MELO3C011337T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C011337T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Hippocampus abundant transcript 1 protein
Location	chr3 : 24567940 .. 24569495 (+)
Sequence length	620

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGTAAACGTGAACTTTGATCATAGTGTTGTTCCCAAGGTTCCAATCCGAAGTAAAAACGTCGGATTTTTTGATCTTTATGAAAACGAATTTGTATTCTCACCTAAACCCCTTGTTCCAGGCCGACAATGTACCGGAGCACCGGCGAGCTTCTGCGTTCGGAATTTTATCTGCCATTATCTCTTCTGCTTCCGTCTGCGGGAATCTCTGTGCTCGTTTTCTCTCCATTTCATCCACGTTTCAGGTAACTCTCTGCTTCCTTTCTCTGAAATTGCAATTCTGCTCAGTTTTCAACGTATCGTCTTACTGAATAGGCAGCGGCTTCCACGGCGGCTATGGCGGCTTTGTATATGAGGGTTTTCCTTACTGATTCTGCCTCTAATTGCAATCTTTCTGCTCCCTTACTATCTGGGGAGAACGTAGAATCTGTTTCATCTAAAAAGGAAAAATATGCTTCGGCCTTGCCTTCACTGACGGATCTTTTTTCCTTTTTGAAGACTAGGTATGAGTTCATTTTGGGCCTCCAAACGCAAACTCTTCAGTTCAATTATGTTATTTGCATCTATATCTGTAAATACCTTGGGAAAAATACACGTTTGTATAGTCTAATTAGCATATTTTAACTACTACCTCATCATTTAATTGGTGAATTTTGCCATCAAGCAAAACAAAGAAGTATAAGGAAACCAATAAATAGATGGAAGTAGTGTTTTAAACTTAATTTTTAAAAACTAAACAGTTATGAGACGGGAATTAATTATAAACTAAGTTTAAATCCTAGAAATCAGTAGTGCGTTTTACCCCAGTTTTATCTTTTCTATCTGTCATCAGTTTTTGCAATTTTCCTTCTTGTCATGCCATTTTTTGGCGCCTTGTAGGTGGTTCATTGAATAAGAGCTGGATCCAATAATGATTTTATTTAGTACTTGAACCAATGATGAATAAGAATGTATCGAAGTTTAAGTCACTGACTATCACTTTTGAGTTATCTCATAGTCGTGGAGTTTGGACCAAATAGTTTAGTGGCTCTAAGATAAGATTTTGAGTTTCTTCTTAAATTCTCAATCCTTTTTCTTTTGTACATTATTTGCAGCTCGACATTTTCACAAGCAGCCGTCGTTGCATTTTTTAGCAATCTTGCTGATGTTGGCCATCATGCTTCAATAATGGTTGTTCTTTTGATCCAGGGATCTAATCTTGGTCAGCTTTAATTTGTCAACTTTTAGTTATAATTTTATTCAACTTATTTGGTTTACTTTTAAATAGAAAGTTTTTGTCCTTGGTGATCACTCTCATCTTACTCAGTTTGTAAATTTTTGTCTGGCTCAATTATATATTTTACATCCATAACAGGCTTTCAAGTGTGGCTATTGAACTTCAGTTGAGTAACTAGCTTGTCTTGGACAATTGATATGCTGACCGATGTTTGATTTCCCAACTGCAGTACTATTTAAAAGCGAAATTTCACTTTGACAAGGATAGAATTGCTGATTTGATGGTGATTTCTGGGGTTGCTTCAAGTATTTCTCAGGCATGTCATGCTATTTTACTTTAG

mRNA sequence

AATGGTAAACGTGAACTTTGATCATAGTGTTGTTCCCAAGGTTCCAATCCGAAGTAAAAACGTCGGATTTTTTGATCTTTATGAAAACGAATTTGTATTCTCACCTAAACCCCTTGTTCCAGGCCGACAATGTACCGGAGCACCGGCGAGCTTCTGCGTTCGGAATTTTATCTGCCATTATCTCTTCTGCTTCCGTCTGCGGGAATCTCTGTGCTCGTTTTCTCTCCATTTCATCCACGTTTCAGGCAGCGGCTTCCACGGCGGCTATGGCGGCTTTGTATATGAGGGTTTTCCTTACTGATTCTGCCTCTAATTGCAATCTTTCTGCTCCCTTACTATCTGGGGAGAACGTAGAATCTGTTTCATCTAAAAAGGAAAAATATGCTTCGGCCTTGCCTTCACTGACGGATCTTTTTTCCTTTTTGAAGACTAGCTCGACATTTTCACAAGCAGCCGTCGTTGCATTTTTTAGCAATCTTGCTGATGTTGGCCATCATGCTTCAATAATGTACTATTTAAAAGCGAAATTTCACTTTGACAAGGATAGAATTGCTGATTTGATGGTGATTTCTGGGGTTGCTTCAAGTATTTCTCAGGCATGTCATGCTATTTTACTTTAG

Coding sequence (CDS)

ATGAAAACGAATTTGTATTCTCACCTAAACCCCTTGTTCCAGGCCGACAATGTACCGGAGCACCGGCGAGCTTCTGCGTTCGGAATTTTATCTGCCATTATCTCTTCTGCTTCCGTCTGCGGGAATCTCTGTGCTCGTTTTCTCTCCATTTCATCCACGTTTCAGGCAGCGGCTTCCACGGCGGCTATGGCGGCTTTGTATATGAGGGTTTTCCTTACTGATTCTGCCTCTAATTGCAATCTTTCTGCTCCCTTACTATCTGGGGAGAACGTAGAATCTGTTTCATCTAAAAAGGAAAAATATGCTTCGGCCTTGCCTTCACTGACGGATCTTTTTTCCTTTTTGAAGACTAGCTCGACATTTTCACAAGCAGCCGTCGTTGCATTTTTTAGCAATCTTGCTGATGTTGGCCATCATGCTTCAATAATGTACTATTTAAAAGCGAAATTTCACTTTGACAAGGATAGAATTGCTGATTTGATGGTGATTTCTGGGGTTGCTTCAAGTATTTCTCAGGCATGTCATGCTATTTTACTTTAG

Protein sequence

MKTNLYSHLNPLFQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFLTDSASNCNLSAPLLSGENVESVSSKKEKYASALPSLTDLFSFLKTSSTFSQAAVVAFFSNLADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQACHAILL*

Homology

[Close]

BLAST of MELO3C011337T2 vs. TrEMBL
Match: A0A0A0LMK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G347130 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 6.7e-60
Identity = 124/133 (93.23%), Postives = 128/133 (96.24%), Query Frame = 1


Query: 14  QADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFLT 73
           +ADNVPEHRRASAFGILSA I+SASVCGNLCARFLSISSTFQAAASTAAMAA+YMRVFLT
Sbjct: 13  KADNVPEHRRASAFGILSATIASASVCGNLCARFLSISSTFQAAASTAAMAAVYMRVFLT 72

Query: 74  DSASNCNLSAPLLSGENVESVSSKKEKYASALPSLTDLFSFLKTSSTFSQAAVVAFFSNL 133
           DSA NCNLSAPLLSGENVESVSSKKEKYA+ALPSLTDLFSFLKTSSTFSQ AVVAFFSNL
Sbjct: 73  DSAPNCNLSAPLLSGENVESVSSKKEKYATALPSLTDLFSFLKTSSTFSQVAVVAFFSNL 132

Query: 134 ADVGHHASIMYYL 147
           ADVGHHASIM  L
Sbjct: 133 ADVGHHASIMLLL 145

[Close]

BLAST of MELO3C011337T2 vs. TrEMBL
Match: M5XB70_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005755mg PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 9.3e-46
Identity = 105/166 (63.25%), Postives = 122/166 (73.49%), Query Frame = 1


Query: 13  FQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL 72
           + ADNV E RRAS FG+LS I SSA VCG L  RFLS SSTFQ A S A ++A+Y+R+FL
Sbjct: 131 YVADNVAEERRASTFGVLSGIGSSAFVCGTLFTRFLSTSSTFQVATSVAVVSAMYLRIFL 190

Query: 73  TDSASNCNLSAPLLSGENVESVSSKKEKYAS------ALPSLTDLFSFLKTSSTFSQAAV 132
            DS  +  LSAPLLS E  +   S +   A        LPSL DL S LKTS+TFSQAA+
Sbjct: 191 PDSNIDKKLSAPLLSDEKPKIADSDESSRAQILQPAKTLPSLHDLISLLKTSATFSQAAI 250

Query: 133 VAFFSNLADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 173
           VAFFSNLADVG HAS+MYYLKA+FHF+KD+ ADLMVISGVA +ISQ
Sbjct: 251 VAFFSNLADVGLHASMMYYLKARFHFNKDQFADLMVISGVAGTISQ 296

[Close]

BLAST of MELO3C011337T2 vs. TrEMBL
Match: A0A0A0LQI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G347100 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-45
Identity = 99/139 (71.22%), Postives = 113/139 (81.29%), Query Frame = 1


Query: 13  FQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL 72
           + ADNVPEH+RASAFGILSA IS+A VCG LC RFLSI STFQ AASTA +AA+YMR+FL
Sbjct: 108 YAADNVPEHQRASAFGILSATISAAFVCGTLCTRFLSIPSTFQVAASTAVVAAVYMRIFL 167

Query: 73  TDSASNCNLSAPLLSGENVESVSS-----KKEKYASALPSLTDLFSFLKTSSTFSQAAVV 132
           TDS +NCNLSAPLLSGEN +SVSS     KKE   + LPS+ DLFS L TSSTFSQAA+V
Sbjct: 168 TDSVANCNLSAPLLSGENADSVSSDPISPKKEHIITTLPSVKDLFSLLMTSSTFSQAAIV 227

Query: 133 AFFSNLADVGHHASIMYYL 147
           AF +NLADVG HAS++  L
Sbjct: 228 AFLTNLADVGLHASVLLLL 246

[Close]

BLAST of MELO3C011337T2 vs. TrEMBL
Match: W9RBU2_9ROSA (Hippocampus abundant transcript 1 protein OS=Morus notabilis GN=L484_014308 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-45
Identity = 102/165 (61.82%), Postives = 123/165 (74.55%), Query Frame = 1


Query: 13  FQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL 72
           + ADNVPE RRASAFGILS I S   VCG L ARFLS +STFQ AAS A ++ +YMRVFL
Sbjct: 130 YVADNVPEARRASAFGILSGISSCGFVCGTLTARFLSTASTFQVAASLAVVSLVYMRVFL 189

Query: 73  TDSASNCNLSAPLLSGENVESV-----SSKKEKYASALPSLTDLFSFLKTSSTFSQAAVV 132
            DS  + NLS P++S E   +      SSKKE    ++PS  D+ + L TS TFS+AAVV
Sbjct: 190 PDSVIDDNLSVPIMSTEKPNAKELVKDSSKKENLFKSMPSADDMVALLNTSPTFSKAAVV 249

Query: 133 AFFSNLADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 173
           AFFSNLADVG H+S+MYYLKA+FHF+KD+ ADLMVISG+A +ISQ
Sbjct: 250 AFFSNLADVGLHSSMMYYLKAEFHFNKDQFADLMVISGIAGTISQ 294

[Close]

BLAST of MELO3C011337T2 vs. TrEMBL
Match: A0A061FCU4_THECC (Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034304 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.7e-44
Identity = 97/170 (57.06%), Postives = 125/170 (73.53%), Query Frame = 1


Query: 9   LNPLFQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYM 68
           L+  + ADNVPE RR S FGILS I S A VCG L  RFLS +STFQ A + A ++A+YM
Sbjct: 202 LSLAYVADNVPEGRRVSTFGILSGIGSCAFVCGTLSTRFLSTASTFQVATAMAMLSAVYM 261

Query: 69  RVFLTDSASNCNLSAPLLSGENVESV------SSKKEKYASALPSLTDLFSFLKTSSTFS 128
           R+FL DS  N NLSAP+LS   ++ +      S KK +    +PS+ D+ + LK+S TFS
Sbjct: 262 RIFLPDSIINDNLSAPILSQGKLDGIVNPDEESDKKMQMFKTMPSIEDMLALLKSSLTFS 321

Query: 129 QAAVVAFFSNLADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 173
           QAA+V+FFSNL+DVG HAS++YYLKA+FHF+KD+ ADLMVI+GVA +ISQ
Sbjct: 322 QAAIVSFFSNLSDVGLHASLLYYLKARFHFNKDQFADLMVITGVAGTISQ 371

[Close]

BLAST of MELO3C011337T2 vs. TAIR10
Match: AT2G16990.1 (AT2G16990.1 Major facilitator superfamily protein)

HSP 1 Score: 105.9 bits (263), Expect = 2.6e-23
Identity = 68/181 (37.57%), Postives = 99/181 (54.70%), Query Frame = 1


Query: 13  FQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL 72
           + A N+    R SAFGIL+ I + A + G L ARFL I+ TFQ +A +  +  +YMRVFL
Sbjct: 131 YVAVNIHGSTRISAFGILAGIKTIAGLFGTLVARFLPIALTFQVSAISFFVGLVYMRVFL 190

Query: 73  T---------------------DSASNCNLSAPLLSGENVESVSSKKEKYASALPSLTDL 132
                                 DS +   L+ P+L+   +++    K KY+S    L D+
Sbjct: 191 KEKLNDDEDDDLHHGTYHQEDHDSINTTMLAEPILNDRPIKTQVFHK-KYSS----LKDM 250

Query: 133 FSFLKTSSTFSQAAVVAFFSNLADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSIS 173
            S +KTS+ F QA VV FFS+ +D G  ++ +Y+LKA+F FDK + ADL+++  +  SIS
Sbjct: 251 ISLMKTSTIFFQALVVTFFSSFSDSGMESAFLYFLKARFGFDKKQFADLLLLITIVGSIS 306

[Close]

BLAST of MELO3C011337T2 vs. TAIR10
Match: AT2G16980.2 (AT2G16980.2 Major facilitator superfamily protein)

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 60/179 (33.52%), Postives = 96/179 (53.63%), Query Frame = 1


Query: 13  FQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL 72
           + A NV   +R S FGIL+ + S + VC +L ARFLSI+STFQ AA +  +  +YMRVFL
Sbjct: 132 YVAKNVHGTKRISMFGILAGVSSISGVCASLSARFLSIASTFQVAAISLFIGLVYMRVFL 191

Query: 73  TD-----------SASNCNLSAPLLSGENVESVS--------SKKEKYASALPSLTDLFS 132
            +            +  C     + +G +++ ++        +K   + S   S  D+ S
Sbjct: 192 KERLQDADDDDEADSGGCRSHQEVHNGGDLKMLTEPILRDAPTKTHVFNSKYSSWKDMVS 251

Query: 133 FLKTSSTFSQAAVVAFFSNLADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 173
            +  S+   QA VV FF+  ++ G  +++MY+LKA+F F+K+  A+L ++  +  SISQ
Sbjct: 252 LINNSTILIQALVVTFFATFSESGRGSALMYFLKARFGFNKNDFAELFLLVTIIGSISQ 310

[Close]

BLAST of MELO3C011337T2 vs. TAIR10
Match: AT5G42210.1 (AT5G42210.1 Major facilitator superfamily protein)

HSP 1 Score: 97.8 bits (242), Expect = 7.1e-21
Identity = 56/140 (40.00%), Postives = 84/140 (60.00%), Query Frame = 1


Query: 39  VCGNLCARFLSISSTFQ-AAASTAAMAALYMRVFLTDSASNCNLSAPLLSGENV-----E 98
           +C  L   F SI   ++  +A+   ++ LYMR+FL DS  + +L AP++  E +     E
Sbjct: 1   MCIRLRQSFCSIFIYWRDISAAMGILSTLYMRLFLPDSIRDNSLGAPIVINEKLSSPLLE 60

Query: 99  SVSSKKEKYASALPSLTDLFSFLKTSSTFSQAAVVAFFSNLADVGHHASIMYYLKAKFHF 158
                + +   A+  + ++ S +++S    Q A+V+FFS+LA+ G HAS MYYLKAKFHF
Sbjct: 61  DCPGHRNRIFRAIRLVHEMASLMRSSVPLFQVAMVSFFSSLAEAGLHASSMYYLKAKFHF 120

Query: 159 DKDRIADLMVISGVASSISQ 173
           +KD+ ADLM+I G + SISQ
Sbjct: 121 NKDQFADLMIIVGASGSISQ 140

[Close]

BLAST of MELO3C011337T2 vs. TAIR10
Match: AT2G16970.1 (AT2G16970.1 Major facilitator superfamily protein)

HSP 1 Score: 88.2 bits (217), Expect = 5.6e-18
Identity = 59/181 (32.60%), Postives = 87/181 (48.07%), Query Frame = 1


Query: 15  ADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFLT- 74
           A NV   +R S FG+L+ + S + VC    AR L I+S FQ AA +     +YMRVFL  
Sbjct: 120 AKNVCGRKRISMFGVLAGVRSISGVCATFSARLLPIASIFQVAAISFFFGLVYMRVFLKE 179

Query: 75  ----DSASNCN------------------LSAPLLSGENVESVSSKKEKYASALPSLTDL 134
               D   +C+                  L+ P+L     +       KY+S    L D+
Sbjct: 180 RLHDDDEDDCDEDDNTSGRNHHDGGDLTMLAEPILRDAPTKIHIVLNTKYSS----LKDM 239

Query: 135 FSFLKTSSTFSQAAVVAFFSNLADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSIS 173
            S +K S+   Q  VV FF+  A  G  ++ +Y+LKA+F F+K+  A+L+++  +  SIS
Sbjct: 240 VSLIKNSTILVQTLVVTFFATFAQSGMQSAFLYFLKARFGFNKNDFAELILLVTIIGSIS 296

[Close]

BLAST of MELO3C011337T2 vs. NCBI nr
Match: gi|659089077|ref|XP_008445315.1| (PREDICTED: hippocampus abundant transcript-like protein 1 [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 5.4e-79
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 1


Query: 13  FQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL 72
           + ADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL
Sbjct: 129 YAADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL 188

Query: 73  TDSASNCNLSAPLLSGENVESVSSKKEKYASALPSLTDLFSFLKTSSTFSQAAVVAFFSN 132
           TDSASNCNLSAPLLSGENVESVSSKKEKYASALPSLTDLFSFLKTSSTFSQAAVVAFFSN
Sbjct: 189 TDSASNCNLSAPLLSGENVESVSSKKEKYASALPSLTDLFSFLKTSSTFSQAAVVAFFSN 248

Query: 133 LADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 173
           LADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ
Sbjct: 249 LADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 288

[Close]

BLAST of MELO3C011337T2 vs. NCBI nr
Match: gi|778670405|ref|XP_011649469.1| (PREDICTED: uncharacterized protein LOC105434628 isoform X2 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 4.3e-76
Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 1


Query: 15  ADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFLTD 74
           ADNVPEHRRASAFGILSA I+SASVCGNLCARFLSISSTFQAAASTAAMAA+YMRVFLTD
Sbjct: 2   ADNVPEHRRASAFGILSATIASASVCGNLCARFLSISSTFQAAASTAAMAAVYMRVFLTD 61

Query: 75  SASNCNLSAPLLSGENVESVSSKKEKYASALPSLTDLFSFLKTSSTFSQAAVVAFFSNLA 134
           SA NCNLSAPLLSGENVESVSSKKEKYA+ALPSLTDLFSFLKTSSTFSQ AVVAFFSNLA
Sbjct: 62  SAPNCNLSAPLLSGENVESVSSKKEKYATALPSLTDLFSFLKTSSTFSQVAVVAFFSNLA 121

Query: 135 DVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 173
           DVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ
Sbjct: 122 DVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 159

[Close]

BLAST of MELO3C011337T2 vs. NCBI nr
Match: gi|700207155|gb|KGN62274.1| (hypothetical protein Csa_2G347130 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 9.6e-60
Identity = 124/133 (93.23%), Postives = 128/133 (96.24%), Query Frame = 1


Query: 14  QADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFLT 73
           +ADNVPEHRRASAFGILSA I+SASVCGNLCARFLSISSTFQAAASTAAMAA+YMRVFLT
Sbjct: 13  KADNVPEHRRASAFGILSATIASASVCGNLCARFLSISSTFQAAASTAAMAAVYMRVFLT 72

Query: 74  DSASNCNLSAPLLSGENVESVSSKKEKYASALPSLTDLFSFLKTSSTFSQAAVVAFFSNL 133
           DSA NCNLSAPLLSGENVESVSSKKEKYA+ALPSLTDLFSFLKTSSTFSQ AVVAFFSNL
Sbjct: 73  DSAPNCNLSAPLLSGENVESVSSKKEKYATALPSLTDLFSFLKTSSTFSQVAVVAFFSNL 132

Query: 134 ADVGHHASIMYYL 147
           ADVGHHASIM  L
Sbjct: 133 ADVGHHASIMLLL 145

[Close]

BLAST of MELO3C011337T2 vs. NCBI nr
Match: gi|659089075|ref|XP_008445314.1| (PREDICTED: hippocampus abundant transcript-like protein 1 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 3.6e-59
Identity = 123/165 (74.55%), Postives = 140/165 (84.85%), Query Frame = 1


Query: 13  FQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL 72
           + ADNVPEHRRASAFG+LSA+ SSA VCG LCARFLSI STFQ AA TAA+AA+YMR+FL
Sbjct: 130 YAADNVPEHRRASAFGLLSAVGSSAFVCGTLCARFLSIPSTFQVAALTAAVAAVYMRIFL 189

Query: 73  TDSASNCNLSAPLLSGENVESVSS-----KKEKYASALPSLTDLFSFLKTSSTFSQAAVV 132
           TDS + CNLSAPLLSGENVESVSS     KKE+  + LPS+ DLF+ LKTS TFS AA+V
Sbjct: 190 TDSVAECNLSAPLLSGENVESVSSDPVSLKKEQIITTLPSVKDLFALLKTSLTFSLAAIV 249

Query: 133 AFFSNLADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 173
           AFF NLADVG +AS++YYLKA+FHFDKDR ADLMVISG AS+ISQ
Sbjct: 250 AFFGNLADVGLYASLLYYLKARFHFDKDRFADLMVISGAASTISQ 294

[Close]

BLAST of MELO3C011337T2 vs. NCBI nr
Match: gi|449450482|ref|XP_004142991.1| (PREDICTED: hippocampus abundant transcript 1 protein-like [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 3.1e-58
Identity = 121/165 (73.33%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 13  FQADNVPEHRRASAFGILSAIISSASVCGNLCARFLSISSTFQAAASTAAMAALYMRVFL 72
           + ADNVPEH+RASAFGILSA IS+A VCG LC RFLSI STFQ AASTA +AA+YMR+FL
Sbjct: 129 YAADNVPEHQRASAFGILSATISAAFVCGTLCTRFLSIPSTFQVAASTAVVAAVYMRIFL 188

Query: 73  TDSASNCNLSAPLLSGENVESVSS-----KKEKYASALPSLTDLFSFLKTSSTFSQAAVV 132
           TDS +NCNLSAPLLSGEN +SVSS     KKE   + LPS+ DLFS L TSSTFSQAA+V
Sbjct: 189 TDSVANCNLSAPLLSGENADSVSSDPISPKKEHIITTLPSVKDLFSLLMTSSTFSQAAIV 248

Query: 133 AFFSNLADVGHHASIMYYLKAKFHFDKDRIADLMVISGVASSISQ 173
           AF +NLADVG HAS++YYLKA+F FDKDR ADLMVI G AS+ISQ
Sbjct: 249 AFLTNLADVGLHASVLYYLKARFQFDKDRFADLMVIFGAASTISQ 293

The following BLAST results are available for this feature:

BLAST of MELO3C011337T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMK9_CUCSA	6.7e-60	93.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G347130 PE=4 SV=1	[more]
M5XB70_PRUPE	9.3e-46	63.25	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005755mg PE=4 SV=1	[more]
A0A0A0LQI3_CUCSA	3.5e-45	71.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G347100 PE=4 SV=1	[more]
W9RBU2_9ROSA	3.5e-45	61.82	Hippocampus abundant transcript 1 protein OS=Morus notabilis GN=L484_014308 PE=4...	[more]
A0A061FCU4_THECC	6.7e-44	57.06	Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034304...	[more]

BLAST of MELO3C011337T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G16990.1	2.6e-23	37.57	Major facilitator superfamily protein	[more]
AT2G16980.2	1.9e-21	33.52	Major facilitator superfamily protein	[more]
AT5G42210.1	7.1e-21	40.00	Major facilitator superfamily protein	[more]
AT2G16970.1	5.6e-18	32.60	Major facilitator superfamily protein	[more]

BLAST of MELO3C011337T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089077\|ref\|XP_008445315.1\|	5.4e-79	98.75	PREDICTED: hippocampus abundant transcript-like protein 1 [Cucumis melo]	[more]
gi\|778670405\|ref\|XP_011649469.1\|	4.3e-76	96.20	PREDICTED: uncharacterized protein LOC105434628 isoform X2 [Cucumis sativus]	[more]
gi\|700207155\|gb\|KGN62274.1\|	9.6e-60	93.23	hypothetical protein Csa_2G347130 [Cucumis sativus]	[more]
gi\|659089075\|ref\|XP_008445314.1\|	3.6e-59	74.55	PREDICTED: hippocampus abundant transcript-like protein 1 [Cucumis melo]	[more]
gi\|449450482\|ref\|XP_004142991.1\|	3.1e-58	73.33	PREDICTED: hippocampus abundant transcript 1 protein-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR020846	MFS_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005215	transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C011337	MELO3C011337	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C011337T2	MELO3C011337T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C011337T2.cds1	MELO3C011337T2.cds1	CDS
MELO3C011337T2.cds2	MELO3C011337T2.cds2	CDS
MELO3C011337T2.cds3	MELO3C011337T2.cds3	CDS
MELO3C011337T2.cds4	MELO3C011337T2.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020846	Major facilitator superfamily domain	unknown	SSF103473	MFS general substrate transporter	coord: 11..174 score: 8.63
None	No IPR available	GENE3D	G3DSA:1.20.1250.20		coord: 13..72 score: 1.
None	No IPR available	PANTHER	PTHR23504	FAMILY NOT NAMED	coord: 15..172 score: 4.9
None	No IPR available	PANTHER	PTHR23504:SF36	MAJOR FACILITATOR PROTEIN	coord: 15..172 score: 4.9