MELO3C009780T1 (mRNA) Melon (DHL92) v3.5.1

NameMELO3C009780T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPolyglutamine-binding protein 1
Locationchr4 : 28144757 .. 28145806 (-)
Sequence length312
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAAGGTGGAAAGCGAGAAAGTAGGAAGCGTTCCTACAGTGAGGATGATGAATTGGATCCAATGGATCCTAGCTCTTATTCAGATGCTCCTCGTGGTGGCTGGTATGTCTTCAAAAATTAGCTTTCTGGGTTGAATACTAGTTGATTATTTTGGCCTCGTTTGACTAAGGTTTTAGTTTTTGGTTTTTGTGCTTGTTTTCTTCCATTTGTTTATAATAGTTTTCATCTTTCGTAAGGAAATATTTAAATTTGTATTCAAATTCCAAAAACAAAAACAAGTTTTTTAATAACTATATAATTTAATTTTCAAGACTTGGCTTGAATTTTGAAATCATCCTTAAATAATAGATAACAAAACAAAGAAATTCACAAGATAGTATCTGCTTTTATAAACTTAATTTTAACTAAAAGTCAAAGGGTTATCAAATGGGTCTCTGAAAATCTGTCCAAGAAGTAGAGTGATATTAATTGTTTGTTTTGATTACTTTTCAGGGTTGTGGGTCTAAAAGGTGTGCAGCCTCGGGCAGCAGATACTACTGCTACAGTAAGTAGTAACTAATCATTTTAGACTTTTAGCTGTTTGCTGTTGCAACCGTTTCACCTTATGATGGGCAATTATCATTTCATGTATAGACATGTTATGTAGTTTCACATATACAATTTAAGACATTTCCTTCACAACGGGCCTTGGTTTTAGTCTGTTTGATGTAATGTGCTGACTCTAGCGTCTGCAGTGAACTCTAGACACGGGCTAAAGCGGGGGTTGTTCTCTTGTTCTTCGATCCAATCCTCATTGTGTTGGATCTCATTTTAAAATATATTTTTTCCCTATTAAATCGAAATACTTCTAATTGGATAATAAATACTTCCTCTCGTGGATGGTGAATGGCAGGGTCCTCTCTTTCAGCAGCGGCCATATCCATCACCTGGAGCTGTTCTGAGGAAGAATGCTGAAATTGCTTCACAGACCAAGAAGGGAAGCTCTCACTATGCACCCATTTCCAAGAGGGGAGATGGAAGTGATGGCCTTGGTGATGCTGACTGA

mRNA sequence

ATGGGAAAAGGTGGAAAGCGAGAAAGTAGGAAGCGTTCCTACAGTGAGGATGATGAATTGGATCCAATGGATCCTAGCTCTTATTCAGATGCTCCTCGTGGTGGCTGGGTTGTGGGTCTAAAAGGTGTGCAGCCTCGGGCAGCAGATACTACTGCTACAGGTCCTCTCTTTCAGCAGCGGCCATATCCATCACCTGGAGCTGTTCTGAGGAAGAATGCTGAAATTGCTTCACAGACCAAGAAGGGAAGCTCTCACTATGCACCCATTTCCAAGAGGGGAGATGGAAGTGATGGCCTTGGTGATGCTGACTGA

Coding sequence (CDS)

ATGGGAAAAGGTGGAAAGCGAGAAAGTAGGAAGCGTTCCTACAGTGAGGATGATGAATTGGATCCAATGGATCCTAGCTCTTATTCAGATGCTCCTCGTGGTGGCTGGGTTGTGGGTCTAAAAGGTGTGCAGCCTCGGGCAGCAGATACTACTGCTACAGGTCCTCTCTTTCAGCAGCGGCCATATCCATCACCTGGAGCTGTTCTGAGGAAGAATGCTGAAATTGCTTCACAGACCAAGAAGGGAAGCTCTCACTATGCACCCATTTCCAAGAGGGGAGATGGAAGTGATGGCCTTGGTGATGCTGACTGA

Protein sequence

MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQRPYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD*
BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_BOVIN (Polyglutamine-binding protein 1 OS=Bos taurus GN=PQBP1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.3e-20
Identity = 51/76 (67.11%), Postives = 57/76 (75.00%), Query Frame = 1

Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +S+K +  +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 187 KSKKAASRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 246

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 247 GAVLRANAE-ASRTKQ 261

BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_GORGO (Polyglutamine-binding protein 1 OS=Gorilla gorilla gorilla GN=PQBP1 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-20
Identity = 51/76 (67.11%), Postives = 56/76 (73.68%), Query Frame = 1

Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +S+K    +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 189 KSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 248

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 249 GAVLRANAE-ASRTKQ 263

BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_HUMAN (Polyglutamine-binding protein 1 OS=Homo sapiens GN=PQBP1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-20
Identity = 51/76 (67.11%), Postives = 56/76 (73.68%), Query Frame = 1

Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +S+K    +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 189 KSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 248

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 249 GAVLRANAE-ASRTKQ 263

BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_MOUSE (Polyglutamine-binding protein 1 OS=Mus musculus GN=Pqbp1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-20
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 1

Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +++K +  +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 187 KNKKATSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 246

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 247 GAVLRANAE-ASRTKQ 261

BLAST of MELO3C009780T1 vs. Swiss-Prot
Match: PQBP1_PONPY (Polyglutamine-binding protein 1 OS=Pongo pygmaeus GN=PQBP1 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-20
Identity = 51/76 (67.11%), Postives = 56/76 (73.68%), Query Frame = 1

Query: 8   ESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSP 67
           +S+K    +D+ELDPMDPSSYSDAPRG W  GL  +      ADTTA GPLFQQRPYPSP
Sbjct: 189 KSKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSP 248

Query: 68  GAVLRKNAEIASQTKK 82
           GAVLR NAE AS+TK+
Sbjct: 249 GAVLRANAE-ASRTKQ 263

BLAST of MELO3C009780T1 vs. TrEMBL
Match: A0A0A0LFL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822240 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.3e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 600 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 659

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 660 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 702

BLAST of MELO3C009780T1 vs. TrEMBL
Match: W9SHY3_9ROSA (Polyglutamine-binding protein 1 OS=Morus notabilis GN=L484_027914 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 8.0e-50
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           MGKGGKRESRKR+YSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 586 MGKGGKRESRKRAYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 645

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIAS TKKGSS + PISKRGDGSDGLGDAD
Sbjct: 646 PYPSPGAVLRKNAEIASLTKKGSSQFTPISKRGDGSDGLGDAD 688

BLAST of MELO3C009780T1 vs. TrEMBL
Match: M5VRA1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008056mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-49
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           MGKG K+ES+KRSYSED+ELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 245 MGKGNKKESKKRSYSEDEELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 304

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAE+ASQTKK SSH+APISKRGDGSDGLGDAD
Sbjct: 305 PYPSPGAVLRKNAEVASQTKKSSSHFAPISKRGDGSDGLGDAD 347

BLAST of MELO3C009780T1 vs. TrEMBL
Match: A0A067JIT5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26715 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-48
Identity = 95/103 (92.23%), Postives = 101/103 (98.06%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKG +RESRKR+++EDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 362 VGKGNRRESRKRAHTEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 421

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKK SSHYAPISK+GDGSDGLGDAD
Sbjct: 422 PYPSPGAVLRKNAEIASQTKKFSSHYAPISKKGDGSDGLGDAD 464

BLAST of MELO3C009780T1 vs. TrEMBL
Match: D7TQ37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00570 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKG KR+SRKR+Y+EDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 430 IGKGSKRDSRKRAYTEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 489

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQ+KK  SHYAPISK+GDGSDGLGDAD
Sbjct: 490 PYPSPGAVLRKNAEIASQSKKPGSHYAPISKKGDGSDGLGDAD 532

BLAST of MELO3C009780T1 vs. TAIR10
Match: AT2G41020.1 (AT2G41020.1 WW domain-containing protein)

HSP 1 Score: 166.0 bits (419), Expect = 1.2e-41
Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 1

Query: 10  RKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQRPYPSPGAVL 69
           +KR+++EDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTA+GPLFQQRPYPSPGAVL
Sbjct: 369 KKRAHAEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTASGPLFQQRPYPSPGAVL 428

Query: 70  RKNAEIA-SQTKKGSSHYAPISKRGDGSDGLGDAD 104
           R+NAE+A SQ KK +S +  I+KRGDGSDGLGDAD
Sbjct: 429 RRNAEVASSQKKKPNSQFTEITKRGDGSDGLGDAD 463

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|449437753|ref|XP_004136655.1| (PREDICTED: uncharacterized protein LOC101203374 isoform X3 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 498 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 557

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 558 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 600

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|778685280|ref|XP_011652198.1| (PREDICTED: uncharacterized protein LOC101203374 isoform X1 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 495 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 554

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 555 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 597

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|700204339|gb|KGN59472.1| (hypothetical protein Csa_3G822240 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 600 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 659

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 660 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 702

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|778685289|ref|XP_011652199.1| (PREDICTED: uncharacterized protein LOC101203374 isoform X2 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           +GKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 494 IGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 553

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD
Sbjct: 554 PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 596

BLAST of MELO3C009780T1 vs. NCBI nr
Match: gi|703155665|ref|XP_010111261.1| (Polyglutamine-binding protein 1 [Morus notabilis])

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-49
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 1

Query: 1   MGKGGKRESRKRSYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 60
           MGKGGKRESRKR+YSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR
Sbjct: 586 MGKGGKRESRKRAYSEDDELDPMDPSSYSDAPRGGWVVGLKGVQPRAADTTATGPLFQQR 645

Query: 61  PYPSPGAVLRKNAEIASQTKKGSSHYAPISKRGDGSDGLGDAD 104
           PYPSPGAVLRKNAEIAS TKKGSS + PISKRGDGSDGLGDAD
Sbjct: 646 PYPSPGAVLRKNAEIASLTKKGSSQFTPISKRGDGSDGLGDAD 688

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PQBP1_BOVIN3.3e-2067.11Polyglutamine-binding protein 1 OS=Bos taurus GN=PQBP1 PE=2 SV=1[more]
PQBP1_GORGO7.3e-2067.11Polyglutamine-binding protein 1 OS=Gorilla gorilla gorilla GN=PQBP1 PE=3 SV=1[more]
PQBP1_HUMAN7.3e-2067.11Polyglutamine-binding protein 1 OS=Homo sapiens GN=PQBP1 PE=1 SV=1[more]
PQBP1_MOUSE7.3e-2065.79Polyglutamine-binding protein 1 OS=Mus musculus GN=Pqbp1 PE=1 SV=1[more]
PQBP1_PONPY7.3e-2067.11Polyglutamine-binding protein 1 OS=Pongo pygmaeus GN=PQBP1 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LFL2_CUCSA2.3e-5299.03Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822240 PE=4 SV=1[more]
W9SHY3_9ROSA8.0e-5095.15Polyglutamine-binding protein 1 OS=Morus notabilis GN=L484_027914 PE=4 SV=1[more]
M5VRA1_PRUPE1.1e-4993.20Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008056mg PE=4 SV=1[more]
A0A067JIT5_JATCU1.2e-4892.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26715 PE=4 SV=1[more]
D7TQ37_VITVI2.0e-4891.26Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00570 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT2G41020.11.2e-4183.16 WW domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|449437753|ref|XP_004136655.1|3.2e-5299.03PREDICTED: uncharacterized protein LOC101203374 isoform X3 [Cucumis sativus][more]
gi|778685280|ref|XP_011652198.1|3.2e-5299.03PREDICTED: uncharacterized protein LOC101203374 isoform X1 [Cucumis sativus][more]
gi|700204339|gb|KGN59472.1|3.2e-5299.03hypothetical protein Csa_3G822240 [Cucumis sativus][more]
gi|778685289|ref|XP_011652199.1|3.2e-5299.03PREDICTED: uncharacterized protein LOC101203374 isoform X2 [Cucumis sativus][more]
gi|703155665|ref|XP_010111261.1|1.2e-4995.15Polyglutamine-binding protein 1 [Morus notabilis][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0000956 nuclear-transcribed mRNA catabolic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0016558 protein import into peroxisome matrix
cellular_component GO:0005622 intracellular
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C009780MELO3C009780gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C009780T1MELO3C009780T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C009780T1.cds3MELO3C009780T1.cds3CDS
MELO3C009780T1.cds2MELO3C009780T1.cds2CDS
MELO3C009780T1.cds1MELO3C009780T1.cds1CDS


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21737POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3coord: 1..103
score: 6.2
NoneNo IPR availablePANTHERPTHR21737:SF3POLYGLUTAMINE-BINDING PROTEIN 1coord: 1..103
score: 6.2