MELO3C013386.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCACATTTCCAAACTGTTCTATCTTCCATTCAAACATAAATTGAAACAAGACTTGTAGAATCAGTATACAGTTTTCCATCATGGGTATTCGTCTGCCTGGTGTTGTTAATGCCAAAAAAATTCTCCATAGGATTCACAATTCAGATTCGATTCCAAAAGGTCACTTGGCTGTTTATGTTGGAGAAACACAGAGGAAGCGCTTTGTTGTACCTGTTTCTTACTTAAGTCATCCTTCTTTTAAGACATTGTTGAGTCAGGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACTCAAAGTTTGAATGGCTCATGATTCTCCACGTGGCTAGATTTAGTTTAGAAAAATAGACAGAAGATTAGGGCCAACAATTTTGTCAATTCATCTTTCAGTTATTGTATAGCTCATTCTTTTGGTTTAAGGAAACTGAATAAAGAAATTACTCAATGCACATACTTTGGTTGGAAGTCCTCCCTTTATTAGTTGTCCATAAATTAAGGAATATCAGAAAAAACAGTTAAATTTGTG ACCACATTTCCAAACTGTTCTATCTTCCATTCAAACATAAATTGAAACAAGACTTGTAGAATCAGTATACAGTTTTCCATCATGGGTATTCGTCTGCCTGGTGTTGTTAATGCCAAAAAAATTCTCCATAGGATTCACAATTCAGATTCGATTCCAAAAGGTCACTTGGCTGTTTATGTTGGAGAAACACAGAGGAAGCGCTTTGTTGTACCTGTTTCTTACTTAAGTCATCCTTCTTTTAAGACATTGTTGAGTCAGGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACTCAAAGTTTGAATGGCTCATGATTCTCCACGTGGCTAGATTTAGTTTAGAAAAATAGACAGAAGATTAGGGCCAACAATTTTGTCAATTCATCTTTCAGTTATTGTATAGCTCATTCTTTTGGTTTAAGGAAACTGAATAAAGAAATTACTCAATGCACATACTTTGGTTGGAAGTCCTCCCTTTATTAGTTGTCCATAAATTAAGGAATATCAGAAAAAACAGTTAAATTTGTG ATGGGTATTCGTCTGCCTGGTGTTGTTAATGCCAAAAAAATTCTCCATAGGATTCACAATTCAGATTCGATTCCAAAAGGTCACTTGGCTGTTTATGTTGGAGAAACACAGAGGAAGCGCTTTGTTGTACCTGTTTCTTACTTAAGTCATCCTTCTTTTAAGACATTGTTGAGTCAGGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACTCAAAGTTTGAATGGCTCATGA MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS
BLAST of MELO3C013386.2.1 vs. NCBI nr
Match: XP_008448002.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]) HSP 1 Score: 193.7 bits (491), Expect = 2.7e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. NCBI nr
Match: XP_004144829.1 (PREDICTED: auxin-induced protein X15-like [Cucumis sativus] >KGN43214.1 hypothetical protein Csa_7G009100 [Cucumis sativus]) HSP 1 Score: 187.6 bits (475), Expect = 1.9e-44 Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. NCBI nr
Match: XP_022136191.1 (auxin-induced protein X15-like [Momordica charantia]) HSP 1 Score: 162.5 bits (410), Expect = 6.6e-37 Identity = 79/93 (84.95%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. NCBI nr
Match: XP_019055014.1 (PREDICTED: auxin-responsive protein SAUR23-like [Nelumbo nucifera]) HSP 1 Score: 142.1 bits (357), Expect = 9.3e-31 Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. NCBI nr
Match: XP_010271402.1 (PREDICTED: auxin-induced protein X10A-like [Nelumbo nucifera]) HSP 1 Score: 141.4 bits (355), Expect = 1.6e-30 Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TAIR10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 114.0 bits (284), Expect = 4.9e-26 Identity = 55/90 (61.11%), Postives = 69/90 (76.67%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TAIR10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.8 bits (281), Expect = 1.1e-25 Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TAIR10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.8 bits (281), Expect = 1.1e-25 Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TAIR10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 1.4e-25 Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TAIR10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.1 bits (279), Expect = 1.9e-25 Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. Swiss-Prot
Match: sp|Q9FJF9|SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.0e-24 Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. Swiss-Prot
Match: sp|Q9FK62|SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.6e-24 Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. Swiss-Prot
Match: sp|Q9FJG1|SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 5.7e-24 Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. Swiss-Prot
Match: sp|Q9FJG0|SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23 Identity = 51/80 (63.75%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. Swiss-Prot
Match: sp|P33081|AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23 Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TrEMBL
Match: tr|A0A1S3BIQ0|A0A1S3BIQ0_CUCME (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103490317 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.8e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TrEMBL
Match: tr|A0A0A0K2G3|A0A0A0K2G3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009100 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.3e-44 Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TrEMBL
Match: tr|A0A1U8Q893|A0A1U8Q893_NELNU (auxin-responsive protein SAUR23-like OS=Nelumbo nucifera OX=4432 GN=LOC104607462 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 6.1e-31 Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TrEMBL
Match: tr|A0A1U8B690|A0A1U8B690_NELNU (auxin-induced protein X10A-like OS=Nelumbo nucifera OX=4432 GN=LOC104607463 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.0e-30 Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = 0
BLAST of MELO3C013386.2.1 vs. TrEMBL
Match: tr|A0A1U8PYK8|A0A1U8PYK8_NELNU (auxin-responsive protein SAUR23-like OS=Nelumbo nucifera OX=4432 GN=LOC104587994 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 6.8e-30 Identity = 69/103 (66.99%), Postives = 82/103 (79.61%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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