MELO3C014209T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014209T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	F-box protein
Location	chr8 : 29254017 .. 29255577 (-)
Sequence length	852

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACAACCTCTACCCTCACTTTCTTCTTCGCCGCCGCCGTGGGAGGTGATTCTTCTCGTCGCCGAACGGCTCGACCCCAAAACCCTGGCCACCGCCTCCTGCGTTTGCAAGTCTTGGTCCCTTTCCATGGCCTCCGACCATCTTTGGGAGCCTATTTTCACCGCTAATTTCCCTTCTCTCTTTAACCTTGCTAGCGCCCCGACCTCGTCACCACCTGTTTCCTTCCGCCGCCTCTTTGGCCTCGGCTACATTGCTGCCGCTCGTCGCCGTCCCGCTCAGTTGAAACCTACTCTTTCCCTCTCCGACCTCGTCTTTGTTATTAGTATTTCCTTCACCGACAAAGATCAGAGTATTATTGCTTGTGACGGAGTAAATAAAGAAGAAAAAGGTAACTTTTAGTGCTTTTGTACACATTGAGAAGCTACGTTACGTAACATGGGGTCCGTTGGGTTGATTTTAAGACTCTGGTAATATTTGTTTTTTCTTTTTTTTTAATTTAAGTGATCAAAATTTTTAAAAATGAAAATTGAAAAAATATTTACCATCATACAAAAAATATTTAAAAGGTAGTTTCTAATTTTTAAAAAAGCAAACATCATCGATGCATGCATCTCACCAGAAATTTTCAATTATAACGTTGACACGTCTCATACCGGGTGTGATGTCGCATGAACGCAAGTATTACCCATTTTTTATTTCGGTTTTAGTGGGTCTATCTCAACCTGAACTTTTCTCATGGAAGAAGTTAGAGAAATTATTTTATATGACAACTGTTAAAAATACTTTAGTAAAAATGATCAAATTGGTAAAGTGTTATTTTTTTTTTTCCTTTTTTACCATTTTGCTGTATACATGAAAAGAACCTGAGGAGTTATTGTTTGCAAGATTTCACATACGATCACATGTTTCTAAACAATTCACGTAATAAAAGACCTAAAAACATTCTCTCTTTTTTCCCGATAAAATCAATCCAAAAGTTTGAAAAGTAATTAACGTAGCTTTTATTTTTGTTTATTTATTTTGTTTATAACTGTACTAAAAAAAGCTAGCTAAAATTCGAATGTATATGTAATTCTTCATTCCATGAAAACTTGTAGCTCCGCGGCCACAATCCAGCCTCACCGTCGTGAAGCATGGTGAGGAGCTACCCGTGGAACGAAATGGACTATTCAAATTCGACATAAATCTCAACGAGAATGGGGCTGCTCCGGTGGTCATTGGAGCGAGAGAGGAGGTGGAGGTGGTATGGAACATAGTGTTAGAAGGGTGGAGGGGGGTATTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCGGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCGGGGTGCTGCCCGAACGCCGTGAGCGGCGGCATTGTGGGGGATTTGAGACTAGGGTTGTGTGGAAATGGAGGAGGGAGTAATAAGGTTAGGATTGAAAGTGTGAGTGTAGGGATGATGAGTGTTGTGAGTTGGAGATATGTGAGCTTAGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAATGCTAACGTCTAG

mRNA sequence

ATGGCACAACCTCTACCCTCACTTTCTTCTTCGCCGCCGCCGTGGGAGGTGATTCTTCTCGTCGCCGAACGGCTCGACCCCAAAACCCTGGCCACCGCCTCCTGCGTTTGCAAGTCTTGGTCCCTTTCCATGGCCTCCGACCATCTTTGGGAGCCTATTTTCACCGCTAATTTCCCTTCTCTCTTTAACCTTGCTAGCGCCCCGACCTCGTCACCACCTGTTTCCTTCCGCCGCCTCTTTGGCCTCGGCTACATTGCTGCCGCTCGTCGCCGTCCCGCTCAGTTGAAACCTACTCTTTCCCTCTCCGACCTCGTCTTTGTTATTAGTATTTCCTTCACCGACAAAGATCAGAGTATTATTGCTTGTGACGGAGTAAATAAAGAAGAAAAAGCTCCGCGGCCACAATCCAGCCTCACCGTCGTGAAGCATGGTGAGGAGCTACCCGTGGAACGAAATGGACTATTCAAATTCGACATAAATCTCAACGAGAATGGGGCTGCTCCGGTGGTCATTGGAGCGAGAGAGGAGGTGGAGGTGGTATGGAACATAGTGTTAGAAGGGTGGAGGGGGGTATTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCGGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCGGGGTGCTGCCCGAACGCCGTGAGCGGCGGCATTGTGGGGGATTTGAGACTAGGGTTGTGTGGAAATGGAGGAGGGAGTAATAAGGTTAGGATTGAAAGTGTGAGTGTAGGGATGATGAGTGTTGTGAGTTGGAGATATGTGAGCTTAGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAATGCTAACGTCTAG

Coding sequence (CDS)

ATGGCACAACCTCTACCCTCACTTTCTTCTTCGCCGCCGCCGTGGGAGGTGATTCTTCTCGTCGCCGAACGGCTCGACCCCAAAACCCTGGCCACCGCCTCCTGCGTTTGCAAGTCTTGGTCCCTTTCCATGGCCTCCGACCATCTTTGGGAGCCTATTTTCACCGCTAATTTCCCTTCTCTCTTTAACCTTGCTAGCGCCCCGACCTCGTCACCACCTGTTTCCTTCCGCCGCCTCTTTGGCCTCGGCTACATTGCTGCCGCTCGTCGCCGTCCCGCTCAGTTGAAACCTACTCTTTCCCTCTCCGACCTCGTCTTTGTTATTAGTATTTCCTTCACCGACAAAGATCAGAGTATTATTGCTTGTGACGGAGTAAATAAAGAAGAAAAAGCTCCGCGGCCACAATCCAGCCTCACCGTCGTGAAGCATGGTGAGGAGCTACCCGTGGAACGAAATGGACTATTCAAATTCGACATAAATCTCAACGAGAATGGGGCTGCTCCGGTGGTCATTGGAGCGAGAGAGGAGGTGGAGGTGGTATGGAACATAGTGTTAGAAGGGTGGAGGGGGGTATTTACAATGATTGAATGTGGAGGAAGAGTGGGAATGGCTCCGAGAGCGGACGGGTGGTTCTCGGAGGAGCTCCCGGCGGCGGGGTGCTGCCCGAACGCCGTGAGCGGCGGCATTGTGGGGGATTTGAGACTAGGGTTGTGTGGAAATGGAGGAGGGAGTAATAAGGTTAGGATTGAAAGTGTGAGTGTAGGGATGATGAGTGTTGTGAGTTGGAGATATGTGAGCTTAGATGATGGGTTAATGTATTTGCAACATTTTTTGTTCAATGCTAACGTCTAG

Protein sequence

MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV*

Homology

[Close]

BLAST of MELO3C014209T1 vs. Swiss-Prot
Match: FB336_ARATH (Probable F-box protein At5g04010 OS=Arabidopsis thaliana GN=NSFBx PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.3e-22
Identity = 81/273 (29.67%), Postives = 129/273 (47.25%), Query Frame = 1


Query: 11  SPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTS 70
           SPP WE++ LV   +DP++LA ASCV  +WS   +S+ LW+ +  A   S+F  A     
Sbjct: 51  SPPSWEILCLVGPYMDPESLAVASCVSTTWSKCFSSEDLWKSL-PATRHSIFAKAITKEG 110

Query: 71  SPP--VSFRRLFGLGYIAAARRRPAQ-LKPTLSLSDLVFVISISFTDKDQSIIACDGVNK 130
           + P  +S++RL      AA RRR  Q  +P +SLSDLVF++ +S   K+           
Sbjct: 111 AKPAWLSYKRLISEAESAAKRRRNNQPAEPKISLSDLVFIVHVSAGSKE----------- 170

Query: 131 EEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEG 190
                       VVK G++L    N  F+ + ++ ++G         ++V + WN+VL  
Sbjct: 171 ----------AVVVKQGKDLVFGSNERFQIEADVRDSG----FTADMKDVSMSWNVVLRN 230

Query: 191 WRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGG--IVGDLRLGLCGNGGGSN 250
           +  +F M E    +       GWF++ELP      N    G  +VG+++          N
Sbjct: 231 YERMFLMSET--VIKSLDSMIGWFTDELPGT---KNRYCDGSNLVGEVKPSF-------N 285

Query: 251 KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
           +  ++ V   +    +W+ + +DD L YLQ FL
Sbjct: 291 EDVLDKVVFAIADSRNWKSLFVDDVLRYLQCFL 285

[Close]

BLAST of MELO3C014209T1 vs. TrEMBL
Match: A0A0A0LDE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G497390 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.4e-152
Identity = 269/284 (94.72%), Postives = 276/284 (97.18%), Query Frame = 1


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60

Query: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
           LFNLA+AP +SP VSFRRLFGLGYIAAARRRPAQ KP+LSLSDLVFVISISFT+KD+  I
Sbjct: 61  LFNLATAPATSPHVSFRRLFGLGYIAAARRRPAQSKPSLSLSDLVFVISISFTNKDRCSI 120

Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENG-AAPVVIGAREEVEV 180
           ACDGVNKEEKAPRPQSSLT+VKHGEELPV+RNGLFKFDINLNENG  APVVIGAREEVEV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTIVKHGEELPVDRNGLFKFDINLNENGDGAPVVIGAREEVEV 180

Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCG 240
           VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPN VSGGIVGDLRLGLCG
Sbjct: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNVVSGGIVGDLRLGLCG 240

Query: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
           NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284

[Close]

BLAST of MELO3C014209T1 vs. TrEMBL
Match: A0A067KU33_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10845 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.9e-61
Identity = 123/270 (45.56%), Postives = 176/270 (65.19%), Query Frame = 1


Query: 9   SSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAP 68
           +S PPPWEVI+LVA  LDPK LA ASCV KSW +SM++DH+W+P+   ++PSL  L  A 
Sbjct: 15  TSPPPPWEVIVLVAHHLDPKALARASCVSKSWYISMSTDHIWQPLCATHYPSLSQLKFA- 74

Query: 69  TSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIACDGVNKE 128
              P +S+RRL+ +  IAA+RR     KP +SL +L+FVI++S                 
Sbjct: 75  --DPSISYRRLYAMASIAASRRVKKPNKPQISLENLIFVINLS----------------T 134

Query: 129 EKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEGW 188
           +      S++++ K G EL + R  +F+FDI++       V+    E++++ WN++L+GW
Sbjct: 135 KNHLHLHSTVSIAKPGVELDI-RQEVFRFDIDVCYKNKYEVL----EDMKISWNLILKGW 194

Query: 189 RGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGNGGGSNKVR 248
             VFTM++C G+V      DGWFSEELP+ GCC    S G+V DL+LG C  GGG  +VR
Sbjct: 195 SRVFTMMDCEGKVRFGLGVDGWFSEELPSPGCCSGGYSSGLVADLKLGFC--GGGKREVR 254

Query: 249 IESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
           ++ VSVG++++V+WRYVS+DDGL YLQHFL
Sbjct: 255 VDKVSVGILNIVNWRYVSIDDGLRYLQHFL 258

[Close]

BLAST of MELO3C014209T1 vs. TrEMBL
Match: A0A0S3SU83_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G323800 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.5e-61
Identity = 131/273 (47.99%), Postives = 171/273 (62.64%), Query Frame = 1


Query: 11  SPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTS 70
           SPPPWE ++LVA  LDPKTL  ASCV KSW  SM+SDH+W+P+ T  FPSL  L+SA   
Sbjct: 2   SPPPWEALILVATYLDPKTLTIASCVSKSWFSSMSSDHVWKPLLTTQFPSLAILSSA--- 61

Query: 71  SPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIACDGVNKEEK 130
              V++RRLF +G+ AAARR     KP+LSL DLVF +S+S  D    ++A         
Sbjct: 62  ---VAYRRLFVMGHAAAARRSQRPPKPSLSLEDLVFSVSVSTRD---GVVASG------- 121

Query: 131 APRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEGWRG 190
                     V+ GE L +E  G+F+F +  +      V+    EEV V WN+VL+GW G
Sbjct: 122 ----------VRAGETLRMETAGVFRFGVGCD---GGVVLKEGEEEVRVTWNVVLKGWGG 181

Query: 191 VFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGNGGGSNKVRIE 250
           VFT +E  G+V +    +GWF EELPA GCC  AV+  +VGDL++G+C   GG N VR+E
Sbjct: 182 VFTAVEREGKVRLVGGGEGWFWEELPAPGCCSVAVASALVGDLKVGMCEEKGG-NGVRVE 241

Query: 251 SVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
            V VG++ VV WRYVS++DGL Y QHFL   +V
Sbjct: 242 EVGVGILRVVDWRYVSVEDGLRYFQHFLLTNHV 244

[Close]

BLAST of MELO3C014209T1 vs. TrEMBL
Match: V7BI28_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G249000g PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.3e-61
Identity = 131/268 (48.88%), Postives = 169/268 (63.06%), Query Frame = 1


Query: 11  SPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTS 70
           SPPPWE ++LVA  LDPKTL  ASCV KSW  SM+SDH+W+P+ T +FPSL  L+SA   
Sbjct: 2   SPPPWEALVLVATYLDPKTLTIASCVSKSWLSSMSSDHVWKPVLTTHFPSLATLSSA--- 61

Query: 71  SPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIACDGVNKEEK 130
              VS+RRLF +G+ AAARR     KP+LSL DLVF +S+S  D    ++A         
Sbjct: 62  ---VSYRRLFAMGHAAAARRNQKPPKPSLSLEDLVFAVSVSTRD---GVVASG------- 121

Query: 131 APRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEGWRG 190
                     V+ GE L VE  G+ +F +   E G   V+    EEV V WN+VL+GW G
Sbjct: 122 ----------VRAGETLRVEAAGVCRFGVGC-EGG---VLKEGEEEVRVTWNVVLKGWGG 181

Query: 191 VFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGNGGGSNKVRIE 250
           V TM+E  G+V +    +GWF +ELPA GCC  AV+  +VGDLR+G+C    G   VR+E
Sbjct: 182 VLTMVESEGKVRLVGGGEGWFWQELPAQGCCSGAVASAMVGDLRVGMCEEKDGG--VRVE 237

Query: 251 SVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
            V+VG++ VV WRYVS++DGL Y QHFL
Sbjct: 242 EVTVGILRVVDWRYVSVEDGLRYFQHFL 237

[Close]

BLAST of MELO3C014209T1 vs. TrEMBL
Match: I1JGE4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G191900 PE=4 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 7.3e-61
Identity = 132/271 (48.71%), Postives = 169/271 (62.36%), Query Frame = 1


Query: 11  SPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTS 70
           SPPPWE ++LVA  LDPKTLA ASCV KSW  SM+SD +W+PI   +FPSL  L   P+S
Sbjct: 2   SPPPWEALILVATYLDPKTLAMASCVSKSWFSSMSSDIIWKPILATHFPSLSTL---PSS 61

Query: 71  SPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIA--CDGVNKE 130
           +P V++RRLF +G+ A   R     KP+LSL DLVF +SI   D +   IA  CD     
Sbjct: 62  APTVAYRRLFSMGHTATTHRLRGPSKPSLSLGDLVFAVSICTRDSNIVSIASPCDA---- 121

Query: 131 EKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEGW 190
                             L V+  G+F+F +  +  GA  V+    EEV + WN+VL GW
Sbjct: 122 ------------------LRVDAPGVFRFGVGCD--GA--VLREGVEEVRMAWNVVLRGW 181

Query: 191 RGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGNGGGS-NKV 250
           RGVFTM+E  G+VG AP  +GWFS+ELPA GCC  AV   +V DL++ +CG    + N V
Sbjct: 182 RGVFTMMERVGKVGFAPGGEGWFSQELPAPGCCSGAVESAVVADLKVRMCGGEDKNVNGV 241

Query: 251 RIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
           R+  VSVG++SVV WRYV ++DGL YLQHFL
Sbjct: 242 RVNEVSVGILSVVDWRYVRVEDGLRYLQHFL 243

[Close]

BLAST of MELO3C014209T1 vs. TAIR10
Match: AT5G04010.1 (AT5G04010.1 F-box family protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-23
Identity = 81/273 (29.67%), Postives = 129/273 (47.25%), Query Frame = 1


Query: 11  SPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLASAPTS 70
           SPP WE++ LV   +DP++LA ASCV  +WS   +S+ LW+ +  A   S+F  A     
Sbjct: 51  SPPSWEILCLVGPYMDPESLAVASCVSTTWSKCFSSEDLWKSL-PATRHSIFAKAITKEG 110

Query: 71  SPP--VSFRRLFGLGYIAAARRRPAQ-LKPTLSLSDLVFVISISFTDKDQSIIACDGVNK 130
           + P  +S++RL      AA RRR  Q  +P +SLSDLVF++ +S   K+           
Sbjct: 111 AKPAWLSYKRLISEAESAAKRRRNNQPAEPKISLSDLVFIVHVSAGSKE----------- 170

Query: 131 EEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVLEG 190
                       VVK G++L    N  F+ + ++ ++G         ++V + WN+VL  
Sbjct: 171 ----------AVVVKQGKDLVFGSNERFQIEADVRDSG----FTADMKDVSMSWNVVLRN 230

Query: 191 WRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGG--IVGDLRLGLCGNGGGSN 250
           +  +F M E    +       GWF++ELP      N    G  +VG+++          N
Sbjct: 231 YERMFLMSET--VIKSLDSMIGWFTDELPGT---KNRYCDGSNLVGEVKPSF-------N 285

Query: 251 KVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
           +  ++ V   +    +W+ + +DD L YLQ FL
Sbjct: 291 EDVLDKVVFAIADSRNWKSLFVDDVLRYLQCFL 285

[Close]

BLAST of MELO3C014209T1 vs. NCBI nr
Match: gi|659096654|ref|XP_008449214.1| (PREDICTED: probable F-box protein At5g04010 [Cucumis melo])

HSP 1 Score: 574.7 bits (1480), Expect = 8.9e-161
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60

Query: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
           LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII
Sbjct: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120

Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180
           ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVV 180

Query: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240
           WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN
Sbjct: 181 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCGN 240

Query: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
           GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 GGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 283

[Close]

BLAST of MELO3C014209T1 vs. NCBI nr
Match: gi|700202953|gb|KGN58086.1| (hypothetical protein Csa_3G497390 [Cucumis sativus])

HSP 1 Score: 546.2 bits (1406), Expect = 3.4e-152
Identity = 269/284 (94.72%), Postives = 276/284 (97.18%), Query Frame = 1


Query: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60
           MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS
Sbjct: 1   MAQPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPS 60

Query: 61  LFNLASAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSII 120
           LFNLA+AP +SP VSFRRLFGLGYIAAARRRPAQ KP+LSLSDLVFVISISFT+KD+  I
Sbjct: 61  LFNLATAPATSPHVSFRRLFGLGYIAAARRRPAQSKPSLSLSDLVFVISISFTNKDRCSI 120

Query: 121 ACDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENG-AAPVVIGAREEVEV 180
           ACDGVNKEEKAPRPQSSLT+VKHGEELPV+RNGLFKFDINLNENG  APVVIGAREEVEV
Sbjct: 121 ACDGVNKEEKAPRPQSSLTIVKHGEELPVDRNGLFKFDINLNENGDGAPVVIGAREEVEV 180

Query: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCG 240
           VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPN VSGGIVGDLRLGLCG
Sbjct: 181 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNVVSGGIVGDLRLGLCG 240

Query: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284
           NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV
Sbjct: 241 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNANV 284

[Close]

BLAST of MELO3C014209T1 vs. NCBI nr
Match: gi|1012036867|ref|XP_015953374.1| (PREDICTED: probable F-box protein At5g04010 [Arachis duranensis])

HSP 1 Score: 266.5 bits (680), Expect = 5.2e-68
Identity = 138/274 (50.36%), Postives = 179/274 (65.33%), Query Frame = 1


Query: 6   PSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLA 65
           PS + SPPPWEV++LVA  LDPKTLA ASCV  SWS SM+SDHLW P  TA+FPSL NL 
Sbjct: 5   PSATLSPPPWEVLVLVAHYLDPKTLAIASCVSNSWSSSMSSDHLWIPFLTAHFPSLSNLP 64

Query: 66  SAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIACDGV 125
           S  +S+  VS RRLFG+G+ A  RRR    K  LSL+DLVF +SIS  D           
Sbjct: 65  S--SSADAVSCRRLFGIGHSAVKRRRKNPTKLKLSLADLVFAVSISSAD----------- 124

Query: 126 NKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVL 185
                     S  +V K GE L ++  G+F+FD+    +GAA  V  + +EV++ WN++L
Sbjct: 125 ---------SSVFSVTKSGESLVMDPPGVFRFDVGFGSDGAA--VEESLKEVKITWNVIL 184

Query: 186 EGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGL-CGNGGGS 245
           +GWR VFTM+ C G++     A+GWFS+ELPA GCC +AV   +V D+ +GL CG    +
Sbjct: 185 KGWREVFTMMSCKGKINFVAGAEGWFSKELPAPGCCSSAVGSAVVADMYVGLMCGGKRSN 244

Query: 246 NKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
            KV++  VSVG++SVV WRY+S+ DGL YLQHFL
Sbjct: 245 GKVKVNKVSVGILSVVDWRYISVQDGLRYLQHFL 254

[Close]

BLAST of MELO3C014209T1 vs. NCBI nr
Match: gi|1021487145|ref|XP_016186560.1| (PREDICTED: probable F-box protein At5g04010 [Arachis ipaensis])

HSP 1 Score: 264.2 bits (674), Expect = 2.6e-67
Identity = 137/274 (50.00%), Postives = 179/274 (65.33%), Query Frame = 1


Query: 6   PSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNLA 65
           PS + SPPPWEV++LVA+ LDPKTLA ASCV  SWS SM+SDHLW P  TA+FPSL NL 
Sbjct: 5   PSATLSPPPWEVLVLVAQYLDPKTLAIASCVSNSWSSSMSSDHLWIPFLTAHFPSLSNLP 64

Query: 66  SAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIACDGV 125
           S  +S+  VS RRLFG+G+ A  RRR    K  LSL+DLVF +SIS  D           
Sbjct: 65  S--SSADAVSCRRLFGIGHSAVKRRRKNPTKLKLSLADLVFAVSISSAD----------- 124

Query: 126 NKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNENGAAPVVIGAREEVEVVWNIVL 185
                     S  +V K GE L ++  G+F+F +    +GAA  V  + +EV++ WN++L
Sbjct: 125 ---------SSVFSVTKPGESLVMDPPGVFRFAVGFGSDGAA--VEESVKEVKITWNVIL 184

Query: 186 EGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGL-CGNGGGS 245
           +GWR VFTM+ C G++     A+GWFS+ELPA GCC +AV   +V D+ +GL CG    +
Sbjct: 185 KGWREVFTMMSCKGKINFVAGAEGWFSKELPAPGCCSSAVGSAVVADMNVGLTCGEKRSN 244

Query: 246 NKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
            KV++  VSVG++SVV WRY+S+ DGL YLQHFL
Sbjct: 245 GKVKVNKVSVGILSVVDWRYISVQDGLRYLQHFL 254

[Close]

BLAST of MELO3C014209T1 vs. NCBI nr
Match: gi|1009159897|ref|XP_015898063.1| (PREDICTED: probable F-box protein At5g04010 [Ziziphus jujuba])

HSP 1 Score: 256.5 bits (654), Expect = 5.4e-65
Identity = 139/284 (48.94%), Postives = 189/284 (66.55%), Query Frame = 1


Query: 5   LPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLFNL 64
           LP     PPPWEV++LV+ RLDPKTLA ASCVCKSWS+SM+SDHLW+PI   +FPSL NL
Sbjct: 9   LPPPLPPPPPWEVMVLVSHRLDPKTLAIASCVCKSWSISMSSDHLWKPICANHFPSLSNL 68

Query: 65  ASAPTSSPPVSFRRLFGLGYIAAARRRPAQL--KPTLSLSDLVFVISISFTDKDQSIIAC 124
                  P VS+RRL+   + ++  R   +   KP LSL+DL+F ++I    K     +C
Sbjct: 69  ------HPTVSYRRLYATAHSSSKHRLQLKTPSKPRLSLADLIFAVNI--VPK-----SC 128

Query: 125 DGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINLNE--NGAAPVVIGAREEVEVV 184
              N          +LTV   G+EL V+ N +FKFD+ +N+  +   P ++ A EEV++ 
Sbjct: 129 CNSN--------MVALTVT--GDELAVDPNEVFKFDLQVNDYYDDERPCMLEAMEEVKIS 188

Query: 185 WNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPN--AVSGGIVGDLRLGLC 244
           WNIVL+GWRGVFTM++C G+V  +P  DGWFS ELP AGCC +  + + GIV DL++G C
Sbjct: 189 WNIVLKGWRGVFTMMDCHGKVSFSPGGDGWFSGELPPAGCCCSIGSTTSGIVADLKVGYC 248

Query: 245 ----GNGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFL 279
                + G + KVRIE VS+G+++V++WRYV+L+DGL YLQHFL
Sbjct: 249 TRRGNSSGAAGKVRIEKVSLGILNVLNWRYVTLEDGLRYLQHFL 269

The following BLAST results are available for this feature:

BLAST of MELO3C014209T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB336_ARATH	3.3e-22	29.67	Probable F-box protein At5g04010 OS=Arabidopsis thaliana GN=NSFBx PE=2 SV=1	[more]

BLAST of MELO3C014209T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDE5_CUCSA	2.4e-152	94.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G497390 PE=4 SV=1	[more]
A0A067KU33_JATCU	1.9e-61	45.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10845 PE=4 SV=1	[more]
A0A0S3SU83_PHAAN	2.5e-61	47.99	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G323800 PE=...	[more]
V7BI28_PHAVU	4.3e-61	48.88	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G249000g PE=4 SV=1	[more]
I1JGE4_SOYBN	7.3e-61	48.71	Uncharacterized protein OS=Glycine max GN=GLYMA_02G191900 PE=4 SV=2	[more]

BLAST of MELO3C014209T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G04010.1	1.9e-23	29.67	F-box family protein	[more]

BLAST of MELO3C014209T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096654\|ref\|XP_008449214.1\|	8.9e-161	100.00	PREDICTED: probable F-box protein At5g04010 [Cucumis melo]	[more]
gi\|700202953\|gb\|KGN58086.1\|	3.4e-152	94.72	hypothetical protein Csa_3G497390 [Cucumis sativus]	[more]
gi\|1012036867\|ref\|XP_015953374.1\|	5.2e-68	50.36	PREDICTED: probable F-box protein At5g04010 [Arachis duranensis]	[more]
gi\|1021487145\|ref\|XP_016186560.1\|	2.6e-67	50.00	PREDICTED: probable F-box protein At5g04010 [Arachis ipaensis]	[more]
gi\|1009159897\|ref\|XP_015898063.1\|	5.4e-65	48.94	PREDICTED: probable F-box protein At5g04010 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C014209	MELO3C014209	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C014209T1	MELO3C014209T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C014209T1.cds2	MELO3C014209T1.cds2	CDS
MELO3C014209T1.cds1	MELO3C014209T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 14..51 score: 7.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 14..66 score: 1.96
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 14..64 score: 2.
None	No IPR available	PANTHER	PTHR12874	FAMILY NOT NAMED	coord: 7..282 score: 4.4
None	No IPR available	PANTHER	PTHR12874:SF11	SUBFAMILY NOT NAMED	coord: 7..282 score: 4.4