MELO3C009677.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GACAATTTTATCATCTAAGGAATCCAATATTAATTTGTTAAAATCAAGAATATTGTTGGGAAGTATAACTGCATAGATTATAGTTTTCCAAAACACCAAGGGCAATAATTAATTAATTTTACCCAATTTATTCACACATCATGAAAAAAAAAAAATTCTCTTCTTATCTATATATATTTGTGATTTCTAGGTTTTTAAGAAGAGAGCTTGAAGAAAGAGATCATTTTTGTTCAAAAAAAAAAAAACCCTCAAATTTTTCCTTGTTTTTGTATTTTTTGTTCTTTGTGTTTGTTGTAAGTTTGTCATGGAAAATCATGGTGATGACCCTAATAGTCCAAATCACGGCTGTGAGAGAGCGGAGCCGGTGAGATCACGGTGGACTCCCAAGCCGGAGCAGATTCTAATTTTGGAGTCCATTTTCAATAGTGGAATGGTTAATCCTCCTAAAGATGAGACTGTTAGAATAAGAAAGCTTCTTGAAAAATTTGGTTCTGTTGGGGATGCTAATGTTTTTTACTGGTTTCAAAACCGTCGCTCTCGCTCTCGCCGTCGCCAACGTCAGCTACAAGCCGCCGCTACTCACCAAGGTAGCAGCAGTGCAATTCACTACGATTGTGGTAACGTCAGCAGTGGCGGTTACAACGGTGGAAGTGGTGGTATTATGAATTTTGCTGGGGTTTCCTCTTCTTATATCGGAGGAGGGTCCTCTTCTTCATCCTCCTCCGCTTCTGGGGTTGGAGGAGATTGTAGCGGTGGCAGTGGCGGGAGCAGTGGTTTTTCGATGTCGGGTCATATGGGTTTCTCAGAAGTTGATCAACAAATGGTTGTGACAAGTACTCCATCGTTTTGCCCTTCGGAAACCTCAAATTTAGAGTTTCAATCAGGTATAGTTGATGCATGTCTTTCTTCAAAGAAGAAAAACCCTCTTCATTTCGTTTTCACACCACTCCATTCAGAAGCTTAAATTAACAACTTTAAATAAAAAATTATTTTATTTTCACAAGTTGATAGATTATGTAAATTTCTCGAATTTTTTTTTCTTTCTATAAATGTGAGAATCAAAACCAACAAAAACTTCAAAACTTTTTGATGATGTGACAGTTCCTCCTTGAGCTGAAAATTTTGAACACTAACATCAAAAAACAAGGAAACTTTTTTGTTTTTTTAAATCTTGATGAATTATGTTTGTATTTGTTTTTATTTTTAAAAAAAAAAATTACAAACACTTCACGGGAGAAGTAATGAGAATTAAATTGATGTTGGTGCCTCGATTTTCGATCTGAAATTAAATTTGCAAAAACTAAAAATGGAACTTTTGGGTAGTAAAATTAATATGAAGAGAATCAATATTTCTAGTTGGGATTTCCCAGTGCATCTTCTGATGTCTGTTATTGTCTTGTGAATATTTTAAAAAAATGAATGTTAAGAGAAGGGTTTTATTATTTTGTTTTTTGTTGAAGGTTATATTATAATATTCATAAATGGAGTTCCAACAGAAGTACCAAAAGGAGCAGTGGATATGAAAGCAATGTTTGGGGAAGAGACAGTGTTAGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCTCTCCACACTTTACAGCATGGTGAAAGCTATTTTCTGGTAATTTTATTTTTATTTTATTATTATCTTCCCCACATTCTCTCTTCTTCTTCTTCTGAGAAAAAATATATTCCGTTTCATAACAATTTGACATTTTTTGTCTGCTTAAATCCCATGTGGCGTTTTCATAAGGACGCTAGGTAATTTTTAATTACTTGTTTTTGTTTTATGGAATCTGACTATTTAAGAATTCAAATGTTTCTCGAGTTTGCAAAGGCAAAAATAATTTTCGACGCTAGAAAACTAAAACCGAAATTGGGGTGATTTATATTCTTTTTATCAGTGGAACAAAAAGAATCAAATCGGTTTTACAAATGTGGTTTAAGGTTTTTGTTCAATATAATGCATCAGTGTACTTTTGTTGTTGGTTTCTATATATTTTCCTTATTGGATGAGCTGATGGAAAATCAAGCAATTACTAAGAGGGTTTTTGGAATATGGTTTGTGAATTTTGCAGTACAATGTTTTCTTTGTGAATTAAGAGATAATAAGTAAGAATGGATTATATTCATTTAGATTTTGAAGGAATAGGATGTTATTAAGAGAGGGTGGGAAGTAGATGCGTAG GACAATTTTATCATCTAAGGAATCCAATATTAATTTGTTAAAATCAAGAATATTGTTGGGAAGTATAACTGCATAGATTATAGTTTTCCAAAACACCAAGGGCAATAATTAATTAATTTTACCCAATTTATTCACACATCATGAAAAAAAAAAAATTCTCTTCTTATCTATATATATTTGTGATTTCTAGGTTTTTAAGAAGAGAGCTTGAAGAAAGAGATCATTTTTGTTCAAAAAAAAAAAAACCCTCAAATTTTTCCTTGTTTTTGTATTTTTTGTTCTTTGTGTTTGTTGTAAGTTTGTCATGGAAAATCATGGTGATGACCCTAATAGTCCAAATCACGGCTGTGAGAGAGCGGAGCCGGTGAGATCACGGTGGACTCCCAAGCCGGAGCAGATTCTAATTTTGGAGTCCATTTTCAATAGTGGAATGGTTAATCCTCCTAAAGATGAGACTGTTAGAATAAGAAAGCTTCTTGAAAAATTTGGTTCTGTTGGGGATGCTAATGTTTTTTACTGGTTTCAAAACCGTCGCTCTCGCTCTCGCCGTCGCCAACGTCAGCTACAAGCCGCCGCTACTCACCAAGGTAGCAGCAGTGCAATTCACTACGATTGTGGTAACGTCAGCAGTGGCGGTTACAACGGTGGAAGTGGTGGTATTATGAATTTTGCTGGGGTTTCCTCTTCTTATATCGGAGGAGGGTCCTCTTCTTCATCCTCCTCCGCTTCTGGGGTTGGAGGAGATTGTAGCGGTGGCAGTGGCGGGAGCAGTGGTTTTTCGATGTCGGGTCATATGGGTTTCTCAGAAGTTGATCAACAAATGGTTGTGACAAGTACTCCATCGTTTTGCCCTTCGGAAACCTCAAATTTAGAGTTTCAATCAGGTTATATTATAATATTCATAAATGGAGTTCCAACAGAAGTACCAAAAGGAGCAGTGGATATGAAAGCAATGTTTGGGGAAGAGACAGTGTTAGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCTCTCCACACTTTACAGCATGGTGAAAGCTATTTTCTGGATGTTATTAAGAGAGGGTGGGAAGTAGATGCGTAG ATGGAAAATCATGGTGATGACCCTAATAGTCCAAATCACGGCTGTGAGAGAGCGGAGCCGGTGAGATCACGGTGGACTCCCAAGCCGGAGCAGATTCTAATTTTGGAGTCCATTTTCAATAGTGGAATGGTTAATCCTCCTAAAGATGAGACTGTTAGAATAAGAAAGCTTCTTGAAAAATTTGGTTCTGTTGGGGATGCTAATGTTTTTTACTGGTTTCAAAACCGTCGCTCTCGCTCTCGCCGTCGCCAACGTCAGCTACAAGCCGCCGCTACTCACCAAGGTAGCAGCAGTGCAATTCACTACGATTGTGGTAACGTCAGCAGTGGCGGTTACAACGGTGGAAGTGGTGGTATTATGAATTTTGCTGGGGTTTCCTCTTCTTATATCGGAGGAGGGTCCTCTTCTTCATCCTCCTCCGCTTCTGGGGTTGGAGGAGATTGTAGCGGTGGCAGTGGCGGGAGCAGTGGTTTTTCGATGTCGGGTCATATGGGTTTCTCAGAAGTTGATCAACAAATGGTTGTGACAAGTACTCCATCGTTTTGCCCTTCGGAAACCTCAAATTTAGAGTTTCAATCAGGTTATATTATAATATTCATAAATGGAGTTCCAACAGAAGTACCAAAAGGAGCAGTGGATATGAAAGCAATGTTTGGGGAAGAGACAGTGTTAGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCTCTCCACACTTTACAGCATGGTGAAAGCTATTTTCTGGATGTTATTAAGAGAGGGTGGGAAGTAGATGCGTAG MENHGDDPNSPNHGCERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAATHQGSSSAIHYDCGNVSSGGYNGGSGGIMNFAGVSSSYIGGGSSSSSSSASGVGGDCSGGSGGSSGFSMSGHMGFSEVDQQMVVTSTPSFCPSETSNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFGEETVLVHSSGLPVLTNEFGISLHTLQHGESYFLDVIKRGWEVDA
BLAST of MELO3C009677.2.1 vs. NCBI nr
Match: XP_008443132.1 (PREDICTED: WUSCHEL-related homeobox 11 isoform X1 [Cucumis melo]) HSP 1 Score: 401.0 bits (1029), Expect = 3.2e-108 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. NCBI nr
Match: XP_004136750.1 (PREDICTED: WUSCHEL-related homeobox 11 isoform X1 [Cucumis sativus] >KGN59353.1 hypothetical protein Csa_3G812740 [Cucumis sativus]) HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105 Identity = 246/252 (97.62%), Postives = 247/252 (98.02%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. NCBI nr
Match: XP_008443133.1 (PREDICTED: WUSCHEL-related homeobox 11 isoform X2 [Cucumis melo]) HSP 1 Score: 367.5 bits (942), Expect = 3.9e-98 Identity = 240/252 (95.24%), Postives = 240/252 (95.24%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. NCBI nr
Match: XP_011652132.1 (PREDICTED: WUSCHEL-related homeobox 11 isoform X2 [Cucumis sativus]) HSP 1 Score: 359.0 bits (920), Expect = 1.4e-95 Identity = 234/252 (92.86%), Postives = 235/252 (93.25%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. NCBI nr
Match: XP_022946378.1 (WUSCHEL-related homeobox 11-like [Cucurbita moschata]) HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82 Identity = 198/252 (78.57%), Postives = 207/252 (82.14%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TAIR10
Match: AT3G03660.2 (WUSCHEL related homeobox 11) HSP 1 Score: 179.9 bits (455), Expect = 2.1e-45 Identity = 162/280 (57.86%), Postives = 187/280 (66.79%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TAIR10
Match: AT5G17810.1 (WUSCHEL related homeobox 12) HSP 1 Score: 177.6 bits (449), Expect = 1.0e-44 Identity = 117/251 (46.61%), Postives = 141/251 (56.18%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TAIR10
Match: AT5G45980.1 (WUSCHEL related homeobox 8) HSP 1 Score: 102.8 bits (255), Expect = 3.2e-22 Identity = 81/290 (27.93%), Postives = 113/290 (38.97%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TAIR10
Match: AT2G33880.1 (homeobox-3) HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20 Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TAIR10
Match: AT3G18010.1 (WUSCHEL related homeobox 1) HSP 1 Score: 58.9 bits (141), Expect = 5.4e-09 Identity = 23/55 (41.82%), Postives = 32/55 (58.18%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. Swiss-Prot
Match: sp|Q6X7J3|WOX11_ARATH (WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana OX=3702 GN=WOX11 PE=2 SV=2) HSP 1 Score: 193.7 bits (491), Expect = 2.5e-48 Identity = 142/254 (55.91%), Postives = 164/254 (64.57%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. Swiss-Prot
Match: sp|Q8GY25|WOX12_ARATH (WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana OX=3702 GN=WOX12 PE=2 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.9e-43 Identity = 117/251 (46.61%), Postives = 141/251 (56.18%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. Swiss-Prot
Match: sp|B8B644|WOX11_ORYSI (WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. indica OX=39946 GN=WOX11 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.9e-35 Identity = 149/257 (57.98%), Postives = 168/257 (65.37%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. Swiss-Prot
Match: sp|Q0D3I7|WOX11_ORYSJ (WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX11 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.9e-35 Identity = 149/257 (57.98%), Postives = 168/257 (65.37%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. Swiss-Prot
Match: sp|Q10M29|WOX6_ORYSJ (WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX6 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31 Identity = 124/287 (43.21%), Postives = 151/287 (52.61%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TrEMBL
Match: tr|A0A1S3B7B1|A0A1S3B7B1_CUCME (WUSCHEL-related homeobox 11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486815 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 2.1e-108 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TrEMBL
Match: tr|A0A0A0LC01|A0A0A0LC01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G812740 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 7.4e-106 Identity = 246/252 (97.62%), Postives = 247/252 (98.02%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TrEMBL
Match: tr|A0A1S3B7D7|A0A1S3B7D7_CUCME (WUSCHEL-related homeobox 11 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486815 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 2.6e-98 Identity = 240/252 (95.24%), Postives = 240/252 (95.24%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TrEMBL
Match: tr|A0A061F179|A0A061F179_THECC (WUSCHEL related homeobox 11 OS=Theobroma cacao OX=3641 GN=TCM_025805 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 6.6e-62 Identity = 153/255 (60.00%), Postives = 167/255 (65.49%), Query Frame = 0
BLAST of MELO3C009677.2.1 vs. TrEMBL
Match: tr|A0A1Q3D125|A0A1Q3D125_CEPFO (Homeobox domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_29639 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 4.7e-60 Identity = 154/260 (59.23%), Postives = 179/260 (68.85%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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