MELO3C007489T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007489T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ubiquitin-conjugating enzyme
Location	chr8 : 3113723 .. 3117527 (-)
Sequence length	1570

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACCAGAGTCCAATCGAAGCCTAACTTTTTATTTGTTGACCTCCGTAGGGCTCACCCACGCTCGCCAAACCGCCCACCTTCCTCTCTCCCTCTCCATTTCCATTCTCTTTCACGCCTCTGCAACTCAGACCTATCTCCTCTCTCCTCTTCACAGGTTTGATTTCTTCACAGCCCCTTTTTCCTTTTCGATTTTGGGTTTTCTTCCTATTTCTTGCTCCCTTTCACTTCTTGTTCCGAAGGATTGCTGTTTATCGCCTTTTTTCTTCATTGATTCTGTCTTCTCTATTGGGTCTTTGGAATATCGGCTCTGGATTGTTTTCTTGTAATTAGAGAGTAATTATGTTTTGATTACTCGCGGAATCGCATTGTAATTGTGTTGGCTCTGGTTTCAACTTTTTTTTTTTTTTTCGTTTTATAACTCAAGATTTGAATGTTCTTATTTGTCTGGGACGATTTCTAGTGTTGGGATTGTGGATAATATGATTAGTTTCCATTCGAGTGTTTTCTTTGTGGATTATGTCCGGTGGGTTTTGTTGGTATGTTCGATTCTAAGTGGCATGTTCTTTGTTGAGAGGTTTTGGGAGGATCAAGAATCTCAACCCTTTTGACTTTTTTGTTTGCCATGGAGATTTAGTTTGGGTTTCTATAGTCAATTCGGAATTGGGTTTATGTTGGATCTTAGTGATGTCACAAGTCCATGACTCAGCTGTGTGCTTGAAGAGGTTTTGTTTGAACGCATCCGCTCTTTCCTGGAAGATGCAGATTGCCTTCATAGGCTGTTCTCTTTATTTTGTTGTAAAATTTTTCATTCGAGAGGATCGGAAGGGTTTTTGAAGGTTTGGAGGGAGGGAGACTTATTTTTATTTCTCTAATTGGATTTCCTTAAATAAGTTGTTTAGTAAACTCTCCCTCTTTCTCTCTCATAAATAACATTCAGCTAGGGCTCATTTTTCTTGATGCTGTTATGGTATTAGTAGCCTATTCTATGGTGGTTTGATCTTGTTTTTTCGTGGCATATTTGTGTTGTTTCATTCTTGTCATTGAAATTTGGTTTCTTATCCTTAGAGGTAATTTTTTGAAATAGCATAACATTTGCAAGGGGTGTAATTGCATATTCTGCTGCAGGAGATATGATTAAGCTATTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGGGTACCTACAAAGAAGCAAAGTGCTGGGGAACTGCGTCTTCATAAAGGTTGGGTTATTAATAGGGTTTATTGAAAACTTGGTCTCGTTAGAGGTGATGAGTTGTTTGAAACTATATCAATTTGGTTTCCCATATATGAGTAATGATTATGGGTCATACATTTGAAGGTTTTTTTTTTTTTCTGTGGATTAGGCATTGTCACGCCAGTCATTTAGTATGATATATTGCGAACTTTAGTATATTTTTTATAATCTAATTTCTTTTTGATTGGTTTGAGACTTGAAGACTTCATGTACAAACAAGATGTCTTATATGCAAATACCATGTTTCCCCGTATGTGTCACATCCACATATGATAGTATATAATTATTTTATGTTTACAAGGATCCTGAGTTTATATAGAGACAGATATCCGGTCTGCATTTTCCATCCTCTTGATTTGCTTGTCCTGGCTAGGAGTCAACTGGAATGTTCGAGTGCATTAGAATTTTCATGTATCATGGTCCTAGGCTAACCTCCATTGAATTTTATATTATTATTTGATTGTTTAGACAAGATTTTCATAGGTAATTTTGTGGTAGATATTGATTGGAATTTAAATTTATCTGTGAAAAATTTTGAGATACATGGTAATTGGTGCTTGAGAACACAAAGGTTCTATAACTTTGCTTGATGTGTGATGAAATGAGGAGTGAACCCAAAACTATCTTTCCAGTTATAAGATTGTTGGCCAATAGAAGTGAATTTTGATCTCTTCCCTTAATTTAATCATGAAAGAACCTTGCCACAGTTCAACTGAGATATGTGTTATTAAATCAATTCACTTGATCGGTACTGGAAATTTTGCTGGTCTTGTGAAAAAGGCGTTTCATCCCAAGACATTATCTGTTTCTAAGATGTTAATGAAGTTTGTGATCATATATGATGTCGTCTTATCACATTTAGTAATGTTGGGTTGGGGGCATGATGTCCCAAAGAATCTTGATAGCTAAAAAAAACATGATTGTAGATGCCCTGGAGTGATCTATTTTGCATGTTTTTCTTATTTCTGTTCATGTATTCTAATTTGAGGGAGAGCTACTTGATAGTTAGTTATGTTGGTGCTTAATCTGTTACAGATATTAGTGAGCTGAATCTACCAAAATCGTGTAACATAACCTTTCCCAATGGCAAGGATGACCTCATGAACTTTGAGGTGTCAATACGACCTGACGAGGGATATTATTTGTAAGTATTCTCTTTTCTCCTATGTTCACACTCATGCAATCTCTTATGGTGTGGAGAATACTTTCCTCGCCTTGTTAATTTATTTCATCTAAACGTCTTAACTCTGAACCAGAAATAAAAATGGAAACTAACACAAAATATTCTTGATATATAGAAAGAAAATTGTAAGTTTCCAATCAGTTCAGGAGCATTGTACTCTCCCACAGACTAATTCTAGAAAATTGCTAATCCCAAATTCTCTTGCTCCATCTGTTTATGCCTTCCGGCTTTCCTAATAATAATTTTCTCAATGTTTACATACAAATATTCCTAACAGCTCGCTTTTCACAAAATTACAGAGGAGGCACGTTTTATTTCTCCTTTACAGTTTCCCCCATCTATCCGCATGAAGCACCGAAAGTCAAGTGCAAGACAAAGGTAAACCTGAGTGGCTTCTTACCCACAGCATTTGATCCTTTCAGTATAGAAAGCCTAAGGGAATATTCTCTATATAGTGATTACTTATACTTTATGCAGGTTTACCATCCAAATATTGACTTGGAAGGAAATGTGTGCCTCAACATTTTACGGGAAGATTGGAAGCCTGTTCTCAATATTAACACTGTTATTTATGGACTCTACCATTTGTTCACGGTATGAACAAAGCATGATTAGTAAATGGTTGCAGTATGATGAACTTTTAACATCATAAGCTGACCCCTTACCTTGTTTTGGCGATGTCCTACCAGGAACCAAATGATGAAGACCCACTGAATCATGAAGCTGCTGCAGTTCTAAGAGACAACCCGAAGTTGTTTGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTATGTGGGGCAGACCTTTTTCGCACGATGTATGTAACTCACTCTTTATCCTTCACGTTCATCTTTTCCTGCGCTGTATGTAGCTAGCTTTTGTCTCTTGGTACATTAAGTGCTTATTTAGAAATATCCCATCCATTCACCTACGTTTGTGTTAGCCCAATGAACTTAGTGGTATTAATGTGTATCATTTCTATATTGTCAATTAACATGGTTATATTTTCCTCAATATTTTGGATGGAAGCCATGGCAATAGGGGCTGGCATAGTCTTTCAATCCTGATTTTGTTTAGAGAACTTCCAAATTTGTCTCATTCATCATCCCTATGCTATGCCTCGGCCTACTTCTGGCCGTTTGTTTGATATTCAAAAAGGAAGCTGCCAAGGGAGGAATGCTTAGGTAATGATGTTCCATGTGGTTCTTGTATTCTTTGGAATTTGGATCCCCACCCACCAATTCTTAAGTTGGAAAGATGATAGAGGATTGAATTAGTGAAAATAATCTTCTCTAAGTCTGTAGGATCAGATGAGATGTGATATCAATCGAATTATGAATAAATT

mRNA sequence

CTACCAGAGTCCAATCGAAGCCTAACTTTTTATTTGTTGACCTCCGTAGGGCTCACCCACGCTCGCCAAACCGCCCACCTTCCTCTCTCCCTCTCCATTTCCATTCTCTTTCACGCCTCTGCAACTCAGACCTATCTCCTCTCTCCTCTTCACAGGAGATATGATTAAGCTATTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGGGTACCTACAAAGAAGCAAAGTGCTGGGGAACTGCGTCTTCATAAAGATATTAGTGAGCTGAATCTACCAAAATCGTGTAACATAACCTTTCCCAATGGCAAGGATGACCTCATGAACTTTGAGGTGTCAATACGACCTGACGAGGGATATTATTTGTAAGTATTCTCTTTTCTCCTATGTTCACACTCATGCAATCTCTTATGGTGTGGAGAATACTTTCCTCGCCTTGTTAATTTATTTCATCTAAACGTCTTAACTCTGAACCAGAAATAAAAATGGAAACTAACACAAAATATTCTTGATATATAGAAAGAAAATTGTAAGTTTCCAATCAGTTCAGGAGCATTGTACTCTCCCACAGACTAATTCTAGAAAATTGCTAATCCCAAATTCTCTTGCTCCATCTGTTTATGCCTTCCGGCTTTCCTAATAATAATTTTCTCAATGTTTACATACAAATATTCCTAACAGCTCGCTTTTCACAAAATTACAGAGGAGGCACGTTTTATTTCTCCTTTACAGTTTCCCCCATCTATCCGCATGAAGCACCGAAAGTCAAGTGCAAGACAAAGGTTTACCATCCAAATATTGACTTGGAAGGAAATGTGTGCCTCAACATTTTACGGGAAGATTGGAAGCCTGTTCTCAATATTAACACTGTTATTTATGGACTCTACCATTTGTTCACGGAACCAAATGATGAAGACCCACTGAATCATGAAGCTGCTGCAGTTCTAAGAGACAACCCGAAGTTGTTTGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTATGTGGGGCAGACCTTTTTCGCACGATGTATGTAACTCACTCTTTATCCTTCACGTTCATCTTTTCCTGCGCTGTATGTAGCTAGCTTTTGTCTCTTGGTACATTAAGTGCTTATTTAGAAATATCCCATCCATTCACCTACGTTTGTGTTAGCCCAATGAACTTAGTGGTATTAATGTGTATCATTTCTATATTGTCAATTAACATGGTTATATTTTCCTCAATATTTTGGATGGAAGCCATGGCAATAGGGGCTGGCATAGTCTTTCAATCCTGATTTTGTTTAGAGAACTTCCAAATTTGTCTCATTCATCATCCCTATGCTATGCCTCGGCCTACTTCTGGCCGTTTGTTTGATATTCAAAAAGGAAGCTGCCAAGGGAGGAATGCTTAGGTAATGATGTTCCATGTGGTTCTTGTATTCTTTGGAATTTGGATCCCCACCCACCAATTCTTAAGTTGGAAAGATGATAGAGGATTGAATTAGTGAAAATAATCTTCTCTAAGTCTGTAGGATCAGATGAGATGTGATATCAATCGAATTATGAATAAATT

Coding sequence (CDS)

ATGCCTTCCGGCTTTCCTAATAATAATTTTCTCAATGTTTACATACAAATATTCCTAACAGCTCGCTTTTCACAAAATTACAGAGGAGGCACGTTTTATTTCTCCTTTACAGTTTCCCCCATCTATCCGCATGAAGCACCGAAAGTCAAGTGCAAGACAAAGGTTTACCATCCAAATATTGACTTGGAAGGAAATGTGTGCCTCAACATTTTACGGGAAGATTGGAAGCCTGTTCTCAATATTAACACTGTTATTTATGGACTCTACCATTTGTTCACGGAACCAAATGATGAAGACCCACTGAATCATGAAGCTGCTGCAGTTCTAAGAGACAACCCGAAGTTGTTTGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTATGTGGGGCAGACCTTTTTCGCACGATGTATGTAA

Protein sequence

MPSGFPNNNFLNVYIQIFLTARFSQNYRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM*

Homology

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BLAST of MELO3C007489T1 vs. Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.9e-56
Identity = 99/112 (88.39%), Postives = 103/112 (91.96%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y  GTF F+F VSP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 73  YHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 132

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL+HLFTEPN EDPLNH+AAAVLRDNPKLFE+NVRRAM GGYVGQTFF RC+
Sbjct: 133 GLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFFPRCI 184

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BLAST of MELO3C007489T1 vs. Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.9e-52
Identity = 103/136 (75.74%), Postives = 107/136 (78.68%), Query Frame = 1


Query: 5   FPN--NNFLNVYIQIFLTARFSQNYRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDL 64
           FPN  N+ +N  + I     +   Y  G F FSF VS +YPHEAPKVKCKTKVYHPNIDL
Sbjct: 53  FPNGKNDLMNFEVTIKPDEGY---YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDL 112

Query: 65  EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRR 124
           EGNVCLNILREDWKPVLNINTVIYGL+HLFTEPN EDPLNHEAAAVLRDNPK FE NVRR
Sbjct: 113 EGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRR 172

Query: 125 AMAGGYVGQTFFARCM 139
           AM GG VGQT F RCM
Sbjct: 173 AMMGGQVGQTSFPRCM 185

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BLAST of MELO3C007489T1 vs. Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-43
Identity = 79/112 (70.54%), Postives = 91/112 (81.25%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y+GG F FSF V   YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN++IY
Sbjct: 71  YKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIY 130

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL +LF EPN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+
Sbjct: 131 GLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182

[Close]

BLAST of MELO3C007489T1 vs. Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-43
Identity = 79/112 (70.54%), Postives = 91/112 (81.25%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y+GG F FSF V   YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN++IY
Sbjct: 71  YKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIY 130

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL +LF EPN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+
Sbjct: 131 GLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182

[Close]

BLAST of MELO3C007489T1 vs. Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.3e-43
Identity = 78/112 (69.64%), Postives = 90/112 (80.36%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y+ G F FSF V   YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDWKPVL IN++IY
Sbjct: 71  YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIY 130

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL +LF EPN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+
Sbjct: 131 GLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182

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BLAST of MELO3C007489T1 vs. TrEMBL
Match: A0A0A0KJ88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487630 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.3e-59
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF RCM
Sbjct: 132 GLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFPRCM 183

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BLAST of MELO3C007489T1 vs. TrEMBL
Match: A0A022RZJ4_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014626mg PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.5e-56
Identity = 103/112 (91.96%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF FSF +SPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINT+IY
Sbjct: 72  YLGGTFLFSFQISPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPN EDPLNHEAAAVLRDNPK+FESNVRRAM+GGYVGQTFFARC+
Sbjct: 132 GLYHLFTEPNHEDPLNHEAAAVLRDNPKMFESNVRRAMSGGYVGQTFFARCL 183

[Close]

BLAST of MELO3C007489T1 vs. TrEMBL
Match: A0A151TI36_CAJCA (NEDD8-conjugating enzyme Ubc12 OS=Cajanus cajan GN=KK1_013023 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.5e-56
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF FSF VSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPN EDPLNHEAAAVLRDNPK+FESNVRRAMAGGYVGQTFF RC+
Sbjct: 132 GLYHLFTEPNYEDPLNHEAAAVLRDNPKMFESNVRRAMAGGYVGQTFFPRCI 183

[Close]

BLAST of MELO3C007489T1 vs. TrEMBL
Match: I3SJX4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.5e-56
Identity = 110/136 (80.88%), Postives = 116/136 (85.29%), Query Frame = 1


Query: 5   FPN--NNFLNVYIQIFLTARFSQNYRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDL 64
           FPN  ++ +N  + I     F   Y GGTF F+F VSPIYPHEAPKVKCKTKVYHPNIDL
Sbjct: 51  FPNGKDDLMNFEVSIRPDDGF---YLGGTFLFTFQVSPIYPHEAPKVKCKTKVYHPNIDL 110

Query: 65  EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRR 124
           EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPN EDPLNHEAA VLR+NPKLFESNVRR
Sbjct: 111 EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNSEDPLNHEAATVLRENPKLFESNVRR 170

Query: 125 AMAGGYVGQTFFARCM 139
           AMAGGYVGQTFF RCM
Sbjct: 171 AMAGGYVGQTFFPRCM 183

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BLAST of MELO3C007489T1 vs. TrEMBL
Match: Q9FT39_SOLLC (RUB1 conjugating enzyme (Fragment) OS=Solanum lycopersicum GN=RCE1 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.9e-56
Identity = 102/112 (91.07%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF FSF++SPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINT+IY
Sbjct: 43  YMGGTFTFSFSISPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIY 102

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPN EDPLNH+AAAVLRDNPK+FESNVRRAM GGYVGQTFF RCM
Sbjct: 103 GLYHLFTEPNHEDPLNHDAAAVLRDNPKMFESNVRRAMHGGYVGQTFFTRCM 154

[Close]

BLAST of MELO3C007489T1 vs. TAIR10
Match: AT4G36800.1 (AT4G36800.1 RUB1 conjugating enzyme 1)

HSP 1 Score: 219.2 bits (557), Expect = 1.6e-57
Identity = 99/112 (88.39%), Postives = 103/112 (91.96%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y  GTF F+F VSP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 73  YHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 132

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GL+HLFTEPN EDPLNH+AAAVLRDNPKLFE+NVRRAM GGYVGQTFF RC+
Sbjct: 133 GLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFFPRCI 184

[Close]

BLAST of MELO3C007489T1 vs. TAIR10
Match: AT2G18600.1 (AT2G18600.1 Ubiquitin-conjugating enzyme family protein)

HSP 1 Score: 206.5 bits (524), Expect = 1.1e-53
Identity = 103/136 (75.74%), Postives = 107/136 (78.68%), Query Frame = 1


Query: 5   FPN--NNFLNVYIQIFLTARFSQNYRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDL 64
           FPN  N+ +N  + I     +   Y  G F FSF VS +YPHEAPKVKCKTKVYHPNIDL
Sbjct: 53  FPNGKNDLMNFEVTIKPDEGY---YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDL 112

Query: 65  EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRR 124
           EGNVCLNILREDWKPVLNINTVIYGL+HLFTEPN EDPLNHEAAAVLRDNPK FE NVRR
Sbjct: 113 EGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRR 172

Query: 125 AMAGGYVGQTFFARCM 139
           AM GG VGQT F RCM
Sbjct: 173 AMMGGQVGQTSFPRCM 185

[Close]

BLAST of MELO3C007489T1 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-19
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GG F  S    P YP + PKV  KTKVYHPNI+  G++CL+IL+E W P L I+ V+ 
Sbjct: 45  YAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLL 104

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVR 122
            +  L T+PN +DPL  E A + + +   +ES  R
Sbjct: 105 SICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTAR 139

[Close]

BLAST of MELO3C007489T1 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-18
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GG F  +    P YP + PKV  +TKV+HPNI+  G++CL+IL+E W P L I+ V+ 
Sbjct: 45  YAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLL 104

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVR 122
            +  L T+PN +DPL  E A + + +   +ES  R
Sbjct: 105 SICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR 139

[Close]

BLAST of MELO3C007489T1 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-18
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GG F  +    P YP + PKV  +TKV+HPNI+  G++CL+IL+E W P L I+ V+ 
Sbjct: 75  YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLL 134

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVR 122
            +  L T+PN +DPL  E A + + +   +ES  R
Sbjct: 135 SICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR 169

[Close]

BLAST of MELO3C007489T1 vs. NCBI nr
Match: gi|659079246|ref|XP_008440154.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 5.7e-60
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM
Sbjct: 132 GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 183

[Close]

BLAST of MELO3C007489T1 vs. NCBI nr
Match: gi|778718069|ref|XP_011657802.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 4.8e-59
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF RCM
Sbjct: 132 GLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFPRCM 183

[Close]

BLAST of MELO3C007489T1 vs. NCBI nr
Match: gi|848853882|ref|XP_012845722.1| (PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Erythranthe guttata])

HSP 1 Score: 226.9 bits (577), Expect = 2.2e-56
Identity = 103/112 (91.96%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF FSF +SPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINT+IY
Sbjct: 72  YLGGTFLFSFQISPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPN EDPLNHEAAAVLRDNPK+FESNVRRAM+GGYVGQTFFARC+
Sbjct: 132 GLYHLFTEPNHEDPLNHEAAAVLRDNPKMFESNVRRAMSGGYVGQTFFARCL 183

[Close]

BLAST of MELO3C007489T1 vs. NCBI nr
Match: gi|1012355530|gb|KYP66717.1| (NEDD8-conjugating enzyme Ubc12 [Cajanus cajan])

HSP 1 Score: 225.7 bits (574), Expect = 5.0e-56
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 27  YRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 86
           Y GGTF FSF VSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY
Sbjct: 72  YLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIY 131

Query: 87  GLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFARCM 139
           GLYHLFTEPN EDPLNHEAAAVLRDNPK+FESNVRRAMAGGYVGQTFF RC+
Sbjct: 132 GLYHLFTEPNYEDPLNHEAAAVLRDNPKMFESNVRRAMAGGYVGQTFFPRCI 183

[Close]

BLAST of MELO3C007489T1 vs. NCBI nr
Match: gi|388501480|gb|AFK38806.1| (unknown [Lotus japonicus])

HSP 1 Score: 225.3 bits (573), Expect = 6.5e-56
Identity = 110/136 (80.88%), Postives = 116/136 (85.29%), Query Frame = 1


Query: 5   FPN--NNFLNVYIQIFLTARFSQNYRGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDL 64
           FPN  ++ +N  + I     F   Y GGTF F+F VSPIYPHEAPKVKCKTKVYHPNIDL
Sbjct: 51  FPNGKDDLMNFEVSIRPDDGF---YLGGTFLFTFQVSPIYPHEAPKVKCKTKVYHPNIDL 110

Query: 65  EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRR 124
           EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPN EDPLNHEAA VLR+NPKLFESNVRR
Sbjct: 111 EGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNSEDPLNHEAATVLRENPKLFESNVRR 170

Query: 125 AMAGGYVGQTFFARCM 139
           AMAGGYVGQTFF RCM
Sbjct: 171 AMAGGYVGQTFFPRCM 183

The following BLAST results are available for this feature:

BLAST of MELO3C007489T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RCE1_ARATH	2.9e-56	88.39	NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1	[more]
UB12L_ARATH	1.9e-52	75.74	Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=...	[more]
UBC12_XENTR	1.3e-43	70.54	NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1	[more]
UBC12_XENLA	1.3e-43	70.54	NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1	[more]
UBC12_MOUSE	6.3e-43	69.64	NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=1 SV=1	[more]

BLAST of MELO3C007489T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ88_CUCSA	3.3e-59	97.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487630 PE=3 SV=1	[more]
A0A022RZJ4_ERYGU	1.5e-56	91.96	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014626mg PE=3 SV=1	[more]
A0A151TI36_CAJCA	3.5e-56	93.75	NEDD8-conjugating enzyme Ubc12 OS=Cajanus cajan GN=KK1_013023 PE=3 SV=1	[more]
I3SJX4_LOTJA	4.5e-56	80.88	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
Q9FT39_SOLLC	5.9e-56	91.07	RUB1 conjugating enzyme (Fragment) OS=Solanum lycopersicum GN=RCE1 PE=2 SV=1	[more]

BLAST of MELO3C007489T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36800.1	1.6e-57	88.39	RUB1 conjugating enzyme 1	[more]
AT2G18600.1	1.1e-53	75.74	Ubiquitin-conjugating enzyme family protein	[more]
AT3G08690.1	1.4e-19	45.26	ubiquitin-conjugating enzyme 11	[more]
AT5G53300.1	2.0e-18	42.11	ubiquitin-conjugating enzyme 10	[more]
AT4G27960.2	2.0e-18	42.11	ubiquitin conjugating enzyme 9	[more]

BLAST of MELO3C007489T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079246\|ref\|XP_008440154.1\|	5.7e-60	99.11	PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis melo]	[more]
gi\|778718069\|ref\|XP_011657802.1\|	4.8e-59	97.32	PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis sativus]	[more]
gi\|848853882\|ref\|XP_012845722.1\|	2.2e-56	91.96	PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Erythranthe guttata]	[more]
gi\|1012355530\|gb\|KYP66717.1\|	5.0e-56	93.75	NEDD8-conjugating enzyme Ubc12 [Cajanus cajan]	[more]
gi\|388501480\|gb\|AFK38806.1\|	6.5e-56	80.88	unknown [Lotus japonicus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR023313	UBQ-conjugating_AS

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C007489	MELO3C007489	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C007489T1	MELO3C007489T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C007489T1.cds3	MELO3C007489T1.cds3	CDS
MELO3C007489T1.cds2	MELO3C007489T1.cds2	CDS
MELO3C007489T1.cds1	MELO3C007489T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 19..123 score: 1.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 27..118 score: 26
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 8..124 score: 4.0
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 8..133 score: 1.32
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 56..71 scor
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 27..138 score: 6.4
None	No IPR available	PANTHER	PTHR24067:SF123	NEDD8-CONJUGATING ENZYME UBC12-RELATED	coord: 27..138 score: 6.4
None	No IPR available	SMART	SM00212	ubc_7	coord: 1..129 score: 4.2