MELO3C011023T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C011023T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	50S ribosomal protein L6
Location	chr3 : 27008703 .. 27009846 (-)
Sequence length	923

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATATATATATAACCAACCCATTCAAAACACACAAAAATTAAAAGGAAAAGAAAAAAGGCCATTGATCAATTTGAAAGCCATGGTTCCCTTTCAATCCCACCCTTCTTCTCTAAATGACAAGACATCAGCAATTCAAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATGGTCCCGACGCCGCCACCCTTGAACTCCGTATTAGATATCGAACTTCACCTCGAAACTCCATTACCTTTCTATTGGCAAAGGTGTCTCGACATCCAGGTCTTTTCTTTTCTCCTGACAAACCTCTATTTGTTGTATGTTTTCTCTATTTGCTAAAGTGGTTATATTCTAAAATTTACTGTGCTTAAGTGGTTTTTAGGCATATCGATCCGTGATTTTATATAGTATCAAAATAGGAGGTTTTATATTAGCTTTTTGGATTCTTAAATTAATCTCAATAGAGTTAAAAAAGTGTGGTGATTTCCTTTTTCCATTTTCAGTCGGGAAAGATACACTTTTACAACATGACGACTCAAAAGAGAACATGGAGAGATCCAAGGGACAAACTCGTCGATAAAGATGATGATGATGATGACGAAGAAGGAAAAGATGACGACTGCTATGACAAGAACGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCCATGGACAAGAACAACAACAATCAAACCGTACAAGGTGTGCGTCGCGCTATAAATAACGGAATGGTGTTTGGGTTGTCGGAGAATTACAACAACAACAACAACAAAAAGGCGGAGATGGTGGCAGCCGTTTGCATGAGGTGTCATTTGTTAGTGATGTTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACGTCGCCGGCGATGTCCAAGCGCCGGTGTCATCTTTCTTGGTAATAAAAGTGATAATTATATATTATATTATAAAGTTAGGAGAAAAATGAAAAACTCTTTAATATAATTAATTATAATGATTCTCTTTAATTGTAACTTTGTATTTATTGTAGGACGAGACCCTCAAACTTTCTTCTTTGTAATTTGTATATATACAAATGTGTGTTTCATTTGTTATAAATATCCCAAAGTTCTTTCAAATTGGTTTG

mRNA sequence

ATATATATATATAACCAACCCATTCAAAACACACAAAAATTAAAAGGAAAAGAAAAAAGGCCATTGATCAATTTGAAAGCCATGGTTCCCTTTCAATCCCACCCTTCTTCTCTAAATGACAAGACATCAGCAATTCAAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATGGTCCCGACGCCGCCACCCTTGAACTCCGTATTAGATATCGAACTTCACCTCGAAACTCCATTACCTTTCTATTGGCAAAGGTGTCTCGACATCCAGTCGGGAAAGATACACTTTTACAACATGACGACTCAAAAGAGAACATGGAGAGATCCAAGGGACAAACTCGTCGATAAAGATGATGATGATGATGACGAAGAAGGAAAAGATGACGACTGCTATGACAAGAACGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCCATGGACAAGAACAACAACAATCAAACCGTACAAGGTGTGCGTCGCGCTATAAATAACGGAATGGTGTTTGGGTTGTCGGAGAATTACAACAACAACAACAACAAAAAGGCGGAGATGGTGGCAGCCGTTTGCATGAGGTGTCATTTGTTAGTGATGTTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACGTCGCCGGCGATGTCCAAGCGCCGGTGTCATCTTTCTTGGTAATAAAAGTGATAATTATATATTATATTATAAAGTTAGGAGAAAAATGAAAAACTCTTTAATATAATTAATTATAATGATTCTCTTTAATTGTAACTTTGTATTTATTGTAGGACGAGACCCTCAAACTTTCTTCTTTGTAATTTGTATATATACAAATGTGTGTTTCATTTGTTATAAATATCCCAAAGTTCTTTCAAATTGGTTTG

Coding sequence (CDS)

ATGGTTCCCTTTCAATCCCACCCTTCTTCTCTAAATGACAAGACATCAGCAATTCAAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATGGTCCCGACGCCGCCACCCTTGAACTCCGTATTAGATATCGAACTTCACCTCGAAACTCCATTACCTTTCTATTGGCAAAGGTGTCTCGACATCCAGTCGGGAAAGATACACTTTTACAACATGACGACTCAAAAGAGAACATGGAGAGATCCAAGGGACAAACTCGTCGATAAAGATGATGATGATGATGACGAAGAAGGAAAAGATGACGACTGCTATGACAAGAACGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCCATGGACAAGAACAACAACAATCAAACCGTACAAGGTGTGCGTCGCGCTATAAATAACGGAATGGTGTTTGGGTTGTCGGAGAATTACAACAACAACAACAACAAAAAGGCGGAGATGGTGGCAGCCGTTTGCATGAGGTGTCATTTGTTAGTGATGTTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACGTCGCCGGCGATGTCCAAGCGCCGGTGTCATCTTTCTTGGTAA

Protein sequence

MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLELNLTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW*

Homology

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BLAST of MELO3C011023T1 vs. TrEMBL
Match: A0A0A0LNT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368900 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.2e-110
Identity = 197/212 (92.92%), Postives = 206/212 (97.17%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDK-TSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFY 60
           MVPFQSHPSSLNDK TSAIQEPADNLAKKRKWEESM+PTPP LNSVLDIELHLETPLPFY
Sbjct: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPP-LNSVLDIELHLETPLPFY 60

Query: 61  WQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLEL 120
           WQRCLDIQSGKIHFYNMTTQKRTW+DPRDKL +KDDDDDDEE  DD+ YDKNDMSLDLEL
Sbjct: 61  WQRCLDIQSGKIHFYNMTTQKRTWKDPRDKL-EKDDDDDDEE--DDNRYDKNDMSLDLEL 120

Query: 121 NLTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLC 180
           NLTCESM+KNNN+QTVQGVRRAIN+GM+FGLSENYN+NNNKKAEMVAAVCMRCHLLVMLC
Sbjct: 121 NLTCESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLC 180

Query: 181 KSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW 212
           KSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW
Sbjct: 181 KSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW 208

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BLAST of MELO3C011023T1 vs. TrEMBL
Match: E0CRK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05580 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.5e-36
Identity = 99/227 (43.61%), Postives = 123/227 (54.19%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEES-------MVPTPPPLNSVLDIELHLE 60
           MV FQ+  S   D T  I    +NL+KKRKWE++       +        S+ DIEL LE
Sbjct: 1   MVSFQTPLSP--DPTRPIVSEFENLSKKRKWEKTGTEEVFKLQSKAKSTKSIFDIELQLE 60

Query: 61  TPLPFYWQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDM 120
           TPLP  WQRCLDIQSG+IHFYN  T KRT RDPR                  +      M
Sbjct: 61  TPLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPR---------------ASPEPPSPGPM 120

Query: 121 SLDLELNLTCESMDKN---------NNNQTVQGVRRAINNGMVFGL--SENYNNNNNKKA 180
           SL+LELNL C+S+ +N         N+       + ++      G+  S ++        
Sbjct: 121 SLELELNLPCDSLRRNRPDDNMGKWNSGSPSHNSKESLQKKNPGGVACSPSWLAFEGDNQ 180

Query: 181 EMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKRRCHL 210
           EMVAAVC RCH+LVMLCKSSP CPNCKFM+ PP+QT P + KRR  L
Sbjct: 181 EMVAAVCKRCHMLVMLCKSSPTCPNCKFMH-PPDQTPPNLFKRRFSL 209

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BLAST of MELO3C011023T1 vs. TrEMBL
Match: B9RJJ6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1035140 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.7e-35
Identity = 98/231 (42.42%), Postives = 128/231 (55.41%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMV-------PTPPPLNS--VLDIELH 60
           MV  Q+  +S N + + I E  DN +KKRKW+E            PP  N+  + +IEL 
Sbjct: 1   MVSLQAAATSPNRRETIISE-VDNSSKKRKWDEPQTYGTFEKRSKPPNQNTKPIFEIELQ 60

Query: 61  LETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKN 120
           LETPLP  WQ+CLDIQSG+IHFYN  T+KRT RDPR               +  +     
Sbjct: 61  LETPLPLEWQQCLDIQSGEIHFYNTRTKKRTSRDPR---------------RSPEPPSPG 120

Query: 121 DMSLDLELNL-TCESMDKNN-NNQTVQGVRRAINNGMVFGLSENYNNNNNKK-------- 180
            MSLDLEL+L  CES  KNN N+ ++    +   +  +    E+ ++    K        
Sbjct: 121 HMSLDLELHLQPCESQRKNNANDHSLASSIQGFGDLFMDSSKEDKSSEGTIKRCPSWIVE 180

Query: 181 ---AEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKRRCHL 210
               EMVA VC RCH+LVMLCKSSP CPNCKFM+ PP+Q+ P + K+R  L
Sbjct: 181 GDQEEMVATVCTRCHMLVMLCKSSPACPNCKFMH-PPDQSPPKLFKQRFSL 214

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BLAST of MELO3C011023T1 vs. TrEMBL
Match: A0A0D2QM72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.3e-34
Identity = 99/234 (42.31%), Postives = 123/234 (52.56%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMV----------PTPPPLNSVLDIEL 60
           M+ FQ+ P S +D         DN +KKRK EE                  + SV D+EL
Sbjct: 1   MISFQA-PLSPSDMIGKTISEFDNSSKKRKLEEDSQGDHEETSDKRSKAESIKSVFDMEL 60

Query: 61  HLETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDK 120
           HLETPLP  WQRCLDIQSG+IHFYN  T KRT +DPR               +  +    
Sbjct: 61  HLETPLPLEWQRCLDIQSGQIHFYNTRTHKRTSKDPR---------------RSPEPPSP 120

Query: 121 NDMSLDLELNLTCESMDKNNNNQTVQ--------------GVRRAINNGMVFGLSENYN- 180
             MSLDLELNL C+S  +  N +  Q               V + IN+    GL+ N + 
Sbjct: 121 VHMSLDLELNLPCDSSVRKVNEKDHQLFNKHNSVGPTRAGSVDKKINSS--GGLTRNLSW 180

Query: 181 ----NNNNKKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKR 206
                N+ +  EMVA VCMRCH+LVMLCKSSP CPNCKFM+ PP+Q  P + K+
Sbjct: 181 LAVEENDQQDQEMVATVCMRCHMLVMLCKSSPACPNCKFMH-PPDQGPPKLFKQ 215

[Close]

BLAST of MELO3C011023T1 vs. TrEMBL
Match: A0A0A0LHX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895830 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.7e-33
Identity = 90/187 (48.13%), Postives = 110/187 (58.82%), Query Frame = 1


Query: 28  KRKWEESMVPTPPPLNSVLD-IELHLETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWRDP 87
           KRKWE+   P     NS  D IELHLETPLP  WQRCLDIQSG+IHF+N  TQKRT  DP
Sbjct: 2   KRKWED---PQGDNFNSPTDNIELHLETPLPLEWQRCLDIQSGEIHFFNTKTQKRTSMDP 61

Query: 88  RDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLELNLTCESMDK---NNNNQTVQGVRRAIN 147
           R    +K +       +     D   +SLDLELNL C+S  K   NNN+ T  G+ +   
Sbjct: 62  RR---NKLEGPTTTPNRSFHASDHQALSLDLELNLNCQSKKKIMSNNNDDTGGGLLKLQA 121

Query: 148 NGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLCKSSPECPNCKFM-----------N 200
           N   +G+S  +     ++ EMVA VCM+CHLLVML KSSP CPNCKF+           N
Sbjct: 122 NN--YGISCPWLRFEREQQEMVARVCMQCHLLVMLLKSSPTCPNCKFIHPITDHHQYLQN 180

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BLAST of MELO3C011023T1 vs. TAIR10
Match: AT4G08910.1 (AT4G08910.1 unknown protein)

HSP 1 Score: 77.8 bits (190), Expect = 9.0e-15
Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = 1


Query: 94  DDDDDDEEGKDDDCYDKNDMSLDLELNLTCESMDKNNNN---------QTVQGVRRAINN 153
           ++D  +     ++ Y+ + MSLDLELNL+   +D N+++         +  +  ++ +  
Sbjct: 68  NEDSKNMNNNIEEGYNHHHMSLDLELNLSPSLIDLNHHHDLSNYNKGYEEDERKKKMMEK 127

Query: 154 GMVFGLSENYNNNN------------------NKKAEMVAAVCMRCHLLVMLCKSSPECP 200
           G V GL    + +                     + EMVA VCM+CH+LVMLCK+SP CP
Sbjct: 128 GSVLGLETKKSMSRVAFDLDDDCCDRGDGVGGRSEEEMVARVCMKCHMLVMLCKASPACP 187

[Close]

BLAST of MELO3C011023T1 vs. TAIR10
Match: AT1G78170.1 (AT1G78170.1 unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 9.9e-14
Identity = 66/219 (30.14%), Postives = 88/219 (40.18%), Query Frame = 1


Query: 20  EPADNLAKKRKWEESMV-------PTPPPLNSV-LDIELHLETPLPFYWQRCLDIQSGKI 79
           E   N  KK K E+          P    + S+  D ELHL TPLP  WQ          
Sbjct: 21  EEFHNSFKKSKQEDQSQSTLFNERPKSESMRSITFDFELHLHTPLPSDWQT--------- 80

Query: 80  HFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLELNLT--------- 139
                            K   +  D+     KD   + +  MSLDLELNL+         
Sbjct: 81  -----------------KGYSRTSDEHRAYPKDPVIFGQPKMSLDLELNLSPSGSPSRTT 140

Query: 140 ---CESMDKNNNNQTVQGVRRAINNG----MVFGLSENY----------NNNNNKKAEMV 199
               ES   +N   +   ++   N      +  GLS +           N+ ++K  EMV
Sbjct: 141 TKKYESSSIHNETVSSSKIKVLTNTSKKSIIGTGLSRSPSWLAFEGGDDNDVDHKGQEMV 200

Query: 200 AAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSK 205
             VCM+CH+LVMLC S+P CPNCKFM+ P + +S  + K
Sbjct: 201 TTVCMKCHMLVMLCTSTPVCPNCKFMH-PHDHSSTKLFK 212

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BLAST of MELO3C011023T1 vs. TAIR10
Match: AT1G22250.1 (AT1G22250.1 unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11
Identity = 38/101 (37.62%), Postives = 50/101 (49.50%), Query Frame = 1


Query: 112 DMSLDLELNLTCESMDKNNNNQTVQGVRRAINNGMVF------------GLS-------- 171
           D   DL+LNL   S   ++  +T+         G V             GLS        
Sbjct: 80  DHRTDLDLNLNLYSSSSSSVKKTIMEKDECSKGGTVIISPSKKVRSGDIGLSRSPSWLAF 139

Query: 172 ENYNNNNNKKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMN 193
           E  +++N KK EM+  VCM+CH+LVMLCKS+  CPNCKFM+
Sbjct: 140 EGDDDDNQKKQEMITTVCMKCHMLVMLCKSTLVCPNCKFMH 180

[Close]

BLAST of MELO3C011023T1 vs. NCBI nr
Match: gi|659088139|ref|XP_008444823.1| (PREDICTED: uncharacterized protein LOC103488058 [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 6.5e-124
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFYW 60
           MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFYW
Sbjct: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFYW 60

Query: 61  QRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLELN 120
           QRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLELN
Sbjct: 61  QRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLELN 120

Query: 121 LTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLCK 180
           LTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLCK
Sbjct: 121 LTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLCK 180

Query: 181 SSPECPNCKFMNSPPEQTSPAMSKRRCHLSW 212
           SSPECPNCKFMNSPPEQTSPAMSKRRCHLSW
Sbjct: 181 SSPECPNCKFMNSPPEQTSPAMSKRRCHLSW 211

[Close]

BLAST of MELO3C011023T1 vs. NCBI nr
Match: gi|449469873|ref|XP_004152643.1| (PREDICTED: uncharacterized protein LOC101203360 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 3.1e-110
Identity = 197/212 (92.92%), Postives = 206/212 (97.17%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDK-TSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFY 60
           MVPFQSHPSSLNDK TSAIQEPADNLAKKRKWEESM+PTPP LNSVLDIELHLETPLPFY
Sbjct: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPP-LNSVLDIELHLETPLPFY 60

Query: 61  WQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLEL 120
           WQRCLDIQSGKIHFYNMTTQKRTW+DPRDKL +KDDDDDDEE  DD+ YDKNDMSLDLEL
Sbjct: 61  WQRCLDIQSGKIHFYNMTTQKRTWKDPRDKL-EKDDDDDDEE--DDNRYDKNDMSLDLEL 120

Query: 121 NLTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLC 180
           NLTCESM+KNNN+QTVQGVRRAIN+GM+FGLSENYN+NNNKKAEMVAAVCMRCHLLVMLC
Sbjct: 121 NLTCESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLC 180

Query: 181 KSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW 212
           KSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW
Sbjct: 181 KSSPECPNCKFMNSPPEQTSPAMSKRRCHLSW 208

[Close]

BLAST of MELO3C011023T1 vs. NCBI nr
Match: gi|225459312|ref|XP_002284166.1| (PREDICTED: uncharacterized protein LOC100262645 [Vitis vinifera])

HSP 1 Score: 159.8 bits (403), Expect = 5.1e-36
Identity = 99/227 (43.61%), Postives = 123/227 (54.19%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEES-------MVPTPPPLNSVLDIELHLE 60
           MV FQ+  S   D T  I    +NL+KKRKWE++       +        S+ DIEL LE
Sbjct: 1   MVSFQTPLSP--DPTRPIVSEFENLSKKRKWEKTGTEEVFKLQSKAKSTKSIFDIELQLE 60

Query: 61  TPLPFYWQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDM 120
           TPLP  WQRCLDIQSG+IHFYN  T KRT RDPR                  +      M
Sbjct: 61  TPLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPR---------------ASPEPPSPGPM 120

Query: 121 SLDLELNLTCESMDKN---------NNNQTVQGVRRAINNGMVFGL--SENYNNNNNKKA 180
           SL+LELNL C+S+ +N         N+       + ++      G+  S ++        
Sbjct: 121 SLELELNLPCDSLRRNRPDDNMGKWNSGSPSHNSKESLQKKNPGGVACSPSWLAFEGDNQ 180

Query: 181 EMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAMSKRRCHL 210
           EMVAAVC RCH+LVMLCKSSP CPNCKFM+ PP+QT P + KRR  L
Sbjct: 181 EMVAAVCKRCHMLVMLCKSSPTCPNCKFMH-PPDQTPPNLFKRRFSL 209

[Close]

BLAST of MELO3C011023T1 vs. NCBI nr
Match: gi|470132092|ref|XP_004301920.1| (PREDICTED: uncharacterized protein LOC101299013 [Fragaria vesca subsp. vesca])

HSP 1 Score: 157.5 bits (397), Expect = 2.5e-35
Identity = 94/212 (44.34%), Postives = 121/212 (57.08%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMV---------PTPPPLN--SVLDIE 60
           MV FQ+ P S N K S I + ++N  KKRKW++            P    +   S  D+E
Sbjct: 1   MVSFQAQPLSPNQKRS-ITDDSENSCKKRKWDDPFPFLELDKRSKPAADQIRPKSFFDVE 60

Query: 61  LHLETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYD 120
           LHLETPLP  WQRCLDIQSG+IHFYN  TQ +T RDPR     +    +           
Sbjct: 61  LHLETPLPLEWQRCLDIQSGQIHFYNTRTQMKTSRDPRRSTTPEPPSTN----------- 120

Query: 121 KNDMSLDLELNLTCESMDKNNNNQTVQGVRRAI--NNGMVFGLSENYNNNNNKKAEMVAA 180
            + MSLDLELNL C+S  + ++ +      RA+  NN    GL  +++       EMVA 
Sbjct: 121 -HHMSLDLELNLRCDS--QPHHPEISPNSFRALFKNNSSRLGLELDHDQ------EMVAT 180

Query: 181 VCMRCHLLVMLCKSSPECPNCKFMNSPPEQTS 200
           VCMRCH+LVMLCKSSP CPNCK+M++P +  S
Sbjct: 181 VCMRCHMLVMLCKSSPACPNCKYMHTPDQSPS 191

[Close]

BLAST of MELO3C011023T1 vs. NCBI nr
Match: gi|657942393|ref|XP_008374058.1| (PREDICTED: uncharacterized protein LOC103437334 [Malus domestica])

HSP 1 Score: 156.4 bits (394), Expect = 5.6e-35
Identity = 94/223 (42.15%), Postives = 131/223 (58.74%), Query Frame = 1


Query: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEE-------------SMVPTPPPLNSVLD 60
           M+ FQ+HP S N K +     ++N +KKRKW++             S VP   P NS+ D
Sbjct: 1   MLSFQAHPLSPNQKKTI--PDSENSSKKRKWDDLPYVNIEQLSEKRSKVPQSKP-NSLFD 60

Query: 61  IELHLETPLPFYWQRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDC 120
           IELHLETPLP  WQRCLDIQSG+IHFYN  TQ +T RDPR     +  +       D   
Sbjct: 61  IELHLETPLPLEWQRCLDIQSGQIHFYNTRTQMKTSRDPR-----RSPEPPTSPAAD--- 120

Query: 121 YDKNDMSLDLELNL-TCESMDKNNNNQT-------VQGVRRAINNGMVFGLSENYNNNNN 180
           +  + MSLDLELNL +C+    N++  T       ++  R    N    G   +++++  
Sbjct: 121 HHHHHMSLDLELNLRSCDQSRANSDISTHSLSDLFMESHRPTKKNPNNLGFPFDHHHH-- 180

Query: 181 KKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTSPAM 203
            + EMVA VC++CH+LVMLC+SSP CPNCK+M++ P+Q+ P +
Sbjct: 181 -QQEMVATVCLKCHMLVMLCRSSPXCPNCKYMHA-PDQSPPTL 208

The following BLAST results are available for this feature:

BLAST of MELO3C011023T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNT8_CUCSA	2.2e-110	92.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368900 PE=4 SV=1	[more]
E0CRK2_VITVI	3.5e-36	43.61	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05580 PE=4 SV=...	[more]
B9RJJ6_RICCO	8.7e-35	42.42	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1035140 PE=4 SV=1	[more]
A0A0D2QM72_GOSRA	3.3e-34	42.31	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G237500 PE=4 SV=1	[more]
A0A0A0LHX2_CUCSA	3.7e-33	48.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895830 PE=4 SV=1	[more]

BLAST of MELO3C011023T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08910.1	9.0e-15	34.59	unknown protein	[more]
AT1G78170.1	9.9e-14	30.14	unknown protein	[more]
AT1G22250.1	2.7e-11	37.62	unknown protein	[more]

BLAST of MELO3C011023T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088139\|ref\|XP_008444823.1\|	6.5e-124	100.00	PREDICTED: uncharacterized protein LOC103488058 [Cucumis melo]	[more]
gi\|449469873\|ref\|XP_004152643.1\|	3.1e-110	92.92	PREDICTED: uncharacterized protein LOC101203360 [Cucumis sativus]	[more]
gi\|225459312\|ref\|XP_002284166.1\|	5.1e-36	43.61	PREDICTED: uncharacterized protein LOC100262645 [Vitis vinifera]	[more]
gi\|470132092\|ref\|XP_004301920.1\|	2.5e-35	44.34	PREDICTED: uncharacterized protein LOC101299013 [Fragaria vesca subsp. vesca]	[more]
gi\|657942393\|ref\|XP_008374058.1\|	5.6e-35	42.15	PREDICTED: uncharacterized protein LOC103437334 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C011023	MELO3C011023	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C011023T1	MELO3C011023T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C011023T1.cds2	MELO3C011023T1.cds2	CDS
MELO3C011023T1.cds1	MELO3C011023T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	PROFILE	PS50020	WW_DOMAIN_2	coord: 54..88 score: 11
IPR001202	WW domain	unknown	SSF51045	WW domain	coord: 54..88 score: 2.8
None	No IPR available	GENE3D	G3DSA:2.20.70.10		coord: 53..89 score: 4.
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 48..206 score: 8.5
None	No IPR available	PANTHER	PTHR14791:SF28	SUBFAMILY NOT NAMED	coord: 48..206 score: 8.5