MELO3C010410T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C010410T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProbable N-glycosylase/DNA lyase
Locationchr7 : 10026517 .. 10026843 (+)
Sequence length327
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAGAAGACGTTGAAGGAGCAATTTAGAAAGTGGCAAGATGAGAAGGCGAAAAGAAAGCCTCAAAATAATGAAGGGGAAGAAGGCAAGGAAAGTGACTCAGAAAAACCACTCTCCTTTACCAAAGTTAGTAAACAATTCATGATAGAGAAGGGGCTCTATCCATATCAAAGAGCCATGCCAGGGTTCCTCACGATACCCATTCAAGCGTTCAAATGGAAGAGATTTTTTCAAGGGGTGATTGCAATAATACCTGACGTAGTGAAGATGTTCTACAAGGGATACATTAATGAAGAAGAGCACTACGTCACGGTAAAAGGGTAG

mRNA sequence

ATGAAAAAGAAGACGTTGAAGGAGCAATTTAGAAAGTGGCAAGATGAGAAGGCGAAAAGAAAGCCTCAAAATAATGAAGGGGAAGAAGGCAAGGAAAGTGACTCAGAAAAACCACTCTCCTTTACCAAAGTTAGTAAACAATTCATGATAGAGAAGGGGCTCTATCCATATCAAAGAGCCATGCCAGGGTTCCTCACGATACCCATTCAAGCGTTCAAATGGAAGAGATTTTTTCAAGGGGTGATTGCAATAATACCTGACGTAGTGAAGATGTTCTACAAGGGATACATTAATGAAGAAGAGCACTACGTCACGGTAAAAGGGTAG

Coding sequence (CDS)

ATGAAAAAGAAGACGTTGAAGGAGCAATTTAGAAAGTGGCAAGATGAGAAGGCGAAAAGAAAGCCTCAAAATAATGAAGGGGAAGAAGGCAAGGAAAGTGACTCAGAAAAACCACTCTCCTTTACCAAAGTTAGTAAACAATTCATGATAGAGAAGGGGCTCTATCCATATCAAAGAGCCATGCCAGGGTTCCTCACGATACCCATTCAAGCGTTCAAATGGAAGAGATTTTTTCAAGGGGTGATTGCAATAATACCTGACGTAGTGAAGATGTTCTACAAGGGATACATTAATGAAGAAGAGCACTACGTCACGGTAAAAGGGTAG

Protein sequence

MKKKTLKEQFRKWQDEKAKRKPQNNEGEEGKESDSEKPLSFTKVSKQFMIEKGLYPYQRAMPGFLTIPIQAFKWKRFFQGVIAIIPDVVKMFYKGYINEEEHYVTVKG*
Homology
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BLAST of MELO3C010410T1 vs. NCBI nr
Match: gi|659083323|ref|XP_008442290.1| (PREDICTED: stress response protein NST1-like [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-08
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 1 

Query: 1   MKKKTLKEQFRKWQDEKAKRKPQNNEGEEGKESDSEKPLSFTKVSKQFMIEKGLYPYQRA 60
           MKKK L++QF K + EK +R PQ    +E + S+ E  LS   VS  FM EKGLYPY+R 
Sbjct: 106 MKKKVLRDQFAKRRKEKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRN 165

Query: 61  MPGFLTIPIQAFK 74
           M  FL  PI+ F+
Sbjct: 166 MSQFLEAPIRVFR 178

The following BLAST results are available for this feature:
BLAST of MELO3C010410T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659083323|ref|XP_008442290.1|1.0e-0849.32PREDICTED: stress response protein NST1-like [Cucumis melo][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C010410MELO3C010410gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C010410T1MELO3C010410T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C010410T1.cds1MELO3C010410T1.cds1CDS