MELO3C010041T2 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C010041T2
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSimilar to ATP-dependent RNA helicase
Locationchr2 : 11632868 .. 11636335 (+)
Sequence length700
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTGGGACCTGTTGCAATTCGGGAAAAGACGAACCGACCATGCCTTTTTGCTTTCCTTGATTGTTTCCTCGAAGGTCCCTTCAATTCTTCCCCTGTAAGGTCCTTTTTCTCATTGGTTGTTTGTTCAACTTTTTGATTTTCTGATGATCTTCTCACTAATTTCATTCCCTCAACTGTACTTGAATGCCCATGTGAATTTATTTGCTCCTTGTTCTCTCGGATTTTTCCCTTCTGTTTCTGTTTGATGCTCTTTGTTTCTTCGTTTTCAGTTTAAATCTGTTTCTGGGTTAGTGGGGATTTCAGTTTTCATCGGCATTGTGCATTGTTTTTGGTTTGGGTACCTGCATTGGTTCTTTTTTTTGTAATAAACAATGTGTTTACATTTGTGCAGTTAAGAACGCGGGATGGCGTCGAATATGGAAACCGAGAATGAACAGCTAGTGGCTGATCCTTTGTCATTTGCCAGAAGGTTGTGTTGTGCGCAATGTTTTCTTTTTGGCTGCGTCATGCTTTACTTTCCTTTTATCTTATTAGAAGCTTTTGAATGTTTTTTTTTCTTTTGTTTTTTTGTTCGTTGGATTGTTGAAGTTAGCAATGTTCCTTGTATCTTATGATGGGTGATTGTTGCAGTTACCAGTTGGAAGGATTGGAAAAAGCACTTAAACAGAACACGATAGTGTTTTTAGAAACTGGCTCTGGGAAAACTTTGATTGCCATCATGCTTTTGCGCAGCTTTGCTCATCAACTACGCAAACCTTCACCCTTCGTTGCTGTTTTCTTAGTTCCACAAGTTGTTTTGGTTACTCAAGTATGAACAGATTCTCTCCCTCTCTATGTTTTGCAAGGGAAGCTAAACAATAACTTCTATTAATAATCAAAGAGATCACAAATGGCATGGTCAACTGGGGAACTAAACATATCATCCGAATTTTGGTTTGCATAATATATGGAGTAGTTACATGAGAGCTTATTAAGAACAGTCCAGCAAGTGGATGTATATTGTTGAAGAGCAAAAAATGACAATGATCTATAGTGCACTTATCACACAAAATCCTGTTCTTTCTCTCCAACCAAATGGATGGACCTGTTAGGGTTTTGTGGAGCCTGAGTGATATAGTTACAACTTTAGGAAACATCAAATGAAATGGAACCCATTCCAACGGAAGCTCTAGCAGTTCAGGTTTCTGATGTGCAACTGTAATTCAATAAAAGGCGGTTTAGAGTATTTTGTTCTTCTTCTTCACAGATGCAGTCTTTTCTATGTTTAGATTCTATTTCTAACATAAATTTATAATAATTATCTATGGATATAGGACAATTTGGCCTGGTGAAAATTAAACTCATATTCTTACTATTTGATTCAGTTGGTTTCTCAAGTTTATTGAAAGAATGTAGAAAATATCTTTTAATTGCGAGTTAGATGTTGGTAATGATCCAGTGATTCTTGTTGTTAATTAGAGATACTAATTTTGAACATGATTAATTATTTTTTCAAAAAGGTAGAGATTCCAGAAGGATTATAGGGAACTCTAAGCAAACATTATGATTATTGTTTTAGTTTGGAGGCTCATTTTTCCACCACTCACAGTTTTGTCCATTATGTTTTGTAATTTTAGCAAGCTGAAGCTTTGAAGATGCATACCGACTTGAGCGTTGGTTTGTATTATGGAGATATGGGGATAGACTTTTGGGATGGTGCAATTTGGAAGCGAGAAATAGAAAAACATGAGGTAATGTGTATCTTTGCATTTTTTTTTAATATTGATGTTCATTCATTAGTTGTTGACATATACTCCATTCTATTAATTATTTTTTCCTTTTACTGAAATGTCTAATACAATACTATTGGCTTCTTCATGTTAATGTCATTTTCCATTTATATGACATGCCATCTAAATTCCTTGTCTACTCTTTTCATGCTACTGGTACCATTTTTTTCTGATATATTTTTGACATATTAGGTGCTTGTGATGACTCCTGCAATTTTGCTAAATGGCTTGAGGCATAGCTTCTTTCATATAAGCATGATAAAGGTCTTAGTATTGGATGAATGCCATCATGCCAGAGGCAAACACCCCTATGCTTGTATTATGACGGTACTTTTTATCATACTGTCTAATTTTAGGATACTTGGATAAAATAGGTATAAGTTCTTTTATTATTGAAACTATTTTCTTATTGTACCTTTTCTTTTGTCTTCAACCACAAACTTCTTTACCTTTTTATGTATATTTGTCGTGAATTTAATCTTTTAGCCACCTGCTAAGAACCATGTATATGAGAACGAGACACATATACAACATGGGCATGCCAACCGGCCTCGACACATCATTTAAAAAAAAAAATCTAAAACATGGACATGACAAGGACATGTCTATTAAAACGTACATTTTAAAAAGTGTATCAATATTTTTATACAAGGATATAGAATGATAAAGAATCCCTTCTTATTGAAAGAAACTCAGGAAAATATATCCTCTAGAATAGGAAAAAAGGAAAATATGTTTCAAAAGTTCATTCTTTAGATCAATAATATTTAAATAATTCAACTTTATGCCAAACGTAAAAGATGTTCTTACACTTATGTCTCTCACAGTTGTATGTCCCAACAAATGCAACGATATCTTTTTCCTACCTATTAATTGAACAATCCAAATTCCATTGTTGGTTAAACTCAACATTTTGCTAGACCCAAGGATGTCATGAAACTTTTTATTTTTTCTTCTGAAGAAGCAAGGAAAGAGTAAGCTTTGAGGAATTTTGAGGTAGGACGGTTCCAACAGGGTGTGAGCCTCAACTTTCTGAAAATGCATTCATAAAAACACAGATATTATTATACGTGGTGCTTACCTGAAATACAAAAAAATTGACATCCATCAATTACCACATTCTCATGTAATTGTTCTAACAAGTCTTTTAAAATTGGTAACAGTTTGACTTTCTGCCACTCATTGTTTATTGCATTACATGGAAAAACTTTCGTATTTTTTGAGAACTAGCTGAGACATAAATAGTGCCCTAAACCTTATCGATCTCATGGAGGTGCAAGCCTCAGCTATAAGACAAATAAGTCTCTTATGAGTCAAAGAAGAGGTCAACGACTCATAAGTGAAGTTAACATCAAATAATTCAAAAAACGTCAAATAATTTGAGTCTCTCCGTGTGAGGTCTCAAGGTGTAAGCCTCGAAAGCTATTTAAAATATTAGTTAGATTTAAGATAGCTTACACAGTTCTCTCTTTCTCTCTCTCTACACACACACACATACAAGCACACACGCGCACACACACACGCGCACGCACACACACAAATATATGTTATCTGTTTATGTATGGATGTATTTAATTATCAGTGTACGCACTTTTCAGGAGTTCTATCACCAACAGTTATCTCTTGGTAAATCTGATCTTCCTAGAATATTTGGAATGACTGCTTCTCCTATAAAGTCAAAGGGTATTTCAAGCTGA

mRNA sequence

CCATTGGGACCTGTTGCAATTCGGGAAAAGACGAACCGACCATGCCTTTTTGCTTTCCTTGATTGTTTCCTCGAAGGTCCCTTCAATTCTTCCCCTTTAAGAACGCGGGATGGCGTCGAATATGGAAACCGAGAATGAACAGCTAGTGGCTGATCCTTTGTCATTTGCCAGAAGTTACCAGTTGGAAGGATTGGAAAAAGCACTTAAACAGAACACGATAGTGTTTTTAGAAACTGGCTCTGGGAAAACTTTGATTGCCATCATGCTTTTGCGCAGCTTTGCTCATCAACTACGCAAACCTTCACCCTTCGTTGCTGTTTTCTTAGTTCCACAAGTTGTTTTGGTTACTCAACAAGCTGAAGCTTTGAAGATGCATACCGACTTGAGCGTTGGTTTGTATTATGGAGATATGGGGATAGACTTTTGGGATGGTGCAATTTGGAAGCGAGAAATAGAAAAACATGAGGTGCTTGTGATGACTCCTGCAATTTTGCTAAATGGCTTGAGGCATAGCTTCTTTCATATAAGCATGATAAAGGTCTTAGTATTGGATGAATGCCATCATGCCAGAGGCAAACACCCCTATGCTTGTATTATGACGGAGTTCTATCACCAACAGTTATCTCTTGGTAAATCTGATCTTCCTAGAATATTTGGAATGACTGCTTCTCCTATAAAGTCAAAGGGTATTTCAAGCTGA

Coding sequence (CDS)

ATGGCGTCGAATATGGAAACCGAGAATGAACAGCTAGTGGCTGATCCTTTGTCATTTGCCAGAAGTTACCAGTTGGAAGGATTGGAAAAAGCACTTAAACAGAACACGATAGTGTTTTTAGAAACTGGCTCTGGGAAAACTTTGATTGCCATCATGCTTTTGCGCAGCTTTGCTCATCAACTACGCAAACCTTCACCCTTCGTTGCTGTTTTCTTAGTTCCACAAGTTGTTTTGGTTACTCAACAAGCTGAAGCTTTGAAGATGCATACCGACTTGAGCGTTGGTTTGTATTATGGAGATATGGGGATAGACTTTTGGGATGGTGCAATTTGGAAGCGAGAAATAGAAAAACATGAGGTGCTTGTGATGACTCCTGCAATTTTGCTAAATGGCTTGAGGCATAGCTTCTTTCATATAAGCATGATAAAGGTCTTAGTATTGGATGAATGCCATCATGCCAGAGGCAAACACCCCTATGCTTGTATTATGACGGAGTTCTATCACCAACAGTTATCTCTTGGTAAATCTGATCTTCCTAGAATATTTGGAATGACTGCTTCTCCTATAAAGTCAAAGGGTATTTCAAGCTGA
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051607 defense response to virus
biological_process GO:0010216 maintenance of DNA methylation
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003723 RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C010041MELO3C010041gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C010041T2MELO3C010041T2-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C010041T2.cds1MELO3C010041T2.cds1CDS
MELO3C010041T2.cds2MELO3C010041T2.cds2CDS
MELO3C010041T2.cds3MELO3C010041T2.cds3CDS
MELO3C010041T2.cds4MELO3C010041T2.cds4CDS
MELO3C010041T2.cds5MELO3C010041T2.cds5CDS