCAGATGGTGGGCTTTCCTTTATTTTAGTTCAAAGGAAATGGAGCGAAAGAACCTCTTCCAACACACGGTTCGATTTGGACTAATTATTATATGCATTAAGGTCATACATAAAATATTTTTATTTAATACAGGTTTAGAAGGTAAAATGGTGTATTCTCGCCAGACACGGTTAGCTTGAATGACGCATAGGTCTACCTTTTCCCGCTCAAATAGGGGCACTAATTTGAATTAGGTACTCTCCAACCCACCTGAAGTCTTTGTTAGTGGTAGAGGTAGAGTTAAGAGTTAGAGAGAGAAATGTCAATTGTCAACAGAGCAATCAAACAAGGCGGGTCCCCTTTTCCATATAGATCGAGATCGATGCCTGCACGTTTATTGCTTTACTCTCTCTTCATTGCCTGCTGCGGCGCGCTCCCCTCCACTCCAATGCTAACCACAAAGACTTTGATCAATCACCCCATTCAATTCAACTACACAAGCTTTCCTTAGACCCAACTTCTTCAGTTCAGATATGGAATTGGAATGAATGGCAGACATGGCATGGCCCTTCGTTCTACTTCCCAGTCTCTCTCTTCTTCACCTCCACTTGACCATGGCGGACTTCTTTCAGCTCAGTTAATGACGTTCTATCCCTGAAGATCTACAGAAAGAAAACCCAAAACTGATTGGCATCTAGAAGGAATTTGAAGAGGAAATGGAGCGGGCTAATCGAGGGCGGAGATGGGCCAATTTAAAGCAACGGCTAGGATTGAAGGGGATGGGGTGCTGTAGAGGTTCATGGAGTCCAACATCGTCAACTTTGACAATGATTGAAGGGTTTAGCTTAAGCCTCCATGGAAGCAGCCGCAGTCAAAGAGAAGATGGGGGTCGGAGCTCAGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGAGGAGTGACGAAGGAGGCCCCACGGGCGCTAGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAAACAAAACGAAAGGAAGGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCATGGAAAGGAGTAAAGGCGCGGCTTTTATTCCCTGTGGACACACCTTCTGTAGGGTATGTTCTAGGGAATTATGGCTTAACAGAGGCACGTGTCCCATCTGCAGCCGTTCGATCATTGAGATTCTTGACATTTTTTAAAATTTTTAAAAATTATTTTTGTTTTCGTAAATTATTATCTCAATGTGATTTGTTTTTTCTTTTTCTTTTTCTTTTTTTTTCTTTTTCCCTTTTTGTTTTATTTGTTGG

Coding sequence (CDS)

ATGGAGCGGGCTAATCGAGGGCGGAGATGGGCCAATTTAAAGCAACGGCTAGGATTGAAGGGGATGGGGTGCTGTAGAGGTTCATGGAGTCCAACATCGTCAACTTTGACAATGATTGAAGGGTTTAGCTTAAGCCTCCATGGAAGCAGCCGCAGTCAAAGAGAAGATGGGGGTCGGAGCTCAGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGGCGGAGAGAAATTTGAGGAGTGACGAAGGAGGCCCCACGGGCGCTAGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAAACAAAACGAAAGGAAGGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCATGGAAAGGAGTAAAGGCGCGGCTTTTATTCCCTGTGGACACACCTTCTGTAGGGTATGTTCTAGGGAATTATGGCTTAACAGAGGCACGTGTCCCATCTGCAGCCGTTCGATCATTGAGATTCTTGACATTTTTTAA

Protein sequence

MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF*

Homology

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BLAST of MELO3C014436T1 vs. TrEMBL
Match: A0A0A0KEL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421620 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.8e-91
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 1


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MERANR RRW NL+QRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQ EDGGRS
Sbjct: 1   MERANRRRRWTNLRQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQGEDGGRS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SAASGMNLAMALAAERNLR+DEGGPTG SDVKSLMRLFEEMDGGDWKTKRKE ENNGDWM
Sbjct: 61  SAASGMNLAMALAAERNLRNDEGGPTGGSDVKSLMRLFEEMDGGDWKTKRKESENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of MELO3C014436T1 vs. TrEMBL
Match: W9SUF0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004822 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.5e-53
Identity = 106/173 (61.27%), Postives = 125/173 (72.25%), Query Frame = 1


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           M+ A+R  RW ++KQRLGLKGMGCC  +WSP+ STLT+IE      H  +      G   
Sbjct: 28  MDGADRIGRWTSIKQRLGLKGMGCCGATWSPSPSTLTIIETLEEEHHHRTEPVSV-GPVQ 87

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGAS-DVKSLMRLFEEMDGGDWKTKRKEGENNG-- 120
           +A  GMNLAMALAAERN R+   GPT AS  VKSLM L EEMD  DW  +R+     G  
Sbjct: 88  AAVPGMNLAMALAAERNSRAGREGPTTASGQVKSLMTLIEEMDDVDWSNRRRRDNKEGGD 147

Query: 121 -DWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
            DW+CCVCMER+KGAAFIPCGHTFCRVCSRE+W+NRGTCP+CSR I+EILDI+
Sbjct: 148 SDWLCCVCMERNKGAAFIPCGHTFCRVCSREMWVNRGTCPLCSRPIVEILDIY 199

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BLAST of MELO3C014436T1 vs. TrEMBL
Match: A0A067EKA2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036555mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 104/193 (53.89%), Postives = 121/193 (62.69%), Query Frame = 1


Query: 6   RGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMI--------------EGFSLSLHGSSR 65
           R R W NLKQRL LKGMGCC   WS  + TLT++               G  + +H  + 
Sbjct: 7   RRRVWQNLKQRLRLKGMGCCGSMWSFRTQTLTIMPRQEEEEEEPEEQERGTHVRMHMRNA 66

Query: 66  SQREDGGRSSAASGMNLAMALAAERNLRSDEG-----GPTGASDVKSLMRLFEEMDGGDW 125
           +       +     MNLAMALAAERNLRS +G          + VK+LM L EE DGGDW
Sbjct: 67  AASVTAAGAGTTINMNLAMALAAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEETDGGDW 126

Query: 126 KTKRKEGENNG----------DWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCP 170
           + K K+G+  G          DWMCCVCMER+KGAAFIPCGHTFCRVCSR+LWLNRGTCP
Sbjct: 127 QMK-KDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTCP 186

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BLAST of MELO3C014436T1 vs. TrEMBL
Match: V4UF21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016774mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-46
Identity = 104/194 (53.61%), Postives = 121/194 (62.37%), Query Frame = 1


Query: 6   RGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMI---------------EGFSLSLHGSS 65
           R R W NLKQRL LKGMGCC   WS  + TLT++                G  + +H  +
Sbjct: 7   RTRVWQNLKQRLRLKGMGCCGSMWSFRTQTLTIMPRQEEEEQEEPEEQERGTHVRMHMRN 66

Query: 66  RSQREDGGRSSAASGMNLAMALAAERNLRSDEG-----GPTGASDVKSLMRLFEEMDGGD 125
            +       +     MNLAMALAAERNLRS +G          + VK+LM L EE DGGD
Sbjct: 67  AAASVTAAGAGTTINMNLAMALAAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEETDGGD 126

Query: 126 WKTKRKEGENNG----------DWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTC 170
           W+ K K+G+  G          DWMCCVCMER+KGAAFIPCGHTFCRVCSR+LWLNRGTC
Sbjct: 127 WQMK-KDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTC 186

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BLAST of MELO3C014436T1 vs. TrEMBL
Match: A0A061DKM7_THECC (Ubiquitin-protein ligase, putative OS=Theobroma cacao GN=TCM_002176 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.6e-45
Identity = 109/222 (49.10%), Postives = 134/222 (60.36%), Query Frame = 1


Query: 1   MERANRGRR--WANLKQRLGLKGMGCCRGSWSPTS--STLTMIEGFS------------- 60
           ME   R RR  W NLKQRLGLK MGCC  +WSP +  ST++++E                
Sbjct: 1   MESIVRDRRASWKNLKQRLGLKAMGCCGATWSPRARISTISILEEDEDEEEEAAAVAAQS 60

Query: 61  ----LSLHGS---SRSQREDGGRSS---------------AASGMNLAMALAAERNLRSD 120
               +S  G+   +R Q +    +S               A SGMNLAMALAAERNLR+ 
Sbjct: 61  QQVIISRSGNVVNNRIQNQTENSASTPLLVGQQQQQQVPTAGSGMNLAMALAAERNLRTA 120

Query: 121 EGGPTGASDVKSLMRLFEEMDGGDWKTKRKE--------------GENNGDWMCCVCMER 170
             GP+  ++VK+LMRL EE DG DWK KRK+              G  + DWMCCVCMER
Sbjct: 121 NMGPS-PTEVKTLMRLIEETDGVDWKKKRKDNVVNVEGVGVGGLGGGGSCDWMCCVCMER 180

[Close]

BLAST of MELO3C014436T1 vs. TAIR10
Match: AT4G03965.1 (AT4G03965.1 RING/U-box superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 4.5e-33
Identity = 87/185 (47.03%), Postives = 109/185 (58.92%), Query Frame = 1


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMI---EGFSLSLHGSSRSQREDG 60
           ++R+ R +R   LK+RLG K +GCC  +W    ++ T     E F   L   S     D 
Sbjct: 32  LDRSRRRKR--TLKERLGFKRIGCCGPTWGLRLTSNTGEDDDEPFENRLVSGS-----DH 91

Query: 61  GRSSAASGMNLAMALAAERNLRSDEGGPTGA-SDVK-SLMRLFEEMDGG----DWKTKRK 120
                  GMNLA ALAAERN R++E   +G+ + +K SLMRL EE        + +T+R 
Sbjct: 92  VTGPLNQGMNLATALAAERNYRTEETEASGSLTPLKVSLMRLLEETAERVVVEENETERV 151

Query: 121 EGEN-------NGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIE 170
                      N D +CCVCM R KGAAFIPCGHTFCRVCSRE+WLNRG+CP+C+R IIE
Sbjct: 152 TASASSTVRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIE 209

[Close]

BLAST of MELO3C014436T1 vs. TAIR10
Match: AT4G22250.1 (AT4G22250.1 RING/U-box superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 5.5e-31
Identity = 82/177 (46.33%), Postives = 93/177 (52.54%), Query Frame = 1


Query: 8   RRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDG----GRSSAA 67
           RR   LK+RL  K +GCC  +W+   +  T +   +         Q E G        + 
Sbjct: 38  RRKRTLKERLRFKCIGCCGPTWNLRLTNNTTLHSPTSRDDEIEELQIETGLVLESDHGSG 97

Query: 68  SGMNLAMALAAERNLR--SDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGE------- 127
           +GMNLA AL AER  R  S E          SLMRL EE          KE E       
Sbjct: 98  TGMNLATALEAERYNRGESTEAEADMTPRRVSLMRLLEETAEKIVDDDGKETEILTASIG 157

Query: 128 --NNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
                D +CCVCM R KGAAFIPCGHTFCRVCSRELWLNRG+CP+C+R IIEILDIF
Sbjct: 158 TLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214

[Close]

BLAST of MELO3C014436T1 vs. TAIR10
Match: AT1G62370.1 (AT1G62370.1 RING/U-box superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26
Identity = 73/174 (41.95%), Postives = 89/174 (51.15%), Query Frame = 1


Query: 9   RWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQRE-------DGGRSS 68
           +W  LKQRL    +GCC     P +  L   E   +        + +       D G  +
Sbjct: 40  KWTTLKQRLRFDWVGCCG---KPLTLRLRQAETPIVVDDDDDEEESQNQVVDFSDPGTGT 99

Query: 69  A------ASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGEN 128
                   S  NLA ALA ER     E   T  + V  LMRL  E DG D  T       
Sbjct: 100 ELDCLTRGSTRNLAEALAEERLAHVTEE-ETAVTKVP-LMRLLAESDGCDSTTTWL---- 159

Query: 129 NGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
             D +CCVCM R KGAAFIPCGHT+CRVCSRE+W+NRGTCP+C+RSI ++LD++
Sbjct: 160 GNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204

[Close]

BLAST of MELO3C014436T1 vs. TAIR10
Match: AT3G25030.1 (AT3G25030.1 RING/U-box superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-24
Identity = 75/193 (38.86%), Postives = 98/193 (50.78%), Query Frame = 1


Query: 1   MERANRGRR----WANLKQRLGLKGMGCCRGSWSPTSSTLTMIE---------GFSLSLH 60
           M+R +R  R    W +L+++L LK  G    S +   S  T I          GF LS  
Sbjct: 63  MQREHRHSRDKTAWKSLREKLRLKRNGSVWISSNSIPSLDTPIPNRDNVSHQLGFLLSNS 122

Query: 61  GSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVK----SLMRLFEEMDG 120
           G+   +      SS    + L   LA ER L + E       +V+    SLM L EE +G
Sbjct: 123 GNVTEEA-----SSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEG 182

Query: 121 G-DWKTKRKEGENN------GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCP 170
              + +   E E         +  CCVCM RSKGAAFIPCGHTFCR+CSRELW+ RG CP
Sbjct: 183 QMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCP 242

[Close]

BLAST of MELO3C014436T1 vs. TAIR10
Match: AT4G13100.2 (AT4G13100.2 RING/U-box superfamily protein)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-22
Identity = 71/202 (35.15%), Postives = 94/202 (46.53%), Query Frame = 1


Query: 2   ERANRGRRWANLKQRLGLK--GMGCCRGSWSPTSSTLTMIE----------GFSLSLHGS 61
           ER      W +L+ +L LK    G    +  PT     +            GF L+   +
Sbjct: 75  ERRRDKTAWKSLRDKLRLKRTATGWISSNPIPTLDNHILTPDNDSHRFNRLGFLLTNSET 134

Query: 62  SRSQREDGGRSSAASG----MNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGD 121
           +RS R+    +  A+     + L   LAAER                SLM L E+ DG  
Sbjct: 135 NRSSRDVSDAAEEAAEREGRLRLGTVLAAERE-----------PPRMSLMELLEDNDGHM 194

Query: 122 WK-TKRKEGENNG-----------------DWMCCVCMERSKGAAFIPCGHTFCRVCSRE 170
           ++ + R E E  G                 +  CCVCM RSKGAAFIPCGHTFCR+CSRE
Sbjct: 195 YELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRE 254

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BLAST of MELO3C014436T1 vs. NCBI nr
Match: gi|659097176|ref|XP_008449482.1| (PREDICTED: uncharacterized protein LOC103491356 [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 2.3e-95
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS
Sbjct: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM
Sbjct: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of MELO3C014436T1 vs. NCBI nr
Match: gi|700192764|gb|KGN47968.1| (hypothetical protein Csa_6G421620 [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 2.6e-91
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 1


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           MERANR RRW NL+QRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQ EDGGRS
Sbjct: 1   MERANRRRRWTNLRQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQGEDGGRS 60

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120
           SAASGMNLAMALAAERNLR+DEGGPTG SDVKSLMRLFEEMDGGDWKTKRKE ENNGDWM
Sbjct: 61  SAASGMNLAMALAAERNLRNDEGGPTGGSDVKSLMRLFEEMDGGDWKTKRKESENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of MELO3C014436T1 vs. NCBI nr
Match: gi|703153220|ref|XP_010110624.1| (hypothetical protein L484_004822 [Morus notabilis])

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 106/173 (61.27%), Postives = 125/173 (72.25%), Query Frame = 1


Query: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60
           M+ A+R  RW ++KQRLGLKGMGCC  +WSP+ STLT+IE      H  +      G   
Sbjct: 28  MDGADRIGRWTSIKQRLGLKGMGCCGATWSPSPSTLTIIETLEEEHHHRTEPVSV-GPVQ 87

Query: 61  SAASGMNLAMALAAERNLRSDEGGPTGAS-DVKSLMRLFEEMDGGDWKTKRKEGENNG-- 120
           +A  GMNLAMALAAERN R+   GPT AS  VKSLM L EEMD  DW  +R+     G  
Sbjct: 88  AAVPGMNLAMALAAERNSRAGREGPTTASGQVKSLMTLIEEMDDVDWSNRRRRDNKEGGD 147

Query: 121 -DWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 170
            DW+CCVCMER+KGAAFIPCGHTFCRVCSRE+W+NRGTCP+CSR I+EILDI+
Sbjct: 148 SDWLCCVCMERNKGAAFIPCGHTFCRVCSREMWVNRGTCPLCSRPIVEILDIY 199

[Close]

BLAST of MELO3C014436T1 vs. NCBI nr
Match: gi|641835332|gb|KDO54310.1| (hypothetical protein CISIN_1g036555mg [Citrus sinensis])

HSP 1 Score: 194.1 bits (492), Expect = 2.0e-46
Identity = 104/193 (53.89%), Postives = 121/193 (62.69%), Query Frame = 1


Query: 6   RGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMI--------------EGFSLSLHGSSR 65
           R R W NLKQRL LKGMGCC   WS  + TLT++               G  + +H  + 
Sbjct: 7   RRRVWQNLKQRLRLKGMGCCGSMWSFRTQTLTIMPRQEEEEEEPEEQERGTHVRMHMRNA 66

Query: 66  SQREDGGRSSAASGMNLAMALAAERNLRSDEG-----GPTGASDVKSLMRLFEEMDGGDW 125
           +       +     MNLAMALAAERNLRS +G          + VK+LM L EE DGGDW
Sbjct: 67  AASVTAAGAGTTINMNLAMALAAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEETDGGDW 126

Query: 126 KTKRKEGENNG----------DWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCP 170
           + K K+G+  G          DWMCCVCMER+KGAAFIPCGHTFCRVCSR+LWLNRGTCP
Sbjct: 127 QMK-KDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTCP 186

[Close]

BLAST of MELO3C014436T1 vs. NCBI nr
Match: gi|567910675|ref|XP_006447651.1| (hypothetical protein CICLE_v10016774mg [Citrus clementina])

HSP 1 Score: 193.7 bits (491), Expect = 2.6e-46
Identity = 104/194 (53.61%), Postives = 121/194 (62.37%), Query Frame = 1


Query: 6   RGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMI---------------EGFSLSLHGSS 65
           R R W NLKQRL LKGMGCC   WS  + TLT++                G  + +H  +
Sbjct: 7   RTRVWQNLKQRLRLKGMGCCGSMWSFRTQTLTIMPRQEEEEQEEPEEQERGTHVRMHMRN 66

Query: 66  RSQREDGGRSSAASGMNLAMALAAERNLRSDEG-----GPTGASDVKSLMRLFEEMDGGD 125
            +       +     MNLAMALAAERNLRS +G          + VK+LM L EE DGGD
Sbjct: 67  AAASVTAAGAGTTINMNLAMALAAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEETDGGD 126

Query: 126 WKTKRKEGENNG----------DWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTC 170
           W+ K K+G+  G          DWMCCVCMER+KGAAFIPCGHTFCRVCSR+LWLNRGTC
Sbjct: 127 WQMK-KDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTC 186

The following BLAST results are available for this feature:

BLAST of MELO3C014436T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEL6_CUCSA	1.8e-91	95.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421620 PE=4 SV=1	[more]
W9SUF0_9ROSA	7.5e-53	61.27	Uncharacterized protein OS=Morus notabilis GN=L484_004822 PE=4 SV=1	[more]
A0A067EKA2_CITSI	1.4e-46	53.89	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036555mg PE=4 SV=1	[more]
V4UF21_9ROSI	1.8e-46	53.61	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016774mg PE=4 SV=1	[more]
A0A061DKM7_THECC	2.6e-45	49.10	Ubiquitin-protein ligase, putative OS=Theobroma cacao GN=TCM_002176 PE=4 SV=1	[more]

BLAST of MELO3C014436T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03965.1	4.5e-33	47.03	RING/U-box superfamily protein	[more]
AT4G22250.1	5.5e-31	46.33	RING/U-box superfamily protein	[more]
AT1G62370.1	1.4e-26	41.95	RING/U-box superfamily protein	[more]
AT3G25030.1	1.7e-24	38.86	RING/U-box superfamily protein	[more]
AT4G13100.2	7.9e-22	35.15	RING/U-box superfamily protein	[more]

BLAST of MELO3C014436T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097176\|ref\|XP_008449482.1\|	2.3e-95	100.00	PREDICTED: uncharacterized protein LOC103491356 [Cucumis melo]	[more]
gi\|700192764\|gb\|KGN47968.1\|	2.6e-91	95.86	hypothetical protein Csa_6G421620 [Cucumis sativus]	[more]
gi\|703153220\|ref\|XP_010110624.1\|	1.1e-52	61.27	hypothetical protein L484_004822 [Morus notabilis]	[more]
gi\|641835332\|gb\|KDO54310.1\|	2.0e-46	53.89	hypothetical protein CISIN_1g036555mg [Citrus sinensis]	[more]
gi\|567910675\|ref\|XP_006447651.1\|	2.6e-46	53.61	hypothetical protein CICLE_v10016774mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C014436	MELO3C014436	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C014436T1	MELO3C014436T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C014436T1.cds1	MELO3C014436T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 121..158 score: 4.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 121..159 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 108..162 score: 2.2
None	No IPR available	PANTHER	PTHR12183	UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN	coord: 1..169 score: 1.4
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 119..164 score: 1.0
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 112..166 score: 1.53