MELO3C009612T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGAAGCATCTGACGATGTTATAGAACATGAGCTTCAAGATTTGTCCAGAGCCCCACGAGTTCAAAAGTTTCGATTCAAAGAACTAAAGAAAGCAACGCATGGTCTCTCAACCCGAAGAACAGTTTGGCGAAGGGCGGATTTGGAACTGATTACAGAGGAAATTTGAAAAACAGAGAGGTCGCCGTGAAGAGAATCTCAGAGAATTCTCGTCAAGGGAAACAAGAATTCATTACAGAAGTTGCAATAATTGGTGGTAATATCACAAAAATCTCGTAAAACTAATAGGATGGTGTTACAATAAAAGGGATATTTTTTACTCGTTTATGAGTTCATGCCCAACGGCAGCTTGGATAAATCGATCTTCAATAGCGGCGGCGACGGTAGGAATCCCAATTGGGAAATTAGGTTGAATATAGTCTCCGGAGTGGCTGAAGCTTTGAATTATCTCCACAATAGGTGTGAAGAAACTACGCAGAGACGTGAAATCTTCAAACATAATGTTGGATTCAAAGTTCGAATCGAAATTGGGAGATTTCGAGTTGGCTCGGACGATTCGTCGAACAGAGCAGACACATGGTTGGACGAGAGAGATAGCAGGGACACGAGGGTTCATGGGGCCGGAGATTTTTCTGACGAGCAGAGCCACGTTTGAGACTGATGTGTACGCGTTCGGAGTTACGGTTGTAGAAGTTGCTTGAGGGAGAAAGGCGGCGGTCGGTAGGAAGTCGGAAGGAATTACGACGGAATATTACGCAATGGGTGTGGGAGTTCCAAGAGAGTATACATACTAGATAATATGCTATGCCATGTGAACATGGCCTACAAATCAACCTAAACCTAAGTAAATCTATAATGTTAACAAAAATGAATACCATGAAATGGTCAAGAGAGGTAT GGAAGAAGCATCTGACGATGTTATAGAACATGAGCTTCAAGATTTGTCCAGAGCCCCACGAGTTCAAAAGTTTCGATTCAAAGAACTAAAGAAAGCAACGCATGGTCTCTCAACCCGAAGAACAGTTTGGCGAAGGGCGGATTTGGAACTGATTACAGAGGAAATTTGAAAAACAGAGAGGTCGCCGTGAAGAGAATCTCAGAGAATTCTCGTCAAGGGAAACAAGAATTCATTACAGAAGTTGCAATAATTGGTGGTAATATCACAAAAATCTCGTAAAACTAATAGGATGGTGTTACAATAAAAGGGATATTTTTTACTCGTTTATGAGTTCATGCCCAACGGCAGCTTGGATAAATCGATCTTCAATAGCGGCGGCGACGGTAGGAATCCCAATTGGGAAATTAGGTTGAATATAGTCTCCGGAGTGGCTGAAGCTTTGAATTATCTCCACAATAGGTGTGAAGAAACTACGCAGAGACGTGAAATCTTCAAACATAATGTTGGATTCAAAGTTCGAATCGAAATTGGGAGATTTCGAGTTGGCTCGGACGATTCGTCGAACAGAGCAGACACATGGTTGGACGAGAGAGATAGCAGGGACACGAGGGTTCATGGGGCCGGAGATTTTTCTGACGAGCAGAGCCACGTTTGAGACTGATGTGTACGCGTTCGGAGTTACGGTTGTAGAAGTTGCTTGAGGGAGAAAGGCGGCGGTCGGTAGGAAGTCGGAAGGAATTACGACGGAATATTACGCAATGGGTGTGGGAGTTCCAAGAGAGTATACATACTAGATAATATGCTATGCCATGTGAACATGGCCTACAAATCAACCTAAACCTAAGTAAATCTATAATGTTAACAAAAATGAATACCATGAAATGGTCAAGAGAGGTAT ATGCCCAACGGCAGCTTGGATAAATCGATCTTCAATAGCGGCGGCGACGGTAGGAATCCCAATTGGGAAATTAGGTTGAATATAGTCTCCGGAGTGGCTGAAGCTTTGAATTATCTCCACAATAGGTGTGAAGAAACTACGCAGAGACGTGAAATCTTCAAACATAATGTTGGATTCAAAGTTCGAATCGAAATTGGGAGATTTCGAGTTGGCTCGGACGATTCGTCGAACAGAGCAGACACATGGTTGGACGAGAGAGATAGCAGGGACACGAGGGTTCATGGGGCCGGAGATTTTTCTGACGAGCAGAGCCACGTTTGA MPNGSLDKSIFNSGGDGRNPNWEIRLNIVSGVAEALNYLHNRCEETTQRREIFKHNVGFKVRIEIGRFRVGSDDSSNRADTWLDERDSRDTRVHGAGDFSDEQSHV*
BLAST of MELO3C009612T1 vs. Swiss-Prot
Match: LRKS5_ARATH (Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana GN=LECRKS5 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.3e-08 Identity = 28/57 (49.12%), Postives = 34/57 (59.65%), Query Frame = 1
BLAST of MELO3C009612T1 vs. Swiss-Prot
Match: LRKS7_ARATH (Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana GN=LECRKS7 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 9.5e-07 Identity = 32/82 (39.02%), Postives = 42/82 (51.22%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TrEMBL
Match: A0A0A0LBT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G806250 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.8e-11 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TrEMBL
Match: A0A0A0LEE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G806260 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.4e-09 Identity = 37/67 (55.22%), Postives = 41/67 (61.19%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TrEMBL
Match: M1BLW8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018677 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.7e-08 Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TrEMBL
Match: M1BLW7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018677 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.7e-08 Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TrEMBL
Match: A0A0V0HRP1_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.3e-07 Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TAIR10
Match: AT5G06740.1 (AT5G06740.1 Concanavalin A-like lectin protein kinase family protein) HSP 1 Score: 59.7 bits (143), Expect = 1.3e-09 Identity = 28/57 (49.12%), Postives = 34/57 (59.65%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TAIR10
Match: AT5G55830.1 (AT5G55830.1 Concanavalin A-like lectin protein kinase family protein) HSP 1 Score: 54.3 bits (129), Expect = 5.4e-08 Identity = 32/82 (39.02%), Postives = 42/82 (51.22%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TAIR10
Match: AT5G59270.1 (AT5G59270.1 Concanavalin A-like lectin protein kinase family protein) HSP 1 Score: 48.9 bits (115), Expect = 2.3e-06 Identity = 25/57 (43.86%), Postives = 31/57 (54.39%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TAIR10
Match: AT4G02420.1 (AT4G02420.1 Concanavalin A-like lectin protein kinase family protein) HSP 1 Score: 48.1 bits (113), Expect = 3.8e-06 Identity = 32/91 (35.16%), Postives = 44/91 (48.35%), Query Frame = 1
BLAST of MELO3C009612T1 vs. TAIR10
Match: AT3G53380.1 (AT3G53380.1 Concanavalin A-like lectin protein kinase family protein) HSP 1 Score: 47.8 bits (112), Expect = 5.0e-06 Identity = 25/57 (43.86%), Postives = 30/57 (52.63%), Query Frame = 1
BLAST of MELO3C009612T1 vs. NCBI nr
Match: gi|778684746|ref|XP_004136732.2| (PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 8.3e-11 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 1
BLAST of MELO3C009612T1 vs. NCBI nr
Match: gi|700204160|gb|KGN59293.1| (hypothetical protein Csa_3G806250 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 8.3e-11 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 1
BLAST of MELO3C009612T1 vs. NCBI nr
Match: gi|659084734|ref|XP_008443045.1| (PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Cucumis melo]) HSP 1 Score: 73.9 bits (180), Expect = 1.9e-10 Identity = 50/119 (42.02%), Postives = 60/119 (50.42%), Query Frame = 1
BLAST of MELO3C009612T1 vs. NCBI nr
Match: gi|659084730|ref|XP_008443043.1| (PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Cucumis melo]) HSP 1 Score: 71.6 bits (174), Expect = 9.2e-10 Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 1
BLAST of MELO3C009612T1 vs. NCBI nr
Match: gi|449437910|ref|XP_004136733.1| (PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Cucumis sativus]) HSP 1 Score: 69.7 bits (169), Expect = 3.5e-09 Identity = 37/67 (55.22%), Postives = 41/67 (61.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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