MELO3C011702T1 (mRNA) Melon (DHL92) v3.5.1

NameMELO3C011702T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSerine/threonine-protein phosphatase
Locationchr3 : 9670341 .. 9670532 (-)
Sequence length192
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGCGGAGGATGGATATGAATTATTTTCCGAGAGACAACTTGTCACAATATTTTCGACCCCTAACAACTGTGGTGAATTTGATAATGTCGGTGCACTGATGAGTGTTGATGAAGAATTGATGTGCTCTCTCCAGATTCTTAAGCCAGTTGACGAAAATGGTAATAAAGTCATGGTGCCAACAAGAACGTAA

mRNA sequence

GTTGCGGAGGATGGATATGAATTATTTTCCGAGAGACAACTTGTCACAATATTTTCGACCCCTAACAACTGTGGTGAATTTGATAATGTCGGTGCACTGATGAGTGTTGATGAAGAATTGATGTGCTCTCTCCAGATTCTTAAGCCAGTTGACGAAAATGGTAATAAAGTCATGGTGCCAACAAGAACGTAA

Coding sequence (CDS)

GTTGCGGAGGATGGATATGAATTATTTTCCGAGAGACAACTTGTCACAATATTTTCGACCCCTAACAACTGTGGTGAATTTGATAATGTCGGTGCACTGATGAGTGTTGATGAAGAATTGATGTGCTCTCTCCAGATTCTTAAGCCAGTTGACGAAAATGGTAATAAAGTCATGGTGCCAACAAGAACGTAA

Protein sequence

VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVPTRT*
BLAST of MELO3C011702T1 vs. Swiss-Prot
Match: PP1A_RABIT (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Oryctolagus cuniculus GN=PPP1CA PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.2e-18
Identity = 41/56 (73.21%), Postives = 44/56 (78.57%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNK 57
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS QILKP D+N  K
Sbjct: 250 VVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGK 305

BLAST of MELO3C011702T1 vs. Swiss-Prot
Match: PP1A_RAT (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus GN=Ppp1ca PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.2e-18
Identity = 41/56 (73.21%), Postives = 44/56 (78.57%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNK 57
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS QILKP D+N  K
Sbjct: 250 VVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGK 305

BLAST of MELO3C011702T1 vs. Swiss-Prot
Match: PP1A_BOVIN (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Bos taurus GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.2e-18
Identity = 41/56 (73.21%), Postives = 44/56 (78.57%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNK 57
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS QILKP D+N  K
Sbjct: 250 VVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGK 305

BLAST of MELO3C011702T1 vs. Swiss-Prot
Match: PP1A_CANLF (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Canis lupus familiaris GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.2e-18
Identity = 41/56 (73.21%), Postives = 44/56 (78.57%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNK 57
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS QILKP D+N  K
Sbjct: 250 VVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGK 305

BLAST of MELO3C011702T1 vs. Swiss-Prot
Match: PP1A_MOUSE (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus GN=Ppp1ca PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.2e-18
Identity = 41/56 (73.21%), Postives = 44/56 (78.57%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNK 57
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS QILKP D+N  K
Sbjct: 250 VVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGK 305

BLAST of MELO3C011702T1 vs. TrEMBL
Match: A0A0A0KQB9_CUCSA (Serine/threonine-protein phosphatase OS=Cucumis sativus GN=Csa_5G184820 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 7.5e-22
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F+ERQLVTIFS PN CGEFDN GALMSVDEELMCS QILKP D+ GNKVMVP
Sbjct: 255 VVEDGYEFFAERQLVTIFSAPNYCGEFDNAGALMSVDEELMCSFQILKPADKKGNKVMVP 314

Query: 61  TRT 64
            RT
Sbjct: 315 ART 317

BLAST of MELO3C011702T1 vs. TrEMBL
Match: A0A078FC63_BRANA (Serine/threonine-protein phosphatase OS=Brassica napus GN=BnaC03g70370D PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.2e-17
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS Q+LKP ++  NK M+ 
Sbjct: 229 VVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQVLKPAEKKSNKFMMS 288

Query: 61  TR 63
           T+
Sbjct: 289 TK 290

BLAST of MELO3C011702T1 vs. TrEMBL
Match: A0A078G1S9_BRANA (Serine/threonine-protein phosphatase OS=Brassica napus GN=BnaC04g05540D PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.2e-17
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS Q+LKP ++  NK M+ 
Sbjct: 252 VVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQVLKPAEKKSNKFMMS 311

Query: 61  TR 63
           T+
Sbjct: 312 TK 313

BLAST of MELO3C011702T1 vs. TrEMBL
Match: A0A0D3BQF6_BRAOL (Serine/threonine-protein phosphatase OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.2e-17
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS Q+LKP ++  NK M+ 
Sbjct: 252 VVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQVLKPAEKKSNKFMMS 311

Query: 61  TR 63
           T+
Sbjct: 312 TK 313

BLAST of MELO3C011702T1 vs. TrEMBL
Match: A0A022R4S4_ERYGU (Serine/threonine-protein phosphatase (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a0105852mg PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.2e-17
Identity = 47/62 (75.81%), Postives = 49/62 (79.03%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F+ERQLVTIFS PN CGEFDN GALMSVDE LMCS QILKP  E  NK M+ 
Sbjct: 187 VVEDGYEFFAERQLVTIFSAPNYCGEFDNAGALMSVDENLMCSFQILKPA-ERKNKFMMA 246

Query: 61  TR 63
           TR
Sbjct: 247 TR 247

BLAST of MELO3C011702T1 vs. TAIR10
Match: AT3G46820.1 (AT3G46820.1 type one serine/threonine protein phosphatase 5)

HSP 1 Score: 89.4 bits (220), Expect = 9.0e-19
Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVD 52
           V EDGYE F++RQLVT+FS PN CGEFDN GALMSVDE LMCS QILKPVD
Sbjct: 256 VVEDGYEFFADRQLVTMFSAPNYCGEFDNAGALMSVDESLMCSFQILKPVD 306

BLAST of MELO3C011702T1 vs. TAIR10
Match: AT5G59160.1 (AT5G59160.1 type one serine/threonine protein phosphatase 2)

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-18
Identity = 40/51 (78.43%), Postives = 41/51 (80.39%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVD 52
           V EDGYE F++RQLVTIFS PN CGEFDN GA+MSVDE LMCS QILKP D
Sbjct: 256 VVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPAD 306

BLAST of MELO3C011702T1 vs. TAIR10
Match: AT2G39840.1 (AT2G39840.1 type one serine/threonine protein phosphatase 4)

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-18
Identity = 42/62 (67.74%), Postives = 46/62 (74.19%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS QILKP  E   K M+ 
Sbjct: 260 VVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPA-EKKTKFMMS 319

Query: 61  TR 63
           T+
Sbjct: 320 TK 320

BLAST of MELO3C011702T1 vs. TAIR10
Match: AT2G29400.1 (AT2G29400.1 type one protein phosphatase 1)

HSP 1 Score: 86.7 bits (213), Expect = 5.8e-18
Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDE 53
           V EDGYE F+ERQLVT+FS PN CGEFDN GA+MS+DE LMCS QILKP ++
Sbjct: 262 VVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSIDESLMCSFQILKPSEK 313

BLAST of MELO3C011702T1 vs. TAIR10
Match: AT1G64040.1 (AT1G64040.1 type one serine/threonine protein phosphatase 3)

HSP 1 Score: 83.6 bits (205), Expect = 4.9e-17
Identity = 38/55 (69.09%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGN 56
           V EDGYE F+ RQLVTIFS PN CGEFDN GA+MSVD+ L CS QILK  ++ GN
Sbjct: 247 VVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKASEKKGN 301

BLAST of MELO3C011702T1 vs. NCBI nr
Match: gi|449465842|ref|XP_004150636.1| (PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-21
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F+ERQLVTIFS PN CGEFDN GALMSVDEELMCS QILKP D+ GNKVMVP
Sbjct: 255 VVEDGYEFFAERQLVTIFSAPNYCGEFDNAGALMSVDEELMCSFQILKPADKKGNKVMVP 314

Query: 61  TRT 64
            RT
Sbjct: 315 ART 317

BLAST of MELO3C011702T1 vs. NCBI nr
Match: gi|659123528|ref|XP_008461712.1| (PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo])

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-21
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F+ERQLVTIFS PN CGEFDN GALMSVDEELMCS QILKP D+ GNKVMVP
Sbjct: 255 VVEDGYEFFAERQLVTIFSAPNYCGEFDNAGALMSVDEELMCSFQILKPADKKGNKVMVP 314

Query: 61  TRT 64
            RT
Sbjct: 315 ART 317

BLAST of MELO3C011702T1 vs. NCBI nr
Match: gi|922459683|ref|XP_013631331.1| (PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4-like [Brassica oleracea var. oleracea])

HSP 1 Score: 94.7 bits (234), Expect = 6.1e-17
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS Q+LKP ++  NK M+ 
Sbjct: 252 VVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQVLKPAEKKSNKFMMS 311

Query: 61  TR 63
           T+
Sbjct: 312 TK 313

BLAST of MELO3C011702T1 vs. NCBI nr
Match: gi|923622840|ref|XP_013748031.1| (PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4-like [Brassica napus])

HSP 1 Score: 94.7 bits (234), Expect = 6.1e-17
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS Q+LKP ++  NK M+ 
Sbjct: 252 VVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQVLKPAEKKSNKFMMS 311

Query: 61  TR 63
           T+
Sbjct: 312 TK 313

BLAST of MELO3C011702T1 vs. NCBI nr
Match: gi|674922708|emb|CDY10577.1| (BnaC03g70370D [Brassica napus])

HSP 1 Score: 94.7 bits (234), Expect = 6.1e-17
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1

Query: 1   VAEDGYELFSERQLVTIFSTPNNCGEFDNVGALMSVDEELMCSLQILKPVDENGNKVMVP 60
           V EDGYE F++RQLVT+FS PN CGEFDN GA+MSVDE LMCS Q+LKP ++  NK M+ 
Sbjct: 229 VVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQVLKPAEKKSNKFMMS 288

Query: 61  TR 63
           T+
Sbjct: 289 TK 290

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP1A_RABIT7.2e-1873.21Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Oryctolagus ... [more]
PP1A_RAT7.2e-1873.21Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norve... [more]
PP1A_BOVIN7.2e-1873.21Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Bos taurus G... [more]
PP1A_CANLF7.2e-1873.21Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Canis lupus ... [more]
PP1A_MOUSE7.2e-1873.21Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus... [more]
Match NameE-valueIdentityDescription
A0A0A0KQB9_CUCSA7.5e-2282.54Serine/threonine-protein phosphatase OS=Cucumis sativus GN=Csa_5G184820 PE=3 SV=... [more]
A0A078FC63_BRANA4.2e-1766.13Serine/threonine-protein phosphatase OS=Brassica napus GN=BnaC03g70370D PE=3 SV=... [more]
A0A078G1S9_BRANA4.2e-1766.13Serine/threonine-protein phosphatase OS=Brassica napus GN=BnaC04g05540D PE=3 SV=... [more]
A0A0D3BQF6_BRAOL4.2e-1766.13Serine/threonine-protein phosphatase OS=Brassica oleracea var. oleracea PE=3 SV=... [more]
A0A022R4S4_ERYGU7.2e-1775.81Serine/threonine-protein phosphatase (Fragment) OS=Erythranthe guttata GN=MIMGU_... [more]
Match NameE-valueIdentityDescription
AT3G46820.19.0e-1980.39 type one serine/threonine protein phosphatase 5[more]
AT5G59160.12.0e-1878.43 type one serine/threonine protein phosphatase 2[more]
AT2G39840.12.0e-1867.74 type one serine/threonine protein phosphatase 4[more]
AT2G29400.15.8e-1873.08 type one protein phosphatase 1[more]
AT1G64040.14.9e-1769.09 type one serine/threonine protein phosphatase 3[more]
Match NameE-valueIdentityDescription
gi|449465842|ref|XP_004150636.1|1.1e-2182.54PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis sativus][more]
gi|659123528|ref|XP_008461712.1|1.1e-2182.54PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo][more]
gi|922459683|ref|XP_013631331.1|6.1e-1766.13PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4-like [Brassica ole... [more]
gi|923622840|ref|XP_013748031.1|6.1e-1766.13PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4-like [Brassica nap... [more]
gi|674922708|emb|CDY10577.1|6.1e-1766.13BnaC03g70370D [Brassica napus][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048754 branching morphogenesis of an epithelial tube
biological_process GO:0005981 regulation of glycogen catabolic process
biological_process GO:0007049 cell cycle
biological_process GO:0019433 triglyceride catabolic process
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0036496 regulation of translational initiation by eIF2 alpha dephosphorylation
biological_process GO:0005979 regulation of glycogen biosynthetic process
biological_process GO:2001241 positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
biological_process GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway
biological_process GO:0030324 lung development
biological_process GO:0043153 entrainment of circadian clock by photoperiod
biological_process GO:0032922 circadian regulation of gene expression
biological_process GO:0051301 cell division
cellular_component GO:0043204 perikaryon
cellular_component GO:0072357 PTW/PP1 phosphatase complex
cellular_component GO:0000164 protein phosphatase type 1 complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
cellular_component GO:0070688 MLL5-L complex
cellular_component GO:0042587 glycogen granule
cellular_component GO:0070062 extracellular exosome
cellular_component GO:0043197 dendritic spine
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0043021 ribonucleoprotein complex binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C011702MELO3C011702gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C011702T1MELO3C011702T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C011702T1.cds1MELO3C011702T1.cds1CDS


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11668SERINE/THREONINE PROTEIN PHOSPHATASEcoord: 1..51
score: 1.8
NoneNo IPR availablePANTHERPTHR11668:SF259SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 2-RELATEDcoord: 1..51
score: 1.8