MELO3C010360T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C010360T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPlant-specific GATA-type zinc finger transcription factor family protein
Locationchr2 : 16907413 .. 16907586 (+)
Sequence length174
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCAAAGAGGCCACTGAAGGAGAAGAAAGAGACCCCTGTCGCCATTAAACCTCAGTGGAGTTTAGGGCCCATCTCCTCAGCGGCACAACCTACCAAGCATAAGAGTGGGTTCAAGAAGAGAGAGACTGAAAAAAGCAAACCTAAACCATTAAAGGGGATGAAGAAGTAG

mRNA sequence

ATGGGAGCAAAGAGGCCACTGAAGGAGAAGAAAGAGACCCCTGTCGCCATTAAACCTCAGTGGAGTTTAGGGCCCATCTCCTCAGCGGCACAACCTACCAAGCATAAGAGTGGGTTCAAGAAGAGAGAGACTGAAAAAAGCAAACCTAAACCATTAAAGGGGATGAAGAAGTAG

Coding sequence (CDS)

ATGGGAGCAAAGAGGCCACTGAAGGAGAAGAAAGAGACCCCTGTCGCCATTAAACCTCAGTGGAGTTTAGGGCCCATCTCCTCAGCGGCACAACCTACCAAGCATAAGAGTGGGTTCAAGAAGAGAGAGACTGAAAAAAGCAAACCTAAACCATTAAAGGGGATGAAGAAGTAG

Protein sequence

MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK*
Homology
[Close]
BLAST of MELO3C010360T1 vs. TrEMBL
Match: A0A0A0LWE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G320330 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-24
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 58
          MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK
Sbjct: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 57

[Close]
BLAST of MELO3C010360T1 vs. NCBI nr
Match: gi|700210218|gb|KGN65314.1| (hypothetical protein Csa_1G320330 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 2.1e-24
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 58
          MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK
Sbjct: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 57

The following BLAST results are available for this feature:
BLAST of MELO3C010360T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWE6_CUCSA1.5e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G320330 PE=4 SV=1[more]
BLAST of MELO3C010360T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210218|gb|KGN65314.1|2.1e-24100.00hypothetical protein Csa_1G320330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C010360MELO3C010360gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C010360T1.cds1MELO3C010360T1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C010360T1MELO3C010360T1-proteinpolypeptide