MELO3C008791T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CTGACCTGAAGAACCCCAAGGATCGGGAAAAAAAAAAATGGCCTTCCCTTTTCACCACCACCACCACCACCACCGCCATGACGACGATGAAGACGCCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCATACTCCGATCCACCGCCCCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCGAGGCTCCTCCGCCGCCTCCACCGTCTTACGTTGGCTACGAGTCCAATTTCCCTCCGGAGCCGCCCGTTCCCGACTACGGATACTCCTCCGGACCCCCTCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCACTCCGATTCTCCCTTCTCCAACAGACCAACGGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCCATCCGCGACGGCAAGGTCGTCCTCGTTCCTTCCGATCCAGACGATCCCGCTCAAGTATGATCGATCCGTTCCTCGATCGCTTTCAGTTTTCGCCTTAATTTGTAATTAGAGTATTTGATTTTTTAATTTCTTCCTTATAATTTGATAATTTAATGGTGTTGGTGAATCGTGAACGTTTCAGCACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTGAATAAGGCCACCGGTCAGGCGATGAAACATTCCGTTGGAGCTTCTCATCCGGTATGATTTTCCCCTGATTTTATTGCCATTTTTTAAAGTTCATCTGGAAATTGGAATTTCATTCGTGATAGAATGAATATAAGAATTTACAGATCTCAGAAAATGATTTTGATGAATTGAAAATGGCTTTTAGAATTTGACCAATAACCAATTTTATCCTTATTGGTTTGTGATGTTCGAGAATTAAAAATGTAACATACTACTTTCGATTTTTTTATTTTATTTTTTTTTTGAAATTCTCATACGAATAAAACATAAATTTTAAATTTGTATGACAAATCAATTACACTATCAATTTATAAAAAGAAAAATTAAGAAAAAGAATATCATAAGTGTTTCAGACACGCTTTTCTAAAGATGCACAGCGATTCTAAAACCGGATCGGATTCTGCTGCTCCCCTCACGTTTATTTATTTATTAATTATTTTAGGGTTCAATTTTTTTTTTTTTTCTGTTCTGAGAAAACAATTAGTATTCTATCAACGTTCTTGATTAAAATAACTTTAGTAGGTAGAATGGAAGTTCATTAATATATATATGATCTTTTAAAAGTGTAGGTGGGTCATGTATGAGTTTGTCCGTTGTAACTATTTCTTCTTTTTAAAAAGTTTTGATTAAAATGAAACATTTTTCATTTTTATTATAATTTCTTGTTACTATTTGTGGGCTTCTGTGGGGATTTTTAGGACTTCTTTTACTGTACCTAAATAGTGAAAAAGAAAAGGATATTTTCTTATATGAGCTTCTTTGGTCTGTATTAATTTATTTTAAAATTTGTAACTCTAATCCTTACCATGTATAATCTCATCATATCAATGCCAATTTTTATAATCTGATAAGTTACCATATTTTGTACAACTGAGAGTAAAGCAAGACATGCTAAAGTTTTATAGACCAAATTGTTGCTAAGTTGAAAGTATAGAGATAGAATTGTTTGGTTCAACACCAGAATACTTATTTTCAAAGACAGTTTTCCATAAAAGTTACTTATATTCTTTATTTGAGTTGGAATGCCAGTTTTATAATCAATTTTTTGATTTTGTGTTGGTTGGTTTATGATGTTCAAGTTGCCTGGATCTGGGCATTCTCTTTCATCAAGTTCTGGGATAGCATCTTGGTACATGGTTTCTTAAATTCTGGTTCTAGAAAGGTCACAATGGGGAGTAATAGAACCTGAAGATGCAATCAAGCCAAGTTTTGTTTTGGTTGATTATGACTGGTGTCCTTTTTGGTTGCATACTCTTTGTAATTTATCATTTTTGGTCAAACATGTCCAATCGAAACTGAACTGTGGAACTTTGTTAGATGTTGGTTTTGCATCTTGGAGGACATTGAATATTGGCATTGAGAAGATGATATATCAATTTCAAACTGACCGAGTTTAAAACTAAAACCGACTAAGGAGTGATATCAAATGCAGGTTCAGTTGACACGCTACGATCCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAAATATTCTGGTGGAATTCATGACGGCACGCACATTGTTTTGTGGAAATGGAAGGAAGGAGAAAACCAACTGTGGAAGATCGTACCCTACTGTAAGTTCTTTCTCTTTTATACTATGGTTAGACATCATTCTCTTTTGTTCATCTTGCTGTTACTTTGACTCTTGATTTCTGGATCTCATGCCAAATCAATGGATTCTATTGTTCAGTTTTAGATTTTTCAATTCTAAATTTTTATTTCCCTCTTCCTAATCCTTTAATACCCTGTTAAACATGGATTTCATGTTGAAAAATGATAGACCAAAGGATTAGGGCAAGAGGTGAATTTTTTAATTTAGAGAGTTGCTGAAATAAATGAGCTATTTAGTCATAAGTTCAACGCGTAAGGTGTAAGGAGTTGCTTAATTTTATGGAAGCGATGGTTTTAGTCGTGGGATTCATAAATTCCTTGGGCAGAGTAAGGTTTTGTTGTTGACCTATTTTTCTTTTCAAACAATTTTCAAAACGATTGCATTGAGAAAAGAAAAGACGAAAGATCATACGAACATATAAAAAACCTCCACAAAAGGAGGAGTTCACTTTACAAGGAGGGGCTTCAACTATGCAACAAATGTTTATAGGGAATTATTAAATCCATCGAAATTGAAGTCTAAAGAGAAACATGAAAACAAACAAGGGACCAAACATCAAAAAGGTCTCTATCCACGCCCCTAAACACTCTTATTTCACACCTACCCAATACTCCATAGAAAACAGCATTTCCTCCCAAAATGTAGAATTGAGGAGAAACACTTTGATAATAACATTGGCGTCTTTGTGTCGAGTGATCATCAAACCAAACTTTAGAAAGAAATAATCTCAAACACAATACAAACTCACCACGCCAGAAAATATGGTCAAGTTTTTATAATTTTTTTTTAGATCTTTATCCCGATATGAATATGGTTCAATTTAACAAATGCTCTTAGTCAATTAAGAAGTGGGCGGTTCAAATCTTCCAAATTGAGATTAGATATTAAAATTTTGAAACTCAGTAAAAATTAACTTCTTCTTCTTCTTTAATTGGGTACAACAGGAGGATGTGATGAAATGAAGGGGATGCTATGGTATGCAATGGAGTGTTGTAATAATGTCATGTTGAGAATAAAGGTATTCTCGTGGATTTGAGAAAAACCATATTTGTAGTTCATGAAAAATTGAAAGTGTGTGGAGGCATCAATCAATATGTTTTGTTTGCTTTTTAGATTTAGCTTTAGCAATTAGCATCATTTGATTTGGATGGCTTTTACTTTCCACTCACAATATCCGCAGCTATTTTTATGGATCCCTTCATTTCAACCAAACTTTCTGTAAAAATATGTATCTTCTTCTGTTCCATTTGATGGTAATGATAGTAATTATATTATGTCCGTCTCCTATCTATCTACTTTGATCTTCTTTAGATTTTATTTTATTGCCAAACCATTTG CTGACCTGAAGAACCCCAAGGATCGGGAAAAAAAAAAATGGCCTTCCCTTTTCACCACCACCACCACCACCACCGCCATGACGACGATGAAGACGCCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCATACTCCGATCCACCGCCCCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCGAGGCTCCTCCGCCGCCTCCACCGTCTTACGTTGGCTACGAGTCCAATTTCCCTCCGGAGCCGCCCGTTCCCGACTACGGATACTCCTCCGGACCCCCTCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCACTCCGATTCTCCCTTCTCCAACAGACCAACGGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCCATCCGCGACGGCAAGGTCGTCCTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTGAATAAGGCCACCGGTCAGGCGATGAAACATTCCGTTGGAGCTTCTCATCCGGTTCAGTTGACACGCTACGATCCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAAATATTCTGGTGGAATTCATGACGGCACGCACATTGTTTTGTGGAAATGGAAGGAAGGAGAAAACCAACTGTGGAAGATCGTACCCTACTGAGGATGTGATGAAATGAAGGGGATGCTATGGTATGCAATGGAGTGTTGTAATAATGTCATGTTGAGAATAAAGGTATTCTCGTGGATTTGAGAAAAACCATATTTGTAGTTCATGAAAAATTGAAAGTGTGTGGAGGCATCAATCAATATGTTTTGTTTGCTTTTTAGATTTAGCTTTAGCAATTAGCATCATTTGATTTGGATGGCTTTTACTTTCCACTCACAATATCCGCAGCTATTTTTATGGATCCCTTCATTTCAACCAAACTTTCTGTAAAAATATGTATCTTCTTCTGTTCCATTTGATGGTAATGATAGTAATTATATTATGTCCGTCTCCTATCTATCTACTTTGATCTTCTTTAGATTTTATTTTATTGCCAAACCATTTG ATGGCCTTCCCTTTTCACCACCACCACCACCACCACCGCCATGACGACGATGAAGACGCCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCATACTCCGATCCACCGCCCCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCGAGGCTCCTCCGCCGCCTCCACCGTCTTACGTTGGCTACGAGTCCAATTTCCCTCCGGAGCCGCCCGTTCCCGACTACGGATACTCCTCCGGACCCCCTCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCACTCCGATTCTCCCTTCTCCAACAGACCAACGGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCCATCCGCGACGGCAAGGTCGTCCTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTGAATAAGGCCACCGGTCAGGCGATGAAACATTCCGTTGGAGCTTCTCATCCGGTTCAGTTGACACGCTACGATCCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAAATATTCTGGTGGAATTCATGACGGCACGCACATTGTTTTGTGGAAATGGAAGGAAGGAGAAAACCAACTGTGGAAGATCGTACCCTACTGA MAFPFHHHHHHHRHDDDEDAEPPYPPPGHRPPYSDPPPPLVPHIHHHTHYGEAPPPPPPSYVGYESNFPPEPPVPDYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHHSDSPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSVGASHPVQLTRYDPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPY*
BLAST of MELO3C008791T1 vs. Swiss-Prot
Match: FH20_ARATH (Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=3) HSP 1 Score: 70.1 bits (170), Expect = 4.2e-11 Identity = 41/95 (43.16%), Postives = 41/95 (43.16%), Query Frame = 1
HSP 2 Score: 61.6 bits (148), Expect = 1.5e-08 Identity = 41/102 (40.20%), Postives = 41/102 (40.20%), Query Frame = 1
BLAST of MELO3C008791T1 vs. Swiss-Prot
Match: LRX3_ARATH (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.3e-08 Identity = 34/77 (44.16%), Postives = 34/77 (44.16%), Query Frame = 1
HSP 2 Score: 51.2 bits (121), Expect = 2.0e-05 Identity = 28/62 (45.16%), Postives = 27/62 (43.55%), Query Frame = 1
HSP 3 Score: 43.5 bits (101), Expect = 4.2e-03 Identity = 27/66 (40.91%), Postives = 26/66 (39.39%), Query Frame = 1
BLAST of MELO3C008791T1 vs. Swiss-Prot
Match: PAF1_ARATH (Protein PAF1 homolog OS=Arabidopsis thaliana GN=VIP2 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07 Identity = 38/104 (36.54%), Postives = 41/104 (39.42%), Query Frame = 1
HSP 2 Score: 48.5 bits (114), Expect = 1.3e-04 Identity = 39/128 (30.47%), Postives = 41/128 (32.03%), Query Frame = 1
BLAST of MELO3C008791T1 vs. Swiss-Prot
Match: ALG13_HUMAN (Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 OS=Homo sapiens GN=ALG13 PE=1 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 5.3e-06 Identity = 28/62 (45.16%), Postives = 27/62 (43.55%), Query Frame = 1
BLAST of MELO3C008791T1 vs. Swiss-Prot
Match: PAN1_BOTFB (Actin cytoskeleton-regulatory complex protein pan1 OS=Botryotinia fuckeliana (strain B05.10) GN=pan1 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.9e-06 Identity = 28/71 (39.44%), Postives = 32/71 (45.07%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TrEMBL
Match: A0A103YG08_CYNCS (Ricin B lectin domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_013209 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.1e-82 Identity = 154/273 (56.41%), Postives = 189/273 (69.23%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TrEMBL
Match: A0A078FND0_BRANA (BnaC03g21860D protein OS=Brassica napus GN=BnaC03g21860D PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.7e-80 Identity = 159/311 (51.13%), Postives = 189/311 (60.77%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TrEMBL
Match: A0A078F3M1_BRANA (BnaA03g18340D protein OS=Brassica napus GN=BnaA03g18340D PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 8.6e-80 Identity = 161/313 (51.44%), Postives = 193/313 (61.66%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TrEMBL
Match: A0A0D3B5T5_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 8.6e-80 Identity = 158/311 (50.80%), Postives = 193/311 (62.06%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TrEMBL
Match: M4C7D7_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.9e-79 Identity = 159/313 (50.80%), Postives = 192/313 (61.34%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TAIR10
Match: AT2G39050.1 (AT2G39050.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 281.2 bits (718), Expect = 6.7e-76 Identity = 139/255 (54.51%), Postives = 171/255 (67.06%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TAIR10
Match: AT5G07740.1 (AT5G07740.1 actin binding) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12 Identity = 41/95 (43.16%), Postives = 41/95 (43.16%), Query Frame = 1
HSP 2 Score: 61.6 bits (148), Expect = 8.4e-10 Identity = 41/102 (40.20%), Postives = 41/102 (40.20%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TAIR10
Match: AT4G13340.1 (AT4G13340.1 Leucine-rich repeat (LRR) family protein) HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09 Identity = 34/77 (44.16%), Postives = 34/77 (44.16%), Query Frame = 1
HSP 2 Score: 51.2 bits (121), Expect = 1.1e-06 Identity = 28/62 (45.16%), Postives = 27/62 (43.55%), Query Frame = 1
HSP 3 Score: 43.5 bits (101), Expect = 2.4e-04 Identity = 27/66 (40.91%), Postives = 26/66 (39.39%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TAIR10
Match: AT5G62760.1 (AT5G62760.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08 Identity = 32/98 (32.65%), Postives = 40/98 (40.82%), Query Frame = 1
BLAST of MELO3C008791T1 vs. TAIR10
Match: AT1G79730.1 (AT1G79730.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08 Identity = 38/104 (36.54%), Postives = 41/104 (39.42%), Query Frame = 1
HSP 2 Score: 48.5 bits (114), Expect = 7.3e-06 Identity = 39/128 (30.47%), Postives = 41/128 (32.03%), Query Frame = 1
BLAST of MELO3C008791T1 vs. NCBI nr
Match: gi|659082667|ref|XP_008441967.1| (PREDICTED: formin-like protein 20 [Cucumis melo]) HSP 1 Score: 600.5 bits (1547), Expect = 1.4e-168 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1
BLAST of MELO3C008791T1 vs. NCBI nr
Match: gi|449459584|ref|XP_004147526.1| (PREDICTED: extensin [Cucumis sativus]) HSP 1 Score: 561.6 bits (1446), Expect = 7.3e-157 Identity = 250/266 (93.98%), Postives = 257/266 (96.62%), Query Frame = 1
BLAST of MELO3C008791T1 vs. NCBI nr
Match: gi|747073513|ref|XP_011083719.1| (PREDICTED: formin-1 isoform X2 [Sesamum indicum]) HSP 1 Score: 340.1 bits (871), Expect = 3.5e-90 Identity = 164/299 (54.85%), Postives = 197/299 (65.89%), Query Frame = 1
BLAST of MELO3C008791T1 vs. NCBI nr
Match: gi|747073511|ref|XP_011083718.1| (PREDICTED: formin-1 isoform X1 [Sesamum indicum]) HSP 1 Score: 340.1 bits (871), Expect = 3.5e-90 Identity = 164/299 (54.85%), Postives = 197/299 (65.89%), Query Frame = 1
BLAST of MELO3C008791T1 vs. NCBI nr
Match: gi|661876557|emb|CDP19409.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 327.8 bits (839), Expect = 1.8e-86 Identity = 157/277 (56.68%), Postives = 194/277 (70.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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