MELO3C009780T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C009780T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Polyglutamine-binding protein 1
Location	chr4 : 28144757 .. 28145806 (-)
Sequence length	312

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAAGGTGGAAAGCGAGAAAGTAGGAAGCGTTCCTACAGTGAGGATGATGAATTGGATCCAATGGATCCTAGCTCTTATTCAGATGCTCCTCGTGGTGGCTGGTATGTCTTCAAAAATTAGCTTTCTGGGTTGAATACTAGTTGATTATTTTGGCCTCGTTTGACTAAGGTTTTAGTTTTTGGTTTTTGTGCTTGTTTTCTTCCATTTGTTTATAATAGTTTTCATCTTTCGTAAGGAAATATTTAAATTTGTATTCAAATTCCAAAAACAAAAACAAGTTTTTTAATAACTATATAATTTAATTTTCAAGACTTGGCTTGAATTTTGAAATCATCCTTAAATAATAGATAACAAAACAAAGAAATTCACAAGATAGTATCTGCTTTTATAAACTTAATTTTAACTAAAAGTCAAAGGGTTATCAAATGGGTCTCTGAAAATCTGTCCAAGAAGTAGAGTGATATTAATTGTTTGTTTTGATTACTTTTCAGGGTTGTGGGTCTAAAAGGTGTGCAGCCTCGGGCAGCAGATACTACTGCTACAGTAAGTAGTAACTAATCATTTTAGACTTTTAGCTGTTTGCTGTTGCAACCGTTTCACCTTATGATGGGCAATTATCATTTCATGTATAGACATGTTATGTAGTTTCACATATACAATTTAAGACATTTCCTTCACAACGGGCCTTGGTTTTAGTCTGTTTGATGTAATGTGCTGACTCTAGCGTCTGCAGTGAACTCTAGACACGGGCTAAAGCGGGGGTTGTTCTCTTGTTCTTCGATCCAATCCTCATTGTGTTGGATCTCATTTTAAAATATATTTTTTCCCTATTAAATCGAAATACTTCTAATTGGATAATAAATACTTCCTCTCGTGGATGGTGAATGGCAGGGTCCTCTCTTTCAGCAGCGGCCATATCCATCACCTGGAGCTGTTCTGAGGAAGAATGCTGAAATTGCTTCACAGACCAAGAAGGGAAGCTCTCACTATGCACCCATTTCCAAGAGGGGAGATGGAAGTGATGGCCTTGGTGATGCTGACTGA

mRNA sequence

ATGGGAAAAGGTGGAAAGCGAGAAAGTAGGAAGCGTTCCTACAGTGAGGATGATGAATTGGATCCAATGGATCCTAGCTCTTATTCAGATGCTCCTCGTGGTGGCTGGGTTGTGGGTCTAAAAGGTGTGCAGCCTCGGGCAGCAGATACTACTGCTACAGGTCCTCTCTTTCAGCAGCGGCCATATCCATCACCTGGAGCTGTTCTGAGGAAGAATGCTGAAATTGCTTCACAGACCAAGAAGGGAAGCTCTCACTATGCACCCATTTCCAAGAGGGGAGATGGAAGTGATGGCCTTGGTGATGCTGACTGA

Coding sequence (CDS)

ATGGGAAAAGGTGGAAAGCGAGAAAGTAGGAAGCGTTCCTACAGTGAGGATGATGAATTGGATCCAATGGATCCTAGCTCTTATTCAGATGCTCCTCGTGGTGGCTGGGTTGTGGGTCTAAAAGGTGTGCAGCCTCGGGCAGCAGATACTACTGCTACAGGTCCTCTCTTTCAGCAGCGGCCATATCCATCACCTGGAGCTGTTCTGAGGAAGAATGCTGAAATTGCTTCACAGACCAAGAAGGGAAGCTCTCACTATGCACCCATTTCCAAGAGGGGAGATGGAAGTGATGGCCTTGGTGATGCTGACTGA

Protein sequence

MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQRPYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD*

Homology

[Close]

BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_BOVIN (Polyglutamine-binding protein 1 OS=Bos taurus GN=PQBP1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.3e-20
Identity = 51/76 (67.11%), Postives = 57/76 (75.00%), Query Frame = 1


Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +S+K +  +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 187 KSKKAASRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 246

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 247 GAVLRANAE-ASRTKQ 261

[Close]

BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_GORGO (Polyglutamine-binding protein 1 OS=Gorilla gorilla gorilla GN=PQBP1 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-20
Identity = 51/76 (67.11%), Postives = 56/76 (73.68%), Query Frame = 1


Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +S+K    +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 189 KSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 248

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 249 GAVLRANAE-ASRTKQ 263

[Close]

BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_HUMAN (Polyglutamine-binding protein 1 OS=Homo sapiens GN=PQBP1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-20
Identity = 51/76 (67.11%), Postives = 56/76 (73.68%), Query Frame = 1


Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +S+K    +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 189 KSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 248

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 249 GAVLRANAE-ASRTKQ 263

[Close]

BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_MOUSE (Polyglutamine-binding protein 1 OS=Mus musculus GN=Pqbp1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-20
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 1


Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +++K +  +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 187 KNKKATSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 246

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 247 GAVLRANAE-ASRTKQ 261

[Close]

BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_PONPY (Polyglutamine-binding protein 1 OS=Pongo pygmaeus GN=PQBP1 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-20
Identity = 51/76 (67.11%), Postives = 56/76 (73.68%), Query Frame = 1


Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +S+K    +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 189 KSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 248

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 249 GAVLRANAE-ASRTKQ 263

[Close]

BLAST of MELO3C009780T1 vs. TrEMBL
Match: A0A0A0LFL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822240 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.3e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 600 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 659

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 660 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 702

[Close]

BLAST of MELO3C009780T1 vs. TrEMBL
Match: W9SHY3_9ROSA (Polyglutamine-binding protein 1 OS=Morus notabilis GN=L484_027914 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 8.0e-50
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           MGKGGKRESRKR+YSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 586 MGKGGKRESRKRAYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 645

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIAS TKKGSS + PISKRGDGSDGLGDAD
Sbjct: 646 PYPSPGAVLRKNAEIASLTKKGSSQFTPISKRGDGSDGLGDAD 688

[Close]

BLAST of MELO3C009780T1 vs. TrEMBL
Match: M5VRA1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008056mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-49
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           MGKG K+ES+KRSYSED+ELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 245 MGKGNKKESKKRSYSEDEELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 304

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAE+ASQTKK SSH+APISKRGDGSDGLGDAD
Sbjct: 305 PYPSPGAVLRKNAEVASQTKKSSSHFAPISKRGDGSDGLGDAD 347

[Close]

BLAST of MELO3C009780T1 vs. TrEMBL
Match: A0A067JIT5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26715 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-48
Identity = 95/103 (92.23%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKG +RESRKR+++EDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 362 VGKGNRRESRKRAHTEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 421

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKK SSHYAPISK+GDGSDGLGDAD
Sbjct: 422 PYPSPGAVLRKNAEIASQTKKFSSHYAPISKKGDGSDGLGDAD 464

[Close]

BLAST of MELO3C009780T1 vs. TrEMBL
Match: D7TQ37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00570 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKG KR+SRKR+Y+EDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 430 IGKGSKRDSRKRAYTEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 489

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQ+KK  SHYAPISK+GDGSDGLGDAD
Sbjct: 490 PYPSPGAVLRKNAEIASQSKKPGSHYAPISKKGDGSDGLGDAD 532

[Close]

BLAST of MELO3C009780T1 vs. TAIR10
Match: AT2G41020.1 (AT2G41020.1 WW domain-containing protein)

HSP 1 Score: 166.0 bits (419), Expect = 1.2e-41
Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 1


Query: 10  RKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQRPYPSPGAVL 69
           +KR+++EDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTA+GPLFQQRPYPSPGAVL
Sbjct: 369 KKRAHAEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTASGPLFQQRPYPSPGAVL 428

Query: 70  RKNAEIA-SQTKKGSSHYAPISKRGDGSDGLGDAD 104
           R+NAE+A SQ KK +S +  I+KRGDGSDGLGDAD
Sbjct: 429 RRNAEVASSQKKKPNSQFTEITKRGDGSDGLGDAD 463

[Close]

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|449437753|ref|XP_004136655.1| (PREDICTED: uncharacterized protein LOC101203374 isoform X3 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 498 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 557

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 558 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 600

[Close]

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|778685280|ref|XP_011652198.1| (PREDICTED: uncharacterized protein LOC101203374 isoform X1 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 495 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 554

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 555 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 597

[Close]

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|700204339|gb|KGN59472.1| (hypothetical protein Csa_3G822240 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 600 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 659

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 660 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 702

[Close]

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|778685289|ref|XP_011652199.1| (PREDICTED: uncharacterized protein LOC101203374 isoform X2 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 494 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 553

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 554 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 596

[Close]

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|703155665|ref|XP_010111261.1| (Polyglutamine-binding protein 1 [Morus notabilis])

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-49
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           MGKGGKRESRKR+YSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 586 MGKGGKRESRKRAYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 645

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIAS TKKGSS + PISKRGDGSDGLGDAD
Sbjct: 646 PYPSPGAVLRKNAEIASLTKKGSSQFTPISKRGDGSDGLGDAD 688

The following BLAST results are available for this feature:

BLAST of MELO3C009780T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PQBP1_BOVIN	3.3e-20	67.11	Polyglutamine-binding protein 1 OS=Bos taurus GN=PQBP1 PE=2 SV=1	[more]
PQBP1_GORGO	7.3e-20	67.11	Polyglutamine-binding protein 1 OS=Gorilla gorilla gorilla GN=PQBP1 PE=3 SV=1	[more]
PQBP1_HUMAN	7.3e-20	67.11	Polyglutamine-binding protein 1 OS=Homo sapiens GN=PQBP1 PE=1 SV=1	[more]
PQBP1_MOUSE	7.3e-20	65.79	Polyglutamine-binding protein 1 OS=Mus musculus GN=Pqbp1 PE=1 SV=1	[more]
PQBP1_PONPY	7.3e-20	67.11	Polyglutamine-binding protein 1 OS=Pongo pygmaeus GN=PQBP1 PE=3 SV=1	[more]

BLAST of MELO3C009780T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFL2_CUCSA	2.3e-52	99.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822240 PE=4 SV=1	[more]
W9SHY3_9ROSA	8.0e-50	95.15	Polyglutamine-binding protein 1 OS=Morus notabilis GN=L484_027914 PE=4 SV=1	[more]
M5VRA1_PRUPE	1.1e-49	93.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008056mg PE=4 SV=1	[more]
A0A067JIT5_JATCU	1.2e-48	92.23	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26715 PE=4 SV=1	[more]
D7TQ37_VITVI	2.0e-48	91.26	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00570 PE=4 SV=...	[more]

BLAST of MELO3C009780T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41020.1	1.2e-41	83.16	WW domain-containing protein	[more]

BLAST of MELO3C009780T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437753\|ref\|XP_004136655.1\|	3.2e-52	99.03	PREDICTED: uncharacterized protein LOC101203374 isoform X3 [Cucumis sativus]	[more]
gi\|778685280\|ref\|XP_011652198.1\|	3.2e-52	99.03	PREDICTED: uncharacterized protein LOC101203374 isoform X1 [Cucumis sativus]	[more]
gi\|700204339\|gb\|KGN59472.1\|	3.2e-52	99.03	hypothetical protein Csa_3G822240 [Cucumis sativus]	[more]
gi\|778685289\|ref\|XP_011652199.1\|	3.2e-52	99.03	PREDICTED: uncharacterized protein LOC101203374 isoform X2 [Cucumis sativus]	[more]
gi\|703155665\|ref\|XP_010111261.1\|	1.2e-49	95.15	Polyglutamine-binding protein 1 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0016558	protein import into peroxisome matrix
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C009780	MELO3C009780	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C009780T1	MELO3C009780T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009780T1.cds3	MELO3C009780T1.cds3	CDS
MELO3C009780T1.cds2	MELO3C009780T1.cds2	CDS
MELO3C009780T1.cds1	MELO3C009780T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21737	POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3	coord: 1..103 score: 6.2
None	No IPR available	PANTHER	PTHR21737:SF3	POLYGLUTAMINE-BINDING PROTEIN 1	coord: 1..103 score: 6.2