MELO3C013270.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013270.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Eukaryotic translation initiation factor 3 subunit A, putative
Location	chr01 : 15799013 .. 15799950 (+)
Sequence length	938

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAACTCAAATTGCCTAGATTGATTGGTAATTCAATTTTTAGGCATTTGTCTTCTCTAATCAAAGAAGGAAGATGGATGCCTCTACTTTGAACCCAAGAAACTCTCAGCATGTTCGTTCGAAGAGTGAGCCCTCAAATCCACACCCAATCATCAGCCAAGTTAATGAGCAATTGAGAAGATTAAGGCCGGACTCTGAAACCACATCTTCTTCTTCTCTTTGCCATAGACTTGGCGCCCTTCAAGATTTGTATGATGGTGTTGATAAGTTGCTTGTTTTGCTGAACTCCCAACAAGCTTTGGCTCAACAAAGTAATAAGGAAGTGCTAGATGACTTAATAGAAGGATCACTCATGCTGCTGGATTTGTGTGATACAGCTAAGAATGGATTGTTGCAAACTAGAGAATGCATACATGAACTAGAGTCTATTTTGCGTAGAAAGAGAGGTGAAATTTGTACTTCTAGTTCACTTCAGAAATCAAGGAAGATGATAAAGAAAACAATCCAAAAATCCTTGAAAGGAATGGAAGGCGAACATTTCCACAAAGTTCATGGTAGCTTGACTATTGTCAACTTGATAAAAGAGGTTGAAGCAATCACATACCACTGTATGGAATCCTTGTTGTCCTTTATAGCAGGACCGAAGTTAGCATCAAAATGGAGCTGCTGGTCGTCGGTTTCCAAGTTTGTGCAACCGAAAAGAGTAGCCTGCATAAGCGAAGAAACAGATATAAGTGAAATAGAAAGATTGGACTTGGCATTAAGTTCATTTACCAATCATCAAAGTAACAAAGAACTCCAAATTCAAGATGAAGACATGCAGAACTTGCTGAGAGAGTGTGGGGCAAGCATTAAGGAAGTTGAAGAAGAACTTGATAGTCTTTATAGGTTTATAATCAAAACAAGAGTATCTCTTCTTAACATCCTCAACAACTAA

mRNA sequence

AACAAACTCAAATTGCCTAGATTGATTGGTAATTCAATTTTTAGGCATTTGTCTTCTCTAATCAAAGAAGGAAGATGGATGCCTCTACTTTGAACCCAAGAAACTCTCAGCATGTTCGTTCGAAGAGTGAGCCCTCAAATCCACACCCAATCATCAGCCAAGTTAATGAGCAATTGAGAAGATTAAGGCCGGACTCTGAAACCACATCTTCTTCTTCTCTTTGCCATAGACTTGGCGCCCTTCAAGATTTGTATGATGGTGTTGATAAGTTGCTTGTTTTGCTGAACTCCCAACAAGCTTTGGCTCAACAAAGTAATAAGGAAGTGCTAGATGACTTAATAGAAGGATCACTCATGCTGCTGGATTTGTGTGATACAGCTAAGAATGGATTGTTGCAAACTAGAGAATGCATACATGAACTAGAGTCTATTTTGCGTAGAAAGAGAGGTGAAATTTGTACTTCTAGTTCACTTCAGAAATCAAGGAAGATGATAAAGAAAACAATCCAAAAATCCTTGAAAGGAATGGAAGGCGAACATTTCCACAAAGTTCATGGTAGCTTGACTATTGTCAACTTGATAAAAGAGGTTGAAGCAATCACATACCACTGTATGGAATCCTTGTTGTCCTTTATAGCAGGACCGAAGTTAGCATCAAAATGGAGCTGCTGGTCGTCGGTTTCCAAGTTTGTGCAACCGAAAAGAGTAGCCTGCATAAGCGAAGAAACAGATATAAGTGAAATAGAAAGATTGGACTTGGCATTAAGTTCATTTACCAATCATCAAAGTAACAAAGAACTCCAAATTCAAGATGAAGACATGCAGAACTTGCTGAGAGAGTGTGGGGCAAGCATTAAGGAAGTTGAAGAAGAACTTGATAGTCTTTATAGGTTTATAATCAAAACAAGAGTATCTCTTCTTAACATCCTCAACAACTAA

Coding sequence (CDS)

ATGGATGCCTCTACTTTGAACCCAAGAAACTCTCAGCATGTTCGTTCGAAGAGTGAGCCCTCAAATCCACACCCAATCATCAGCCAAGTTAATGAGCAATTGAGAAGATTAAGGCCGGACTCTGAAACCACATCTTCTTCTTCTCTTTGCCATAGACTTGGCGCCCTTCAAGATTTGTATGATGGTGTTGATAAGTTGCTTGTTTTGCTGAACTCCCAACAAGCTTTGGCTCAACAAAGTAATAAGGAAGTGCTAGATGACTTAATAGAAGGATCACTCATGCTGCTGGATTTGTGTGATACAGCTAAGAATGGATTGTTGCAAACTAGAGAATGCATACATGAACTAGAGTCTATTTTGCGTAGAAAGAGAGGTGAAATTTGTACTTCTAGTTCACTTCAGAAATCAAGGAAGATGATAAAGAAAACAATCCAAAAATCCTTGAAAGGAATGGAAGGCGAACATTTCCACAAAGTTCATGGTAGCTTGACTATTGTCAACTTGATAAAAGAGGTTGAAGCAATCACATACCACTGTATGGAATCCTTGTTGTCCTTTATAGCAGGACCGAAGTTAGCATCAAAATGGAGCTGCTGGTCGTCGGTTTCCAAGTTTGTGCAACCGAAAAGAGTAGCCTGCATAAGCGAAGAAACAGATATAAGTGAAATAGAAAGATTGGACTTGGCATTAAGTTCATTTACCAATCATCAAAGTAACAAAGAACTCCAAATTCAAGATGAAGACATGCAGAACTTGCTGAGAGAGTGTGGGGCAAGCATTAAGGAAGTTGAAGAAGAACTTGATAGTCTTTATAGGTTTATAATCAAAACAAGAGTATCTCTTCTTAACATCCTCAACAACTAA

Protein sequence

MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLYDGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEICTSSSLQKSRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCMESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNKELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN

Homology

[Close]

BLAST of MELO3C013270.2.1 vs. NCBI nr
Match: XP_008447874.1 (PREDICTED: uncharacterized protein LOC103490228 [Cucumis melo])

HSP 1 Score: 550.8 bits (1418), Expect = 2.7e-153
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLY 60
           MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLY
Sbjct: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLY 60

Query: 61  DGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESIL 120
           DGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESIL
Sbjct: 61  DGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESIL 120

Query: 121 RRKRGEICTSSSLQKSRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCM 180
           RRKRGEICTSSSLQKSRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCM
Sbjct: 121 RRKRGEICTSSSLQKSRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCM 180

Query: 181 ESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNK 240
           ESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNK
Sbjct: 181 ESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNK 240

Query: 241 ELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 288
           ELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN
Sbjct: 241 ELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 287

[Close]

BLAST of MELO3C013270.2.1 vs. NCBI nr
Match: KGN43321.1 (hypothetical protein Csa_7G023950 [Cucumis sativus])

HSP 1 Score: 503.1 bits (1294), Expect = 6.5e-139
Identity = 265/287 (92.33%), Postives = 270/287 (94.08%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLY 60
           MDASTLNPRNSQHVRSKSE SNPHPIISQVNEQLRRLRPDSE T SSSLCHRLGALQDLY
Sbjct: 1   MDASTLNPRNSQHVRSKSENSNPHPIISQVNEQLRRLRPDSEAT-SSSLCHRLGALQDLY 60

Query: 61  DGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESIL 120
           DGVDKLLVL NSQ AL QQSN+EV DDL+EGSLMLLDLCDTAKNGLLQTRECIHELESIL
Sbjct: 61  DGVDKLLVLPNSQNALVQQSNEEVFDDLLEGSLMLLDLCDTAKNGLLQTRECIHELESIL 120

Query: 121 RRKRGEICTSSSLQKSRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCM 180
           RRKRGEICTSSSL KSRKMIKKTIQK+LKGMEGE FHKVHGSLTIVNLIKEVEAITYH +
Sbjct: 121 RRKRGEICTSSSLHKSRKMIKKTIQKALKGMEGEPFHKVHGSLTIVNLIKEVEAITYHSL 180

Query: 181 ESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNK 240
           ESLLSFIAGPKL SKWSCWSSVS  VQPKRVACISEETDIS +ERLDLALSSFTNHQSNK
Sbjct: 181 ESLLSFIAGPKLPSKWSCWSSVSMLVQPKRVACISEETDISVVERLDLALSSFTNHQSNK 240

Query: 241 ELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 288
           E QIQDEDMQNLLRECGASIKEVEEELD LYRFIIKTRVSLLNI NN
Sbjct: 241 EFQIQDEDMQNLLRECGASIKEVEEELDGLYRFIIKTRVSLLNIFNN 286

[Close]

BLAST of MELO3C013270.2.1 vs. NCBI nr
Match: XP_022136177.1 (uncharacterized protein LOC111007932 [Momordica charantia])

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 221/293 (75.43%), Postives = 246/293 (83.96%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETT--SSSSLCHRLGALQD 60
           MDAS LNPR S HVRS S PS PHP+I+QV+EQL RLR DSE T  SSSSLCHRLGALQD
Sbjct: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLR-DSEATSSSSSSLCHRLGALQD 60

Query: 61  LYDGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELES 120
           L+D +DKLL+L  SQQAL Q S+KE+LDDL+EGSL LLD CD A N LLQTREC +ELES
Sbjct: 61  LHDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELES 120

Query: 121 ILRRKRGEICTSSSLQK---SRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAI 180
            LRR+RGEI T+SSLQ+   SRKMIKK I K+LKGME +  HK HGSLTIVNL+KEVEA+
Sbjct: 121 FLRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAV 180

Query: 181 TYHCMESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTN 240
           TYH +ESLLSFIAGPK+ SKWSCWSSVSKFVQPKRVACISEET+IS +ERLDL LSS TN
Sbjct: 181 TYHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITN 240

Query: 241 HQSNKELQ-IQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 288
           H +NK    IQ EDMQN LRECG SIKEVEEEL++LYRFIIKTRVSLLNI N+
Sbjct: 241 HHTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 292

[Close]

BLAST of MELO3C013270.2.1 vs. NCBI nr
Match: XP_004144945.1 (PREDICTED: uncharacterized protein LOC101212326 [Cucumis sativus] >KGN43323.1 hypothetical protein Csa_7G023970 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 6.3e-102
Identity = 211/291 (72.51%), Postives = 239/291 (82.13%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSE--TTSSSSLCHRLGALQD 60
           MDASTLN RNSQHVRSKS PSNPHPIISQV+EQL RLR DSE  ++SSSSLCH+L ALQD
Sbjct: 1   MDASTLNQRNSQHVRSKSVPSNPHPIISQVDEQLSRLR-DSEAISSSSSSLCHKLSALQD 60

Query: 61  LYDGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELES 120
           L+D VDKLL+L  SQQAL Q S+KE LD+L+EGSL LLDLCDTAK  L+QTREC HE ES
Sbjct: 61  LHDSVDKLLILPLSQQALVQVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFES 120

Query: 121 ILRRKRGEICTSSSLQK---SRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAI 180
           +LRR+R +I TSSSL+K   SRK+IKK I K LKGME +  +K   S T VN IKEVEA+
Sbjct: 121 VLRRRRSDIGTSSSLKKCLSSRKLIKKAIHKVLKGMESKQTNKDSESFTFVNQIKEVEAV 180

Query: 181 TYHCMESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTN 240
           TY  + SLL FIAGPKL +KW+CWSSVSK VQ K+VACISEET IS +ERLDLALSS TN
Sbjct: 181 TYQSIVSLLFFIAGPKLPAKWNCWSSVSKLVQSKKVACISEETSISIVERLDLALSSITN 240

Query: 241 HQSNKELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILN 287
           HQS+K+ QI   DMQNLLR+CGASIK+VEEEL+ LYRFIIK RVSLLNI N
Sbjct: 241 HQSDKDFQIHVGDMQNLLRDCGASIKKVEEELEGLYRFIIKIRVSLLNIFN 290

[Close]

BLAST of MELO3C013270.2.1 vs. NCBI nr
Match: XP_008447871.1 (PREDICTED: uncharacterized protein LOC103490224 [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 4.5e-100
Identity = 210/291 (72.16%), Postives = 236/291 (81.10%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSE--TTSSSSLCHRLGALQD 60
           MDASTLN RNSQHVRSKS PSNPHPIISQV+EQL RLR DSE  ++SSSSLCH+L ALQD
Sbjct: 1   MDASTLNRRNSQHVRSKSVPSNPHPIISQVDEQLSRLR-DSEAISSSSSSLCHKLSALQD 60

Query: 61  LYDGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELES 120
           L+D VDKLL+L  SQQAL   S+KE LD+L+EGSL LLDLCDTAK  L+QTREC HE ES
Sbjct: 61  LHDSVDKLLILPLSQQALVPVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFES 120

Query: 121 ILRRKRGEICTSSSLQK---SRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAI 180
           +LRR+R EI TSSSL+K   SRKM+KK I K LKGME +  +K   S T VN IKEVEA+
Sbjct: 121 VLRRRRSEIGTSSSLKKCLSSRKMVKKAIHKVLKGMESKQSNKDSESFTFVNQIKEVEAV 180

Query: 181 TYHCMESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTN 240
           T   + SLL FIAGPKL +KW CWSSVSK VQ K+VACISEET IS +ERLDLALSS +N
Sbjct: 181 TSQSIVSLLFFIAGPKLPAKWICWSSVSKLVQSKKVACISEETSISIVERLDLALSSVSN 240

Query: 241 HQSNKELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILN 287
           HQS+K+ QI   DMQNLLR+CGASIKEVEEEL+ LYR IIKTRVSLLNI N
Sbjct: 241 HQSDKDCQIHVGDMQNLLRDCGASIKEVEEELEGLYRLIIKTRVSLLNIFN 290

[Close]

BLAST of MELO3C013270.2.1 vs. TAIR10
Match: AT2G17070.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-41
Identity = 115/281 (40.93%), Postives = 174/281 (61.92%), Query Frame = 0


Query: 11  SQHVRSKSEPSNPHPIISQVNEQLRRLRPDSE--TTSSSSLCHRLGALQDLYDGVDKLLV 70
           S HVRS S PS PHP  + V+EQL RLR   E  T+SSSS+C RL  LQ+L++ +DKL+ 
Sbjct: 4   SFHVRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQELHESLDKLIR 63

Query: 71  LLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEIC 130
           L  +QQAL Q+ NK+ ++ L++GSL +LD+C+ +K+ L Q +E + E++SILRRKRG++ 
Sbjct: 64  LPVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSILRRKRGDL- 123

Query: 131 TSSSLQK---SRKMIKKT---IQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCMES 190
            S  ++K   SRK  KKT   +QKSLK  + E       SL +     E EA+T    +S
Sbjct: 124 -SGEVKKYLASRKSFKKTFQKVQKSLKAAQAE--DNKDKSLAVFG---EAEAVTIAMFDS 183

Query: 191 LLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNKEL 250
           L S+++G K  SKWS    VSK +  K++ C ++E + ++++         +  QS K L
Sbjct: 184 LFSYMSGSKTCSKWSV---VSKLMNKKKITCEAQENEFTKVD---------SEFQSEKTL 243

Query: 251 QIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLN 284
           +++D     +L  C   I++ E+ L+SL + +IK RVS+LN
Sbjct: 244 KMED---VQILESC---IQDFEDGLESLSKSLIKYRVSILN 259

[Close]

BLAST of MELO3C013270.2.1 vs. TAIR10
Match: AT2G17080.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 158.3 bits (399), Expect = 7.1e-39
Identity = 110/285 (38.60%), Postives = 175/285 (61.40%), Query Frame = 0


Query: 11  SQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETT--SSSSLCHRLGALQDLYDGVDKLLV 70
           S HVRS S PS  HP  + V+EQL RLR   + +      +C RL  LQ+L++ +DKL+ 
Sbjct: 4   SFHVRSNSFPSRSHPQAAHVDEQLARLRSSEQASXXXXXXICQRLDNLQELHESLDKLIS 63

Query: 71  LLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEIC 130
              +QQAL+Q+ NK+ ++ L++GSL +LDLC+ +K+ L + +E + E++SILRRKRG++ 
Sbjct: 64  RPVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSILRRKRGDL- 123

Query: 131 TSSSLQK---SRKMIKKT---IQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCMES 190
            S  ++K   SRK +KK+   +QKSLK  + E       +   + +  E EAIT    +S
Sbjct: 124 -SEEVKKYLTSRKSLKKSFQKVQKSLKVTQAE-----DNNDDTLAVFGEAEAITLSLFDS 183

Query: 191 LLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNKEL 250
           LLS+++G K  SKWS    VSK +  K+V C ++E + ++++         +  QS K L
Sbjct: 184 LLSYMSGSKTCSKWSV---VSKLMNKKKVTCEAQENEFTKVD---------SEFQSEKTL 243

Query: 251 QIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 288
           ++  +D+QNL     + I+++E+ L+SL + +IK RVS LNIL +
Sbjct: 244 KM--DDVQNL----ESCIQDLEDGLESLSKSLIKYRVSFLNILGH 263

[Close]

BLAST of MELO3C013270.2.1 vs. TAIR10
Match: AT4G35200.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-37
Identity = 111/278 (39.93%), Postives = 170/278 (61.15%), Query Frame = 0


Query: 11  SQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLYDGVDKLLVLL 70
           S HVRS S PS  HP  + V+EQL RLR  S++ SSSS+C RL  LQDL+D ++K++ L 
Sbjct: 4   SFHVRSNSYPSRQHPQAAHVDEQLTRLR-SSDSASSSSICQRLSNLQDLHDSLEKMIRLS 63

Query: 71  NSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEICTS 130
            +  AL+Q    + ++ L++GSL +LDLC+ AK+ + Q +E + E++SILRRK G++  S
Sbjct: 64  VTNLALSQ----DQIEKLLDGSLRILDLCNIAKDAISQMKEGLMEIQSILRRKPGDL--S 123

Query: 131 SSLQK---SRKMIKKTIQKSLKGME-GEHFHKVHGSLTIVNLIKEVEAITYHCMESLLSF 190
             ++K   SRK +KK++QK +K ++  +     + SL +       EA+T    ESL SF
Sbjct: 124 GEVKKYLVSRKFLKKSLQKVIKSLKVCQSKDSTNASLVVFG---RAEAVTMALFESLFSF 183

Query: 191 IAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNKELQIQD 250
           ++G K   KWS    VSK +   +V C   E + +E  R+D      +  QS K LQ+  
Sbjct: 184 MSGSKACGKWSL---VSKMMSQNKVTC---EAEANEFTRID------SEFQSEKSLQM-- 243

Query: 251 EDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNI 285
           ED+QNL     + I+++E+ ++SL + +IK RVS+LNI
Sbjct: 244 EDVQNL----ESCIQDLEDGIESLSKSLIKYRVSILNI 253

[Close]

BLAST of MELO3C013270.2.1 vs. TAIR10
Match: AT4G35210.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-37
Identity = 111/277 (40.07%), Postives = 167/277 (60.29%), Query Frame = 0


Query: 11  SQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLYDGVDKLLVLL 70
           S HVRS S PS  HP  + V+EQL RLR  S T SSSS+C RL  LQDL+D ++K++ L 
Sbjct: 4   SFHVRSSSYPSRQHPQAAHVDEQLTRLR-SSGTASSSSICQRLSNLQDLHDSLEKMIRLS 63

Query: 71  NSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEICTS 130
            + QAL+Q    + ++ L++GS+ +LDLC  +K+GL Q +E + E++SI+RRKRG++  S
Sbjct: 64  VTNQALSQ----DQIEKLLDGSIKILDLCSISKDGLSQMKESLKEIQSIVRRKRGDL--S 123

Query: 131 SSLQK---SRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCMESLLSFI 190
           + ++K   SRK +KK+ +K LK ++       + +L +     E E +T    ESL SF+
Sbjct: 124 AEVKKYLASRKFLKKSFEKVLKSLKTS--QNKNDALAVFG---EAETVTIALFESLFSFM 183

Query: 191 AGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNKELQIQDE 250
           +G K   KWS    VSK +   +  C   E + +E  R+D+        QS K LQ+  E
Sbjct: 184 SGSKACGKWSL---VSKMMSQSKGTC---EAEANEFTRVDM------EFQSEKSLQM--E 243

Query: 251 DMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNI 285
           D+QNL       I+++E+ + SL + +IK RVS+LNI
Sbjct: 244 DVQNL----EICIQDLEDGIGSLSKSLIKYRVSILNI 250

[Close]

BLAST of MELO3C013270.2.1 vs. TAIR10
Match: AT4G35690.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-19
Identity = 78/292 (26.71%), Postives = 153/292 (52.40%), Query Frame = 0


Query: 14  VRSKSEPSNPHPIISQVNEQLRRLRP-DSETTSSSSLCHRLGALQDLYDGVDKLLVLLNS 73
           +RS S PS+ HP  + + E L +++  ++ T SS S+   L  L++LY+  +  L + ++
Sbjct: 10  LRSISLPSSSHPSTTGIEESLNKVKTINTMTGSSESVLMGLEGLEELYNCTEDFLKMGST 69

Query: 74  QQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKR---GE--- 133
           Q+ ++     E ++++++GSL L+D+C  +++ +++T+E +  ++S +RRK+   GE   
Sbjct: 70  QRVMSSSDGSEFMEEMLDGSLRLMDICSVSRDLMVETQEHVRGVQSCVRRKKVVGGEDQL 129

Query: 134 ---ICTSSSLQKSRKMIKKTIQKSLKGMEG--------EHFHKVHGSLTIVNLIKEVEAI 193
              +      +K+ +   K +  SLK ++G                    V+ +++V ++
Sbjct: 130 DVAVAGYVGFRKNMRKEAKRLLGSLKNIDGGLSXXXXXXXXXXXXXXXXXVDAMRQVVSV 189

Query: 194 TYHCMESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTN 253
           +   + S L F++G + ++  S  +SV K    K+     EET  +E+E LDL       
Sbjct: 190 SVAVLRSFLEFLSGRRQSNIKSKLASVLK----KKKVHHVEETK-NELENLDL------- 249

Query: 254 HQSNKELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 288
                E+     D+Q  L E   SI   E++L+ L+R +I+TR SLLNI+++
Sbjct: 250 -----EIFCSRNDLQKKLEEVEMSIDGFEKKLEGLFRRLIRTRASLLNIISH 284

[Close]

BLAST of MELO3C013270.2.1 vs. TrEMBL
Match: tr|A0A1S3BIF9|A0A1S3BIF9_CUCME (uncharacterized protein LOC103490228 OS=Cucumis melo OX=3656 GN=LOC103490228 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 1.8e-153
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLY 60
           MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLY
Sbjct: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLY 60

Query: 61  DGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESIL 120
           DGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESIL
Sbjct: 61  DGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESIL 120

Query: 121 RRKRGEICTSSSLQKSRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCM 180
           RRKRGEICTSSSLQKSRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCM
Sbjct: 121 RRKRGEICTSSSLQKSRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCM 180

Query: 181 ESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNK 240
           ESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNK
Sbjct: 181 ESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNK 240

Query: 241 ELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 288
           ELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN
Sbjct: 241 ELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 287

[Close]

BLAST of MELO3C013270.2.1 vs. TrEMBL
Match: tr|A0A0A0K659|A0A0A0K659_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023950 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 4.3e-139
Identity = 265/287 (92.33%), Postives = 270/287 (94.08%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLY 60
           MDASTLNPRNSQHVRSKSE SNPHPIISQVNEQLRRLRPDSE T SSSLCHRLGALQDLY
Sbjct: 1   MDASTLNPRNSQHVRSKSENSNPHPIISQVNEQLRRLRPDSEAT-SSSLCHRLGALQDLY 60

Query: 61  DGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESIL 120
           DGVDKLLVL NSQ AL QQSN+EV DDL+EGSLMLLDLCDTAKNGLLQTRECIHELESIL
Sbjct: 61  DGVDKLLVLPNSQNALVQQSNEEVFDDLLEGSLMLLDLCDTAKNGLLQTRECIHELESIL 120

Query: 121 RRKRGEICTSSSLQKSRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCM 180
           RRKRGEICTSSSL KSRKMIKKTIQK+LKGMEGE FHKVHGSLTIVNLIKEVEAITYH +
Sbjct: 121 RRKRGEICTSSSLHKSRKMIKKTIQKALKGMEGEPFHKVHGSLTIVNLIKEVEAITYHSL 180

Query: 181 ESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNK 240
           ESLLSFIAGPKL SKWSCWSSVS  VQPKRVACISEETDIS +ERLDLALSSFTNHQSNK
Sbjct: 181 ESLLSFIAGPKLPSKWSCWSSVSMLVQPKRVACISEETDISVVERLDLALSSFTNHQSNK 240

Query: 241 ELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 288
           E QIQDEDMQNLLRECGASIKEVEEELD LYRFIIKTRVSLLNI NN
Sbjct: 241 EFQIQDEDMQNLLRECGASIKEVEEELDGLYRFIIKTRVSLLNIFNN 286

[Close]

BLAST of MELO3C013270.2.1 vs. TrEMBL
Match: tr|A0A0A0K1I3|A0A0A0K1I3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023970 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 4.2e-102
Identity = 211/291 (72.51%), Postives = 239/291 (82.13%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSE--TTSSSSLCHRLGALQD 60
           MDASTLN RNSQHVRSKS PSNPHPIISQV+EQL RLR DSE  ++SSSSLCH+L ALQD
Sbjct: 1   MDASTLNQRNSQHVRSKSVPSNPHPIISQVDEQLSRLR-DSEAISSSSSSLCHKLSALQD 60

Query: 61  LYDGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELES 120
           L+D VDKLL+L  SQQAL Q S+KE LD+L+EGSL LLDLCDTAK  L+QTREC HE ES
Sbjct: 61  LHDSVDKLLILPLSQQALVQVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFES 120

Query: 121 ILRRKRGEICTSSSLQK---SRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAI 180
           +LRR+R +I TSSSL+K   SRK+IKK I K LKGME +  +K   S T VN IKEVEA+
Sbjct: 121 VLRRRRSDIGTSSSLKKCLSSRKLIKKAIHKVLKGMESKQTNKDSESFTFVNQIKEVEAV 180

Query: 181 TYHCMESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTN 240
           TY  + SLL FIAGPKL +KW+CWSSVSK VQ K+VACISEET IS +ERLDLALSS TN
Sbjct: 181 TYQSIVSLLFFIAGPKLPAKWNCWSSVSKLVQSKKVACISEETSISIVERLDLALSSITN 240

Query: 241 HQSNKELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILN 287
           HQS+K+ QI   DMQNLLR+CGASIK+VEEEL+ LYRFIIK RVSLLNI N
Sbjct: 241 HQSDKDFQIHVGDMQNLLRDCGASIKKVEEELEGLYRFIIKIRVSLLNIFN 290

[Close]

BLAST of MELO3C013270.2.1 vs. TrEMBL
Match: tr|A0A1S3BJ22|A0A1S3BJ22_CUCME (uncharacterized protein LOC103490224 OS=Cucumis melo OX=3656 GN=LOC103490224 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.0e-100
Identity = 210/291 (72.16%), Postives = 236/291 (81.10%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSE--TTSSSSLCHRLGALQD 60
           MDASTLN RNSQHVRSKS PSNPHPIISQV+EQL RLR DSE  ++SSSSLCH+L ALQD
Sbjct: 1   MDASTLNRRNSQHVRSKSVPSNPHPIISQVDEQLSRLR-DSEAISSSSSSLCHKLSALQD 60

Query: 61  LYDGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELES 120
           L+D VDKLL+L  SQQAL   S+KE LD+L+EGSL LLDLCDTAK  L+QTREC HE ES
Sbjct: 61  LHDSVDKLLILPLSQQALVPVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFES 120

Query: 121 ILRRKRGEICTSSSLQK---SRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAI 180
           +LRR+R EI TSSSL+K   SRKM+KK I K LKGME +  +K   S T VN IKEVEA+
Sbjct: 121 VLRRRRSEIGTSSSLKKCLSSRKMVKKAIHKVLKGMESKQSNKDSESFTFVNQIKEVEAV 180

Query: 181 TYHCMESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTN 240
           T   + SLL FIAGPKL +KW CWSSVSK VQ K+VACISEET IS +ERLDLALSS +N
Sbjct: 181 TSQSIVSLLFFIAGPKLPAKWICWSSVSKLVQSKKVACISEETSISIVERLDLALSSVSN 240

Query: 241 HQSNKELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILN 287
           HQS+K+ QI   DMQNLLR+CGASIKEVEEEL+ LYR IIKTRVSLLNI N
Sbjct: 241 HQSDKDCQIHVGDMQNLLRDCGASIKEVEEELEGLYRLIIKTRVSLLNIFN 290

[Close]

BLAST of MELO3C013270.2.1 vs. TrEMBL
Match: tr|A0A0A0K2T0|A0A0A0K2T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023980 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 153/292 (52.40%), Postives = 218/292 (74.66%), Query Frame = 0


Query: 1   MDASTLNPRNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSS-LCHRLGALQDL 60
           MDAS LNP+NS HVRS S PS PHP I QV+EQL RL+  S+ TSSSS LCH+L  LQDL
Sbjct: 1   MDASALNPKNSHHVRSNSLPSKPHPFIDQVDEQLCRLKEVSKATSSSSELCHKLNDLQDL 60

Query: 61  YDGVDKLLVLLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESI 120
           +D +D++L+L ++Q  L ++S+K+  +DL+EGS+ LLDLCD AK+ LLQ++EC+HELES+
Sbjct: 61  HDSIDRMLLLSHTQHILVEESDKKSFNDLLEGSIKLLDLCDIAKDALLQSKECVHELESV 120

Query: 121 LRRKR-GEICTSSSLQK---SRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAI 180
           LRR+R GE+  +S +QK   SRK+IKKTI K+LK +E +   K   S  IV+ +K+ E +
Sbjct: 121 LRRRRGGEMFIASEVQKGLSSRKLIKKTINKALKAIETKSCEKSQASSAIVSSLKQAEVV 180

Query: 181 TYHCMESLLSFIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTN 240
            Y+ ++SLLS++AGPK +S  S WS VSK VQ KRVAC  EET+ +E+  +D AL S  +
Sbjct: 181 GYNVVKSLLSYLAGPKFSSNSSHWSLVSKLVQSKRVACEVEETNRNEVALVDAALHSIAS 240

Query: 241 HQSNK-ELQIQDEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILN 287
            ++ K + ++Q +++QN L+  G++I+++E +L++LYR +IKTRVSLLNI N
Sbjct: 241 QKTKKSDFRVQVDNLQNALKIFGSNIEDLEGDLEALYRHLIKTRVSLLNIYN 292

The following BLAST results are available for this feature:

BLAST of MELO3C013270.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447874.1	2.7e-153	100.00	PREDICTED: uncharacterized protein LOC103490228 [Cucumis melo]	[more]
KGN43321.1	6.5e-139	92.33	hypothetical protein Csa_7G023950 [Cucumis sativus]	[more]
XP_022136177.1	1.3e-107	75.43	uncharacterized protein LOC111007932 [Momordica charantia]	[more]
XP_004144945.1	6.3e-102	72.51	PREDICTED: uncharacterized protein LOC101212326 [Cucumis sativus] >KGN43323.1 hy...	[more]
XP_008447871.1	4.5e-100	72.16	PREDICTED: uncharacterized protein LOC103490224 [Cucumis melo]	[more]

BLAST of MELO3C013270.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17070.1	1.5e-41	40.93	Arabidopsis protein of unknown function (DUF241)	[more]
AT2G17080.1	7.1e-39	38.60	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35200.1	1.0e-37	39.93	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35210.1	1.0e-37	40.07	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35690.1	3.6e-19	26.71	Arabidopsis protein of unknown function (DUF241)	[more]

BLAST of MELO3C013270.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C013270.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BIF9\|A0A1S3BIF9_CUCME	1.8e-153	100.00	uncharacterized protein LOC103490228 OS=Cucumis melo OX=3656 GN=LOC103490228 PE=...	[more]
tr\|A0A0A0K659\|A0A0A0K659_CUCSA	4.3e-139	92.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023950 PE=4 SV=1	[more]
tr\|A0A0A0K1I3\|A0A0A0K1I3_CUCSA	4.2e-102	72.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023970 PE=4 SV=1	[more]
tr\|A0A1S3BJ22\|A0A1S3BJ22_CUCME	3.0e-100	72.16	uncharacterized protein LOC103490224 OS=Cucumis melo OX=3656 GN=LOC103490224 PE=...	[more]
tr\|A0A0A0K2T0\|A0A0A0K2T0_CUCSA	1.7e-71	52.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023980 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004320	DUF241_pln

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003743	translation initiation factor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C013270.2	MELO3C013270.2	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C013270.2.1.exon.1	MELO3C013270.2.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C013270.2.1.five_prime_UTR.1	MELO3C013270.2.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C013270.2.1.CDS.1	MELO3C013270.2.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C013270.2.1	MELO3C013270.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 235..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR31509:SF43	SUBFAMILY NOT NAMED	coord: 1..286
None	No IPR available	PANTHER	PTHR31509	FAMILY NOT NAMED	coord: 1..286
IPR004320	Protein of unknown function DUF241, plant	PFAM	PF03087	DUF241	coord: 53..284 e-value: 8.4E-56 score: 189.3