MELO3C011144T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C011144T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_31
Location	chr3 : 26049913 .. 26053923 (+)
Sequence length	1110

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCATCGTCTGCTAAATTGCAGTTAAAAAACGAGAAAAACCATTTTTAATTAGCGAAATATTGATTGATGCTTTTCGTTTTCGGTTTCTTCTACCGTTATTTTTATTTTTATTTTCTATTATTATTGTTATCCTATTCACAAGCAATTCGAAGAATAGAGATTAGATTACCTTCTGTGTAGGAAGAAAGGAAGACGAGAGGAAGAAGAAGAAGATTGATTCTTCTGATAAATCCTCTAAATTAATAAACAGAAAAAGAAAAACCCATTATGGTTTCAGACCCCAAGTCCACTCTTTCGAAGCTCAAACCTGATGGCGGCTCCAGGTTAAAGCTTGAATCATCTGATCATAAGAAGAAGATTGACAGCTCCATCAAGAACTCAATTCCCTCTTCCAAGCACAAATCCGTCTCTCTTGTCACCAAATCTGAGGTACCCATTTGTAAATTTTGAGGTTTATTTTCGATTCAGATTTAGCTGCCGCGAATTGGGGTTTTCTTGTTTTTGTCTGAATTGTTTTGATGTTTTGAAAGCCATCTGAAATTGGTAAAGAGTAACGGATTATTGGGGTCATTATGAGGGTTCTTTCAGTTACTTCTGATGTTCCAAGTTCGTATTTGATTGGGGTTTTATTGAAATTTGGATTCTCCTGATTGGACTGTTGTTGTTCTTGGTGGCTTTGAATTGTTTGTGATTGTGACCGTGAAGTCCTTCCATGCTCTGATTGCTGATTTGTTAATTTGGGTTGAATTGTTTTTCTATTTGGAAGGTAAAATCAAAGACAATTTCGAGTTCTTCAAAGACGACAACAAAGACTACAACAACTACTACTGCTACTGCTAAAGTGAGAGAAAAGAAAATCTTTAATTTGCCTGGTCAGAAATATGATCCACCTGAAGAGGTTTGTGCTTTCCTCCTACTTGGTAGTTTGTGTAGTTTATATGATTGATGAACTCATCATTCTTGCTCTTTTGTATGTTGTGAACAGAGAGAGCCGCTTCGGATCTTCTACGAGTCCTTGTCGAAACAAATACCAGCAAGTGAAATGGCAGAGTTTTGGTGCGGTTTGTTTTCTGATATTCTTTTCAGCATTCACTGTCTATTTAATCCTTTGAGAATGTTTCGAGAAAAAAAATCCTTTGGGAACTTCATTATTAGGAATATGGAACTGAGGTTGCTTTGGACTTCATATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCTTGTTTCGTACATGACCCCTTGACCGATGATAATCTGCGCGAGTTTCCCATAGGTAGACCAATTCCTGATGGTATTAGTGAAGCTGGATGATTTTTATCTTCCACTTAATCTACTACTTACTACTATAGGTTCTAAATTTGAATTATAGGTTACAAAATGCTACCGATGTCATATGCAGGAGACTGCCTTTTAGGGGCAGATAAGTTCTGTGAAGTGGTTCCTTTGTGTTTGGGTCATTCCAATTTTCATGTGACAGCTCAATATTTTGGTTACTCATACAAGATGAACCATTAGGTTCAGACTCAAACTTTTCATGTCTTATTCGAGCATTAATGCTAGGAATGATAGATTGAACAAGTGGCTAGTTTTTTATGTGAGAACAAATCCAACTCATGCAGATGTCTTCTACTAGGAACTATTGTTTCTTTGCTTAAGTGTCAGAATTGAATATAATAGCTTGCATCTGATTCTAATTTCTTTTACTGTCTGAATTTGTTCATTTTGTAACTTAAGTTTATGGATATCTTATAAAGTGTGCACATGAATTGTTTACGTATACAACTGAGTTGTAGAGAGCGTATTGAACTAATAGCACGGGTTTGTTTTTGAAGTTAAAGTTGTATATTTTTTGTTGCAATCATGTTGTCATATAAGCTCCTCAAGGGGTGGTCTTGGCAGTGAGGGGTTAAGGATGTTTGAGGAAGTTTCTCTACGAAGCTCTTGGATTCAAGCCCTCCAAGTGAAGAACTTATTTAATGAAAACCTTTGAGCACTCTATGAGCTAGCATTTGGGCGGGTGAAGTCCCTCCATGGAGTAATCGGGAAGGAACGAATTCCACAGGTATCACAATAATTAATGAATATATTGGGGATTGGCTGTAATGAACTCAAGGAACCATGATTAAGTGGAAGAGTATCTTTTTTCCACCAGCAGGAAGATTGCAGTTCGAAGGCAAATTATCTTGTTTTAGGACCGTTATGTTACATATCATGGAGTGAGTCATTTGTTTAATGAAAATTCTTTCACTGGCAGAGGGTCTGGTGTGATTTGTTAGCTTTTCGGAACGATGCACCAAAAATTGGAGTCTCCTGATGGATTACTGGTTGATATTAAGGAATAAGGAGCTTTAACATTAAAATCGAGGTTGTACTAAGGAGGGTTAAGAACAAGATTTTTCTTTTTGAATTTGAAATCACAGCTACCCACTCACTTGAAGAAGATTTCCGAATTTATAATATATAAGACAGGACATAAGACCTTCGGTAGCAAGAGGTAATTAGTTCTATAATAGTTAACATCAGAGCAAAGTTCTGTTGATTCATGAAATATAAACATGAAGGTCTGCATTAGTGGAATTCAATCAATGGCTTTACGTCTCTAAGACAGAATTAGGGCGGTCAAAATTCTAGTAAAATAAAATAAAAGGCAGTAACAATCGTTTTCCATTTCTATGGAGAAAACTACAATCATCAAGTTCTTTTGTAATATTCACAGGGCACCAAATAGATATTCAACCACTTCAAGTTGAAGCAAGTTTCCCGAATTCCAGAAGAATCTTGTAGGTTGATATAGCAAGACTTAACTAGATAGAGATCAAACATGGAGTTTTCTTGTGCCTGCTGTTATAATCTCCCAAAAAGTTAAAGCGATCACAATGTACACTAAATGTTAAAGGCTCGGCTGCAGATGGAGCATGGATGAAGCAGGAATACGGTTTAAGTTTTTGAGCACTTCTAGCCAATTCCTTTCTCTTTCTCTCTCTTGTCCCTGTCATTTCAAGAATTCGATATGCATATAAATTTTTGTTTTATAGTAAAAGTTGCTTAATTAGATACTCGATCAGAATTGTTTTATAAGTTTAATATAATGTTGGTAAATCATTGTAGGATACTTAAAGGATCAAGTCTTCAGATCTGTTAATATGAACTGCTGATGCACTTTTCCATAGATCGTGCCTTCCGGTGGTACTCAAACGTCCCCTGATGAAAAATATCCAATATTTCTTGTATTGTGAAAACTACCTTGACCTGAGGTCCTGATTGTGCTTTTGAAAGCATGCCATCATGTTTATTGATATATTCATTGTTAACATGAGATTGCTAGCCCCTTGTTATCTCAGCTCAAATATTCAAATCATCCCGTTGTCTTTTTCGCTCGATTTGTTCTGTTAAAATGAGATTGCTGGCCCCCCGTATTGTCTTAGGTTGAGGAATGCATCTCTTTTTTGACAATTTTTTTTATGGTTTGTGTAAAACCTTGCATTACTCTTTATTGAGAAGCCAGAAGGGATAACCTGTCTAAATTTCTAGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAAGGCATATGAGAAGAAACTGAGAAGACAAAAGGAACAGAGAACGGGGACTCCGATTAAATCAGCATCAGCAAAACCCCTGAGCAGACCAGAGAGTTCCCAGAGGCCACAACCGCCATCCAAGAATGGTGATATAAAAGCAAAGAAAAAGATCATGAACGATAGTGACGATGACGACGACTTCATTTTAAGCCCCAAAAGAAGAAAAATGTAGGAAAAAGCACGCCGACGACCTTTTTCTTTTCTTTTCTTTTCTTTATTAGCATACTTTACAGTGAATTACTTGATTAAATTTCTTTAGAGTTTAACTGAAAACTACAGAGATGATCATAACCCAACAGTATTTACCAGGACATTCTTTTATGCTCAACAACCTGTGTATGAACAATAATTTAAGGAGAGACAAGTTTATGGTTCAAATCCTTTTCATATAATGC

mRNA sequence

GCTCATCGTCTGCTAAATTGCAGTTAAAAAACGAGAAAAACCATTTTTAATTAGCGAAATATTGATTGATGCTTTTCGTTTTCGGTTTCTTCTACCGTTATTTTTATTTTTATTTTCTATTATTATTGTTATCCTATTCACAAGCAATTCGAAGAATAGAGATTAGATTACCTTCTGTGTAGGAAGAAAGGAAGACGAGAGGAAGAAGAAGAAGATTGATTCTTCTGATAAATCCTCTAAATTAATAAACAGAAAAAGAAAAACCCATTATGGTTTCAGACCCCAAGTCCACTCTTTCGAAGCTCAAACCTGATGGCGGCTCCAGGTTAAAGCTTGAATCATCTGATCATAAGAAGAAGATTGACAGCTCCATCAAGAACTCAATTCCCTCTTCCAAGCACAAATCCGTCTCTCTTGTCACCAAATCTGAGGTAAAATCAAAGACAATTTCGAGTTCTTCAAAGACGACAACAAAGACTACAACAACTACTACTGCTACTGCTAAAGTGAGAGAAAAGAAAATCTTTAATTTGCCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATCTTCTACGAGTCCTTGTCGAAACAAATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAAGGCATATGAGAAGAAACTGAGAAGACAAAAGGAACAGAGAACGGGGACTCCGATTAAATCAGCATCAGCAAAACCCCTGAGCAGACCAGAGAGTTCCCAGAGGCCACAACCGCCATCCAAGAATGGTGATATAAAAGCAAAGAAAAAGATCATGAACGATAGTGACGATGACGACGACTTCATTTTAAGCCCCAAAAGAAGAAAAATGTAGGAAAAAGCACGCCGACGACCTTTTTCTTTTCTTTTCTTTTCTTTATTAGCATACTTTACAGTGAATTACTTGATTAAATTTCTTTAGAGTTTAACTGAAAACTACAGAGATGATCATAACCCAACAGTATTTACCAGGACATTCTTTTATGCTCAACAACCTGTGTATGAACAATAATTTAAGGAGAGACAAGTTTATGGTTCAAATCCTTTTCATATAATGC

Coding sequence (CDS)

ATGGTTTCAGACCCCAAGTCCACTCTTTCGAAGCTCAAACCTGATGGCGGCTCCAGGTTAAAGCTTGAATCATCTGATCATAAGAAGAAGATTGACAGCTCCATCAAGAACTCAATTCCCTCTTCCAAGCACAAATCCGTCTCTCTTGTCACCAAATCTGAGGTAAAATCAAAGACAATTTCGAGTTCTTCAAAGACGACAACAAAGACTACAACAACTACTACTGCTACTGCTAAAGTGAGAGAAAAGAAAATCTTTAATTTGCCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATCTTCTACGAGTCCTTGTCGAAACAAATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAAGGCATATGAGAAGAAACTGAGAAGACAAAAGGAACAGAGAACGGGGACTCCGATTAAATCAGCATCAGCAAAACCCCTGAGCAGACCAGAGAGTTCCCAGAGGCCACAACCGCCATCCAAGAATGGTGATATAAAAGCAAAGAAAAAGATCATGAACGATAGTGACGATGACGACGACTTCATTTTAAGCCCCAAAAGAAGAAAAATGTAG

Protein sequence

MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSPKRRKM*

Homology

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BLAST of MELO3C011144T1 vs. TrEMBL
Match: A0A0A0LLY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G374600 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.2e-108
Identity = 202/205 (98.54%), Postives = 205/205 (100.00%), Query Frame = 1


Query: 1   MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTI 60
           MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTK+EVKSKTI
Sbjct: 1   MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTI 60

Query: 61  SSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE 120
           SSSSKTTTKTTTTTTATAKVREKK+FNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE
Sbjct: 61  SSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE 120

Query: 121 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI 180
           FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI
Sbjct: 121 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI 180

Query: 181 KAKKKIMNDSDDDDDFILSPKRRKM 206
           KAKKKI+NDSDDDDDFILSPKRRKM
Sbjct: 181 KAKKKIVNDSDDDDDFILSPKRRKM 205

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BLAST of MELO3C011144T1 vs. TrEMBL
Match: D7SUA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03410 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.3e-69
Identity = 143/191 (74.87%), Postives = 158/191 (82.72%), Query Frame = 1


Query: 14  PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTT 73
           P+  S+ K   S  KKK + S K ++  SK KSVS VTKSEVKSK+ SSSSKTTTKTTTT
Sbjct: 10  PESSSKGKAVVSVTKKKTEGSTKPTV-DSKQKSVSTVTKSEVKSKSASSSSKTTTKTTTT 69

Query: 74  TTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEK 133
                KVREKK++ LPGQK+DPPEEREPLRIFYESLSKQIP+SEMAEFWMMEHG+LSPEK
Sbjct: 70  V----KVREKKVYTLPGQKHDPPEEREPLRIFYESLSKQIPSSEMAEFWMMEHGLLSPEK 129

Query: 134 AKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDD 193
           AKKAYEKK RRQK+ R GTP+KS   KP SRPESSQRPQ  SKNGDIKAKK+I NDSDDD
Sbjct: 130 AKKAYEKKQRRQKQIRMGTPVKSP--KPPSRPESSQRPQQTSKNGDIKAKKRITNDSDDD 189

Query: 194 DDFILSPKRRK 205
           DDFILSPK+RK
Sbjct: 190 DDFILSPKKRK 193

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BLAST of MELO3C011144T1 vs. TrEMBL
Match: B9IKI7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s00280g PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 5.1e-64
Identity = 138/211 (65.40%), Postives = 165/211 (78.20%), Query Frame = 1


Query: 1   MVSDPKSTLSKLKPDG----GSRLKLESSDHKKKIDSSIKN---SIPSSKHKSVSLVTKS 60
           M ++ K ++ K+KP      GS+ K+ESS   KKI+SS K    S+  SK KS+S+VTK+
Sbjct: 1   MATESKQSVVKVKPSSSNFDGSKGKIESSMKAKKIESSNKQQQQSVVDSKDKSISVVTKT 60

Query: 61  EVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQI 120
           EVKSK+  SSSKTTT TTTT     +VR+KK+++LPGQ+YDPPEEREPLRIFYESLSKQI
Sbjct: 61  EVKSKSAPSSSKTTTTTTTT-----RVRQKKVYSLPGQRYDPPEEREPLRIFYESLSKQI 120

Query: 121 PASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQP 180
           P SEMAEFWMMEHG+LSPE+AKKA+EKK R+QK QR GTPIKS      S+PESSQ+ Q 
Sbjct: 121 PTSEMAEFWMMEHGLLSPERAKKAHEKKQRKQKMQRFGTPIKSTKPST-SKPESSQKQQQ 180

Query: 181 PSKNGDIKAKKKIMNDSDDDDDFILSPKRRK 205
            SKNGD+KAK+KI NDS DDDDFILS KRRK
Sbjct: 181 SSKNGDLKAKRKISNDS-DDDDFILSSKRRK 204

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BLAST of MELO3C011144T1 vs. TrEMBL
Match: A0A061GKS4_THECC (Translation initiation factor IF-2 OS=Theobroma cacao GN=TCM_047092 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.7e-64
Identity = 138/209 (66.03%), Postives = 165/209 (78.95%), Query Frame = 1


Query: 1   MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVS-LVTKSEVK 60
           M ++ +S L K+K    DG S+ K +++ ++KKI+SS K +   SK KSVS ++TK++VK
Sbjct: 1   MTTETRSNLVKVKTSGQDGSSKGKFDAAMNRKKIESSSKQAPVDSKQKSVSTVITKTQVK 60

Query: 61  SKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPAS 120
           SK  SSSSKTT  T T      KVREKK++ LPGQK+DPPEEREPLRIFYESLSKQIP S
Sbjct: 61  SKASSSSSKTTATTKT------KVREKKVYTLPGQKHDPPEEREPLRIFYESLSKQIPTS 120

Query: 121 EMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSK 180
           EMAEFWMMEHG+LSPEKA+KAYEKK RR KE RTGTPIK  S+KP S+PESSQ+ Q  SK
Sbjct: 121 EMAEFWMMEHGLLSPEKARKAYEKKQRRLKELRTGTPIK--SSKPSSKPESSQKHQLASK 180

Query: 181 NGDIKAKKKIMNDSDDDDDF-ILSPKRRK 205
           NGD+KAKK+I ND DDDDD+ ILSPKRRK
Sbjct: 181 NGDVKAKKRINNDIDDDDDYLILSPKRRK 201

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BLAST of MELO3C011144T1 vs. TrEMBL
Match: A0A067KQR0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07720 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 8.7e-64
Identity = 135/209 (64.59%), Postives = 166/209 (79.43%), Query Frame = 1


Query: 1   MVSDPKSTLSKLKP----DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVK 60
           M ++ K T++K+K     DG S++K++SS   KKI+SS K        K VS VTK+EVK
Sbjct: 1   MATESKQTVAKVKSSIHQDGSSKIKVDSSLKNKKIESSNK--------KPVSTVTKTEVK 60

Query: 61  SKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPAS 120
           SKT S++SKTTTKTTT      +VREKK+++LPGQKYDPPEEREPLRIFYESLSKQIP+S
Sbjct: 61  SKTASTTSKTTTKTTT------RVREKKVYSLPGQKYDPPEEREPLRIFYESLSKQIPSS 120

Query: 121 EMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSK 180
           EMAEFWMMEHG+LSPE+AKKAYEKK R+QK QR GTPIKS      ++PESSQ+ Q  SK
Sbjct: 121 EMAEFWMMEHGLLSPERAKKAYEKKQRKQKMQRLGTPIKS------TKPESSQKQQQASK 180

Query: 181 NGDIKAKKKIMNDSDDDDDFILSPKRRKM 206
           NGD+K+KK+I+ND +DDDDF+LSPKRRK+
Sbjct: 181 NGDLKSKKRIIND-NDDDDFVLSPKRRKL 188

[Close]

BLAST of MELO3C011144T1 vs. TAIR10
Match: AT5G11600.1 (AT5G11600.1 unknown protein)

HSP 1 Score: 181.0 bits (458), Expect = 7.3e-46
Identity = 100/207 (48.31%), Postives = 129/207 (62.32%), Query Frame = 1


Query: 1   MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTI 60
           + +  +  +S  KP          S+ K K+  +   +I ++   +  +  K++  S  +
Sbjct: 37  IATSSRPIMSDSKPRSSVSTVTAKSEAKPKVPINSVKTIATTSAAASLVKGKAQTTSTVV 96

Query: 61  SSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE 120
           S     TT  T +       REKK+++L GQK+DPPEEREPLRIFYESLSKQIP SEMAE
Sbjct: 97  SLVKAKTTSATVSLVKGKAKREKKVYSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAE 156

Query: 121 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNG-D 180
           FW+MEHGMLSPEKAK+A+EKK R+ K+ R GTP KSA     S+ ESSQR      NG D
Sbjct: 157 FWLMEHGMLSPEKAKRAFEKKQRKMKQIRMGTPSKSAPTFS-SKAESSQRTSASKNNGLD 216

Query: 181 IKAKKKIM-NDSDDDDDFILSPKRRKM 206
            + KKK++ +D DDDDDFILS KRRK+
Sbjct: 217 ARKKKKVVDDDDDDDDDFILSHKRRKV 242

[Close]

BLAST of MELO3C011144T1 vs. TAIR10
Match: AT1G19990.1 (AT1G19990.1 unknown protein)

HSP 1 Score: 128.6 bits (322), Expect = 4.3e-30
Identity = 82/226 (36.28%), Postives = 113/226 (50.00%), Query Frame = 1


Query: 7   STLSKLKPDGGS-----RLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVT-------KSE 66
           S+ +K KP  G+     +LK E +D     +  IK+S+  S+ K V           K  
Sbjct: 24  SSFAKKKPTNGNNAGSKKLKKEENDDDDDDNKPIKSSVSGSRAKPVKKKEEIDKDDEKKP 83

Query: 67  VKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIP 126
           V  +  S       K         K RE+K+++LPGQK + P+ER+PLRIFYESL KQIP
Sbjct: 84  VSKRNSSVGVSKENKKPEKEEEVKKKRERKVYDLPGQKREQPDERDPLRIFYESLYKQIP 143

Query: 127 ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPES------- 186
            S+MA+ W+ME G+L  EKAKK  EKKL  QK  +  +P+KSA++ P S  +S       
Sbjct: 144 TSDMAQIWLMESGLLPAEKAKKVLEKKL--QKGGKLSSPVKSAASTPRSNSKSVTVKKKE 203

Query: 187 ---------SQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSPKRRK 205
                    S + +        K +KK  +D D DDDF+ S   +K
Sbjct: 204 VQKSPSEALSNKKKGNDSKPTTKKRKKNSDDDDSDDDFLASRVSKK 247

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BLAST of MELO3C011144T1 vs. NCBI nr
Match: gi|659088508|ref|XP_008445018.1| (PREDICTED: neurofilament heavy polypeptide [Cucumis melo])

HSP 1 Score: 403.7 bits (1036), Expect = 2.0e-109
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1


Query: 1   MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTI 60
           MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTI
Sbjct: 1   MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTI 60

Query: 61  SSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE 120
           SSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE
Sbjct: 61  SSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE 120

Query: 121 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI 180
           FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI
Sbjct: 121 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI 180

Query: 181 KAKKKIMNDSDDDDDFILSPKRRKM 206
           KAKKKIMNDSDDDDDFILSPKRRKM
Sbjct: 181 KAKKKIMNDSDDDDDFILSPKRRKM 205

[Close]

BLAST of MELO3C011144T1 vs. NCBI nr
Match: gi|449465141|ref|XP_004150287.1| (PREDICTED: uncharacterized protein LOC101205851 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.7e-108
Identity = 202/205 (98.54%), Postives = 205/205 (100.00%), Query Frame = 1


Query: 1   MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTI 60
           MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTK+EVKSKTI
Sbjct: 67  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTI 126

Query: 61  SSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE 120
           SSSSKTTTKTTTTTTATAKVREKK+FNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE
Sbjct: 127 SSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE 186

Query: 121 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI 180
           FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI
Sbjct: 187 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI 246

Query: 181 KAKKKIMNDSDDDDDFILSPKRRKM 206
           KAKKKI+NDSDDDDDFILSPKRRKM
Sbjct: 247 KAKKKIVNDSDDDDDFILSPKRRKM 271

[Close]

BLAST of MELO3C011144T1 vs. NCBI nr
Match: gi|700207699|gb|KGN62818.1| (hypothetical protein Csa_2G374600 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.7e-108
Identity = 202/205 (98.54%), Postives = 205/205 (100.00%), Query Frame = 1


Query: 1   MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTI 60
           MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTK+EVKSKTI
Sbjct: 1   MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTI 60

Query: 61  SSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE 120
           SSSSKTTTKTTTTTTATAKVREKK+FNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE
Sbjct: 61  SSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAE 120

Query: 121 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI 180
           FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI
Sbjct: 121 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDI 180

Query: 181 KAKKKIMNDSDDDDDFILSPKRRKM 206
           KAKKKI+NDSDDDDDFILSPKRRKM
Sbjct: 181 KAKKKIVNDSDDDDDFILSPKRRKM 205

[Close]

BLAST of MELO3C011144T1 vs. NCBI nr
Match: gi|225429940|ref|XP_002283869.1| (PREDICTED: uncharacterized protein LOC100262893 [Vitis vinifera])

HSP 1 Score: 268.9 bits (686), Expect = 7.6e-69
Identity = 143/191 (74.87%), Postives = 158/191 (82.72%), Query Frame = 1


Query: 14  PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTT 73
           P+  S+ K   S  KKK + S K ++  SK KSVS VTKSEVKSK+ SSSSKTTTKTTTT
Sbjct: 10  PESSSKGKAVVSVTKKKTEGSTKPTV-DSKQKSVSTVTKSEVKSKSASSSSKTTTKTTTT 69

Query: 74  TTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEK 133
                KVREKK++ LPGQK+DPPEEREPLRIFYESLSKQIP+SEMAEFWMMEHG+LSPEK
Sbjct: 70  V----KVREKKVYTLPGQKHDPPEEREPLRIFYESLSKQIPSSEMAEFWMMEHGLLSPEK 129

Query: 134 AKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDD 193
           AKKAYEKK RRQK+ R GTP+KS   KP SRPESSQRPQ  SKNGDIKAKK+I NDSDDD
Sbjct: 130 AKKAYEKKQRRQKQIRMGTPVKSP--KPPSRPESSQRPQQTSKNGDIKAKKRITNDSDDD 189

Query: 194 DDFILSPKRRK 205
           DDFILSPK+RK
Sbjct: 190 DDFILSPKKRK 193

[Close]

BLAST of MELO3C011144T1 vs. NCBI nr
Match: gi|743921337|ref|XP_011004730.1| (PREDICTED: uncharacterized protein LOC105111150 isoform X4 [Populus euphratica])

HSP 1 Score: 254.2 bits (648), Expect = 1.9e-64
Identity = 138/211 (65.40%), Postives = 166/211 (78.67%), Query Frame = 1


Query: 1   MVSDPKSTLSKLKPDGG----SRLKLESSDHKKKIDSSI---KNSIPSSKHKSVSLVTKS 60
           M ++ K ++ K+KP  G    S+ K+ESS   KKI+SS    + S+  SK KS+S+VT++
Sbjct: 1   MATESKQSVVKVKPSSGNFDGSKGKIESSMKAKKIESSNTQQQQSVVDSKDKSISVVTQT 60

Query: 61  EVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQI 120
           EVKSK+  SSSKTTT TTTT     +VR+KK+++LPGQ+YDPPEEREPLRIFYESLSKQI
Sbjct: 61  EVKSKSAPSSSKTTTTTTTT-----RVRQKKVYSLPGQRYDPPEEREPLRIFYESLSKQI 120

Query: 121 PASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQP 180
           P SEMAEFWMMEHG+LSPE+AKKAYEKK R+QK QR GTPIKS      S+PESSQ+ Q 
Sbjct: 121 PTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKMQRFGTPIKSTKPST-SKPESSQKQQQ 180

Query: 181 PSKNGDIKAKKKIMNDSDDDDDFILSPKRRK 205
            SKNGD+KAK+KI NDS DDDDFILSPKRRK
Sbjct: 181 SSKNGDLKAKRKISNDS-DDDDFILSPKRRK 204

The following BLAST results are available for this feature:

BLAST of MELO3C011144T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLY4_CUCSA	1.2e-108	98.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G374600 PE=4 SV=1	[more]
D7SUA5_VITVI	5.3e-69	74.87	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03410 PE=4 SV=...	[more]
B9IKI7_POPTR	5.1e-64	65.40	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s00280g PE=4 SV=1	[more]
A0A061GKS4_THECC	6.7e-64	66.03	Translation initiation factor IF-2 OS=Theobroma cacao GN=TCM_047092 PE=4 SV=1	[more]
A0A067KQR0_JATCU	8.7e-64	64.59	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07720 PE=4 SV=1	[more]

BLAST of MELO3C011144T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11600.1	7.3e-46	48.31	unknown protein	[more]
AT1G19990.1	4.3e-30	36.28	unknown protein	[more]

BLAST of MELO3C011144T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088508\|ref\|XP_008445018.1\|	2.0e-109	100.00	PREDICTED: neurofilament heavy polypeptide [Cucumis melo]	[more]
gi\|449465141\|ref\|XP_004150287.1\|	1.7e-108	98.54	PREDICTED: uncharacterized protein LOC101205851 [Cucumis sativus]	[more]
gi\|700207699\|gb\|KGN62818.1\|	1.7e-108	98.54	hypothetical protein Csa_2G374600 [Cucumis sativus]	[more]
gi\|225429940\|ref\|XP_002283869.1\|	7.6e-69	74.87	PREDICTED: uncharacterized protein LOC100262893 [Vitis vinifera]	[more]
gi\|743921337\|ref\|XP_011004730.1\|	1.9e-64	65.40	PREDICTED: uncharacterized protein LOC105111150 isoform X4 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C011144	MELO3C011144	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C011144T1	MELO3C011144T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C011144T1.cds1	MELO3C011144T1.cds1	CDS
MELO3C011144T1.cds2	MELO3C011144T1.cds2	CDS
MELO3C011144T1.cds3	MELO3C011144T1.cds3	CDS
MELO3C011144T1.cds4	MELO3C011144T1.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33828	FAMILY NOT NAMED	coord: 18..205 score: 8.3
None	No IPR available	PANTHER	PTHR33828:SF1	SUBFAMILY NOT NAMED	coord: 18..205 score: 8.3