MELO3C011393T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C011393T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Thioredoxin z
Location	chr3 : 24049119 .. 24052591 (+)
Sequence length	996

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCATTTGGATCGGGCAGTGGCGCTGTCTATATTTCTCCCGGCGCCCAAACAACGAACCATATCCATTGGGGAAGCCACTTCCGTCGACTGCAAAGCTTTGAACCTTTCTCCTTCGTCTTTCCCATCGAAAATGGCCGTTTTACAAATCTCCTCTAATCTCTTTCCCATCTGTAATTTTACCTCCATTCGACCTTCCATTTCAATTCCTTTCTCATCCTCAAAAACCCATCATCAAAGTCCGCTTCTTTCTTCTTCCAGCAGACCCTTCTCACTCTCAACCACTCCAAGAAGGATTTTGTGCGAACCCCCTAAAGGAAAGTACATCCATGACGATTATCTTGTGGTACACTTGCGTTTTCTTCTACCTGTTTTGCTAACTTTCCTTGATTTTCGTACGTGTGTTTGTTTTTGTTTTTTTTTCTTTTCAATTGTTTTTGGTGTGGGGTTTACTTGCAGAAGAAGATGACAGCTGCCGAAGTGCAGGAGTTGGTGAAGAGGGAAAGAAATGTGCCGCTTATAATCGATTTCTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGGTATGTCTAATTACATTGAACTTTTGTATGAATTCACATAATGTAAGTGCTTCAATTTCGTGTATGTATGGATCCATTAGCTTTAGCTTAAGGTTTTGGATTTTGTGGTGGTTAAAAATGATAGCAGTGTGTTTGTAGCTCTTGTGTTCAAACTTGTACAATGTCATTTTCTCTTCAATTGATATTGATTATCATTTCTGAGTCTTGTACCCATTAAACCTATAAGTGAGAGGGACCTACATTTGTATGTGTATGAGAGATCGAAGATACCAACTTATCTGACTTATGCTTTTGGGGTTAGCGTTAGAATCAATGTATGAATGTCATTTGATTGCAATTTCAAAATATTGTGGTTCTAGGAAAAGCCTTATCTAGTATAGTTCACATTTCCCCTTTTAGTTTTGACGGGGATGTGCTTCCATATGATTCTGGTAAAGAAGAAAATGTGCTTGATGTGTGAACACCAAAGAGGGATTGATTAAGACCTTCAAGTTATTTATACATGAAAACTACTGCAGATAGTTTGGCTAGTGGTAGGATTCTTGCGATTTGGGCTATTCATATACATGATTCTGTAATATAGTGGTTGGTCTCTTATGGTGGTCTAGCCTTGGCGTTGGGTAGCTTGGAATAAGAAATAATTAGTTTCAAACTGCAGGAGGAAGCAATCAGTGTGGCTAGTTGATAAATTGGATCTCCTTGCTTCCAATTGGTGTATCTCAAACTGGCCATTGCATCTTTTGTTAGTATATTTACTCCTATCTTCCTGTCTTACAGTCCGTTGAGAGGGAAAATCCCAGTCCATACAATCTGTTGTTCTTCTTTCCAGCTAGTTCTCATAGGTGGAAAGTTAGTTTTGGTTTGGATTAATTGGGTGGTTGATTATTAAGCTTGCTTGTTGCAGAATGAAATCATTATTGTTAGTCTTAGTTTTTCACAAAAACTTGTGGTTTTATCAGATGTGAGTGTTGAGCATTCTTTACGTCTCGTACTTGCATAGAAAGGCTTGCCTTTTTATGTGTGCATGTGTGTACATTTTTTTGATCAAGAAACTGTGAGATGGCAAAGGAGCTGAGAGGCACAGGTGCATCTTGGTTGCATTTACATTTCATGCCTTGTAGCATACTTGGATTTTCTACAAGATTGTAGTTCTTAACTTGCTTCAACAAAGTTGGATTTGATTGGATAATTCTTTTTGCATCCTTTTTATTTATTTATTCATTTATATTTTCTGGATAAAAGTTGTGGTTTGCTCAAGCAAATTCTTTATGGACCCACCAATAGAGAATACCAACCATTGGAAGGGTAAGAAGGGGATTCTTCGAACGAAAGTGGGATGTGGGGAATGGGGTGGTGTTACTGGTACAAGAAATGTTTTCAGCGGGGATCATTATTATCCTGGGAATTGTGAGGTTAGGAAGTGTTTTTTGGGAGGGAATCATCATTGTTCTGGGAATTGTGGGGTTAGGGAGAGAGGTTACTGACACTCTCGAAAATTGGCCGGGTATTTTGGTTTGTTCTTAGCATATTCCTTATGTTATGTAGTTGGTTGGTGATACTTCTGTTACTCAATTATGCTCGTGCTCGTTTCGTCCTGTTTTTAATTGAAACATTTAGTAAGGAGTTGCCTTTCAAGTATTTCATGATGCAAACCGTTGATACCTGAACTAAATGGGCACTGCAACTCTCTTGGTGGTCTGGAAACATTACAATAATCTTTTAGATGTCATATTGATCATATTTTGCTCATTCAGGATTGCATTTACAACTTCTAGTTTTAGTTCAGGTAGTTGATGTTATAGGAATGGCAATGAATAAAAAGCTGCATTATATCCTTGTGCTATGAGTCGTCTGAGAGTTTACTCTACTTTTATATTGATTTTTGTTCATGAAGGCTTTGGGCTTACTATTCAATTTGTGGCGGTCAACCATCTTTTCATCCCCTGCATCAATTGGCATAGTATTCAAGATTTGTATTTCTCATGGATCTGTTAATAATATATGACTTGTAAAAGGATTTTGCTTGCTTATGTCGATGCTCTAGGAATTGTTTAGTTCATGGTATTATCTGATATTAACTATGTTCATAGATTAACATTTGGAGTTGTTGGATGAAGCTGTAGCTGTAACGTGCTGTTACAACTCTTTCATTTTGGAAATCATGGATATATTAGCTAACTTGTAGCTCGTATTGCAGCTCGCTGTAGAGTATGAGAACAATGCAATGATCATCAAGGTTGATACAGATGATGAATATGAATTTTCACGAGATATGCAGGTAAAAGTACATAACTCCTTTCTCCTTAACCTGTTTGCAGAGTTGTCCTATCTTCTCATCTACGCTCTCTACTAACCTCCTCGATTTTCCGCAAAGTTGGTCATGAAAGATATTATCTTTGTTCTTACCCACATCGCTAGAAAGATAAATCTGAGTTAAATGCTTGGTTTCAGGTAAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCGATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGAGATATCATTGATAATGAAATGTGAACCATGAAAAATGGAGCTTCAAGCACACCTCTTATCAACACTGCTGGAAAATGGGGGATCGAAGTCCATACAAGACCATATTAGAGCCTTCGATGGAGTTTACCGGCCTCCTGTAAGTCATGTTTTAACCAACTTGAGACAGGGAGATTCAAACAGTAGAAAATCATGAAAGTAGGGTTAGCAATTCATCTAGTTTTAGCATGCTCCCACCATTTTGTAATGAAAACAAAATTGTCTATTACGTAGGAAGTTTACTCTGTAGTAACAACAGCTCAACCAACAGAGACTTGGTTTAAAAATTTTAGTCAATGAGGTTCAAAATTCT

mRNA sequence

GGCATTTGGATCGGGCAGTGGCGCTGTCTATATTTCTCCCGGCGCCCAAACAACGAACCATATCCATTGGGGAAGCCACTTCCGTCGACTGCAAAGCTTTGAACCTTTCTCCTTCGTCTTTCCCATCGAAAATGGCCGTTTTACAAATCTCCTCTAATCTCTTTCCCATCTGTAATTTTACCTCCATTCGACCTTCCATTTCAATTCCTTTCTCATCCTCAAAAACCCATCATCAAAGTCCGCTTCTTTCTTCTTCCAGCAGACCCTTCTCACTCTCAACCACTCCAAGAAGGATTTTGTGCGAACCCCCTAAAGGAAAGTACATCCATGACGATTATCTTGTGAAGAAGATGACAGCTGCCGAAGTGCAGGAGTTGGTGAAGAGGGAAAGAAATGTGCCGCTTATAATCGATTTCTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGCTCGCTGTAGAGTATGAGAACAATGCAATGATCATCAAGGTTGATACAGATGATGAATATGAATTTTCACGAGATATGCAGGTAAAAGTAAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCGATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGAGATATCATTGATAATGAAATGTGAACCATGAAAAATGGAGCTTCAAGCACACCTCTTATCAACACTGCTGGAAAATGGGGGATCGAAGTCCATACAAGACCATATTAGAGCCTTCGATGGAGTTTACCGGCCTCCTGTAAGTCATGTTTTAACCAACTTGAGACAGGGAGATTCAAACAGTAGAAAATCATGAAAGTAGGGTTAGCAATTCATCTAGTTTTAGCATGCTCCCACCATTTTGTAATGAAAACAAAATTGTCTATTACGTAGGAAGTTTACTCTGTAGTAACAACAGCTCAACCAACAGAGACTTGGTTTAAAAATTTTAGTCAATGAGGTTCAAAATTCT

Coding sequence (CDS)

ATGGCCGTTTTACAAATCTCCTCTAATCTCTTTCCCATCTGTAATTTTACCTCCATTCGACCTTCCATTTCAATTCCTTTCTCATCCTCAAAAACCCATCATCAAAGTCCGCTTCTTTCTTCTTCCAGCAGACCCTTCTCACTCTCAACCACTCCAAGAAGGATTTTGTGCGAACCCCCTAAAGGAAAGTACATCCATGACGATTATCTTGTGAAGAAGATGACAGCTGCCGAAGTGCAGGAGTTGGTGAAGAGGGAAAGAAATGTGCCGCTTATAATCGATTTCTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGCTCGCTGTAGAGTATGAGAACAATGCAATGATCATCAAGGTTGATACAGATGATGAATATGAATTTTCACGAGATATGCAGGTAAAAGTAAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCGATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGAGATATCATTGATAATGAAATGTGA

Protein sequence

MAVLQISSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPPKGKYIHDDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM*

Homology

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BLAST of MELO3C011393T2 vs. Swiss-Prot
Match: CITRX_ARATH (Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana GN=CITRX PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 9.6e-60
Identity = 114/161 (70.81%), Postives = 135/161 (83.85%), Query Frame = 1


Query: 19  IRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPPKGKYIHDDYLVKKMTAAE 78
           IRP ++ PFSSS         ++ + PFS  T PR++LC PP+GK++ +DYLVKK++A E
Sbjct: 35  IRP-VAAPFSSS---------TAGNLPFSPLTRPRKLLCPPPRGKFVREDYLVKKLSAQE 94

Query: 79  VQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYEFSRDM 138
           +QELVK +R VPLI+DFYATWCGPCILMAQELEMLAVEYE+NA+I+KVDTDDEYEF+RDM
Sbjct: 95  LQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDM 154

Query: 139 QVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           Q  VRGLPTLFFISPDP+K+AIRTEGLIP+QMM DIIDNEM
Sbjct: 155 Q--VRGLPTLFFISPDPSKDAIRTEGLIPLQMMHDIIDNEM 183

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BLAST of MELO3C011393T2 vs. Swiss-Prot
Match: CITRX_SOLTU (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum tuberosum GN=CITRX PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.4e-55
Identity = 110/158 (69.62%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 27  FSSSKTHHQSPLLSSSSRPFSL----STTPRRILCEPPK-GKYIHDDYLVKKMTAAEVQE 86
           FSS   HH +  L S + P S      T  R+ +C+P   GKY+ +DYLVKK++A E+QE
Sbjct: 20  FSSKLPHHLNYSLFSHTPPTSTLSLTQTLSRKSICQPRAVGKYVREDYLVKKLSAKEIQE 79

Query: 87  LVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYEFSRDMQVK 146
           L+K ERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNA+I+KVDTDDEYEF+RDMQ  
Sbjct: 80  LIKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNALIVKVDTDDEYEFARDMQ-- 139

Query: 147 VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           VRGLPTL+FISPD +K+AIRTEGLIPIQMMRDII+N++
Sbjct: 140 VRGLPTLYFISPDSSKDAIRTEGLIPIQMMRDIINNDL 175

[Close]

BLAST of MELO3C011393T2 vs. Swiss-Prot
Match: CITX1_NICBE (Thioredoxin-like protein CITRX1, chloroplastic OS=Nicotiana benthamiana GN=CITRX1 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.4e-55
Identity = 110/169 (65.09%), Postives = 133/169 (78.70%), Query Frame = 1


Query: 14  CNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPPK---GKYIHDDYL 73
           C+F+S +P+       S   +  P+L  S    S  T  R+ +C+PP    GKY+ +DYL
Sbjct: 20  CHFSSKQPN---QLKYSLFSYTCPILKRSL--LSTQTLSRKSICKPPAVATGKYVREDYL 79

Query: 74  VKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDD 133
           VKK++A ++QEL+K ERNVPLIIDFYATWCGPCILMAQELEMLAVEYE+NA+I+KVD DD
Sbjct: 80  VKKVSAKDIQELIKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYESNALIVKVDADD 139

Query: 134 EYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           EYEF+RDMQ  VRGLPTL+FISPDPNK+AIRTEGLIPIQMMRDII+N++
Sbjct: 140 EYEFARDMQ--VRGLPTLYFISPDPNKDAIRTEGLIPIQMMRDIINNDL 181

[Close]

BLAST of MELO3C011393T2 vs. Swiss-Prot
Match: CITX2_NICBE (Thioredoxin-like protein CITRX2, chloroplastic OS=Nicotiana benthamiana GN=CITRX2 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.2e-55
Identity = 106/146 (72.60%), Postives = 124/146 (84.93%), Query Frame = 1


Query: 37  PLLSSSSRPFSLSTTPRRILCEPPK---GKYIHDDYLVKKMTAAEVQELVKRERNVPLII 96
           P+L  S    S  T  R+ +C+PP    GKY+ +DYLVKK++A ++QEL+K ERNVPLII
Sbjct: 40  PILKRSL--LSTQTLSRKSICKPPDVATGKYVREDYLVKKVSAKDIQELIKGERNVPLII 99

Query: 97  DFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYEFSRDMQVKVRGLPTLFFISP 156
           DFYATWCGPCILMAQELEMLAVEYE+NA+I+KVDTDDEYEF+RDMQ  VRGLPTL+FISP
Sbjct: 100 DFYATWCGPCILMAQELEMLAVEYESNALIVKVDTDDEYEFARDMQ--VRGLPTLYFISP 159

Query: 157 DPNKEAIRTEGLIPIQMMRDIIDNEM 180
           DPNK+AIRTEGLIPIQMMRDII+N++
Sbjct: 160 DPNKDAIRTEGLIPIQMMRDIINNDL 181

[Close]

BLAST of MELO3C011393T2 vs. Swiss-Prot
Match: CITRX_SOLLC (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum lycopersicum GN=CITRX PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.4e-55
Identity = 110/157 (70.06%), Postives = 127/157 (80.89%), Query Frame = 1


Query: 28  SSSKTHHQS-PLLSSSSRPFSLSTTP---RRILCEPPK-GKYIHDDYLVKKMTAAEVQEL 87
           SS   HH +  L   +    +LS T    R  +C+PP  GKY+ +DYLVKK++A E+QEL
Sbjct: 21  SSKLPHHLNYSLFKHAPSTSTLSLTQVLSRNTICKPPAVGKYVREDYLVKKLSAKEIQEL 80

Query: 88  VKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYEFSRDMQVKV 147
           +K ERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNA+I+KVDTDDEYEF+RDMQ  V
Sbjct: 81  IKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNALIVKVDTDDEYEFARDMQ--V 140

Query: 148 RGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           RGLPTL+FISPD +K+AIRTEGLIPIQMMRDIIDN++
Sbjct: 141 RGLPTLYFISPDSSKDAIRTEGLIPIQMMRDIIDNDL 175

[Close]

BLAST of MELO3C011393T2 vs. TrEMBL
Match: A0A0A0KH97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401380 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.6e-90
Identity = 169/176 (96.02%), Postives = 171/176 (97.16%), Query Frame = 1


Query: 4   LQISSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPPKGK 63
           LQ++SNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLS TPRRILCEPPKGK
Sbjct: 10  LQVTSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSPTPRRILCEPPKGK 69

Query: 64  YIHDDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMI 123
           YIHDDYLVKKMTAAEVQELVK ERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMI
Sbjct: 70  YIHDDYLVKKMTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMI 129

Query: 124 IKVDTDDEYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           IKVDTDDEYEFSRDMQ  VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIID EM
Sbjct: 130 IKVDTDDEYEFSRDMQ--VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDREM 183

[Close]

BLAST of MELO3C011393T2 vs. TrEMBL
Match: B9GLZ3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s06590g PE=4 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-63
Identity = 124/166 (74.70%), Postives = 141/166 (84.94%), Query Frame = 1


Query: 18  SIRPSISIPFSSSKTHHQSPLLSSS----SRPFSLSTTPRRILCEPPKGKYIHDDYLVKK 77
           S  P  S P SS KTH +S L S +     RPFSLST  RR+LC PP+GKYI +DYLVKK
Sbjct: 22  SFLPLFSSPQSSFKTHQESSLFSITRTPKKRPFSLSTQQRRLLCRPPQGKYIREDYLVKK 81

Query: 78  MTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYE 137
           ++A E+QELVK ERNVPL+IDFYATWCGPC+LMAQELEMLAVEYE+N MI+KVDTDDEYE
Sbjct: 82  LSAEEIQELVKGERNVPLVIDFYATWCGPCVLMAQELEMLAVEYESNVMIVKVDTDDEYE 141

Query: 138 FSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           F++DMQ  VRGLPTLFFISPDPNK+AIRTEGLIP+QMMRDII+NEM
Sbjct: 142 FAQDMQ--VRGLPTLFFISPDPNKDAIRTEGLIPLQMMRDIINNEM 185

[Close]

BLAST of MELO3C011393T2 vs. TrEMBL
Match: A0A0B0P7W0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_01634 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 8.4e-63
Identity = 127/181 (70.17%), Postives = 150/181 (82.87%), Query Frame = 1


Query: 1   MAVLQISSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSS--RPFSLSTTPRRILCE 60
           MA+LQI +    I       PS+S    SSKTH Q+ L  S++  RPFSLST PR++LC+
Sbjct: 1   MALLQIHTLPHQI-------PSLSPIVFSSKTHSQNSLFFSTTKVRPFSLSTQPRKLLCK 60

Query: 61  PPKGKYIHDDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYE 120
           PP GKY+ +DYLVKKM++ E++ELV+ ER VP+IIDFYATWCGPCILMAQELEMLAVEYE
Sbjct: 61  PPLGKYVREDYLVKKMSSQEIEELVRGERRVPIIIDFYATWCGPCILMAQELEMLAVEYE 120

Query: 121 NNAMIIKVDTDDEYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNE 180
            NA+I+KVDTDDEY+F++DMQ  VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDI+DNE
Sbjct: 121 KNAIIVKVDTDDEYQFAQDMQ--VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDILDNE 172

[Close]

BLAST of MELO3C011393T2 vs. TrEMBL
Match: A0A059BJ55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03224 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.5e-62
Identity = 128/188 (68.09%), Postives = 150/188 (79.79%), Query Frame = 1


Query: 1   MAVLQISSNLF-----PICNFTSIRPSISIPFSSSKTHHQSPLLSSS----SRPFSLSTT 60
           M +LQI S +      P+ +  S  P +     S++   QS L SSS     R F+LST 
Sbjct: 1   MGLLQIHSPIAVFLSKPVSSSHSKPPRLPPFQDSTRNFGQSSLFSSSPGIKDRVFTLSTA 60

Query: 61  PRRILCEPPKGKYIHDDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELE 120
           PR++LC PP+GK++ +DYLVKK++A EVQELV+ ERNVPLIIDFYATWCGPCILMAQELE
Sbjct: 61  PRKLLCTPPQGKHVREDYLVKKLSAQEVQELVRGERNVPLIIDFYATWCGPCILMAQELE 120

Query: 121 MLAVEYENNAMIIKVDTDDEYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMM 180
           MLAVEYENNAMI+KVDTDDEYEF+RDMQ  VRGLPTL+FISPDPNK+AIRTEGLIPIQMM
Sbjct: 121 MLAVEYENNAMIVKVDTDDEYEFARDMQ--VRGLPTLYFISPDPNKDAIRTEGLIPIQMM 180

[Close]

BLAST of MELO3C011393T2 vs. TrEMBL
Match: A0A061FS82_THECC (Thioredoxin z, P,TRX z isoform 1 OS=Theobroma cacao GN=TCM_045045 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 9.3e-62
Identity = 124/173 (71.68%), Postives = 145/173 (83.82%), Query Frame = 1


Query: 10  LFPICNFTSIRPSIS-IPFSSSKTHHQSPLLSSSS--RPFSLSTTPRRILCEPPKGKYIH 69
           LF     +   PS+  + + SSKTH Q+ L  S++  RPFSLST PR++LC+P  GKY+ 
Sbjct: 3   LFQTHTLSHTIPSLPPLSYFSSKTHLQNSLFFSTTNVRPFSLSTQPRKLLCKPTLGKYVR 62

Query: 70  DDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKV 129
           +DYLVKKM+A EV+ELV+ ER+VP+IIDFYATWCGPCILMAQELEMLAVEYE NA+I+KV
Sbjct: 63  EDYLVKKMSAQEVEELVRGERSVPIIIDFYATWCGPCILMAQELEMLAVEYEKNAIIVKV 122

Query: 130 DTDDEYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           DTDDEYEF+ DMQ  VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDI+DNEM
Sbjct: 123 DTDDEYEFAHDMQ--VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDILDNEM 173

[Close]

BLAST of MELO3C011393T2 vs. TAIR10
Match: AT3G06730.1 (AT3G06730.1 Thioredoxin z)

HSP 1 Score: 231.1 bits (588), Expect = 5.4e-61
Identity = 114/161 (70.81%), Postives = 135/161 (83.85%), Query Frame = 1


Query: 19  IRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPPKGKYIHDDYLVKKMTAAE 78
           IRP ++ PFSSS         ++ + PFS  T PR++LC PP+GK++ +DYLVKK++A E
Sbjct: 35  IRP-VAAPFSSS---------TAGNLPFSPLTRPRKLLCPPPRGKFVREDYLVKKLSAQE 94

Query: 79  VQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYEFSRDM 138
           +QELVK +R VPLI+DFYATWCGPCILMAQELEMLAVEYE+NA+I+KVDTDDEYEF+RDM
Sbjct: 95  LQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDM 154

Query: 139 QVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           Q  VRGLPTLFFISPDP+K+AIRTEGLIP+QMM DIIDNEM
Sbjct: 155 Q--VRGLPTLFFISPDPSKDAIRTEGLIPLQMMHDIIDNEM 183

[Close]

BLAST of MELO3C011393T2 vs. TAIR10
Match: AT1G43560.1 (AT1G43560.1 thioredoxin Y2)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08
Identity = 34/108 (31.48%), Postives = 55/108 (50.93%), Query Frame = 1


Query: 72  KKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDE 131
           KK T     +L++   + P+++DFYATWCGPC LM   L  ++   ++   ++K+DT+  
Sbjct: 61  KKQTFNSFDDLLQNS-DKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKY 120

Query: 132 YEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
              +   Q++   LPT  FI     K   R EG +P   + + I+N +
Sbjct: 121 PSLANKYQIE--ALPT--FILFKDGKLWDRFEGALPANQLVERIENSL 163

[Close]

BLAST of MELO3C011393T2 vs. TAIR10
Match: AT1G50320.1 (AT1G50320.1 thioredoxin X)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-08
Identity = 33/106 (31.13%), Postives = 50/106 (47.17%), Query Frame = 1


Query: 71  VKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDD 130
           +K++  +E    V  E   P++++F ATWCGPC L+   +E L+ EY +   I+K+D D 
Sbjct: 71  IKEIGESEFSSTVL-ESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDA 130

Query: 131 EYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIID 177
             +   +   KV GLP              R EG I    +++ ID
Sbjct: 131 NPKLIAEF--KVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYID 173

[Close]

BLAST of MELO3C011393T2 vs. TAIR10
Match: AT1G76760.1 (AT1G76760.1 thioredoxin Y1)

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07
Identity = 39/143 (27.27%), Postives = 65/143 (45.45%), Query Frame = 1


Query: 37  PLLSSSSRPFSLSTTPRRILCEPPKGKYIHDDYLVKKMTAAEVQELVKRERNVPLIIDFY 96
           P LSS++R      TPRRI                KK T    ++L+    + P+++D+Y
Sbjct: 50  PSLSSTTR-----CTPRRIEA--------------KKQTFDSFEDLLVNS-DKPVLVDYY 109

Query: 97  ATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYEFSRDMQVKVRGLPTLFFISPDPN 156
           ATWCGPC  M   L  ++   ++   ++K+DT+     +   + K+  LPT  FI     
Sbjct: 110 ATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIAN--KYKIEALPT--FILFKDG 168

Query: 157 KEAIRTEGLIPIQMMRDIIDNEM 180
           +   R EG +  + +   I++ +
Sbjct: 170 EPCDRFEGALTAKQLIQRIEDSL 168

[Close]

BLAST of MELO3C011393T2 vs. TAIR10
Match: AT5G60640.1 (AT5G60640.1 PDI-like 1-4)

HSP 1 Score: 49.7 bits (117), Expect = 2.2e-06
Identity = 25/73 (34.25%), Postives = 40/73 (54.79%), Query Frame = 1


Query: 86  ERNVPLIIDFYATWCGPCILMAQELEMLAVEY-ENNAMIIKVDTDDEYEFSRDMQVKVRG 145
           E N  ++++FYA WCG C  +A E    A E  E+  ++ K+D  +E E ++  + +V+G
Sbjct: 118 ENNQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQ--EYRVQG 177

Query: 146 LPTLFFISPDPNK 158
            PTL F     +K
Sbjct: 178 FPTLLFFVDGEHK 188

[Close]

BLAST of MELO3C011393T2 vs. NCBI nr
Match: gi|659089253|ref|XP_008445409.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Cucumis melo])

HSP 1 Score: 352.8 bits (904), Expect = 3.5e-94
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 1


Query: 1   MAVLQISSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPP 60
           MAVLQISSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPP
Sbjct: 1   MAVLQISSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPP 60

Query: 61  KGKYIHDDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENN 120
           KGKYIHDDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENN
Sbjct: 61  KGKYIHDDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENN 120

Query: 121 AMIIKVDTDDEYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           AMIIKVDTDDEYEFSRDMQ  VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM
Sbjct: 121 AMIIKVDTDDEYEFSRDMQ--VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 177

[Close]

BLAST of MELO3C011393T2 vs. NCBI nr
Match: gi|449458067|ref|XP_004146769.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Cucumis sativus])

HSP 1 Score: 339.0 bits (868), Expect = 5.2e-90
Identity = 169/176 (96.02%), Postives = 171/176 (97.16%), Query Frame = 1


Query: 4   LQISSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPPKGK 63
           LQ++SNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLS TPRRILCEPPKGK
Sbjct: 10  LQVTSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSPTPRRILCEPPKGK 69

Query: 64  YIHDDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMI 123
           YIHDDYLVKKMTAAEVQELVK ERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMI
Sbjct: 70  YIHDDYLVKKMTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMI 129

Query: 124 IKVDTDDEYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           IKVDTDDEYEFSRDMQ  VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIID EM
Sbjct: 130 IKVDTDDEYEFSRDMQ--VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDREM 183

[Close]

BLAST of MELO3C011393T2 vs. NCBI nr
Match: gi|1012264807|ref|XP_015947088.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Arachis duranensis])

HSP 1 Score: 250.8 bits (639), Expect = 1.9e-63
Identity = 127/171 (74.27%), Postives = 145/171 (84.80%), Query Frame = 1


Query: 10  LFPICNFTSIRPSISIPFSSSKTHHQSPLLSS-SSRPFSLSTTPRRILCEPPKGKYIHDD 69
           L PI  F+S     S PFS S  ++ +P  S+ ++ PFSLST PR+ LC PPKGKY+ +D
Sbjct: 15  LSPISFFSSN----SKPFSVSLRNNNNPTFSTRTNSPFSLSTMPRKFLCNPPKGKYVRED 74

Query: 70  YLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDT 129
           YLVKK++A E+QELVK ERNVPLIIDFYATWCGPCILMAQELEMLAVEYE NAMI+KVDT
Sbjct: 75  YLVKKLSAMEIQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYEKNAMIVKVDT 134

Query: 130 DDEYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           DDEYEF+RDMQ  VRGLPT+FFISPDPNK+AIRTEGL+PIQMMRDIIDNEM
Sbjct: 135 DDEYEFARDMQ--VRGLPTVFFISPDPNKDAIRTEGLVPIQMMRDIIDNEM 179

[Close]

BLAST of MELO3C011393T2 vs. NCBI nr
Match: gi|566147580|ref|XP_002299198.2| (hypothetical protein POPTR_0001s06590g [Populus trichocarpa])

HSP 1 Score: 250.4 bits (638), Expect = 2.4e-63
Identity = 124/166 (74.70%), Postives = 141/166 (84.94%), Query Frame = 1


Query: 18  SIRPSISIPFSSSKTHHQSPLLSSS----SRPFSLSTTPRRILCEPPKGKYIHDDYLVKK 77
           S  P  S P SS KTH +S L S +     RPFSLST  RR+LC PP+GKYI +DYLVKK
Sbjct: 22  SFLPLFSSPQSSFKTHQESSLFSITRTPKKRPFSLSTQQRRLLCRPPQGKYIREDYLVKK 81

Query: 78  MTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYE 137
           ++A E+QELVK ERNVPL+IDFYATWCGPC+LMAQELEMLAVEYE+N MI+KVDTDDEYE
Sbjct: 82  LSAEEIQELVKGERNVPLVIDFYATWCGPCVLMAQELEMLAVEYESNVMIVKVDTDDEYE 141

Query: 138 FSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           F++DMQ  VRGLPTLFFISPDPNK+AIRTEGLIP+QMMRDII+NEM
Sbjct: 142 FAQDMQ--VRGLPTLFFISPDPNKDAIRTEGLIPLQMMRDIINNEM 185

[Close]

BLAST of MELO3C011393T2 vs. NCBI nr
Match: gi|1021585938|ref|XP_016182294.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Arachis ipaensis])

HSP 1 Score: 248.8 bits (634), Expect = 7.1e-63
Identity = 127/172 (73.84%), Postives = 147/172 (85.47%), Query Frame = 1


Query: 10  LFPICNFTSIRPSISIPFSSS-KTHHQSPLLSS-SSRPFSLSTTPRRILCEPPKGKYIHD 69
           L PI  F+S     S PFS S + ++ +P  S+ ++ PFSLST PR++LC PPKGKY+ +
Sbjct: 15  LSPISFFSSN----SKPFSVSLRNNNNNPTFSTRTNSPFSLSTMPRKLLCNPPKGKYVRE 74

Query: 70  DYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVD 129
           DYLVKK++A E+QELVK ERNVPLIIDFYATWCGPCILMAQELEMLAVEYE NAMI+KVD
Sbjct: 75  DYLVKKLSAEEIQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYEKNAMIVKVD 134

Query: 130 TDDEYEFSRDMQVKVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 180
           TDDEYEF+RDMQ  VRGLPT+FFISPDPNK+AIRTEGL+PIQMMRDIIDNEM
Sbjct: 135 TDDEYEFARDMQ--VRGLPTVFFISPDPNKDAIRTEGLVPIQMMRDIIDNEM 180

The following BLAST results are available for this feature:

BLAST of MELO3C011393T2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CITRX_ARATH	9.6e-60	70.81	Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana GN=CITRX P...	[more]
CITRX_SOLTU	1.4e-55	69.62	Thioredoxin-like protein CITRX, chloroplastic OS=Solanum tuberosum GN=CITRX PE=3...	[more]
CITX1_NICBE	1.4e-55	65.09	Thioredoxin-like protein CITRX1, chloroplastic OS=Nicotiana benthamiana GN=CITRX...	[more]
CITX2_NICBE	4.2e-55	72.60	Thioredoxin-like protein CITRX2, chloroplastic OS=Nicotiana benthamiana GN=CITRX...	[more]
CITRX_SOLLC	5.4e-55	70.06	Thioredoxin-like protein CITRX, chloroplastic OS=Solanum lycopersicum GN=CITRX P...	[more]

BLAST of MELO3C011393T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH97_CUCSA	3.6e-90	96.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401380 PE=4 SV=1	[more]
B9GLZ3_POPTR	1.7e-63	74.70	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s06590g PE=4 SV=2	[more]
A0A0B0P7W0_GOSAR	8.4e-63	70.17	Uncharacterized protein OS=Gossypium arboreum GN=F383_01634 PE=4 SV=1	[more]
A0A059BJ55_EUCGR	5.5e-62	68.09	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03224 PE=4 SV=1	[more]
A0A061FS82_THECC	9.3e-62	71.68	Thioredoxin z, P,TRX z isoform 1 OS=Theobroma cacao GN=TCM_045045 PE=4 SV=1	[more]

BLAST of MELO3C011393T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06730.1	5.4e-61	70.81	Thioredoxin z	[more]
AT1G43560.1	1.1e-08	31.48	thioredoxin Y2	[more]
AT1G50320.1	1.4e-08	31.13	thioredoxin X	[more]
AT1G76760.1	2.0e-07	27.27	thioredoxin Y1	[more]
AT5G60640.1	2.2e-06	34.25	PDI-like 1-4	[more]

BLAST of MELO3C011393T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089253\|ref\|XP_008445409.1\|	3.5e-94	98.88	PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Cucumis melo]	[more]
gi\|449458067\|ref\|XP_004146769.1\|	5.2e-90	96.02	PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Cucumis sativus]	[more]
gi\|1012264807\|ref\|XP_015947088.1\|	1.9e-63	74.27	PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Arachis duranensis]	[more]
gi\|566147580\|ref\|XP_002299198.2\|	2.4e-63	74.70	hypothetical protein POPTR_0001s06590g [Populus trichocarpa]	[more]
gi\|1021585938\|ref\|XP_016182294.1\|	7.1e-63	73.84	PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005746	Thioredoxin
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain

Vocabulary: **Biological Process**
Term	Definition
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0006364	rRNA processing
biological_process	GO:0042793	transcription from plastid promoter
biological_process	GO:0006399	tRNA metabolic process
cellular_component	GO:0009295	nucleoid
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0047134	protein-disulfide reductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C011393	MELO3C011393	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C011393T2	MELO3C011393T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C011393T2.cds1	MELO3C011393T2.cds1	CDS
MELO3C011393T2.cds2	MELO3C011393T2.cds2	CDS
MELO3C011393T2.cds3	MELO3C011393T2.cds3	CDS
MELO3C011393T2.cds4	MELO3C011393T2.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 4..179 score: 1.3
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 71..177 score: 9.5
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 70..177 score: 1.05
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 71..158 score: 2.6
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 37..179 score: 13
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 91..99 score: 5.9E-5coord: 99..108 score: 5.9E-5coord: 141..152 score: 5.
None	No IPR available	PANTHER	PTHR10438:SF276	THIOREDOXIN-LIKE PROTEIN CITRX, CHLOROPLASTIC	coord: 4..179 score: 1.3