MELO3C007951T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007951T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	UPF0548 protein
Location	chr8 : 6445947 .. 6448543 (+)
Sequence length	908

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGATGGCGTAAAAATTCTCAACTTTGAACTACAAGTCGTCTGGACTGAACCTACTGAGAACTACACGTCGACTCATAGCTCTCTTCTTCGCTAACTAAAATTTCTGCTGCTCTCTTCTAAGCTTTCGATTCAAAAAAACTCCGATAGCTAAAGTAATTGCTGTTGGGTATGTTTCTTCTTCAACTCCACCTCTCTTCTTACCAACGTCTTCTTCAATCTCTCAACTTTTTATTTGCTTCTGCTTCTATTTCGTCGGAAGAATCAATCGACGCACCTCAAAATTATTATGATTTTTGTAGTATTTTATTCGTCTATTAGGTTCTAATTTTTTAGCAGTTTGTCCCAAATTTCATCTACCACAAAGTCTCAGTGCACTTCAGATTTCGTTCTTGAGGGTTCCTATTTCTTTTTGTTGTTATGGGAACTCTTTAGTTTAGTCTGAAGGCAACTACTAAAACCCTAGATCGTTTGTTTGTTTGTTTGTTTTAATTAGTTTTATTTGAAGGGTGTTGCTGTTGTTTTTGATAAAGATGGTGTTCTTGTGTTGGTCTCGCCCGTCTCCTCAAGAGCAGAAGGCCTGCATTGAAAGGCAAGAACAATGGGATTGAAAAACCCCACCCCTCACAAGAAAAAGTTTCACACAGGAGATGAGATTTTTGTATGGATGACTTATTCTCATTTTCCTGCATGATTAATCATCAGTAACTACGAGCTTATGAAATCTAACCTTCTGCTTACGTCTAAGTGCAGTGTTGCATTCGGGATGCAACATATCTATTATAACTATCACGATCCTAATTTTTTCTCCACTCAAGTGCAATATTCACGGTGAAAGCAAACAAAGTGTGAGAAAAATAAGGATCTTAGGGCTGCTATAGATAATGCACTTTAATGTAAGTAGAAGAAGGTTAAATTTTATATGTTTATAAGAGGAGAGGCATTAATCATGTAGGGAATTGAGAATATGTCTCCGGAATGAAAAACTCCATACGTATATGTTTGTTTGTTTGTTATTTTTTGTCTGAGTGGAGTATTACATGATGTTGATCAATAGGGCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAAGGGAAGAAAGCTCTTCAGAACTGGAGGTTGGATAATGGCTAATATGCTTATTGGATAAGAGTAATCTATTATTAGATGAATCCTTTAATCCACCTCAAATTTTTTGTAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCAACTCCAGTTCATCCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGTTGCCTCTTCAAATTGTGTATGTAAATGAGAATAGAAATACCAATAAGGGTAGGACATGCTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGTTAGTCGTTCCTTTTCTTCCTCTTTCTTCCTCTTTCTTCCTCATTTGCTTGTTAGCTTACTTACAGATTTACTTATCTTGCAAATAATCAGCCATAGTTGTGCAATTAGAGTTGGGATTTCATGCAATTATTGCTCAATGGTGTGATTTTGAAGTGTTTAGTCAATGTCTTTCCTTGACGACTGGGATGTATAGTCAATTGAAAGTTTCTCCCTTAAAAGCTACATATTTTATTACATATTTTATTATTGCTCAATGCAATTATTACAGATCGGATCTCATATAGTCGTCAATTTCCTTTCTTAGAGGAAGTTTCTCCCTTAAAAGCTACATGACAGGAGCCCGGTGAAAGGTCGTATTTTTAAAATCTTGGCCACGGACACAGGAAGAACACAATGAACATACTTAGATTGTGTACCATTAATATATAACATATCTATTGTATAAACAAGTGTTCGATATGTATCCAACAAGGATTGGACATGCAAACTAGCCAAATTAGAGTGTCCGTGCTTCCTAGGTTTTTCTTACAGGTCTGGTACCAACTTACAATATTTAGTCCATGCACACTAAAGTATGAAGTCTTTAACCAGGTTTCTCTTTTCGTACACATATAGGAAGTAGAGACTTCTATTAAGAACAAGATCGCAATCTGTCCCAAAATTCCTAAATACTTCACTCAGACTATCTGCATCTTCTAGACAACACAATCCACCATTCATTTCTTCCAAGCGAAAAACTTTTTAATCTCACTCTAGATCCTCTAAATGTACTAACATGTTCTTAACTTTCATAATTTTAGGCTGGTGAAGAACGGTTTTCAATTGAGATGGACTCAAACAGTCAAGTGTGGTATGAAATTCTATCAATCTCAAAGCCTGCCCACATATTATCATTCCTAAGTTATCCCTATGTAATTCTTCGCCAAAAGTATTTTGCTCATCAATCTACAAATGCATTTAAGAAATATTTGACTCCCACTCATTCCTAACTTCTGCTATGTATTGTAATCTATATTTAGATTGTTTCTTCCTGTAAGTATAAGCATTCAGTTCTTAGATAATGATAACATTGGTATTCCT

mRNA sequence

AACGATGGCGTAAAAATTCTCAACTTTGAACTACAAGTCGTCTGGACTGAACCTACTGAGAACTACACGTCGACTCATAGCTCTCTTCTTCGCTAACTAAAATTTCTGCTGCTCTCTTCTAAGCTTTCGATTCAAAAAAACTCCGATAGCTAAAGTAATTGCTGTTGGGGTGTTGCTGTTGTTTTTGATAAAGATGGTGTTCTTGTGTTGGTCTCGCCCGTCTCCTCAAGAGCAGAAGGCCTGCATTGAAAGGGCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAAGGGAAGAAAGCTCTTCAGAACTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCAACTCCAGTTCATCCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGTTGCCTCTTCAAATTGTGTATGTAAATGAGAATAGAAATACCAATAAGGGTAGGACATGCTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCTGGTGAAGAACGGTTTTCAATTGAGATGGACTCAAACAGTCAAGTGTGGTATGAAATTCTATCAATCTCAAAGCCTGCCCACATATTATCATTCCTAAGTTATCCCTATGTAATTCTTCGCCAAAAGTATTTTGCTCATCAATCTACAAATGCATTTAAGAAATATTTGACTCCCACTCATTCCTAACTTCTGCTATGTATTGTAATCTATATTTAGATTGTTTCTTCCTGTAAGTATAAGCATTCAGTTCTTAGATAATGATAACATTGGTATTCCT

Coding sequence (CDS)

ATGGTGTTCTTGTGTTGGTCTCGCCCGTCTCCTCAAGAGCAGAAGGCCTGCATTGAAAGGGCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAAGGGAAGAAAGCTCTTCAGAACTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCAACTCCAGTTCATCCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGTTGCCTCTTCAAATTGTGTATGTAAATGAGAATAGAAATACCAATAAGGGTAGGACATGCTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCTGGTGAAGAACGGTTTTCAATTGAGATGGACTCAAACAGTCAAGTGTGGTATGAAATTCTATCAATCTCAAAGCCTGCCCACATATTATCATTCCTAAGTTATCCCTATGTAATTCTTCGCCAAAAGTATTTTGCTCATCAATCTACAAATGCATTTAAGAAATATTTGACTCCCACTCATTCCTAA

Protein sequence

MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYVNENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSYPYVILRQKYFAHQSTNAFKKYLTPTHS*

Homology

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BLAST of MELO3C007951T2 vs. Swiss-Prot
Match: U548_ARATH (UPF0548 protein At2g17695 OS=Arabidopsis thaliana GN=At2g17695 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.2e-75
Identity = 127/202 (62.87%), Postives = 159/202 (78.71%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RPS ++Q+  I + G+FNY +K+RG ++   + L+ED  I ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV  G KFC+C KE LPWV+LPLQ+VYV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180
           +E+R + KG   F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI S SKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVILRQKYFAHQSTNAFKKYL 203
           PYV LRQK+FA  S+ A  K++
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHV 202

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BLAST of MELO3C007951T2 vs. Swiss-Prot
Match: U548_DICDI (UPF0548 protein OS=Dictyostelium discoideum GN=DDB_G0271742 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.2e-17
Identity = 62/206 (30.10%), Postives = 99/206 (48.06%), Query Frame = 1


Query: 5   CWSRPSPQEQKACIE--RAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARILVG 64
           C+ +PS  + K  I   R   F YS+ +   T + ++  + +       F ++  +I +G
Sbjct: 3   CFRKPSDSDIKQYINDRREEQFAYSNLY--GTQDYATKEEYEMDPKYSNFDVDQVKIQLG 62

Query: 65  SGVETYEKGKKALQNWRHFGLNWA-FVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYVN 124
           +GVE ++K   AL+ W+HF L+W  F   +TP+  G    + +K+   W++   +I Y+ 
Sbjct: 63  TGVECFQKAVAALKQWKHFDLDWVDFYFKNTPIAVGETVGILSKQVGFWILSFARINYLY 122

Query: 125 ENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIE-------MDSNSQVWYEILSISKPAHI 184
           +  +   G   F +  GTL+ H+  GEERF IE             V+YE+LS S+P++ 
Sbjct: 123 DG-DQEDGSIKFGYSYGTLKDHVEKGEERFVIEWVRDPDGAPDKGAVYYEMLSFSEPSYW 182

Query: 185 LSFLSYPYVILRQKYFAHQSTNAFKK 201
           LS L YP     Q  F   S N   K
Sbjct: 183 LSQLGYPVTRYFQNKFVVDSCNQMLK 205

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BLAST of MELO3C007951T2 vs. Swiss-Prot
Match: Y2035_DEIRA (UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=DR_2035 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-08
Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 1


Query: 58  RILVGSGVETYEKGKKALQNWRHFGLNWAFV---DSSTPV-HPGVKFCVCAKEFLPW--- 117
           R+ VG G   +E+ K AL+  + F  +W      ++STP+   G    +  + F PW   
Sbjct: 47  RVRVGEGEACWERAKAALRGGQMFQ-DWVLRPHGEASTPLSRQGATVVLLVRHFGPWGRR 106

Query: 118 -----VVLPLQIVYVNENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEI 177
                 ++  +++Y+ +  +       + FG GTL GHL+ GEERF +E D+   VW+++
Sbjct: 107 KWGLYSLMTNRVLYLVDEPDR------YGFGYGTLPGHLVRGEERFLLERDAGGAVWFDL 166

Query: 178 LSISKPAHILSFLSYPYVILRQK 189
            + S+ A   S  + P V   Q+
Sbjct: 167 TTFSRAALPFSRFAQPLVGAAQR 182

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BLAST of MELO3C007951T2 vs. TrEMBL
Match: A0A0A0KKV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507400 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 4.2e-114
Identity = 201/208 (96.63%), Postives = 204/208 (98.08%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDK-GISQEGFLLNHARI 60
           MVFLCWSRPSPQEQKACIERAGSFNY+SKFRGATANPSSCLQEDK GISQEGFLLNHARI
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 61  LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 121 VNENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLS 180
           VNENR+TNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILS SKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 181 YPYVILRQKYFAHQSTNAFKKYLTPTHS 208
           YPY+ILRQKYFAHQSTNA KKYLTPTHS
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLTPTHS 208

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BLAST of MELO3C007951T2 vs. TrEMBL
Match: M5W4V4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023767mg PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.1e-87
Identity = 153/207 (73.91%), Postives = 173/207 (83.57%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RPSP+EQKACI+R+GSFNY +KFRGAT    S LQEDKG+S  GFL NHAR+L
Sbjct: 1   MVFLSWIRPSPEEQKACIDRSGSFNYEAKFRGATTKSLSSLQEDKGLSNNGFLFNHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSGV+TYEKGK+ALQ+WRHFGLNWAFVD  TPV  GVKFCVC KEFLPWV++PLQ+VYV
Sbjct: 61  VGSGVDTYEKGKRALQDWRHFGLNWAFVDPKTPVQNGVKFCVCVKEFLPWVMMPLQVVYV 120

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180
           NENR + +    F FG GTLQGHLLAGEERFSIE+D N+QVWYEILS SKPAH LSF+ Y
Sbjct: 121 NENRPSKQSMASFRFGGGTLQGHLLAGEERFSIELDENNQVWYEILSFSKPAHPLSFIGY 180

Query: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 208
           PYV+LRQKYFAHQS+NA  K+L    S
Sbjct: 181 PYVMLRQKYFAHQSSNAIMKHLNALKS 207

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BLAST of MELO3C007951T2 vs. TrEMBL
Match: A0A067FVI3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028245mg PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.7e-86
Identity = 149/203 (73.40%), Postives = 172/203 (84.73%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RP+PQEQKACI+++G FNY +K++GATA P +CL+ED+G+S++GFLLNHAR+L
Sbjct: 6   MVFLSWGRPTPQEQKACIDKSGVFNYDTKYKGATAKPVACLKEDQGLSKDGFLLNHARVL 65

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSG+ETYEKGK AL+ WRHFGLNWAFVD  TP+  GVKFCVC KEFLPWV LPLQIVYV
Sbjct: 66  VGSGLETYEKGKTALKTWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLPWVTLPLQIVYV 125

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180
           NE+    K    F FGSGTLQGHLLAGEERFSIE+D N+QVWYEI+S SKPA  LSF+ Y
Sbjct: 126 NESIRKKKTAASFGFGSGTLQGHLLAGEERFSIELDDNNQVWYEIVSFSKPADFLSFIGY 185

Query: 181 PYVILRQKYFAHQSTNAFKKYLT 204
           PYV LRQKYFAHQS NA KK+LT
Sbjct: 186 PYVQLRQKYFAHQSVNAVKKHLT 208

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BLAST of MELO3C007951T2 vs. TrEMBL
Match: V4SI89_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026505mg PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.1e-85
Identity = 147/203 (72.41%), Postives = 171/203 (84.24%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RP+PQEQKACI+++G FNY +K++GATA P +CL+ED+G+S++GFLLNHAR+L
Sbjct: 1   MVFLSWGRPTPQEQKACIDKSGVFNYDTKYKGATAKPVACLKEDQGLSKDGFLLNHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSG+ETYEKGK AL+ WRHFGLNWAFVD  TP+  GVKFCVC KEFLPWV LPLQIVYV
Sbjct: 61  VGSGLETYEKGKTALKTWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLPWVTLPLQIVYV 120

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180
           NE+    K    F FGSGTLQGHLLAGEERFS+E+D N+QVWYEI+S SKPA  LSF+ Y
Sbjct: 121 NESIRKKKTAASFGFGSGTLQGHLLAGEERFSLELDENNQVWYEIVSFSKPADFLSFIGY 180

Query: 181 PYVILRQKYFAHQSTNAFKKYLT 204
           PYV LRQKYFAHQS  A KK+LT
Sbjct: 181 PYVQLRQKYFAHQSVTAVKKHLT 203

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BLAST of MELO3C007951T2 vs. TrEMBL
Match: A0A067FVN0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028245mg PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 9.0e-85
Identity = 149/204 (73.04%), Postives = 172/204 (84.31%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RP+PQEQKACI+++G FNY +K++GATA P +CL+ED+G+S++GFLLNHAR+L
Sbjct: 6   MVFLSWGRPTPQEQKACIDKSGVFNYDTKYKGATAKPVACLKEDQGLSKDGFLLNHARVL 65

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSG+ETYEKGK AL+ WRHFGLNWAFVD  TP+  GVKFCVC KEFLPWV LPLQIVYV
Sbjct: 66  VGSGLETYEKGKTALKTWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLPWVTLPLQIVYV 125

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLL-AGEERFSIEMDSNSQVWYEILSISKPAHILSFLS 180
           NE+    K    F FGSGTLQGHLL AGEERFSIE+D N+QVWYEI+S SKPA  LSF+ 
Sbjct: 126 NESIRKKKTAASFGFGSGTLQGHLLQAGEERFSIELDDNNQVWYEIVSFSKPADFLSFIG 185

Query: 181 YPYVILRQKYFAHQSTNAFKKYLT 204
           YPYV LRQKYFAHQS NA KK+LT
Sbjct: 186 YPYVQLRQKYFAHQSVNAVKKHLT 209

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BLAST of MELO3C007951T2 vs. TAIR10
Match: AT2G17695.1 (AT2G17695.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 282.3 bits (721), Expect = 2.4e-76
Identity = 127/202 (62.87%), Postives = 159/202 (78.71%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFL W RPS ++Q+  I + G+FNY +K+RG ++   + L+ED  I ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV  G KFC+C KE LPWV+LPLQ+VYV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180
           +E+R + KG   F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI S SKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVILRQKYFAHQSTNAFKKYL 203
           PYV LRQK+FA  S+ A  K++
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHV 202

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BLAST of MELO3C007951T2 vs. NCBI nr
Match: gi|659080608|ref|XP_008440883.1| (PREDICTED: UPF0548 protein At2g17695 isoform X1 [Cucumis melo])

HSP 1 Score: 433.7 bits (1114), Expect = 1.8e-118
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180
           NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY
Sbjct: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180

Query: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 208
           PYVILRQKYFAHQSTNAFKKYLTPTHS
Sbjct: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 207

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BLAST of MELO3C007951T2 vs. NCBI nr
Match: gi|449434104|ref|XP_004134836.1| (PREDICTED: UPF0548 protein At2g17695 [Cucumis sativus])

HSP 1 Score: 418.7 bits (1075), Expect = 6.0e-114
Identity = 201/208 (96.63%), Postives = 204/208 (98.08%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDK-GISQEGFLLNHARI 60
           MVFLCWSRPSPQEQKACIERAGSFNY+SKFRGATANPSSCLQEDK GISQEGFLLNHARI
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 61  LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 121 VNENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLS 180
           VNENR+TNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILS SKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 181 YPYVILRQKYFAHQSTNAFKKYLTPTHS 208
           YPY+ILRQKYFAHQSTNA KKYLTPTHS
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLTPTHS 208

[Close]

BLAST of MELO3C007951T2 vs. NCBI nr
Match: gi|1009144525|ref|XP_015889847.1| (PREDICTED: UPF0548 protein At2g17695 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 333.2 bits (853), Expect = 3.3e-88
Identity = 151/207 (72.95%), Postives = 177/207 (85.51%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCW+RPSPQEQK+CI+R+G+FNY +K+RGATA P SCL+EDK +S EGF LNHAR+L
Sbjct: 74  MVFLCWARPSPQEQKSCIDRSGAFNYDAKYRGATAKPLSCLKEDKELSHEGFALNHARVL 133

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSG+E YEKGK ALQ WRHFGLNWAFVD  TPV  G KFCVC KEFLPWV++PL++VYV
Sbjct: 134 VGSGIEAYEKGKNALQAWRHFGLNWAFVDPKTPVQNGAKFCVCVKEFLPWVMMPLKVVYV 193

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180
           +E ++T + +  F FGSGTLQGHLLAGEERFSIE+D N QVWYEILS SKPAH+LSF+ Y
Sbjct: 194 DE-KSTKQSKASFCFGSGTLQGHLLAGEERFSIELDENDQVWYEILSFSKPAHVLSFIGY 253

Query: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 208
           PYV+LRQKYF+HQSTNA  K+L P  S
Sbjct: 254 PYVMLRQKYFSHQSTNAVLKHLNPLQS 279

[Close]

BLAST of MELO3C007951T2 vs. NCBI nr
Match: gi|1009144535|ref|XP_015889852.1| (PREDICTED: UPF0548 protein At2g17695 isoform X6 [Ziziphus jujuba])

HSP 1 Score: 333.2 bits (853), Expect = 3.3e-88
Identity = 151/207 (72.95%), Postives = 177/207 (85.51%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCW+RPSPQEQK+CI+R+G+FNY +K+RGATA P SCL+EDK +S EGF LNHAR+L
Sbjct: 1   MVFLCWARPSPQEQKSCIDRSGAFNYDAKYRGATAKPLSCLKEDKELSHEGFALNHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSG+E YEKGK ALQ WRHFGLNWAFVD  TPV  G KFCVC KEFLPWV++PL++VYV
Sbjct: 61  VGSGIEAYEKGKNALQAWRHFGLNWAFVDPKTPVQNGAKFCVCVKEFLPWVMMPLKVVYV 120

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180
           +E ++T + +  F FGSGTLQGHLLAGEERFSIE+D N QVWYEILS SKPAH+LSF+ Y
Sbjct: 121 DE-KSTKQSKASFCFGSGTLQGHLLAGEERFSIELDENDQVWYEILSFSKPAHVLSFIGY 180

Query: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 208
           PYV+LRQKYF+HQSTNA  K+L P  S
Sbjct: 181 PYVMLRQKYFSHQSTNAVLKHLNPLQS 206

[Close]

BLAST of MELO3C007951T2 vs. NCBI nr
Match: gi|1009144533|ref|XP_015889851.1| (PREDICTED: UPF0548 protein At2g17695 isoform X5 [Ziziphus jujuba])

HSP 1 Score: 333.2 bits (853), Expect = 3.3e-88
Identity = 151/207 (72.95%), Postives = 177/207 (85.51%), Query Frame = 1


Query: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60
           MVFLCW+RPSPQEQK+CI+R+G+FNY +K+RGATA P SCL+EDK +S EGF LNHAR+L
Sbjct: 26  MVFLCWARPSPQEQKSCIDRSGAFNYDAKYRGATAKPLSCLKEDKELSHEGFALNHARVL 85

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120
           VGSG+E YEKGK ALQ WRHFGLNWAFVD  TPV  G KFCVC KEFLPWV++PL++VYV
Sbjct: 86  VGSGIEAYEKGKNALQAWRHFGLNWAFVDPKTPVQNGAKFCVCVKEFLPWVMMPLKVVYV 145

Query: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180
           +E ++T + +  F FGSGTLQGHLLAGEERFSIE+D N QVWYEILS SKPAH+LSF+ Y
Sbjct: 146 DE-KSTKQSKASFCFGSGTLQGHLLAGEERFSIELDENDQVWYEILSFSKPAHVLSFIGY 205

Query: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 208
           PYV+LRQKYF+HQSTNA  K+L P  S
Sbjct: 206 PYVMLRQKYFSHQSTNAVLKHLNPLQS 231

The following BLAST results are available for this feature:

BLAST of MELO3C007951T2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
U548_ARATH	4.2e-75	62.87	UPF0548 protein At2g17695 OS=Arabidopsis thaliana GN=At2g17695 PE=2 SV=1	[more]
U548_DICDI	5.2e-17	30.10	UPF0548 protein OS=Dictyostelium discoideum GN=DDB_G0271742 PE=3 SV=1	[more]
Y2035_DEIRA	2.0e-08	28.67	UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 2053...	[more]

BLAST of MELO3C007951T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKV8_CUCSA	4.2e-114	96.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507400 PE=4 SV=1	[more]
M5W4V4_PRUPE	1.1e-87	73.91	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023767mg PE=4 SV=1	[more]
A0A067FVI3_CITSI	3.7e-86	73.40	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028245mg PE=4 SV=1	[more]
V4SI89_9ROSI	3.1e-85	72.41	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026505mg PE=4 SV=1	[more]
A0A067FVN0_CITSI	9.0e-85	73.04	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028245mg PE=4 SV=1	[more]

BLAST of MELO3C007951T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17695.1	2.4e-76	62.87	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of MELO3C007951T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080608\|ref\|XP_008440883.1\|	1.8e-118	100.00	PREDICTED: UPF0548 protein At2g17695 isoform X1 [Cucumis melo]	[more]
gi\|449434104\|ref\|XP_004134836.1\|	6.0e-114	96.63	PREDICTED: UPF0548 protein At2g17695 [Cucumis sativus]	[more]
gi\|1009144525\|ref\|XP_015889847.1\|	3.3e-88	72.95	PREDICTED: UPF0548 protein At2g17695 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009144535\|ref\|XP_015889852.1\|	3.3e-88	72.95	PREDICTED: UPF0548 protein At2g17695 isoform X6 [Ziziphus jujuba]	[more]
gi\|1009144533\|ref\|XP_015889851.1\|	3.3e-88	72.95	PREDICTED: UPF0548 protein At2g17695 isoform X5 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR018960	DUF1990

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C007951	MELO3C007951	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C007951T2	MELO3C007951T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C007951T2.cds1	MELO3C007951T2.cds1	CDS
MELO3C007951T2.cds2	MELO3C007951T2.cds2	CDS
MELO3C007951T2.cds3	MELO3C007951T2.cds3	CDS
MELO3C007951T2.cds4	MELO3C007951T2.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018960	Domain of unknown function DUF1990	PFAM	PF09348	DUF1990	coord: 49..196 score: 2.0
None	No IPR available	PANTHER	PTHR34202	FAMILY NOT NAMED	coord: 1..200 score: 5.4E
None	No IPR available	PANTHER	PTHR34202:SF1	UPF0548 PROTEIN	coord: 1..200 score: 5.4E