MELO3C007074.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGCATTCAGCACAAACCTTTTTCCAAAGTACCAAACAGAAAAAAGAGTTTCCGGAAACAAAAAAGAAAAGAAGGATTTTAAAAGCGCTTTCGTTTGCTTCTCCTTTACGCCAAACCCCAATCTTCTTCCCATGATTATCCTTAACAACTCTCAATCACTCTTTCCCCTTTCTTCCCTATCCCTTCCCTAATTCCACTACTTTATATTCCAACCTAATCCTCCCTTCACCGGAATCACCCACAATGATTCCGATCAAATCAGCGGCGGCTATCGTCGCCTTCTTCTCACTGATCGCCGCGATCGCGGCAGTGTCGGAGATACGCCCGTCAGAGCACGGGTTGGAGTTTCAGAGCCCTCCACCCGCTGGAGAAAAATCGTCACCCGAGATGCGTTCGTTTTTCGGAGGAATAACGTCACCGACACCGGAAGTGGCATTGCCGATACCGAATACGATGAATTCGAGTGAATCGCCGGGATGGTGGAACCACCGTGACGGTGGGAATAAACGACTACGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGGTGTCACTTTATTAGTGGGTTCTACGTTATTCTACATTTTTAAGGCCAAAAATAAAAGATCGTTGCCGTTATCAACAAATAATAATCACAAATAAAAGTATGATCATAATCATAATTAATGATAACTTTACACCCGGAATTTAGCTGTCTTGAAATAGCCATATTTCTTAGTTCCAATTTTTTCTTACAGTTTGAGAATTCATATTTGATTTGATTATCTAATTAGACAATTTTATTGCCATTAATTGTTTGATGGGAATCTATAATCTCATGTATCAATTAATTTGTCTATATTAATAAAAGAAGAAAAAATAAAACAGGGAGAAGTTTGTTTGGAGTTTGTCTCTTTTATAAGTAAATAATATTCTCTTCTTAAGTTT ATAGCATTCAGCACAAACCTTTTTCCAAAGTACCAAACAGAAAAAAGAGTTTCCGGAAACAAAAAAGAAAAGAAGGATTTTAAAAGCGCTTTCGTTTGCTTCTCCTTTACGCCAAACCCCAATCTTCTTCCCATGATTATCCTTAACAACTCTCAATCACTCTTTCCCCTTTCTTCCCTATCCCTTCCCTAATTCCACTACTTTATATTCCAACCTAATCCTCCCTTCACCGGAATCACCCACAATGATTCCGATCAAATCAGCGGCGGCTATCGTCGCCTTCTTCTCACTGATCGCCGCGATCGCGGCAGTGTCGGAGATACGCCCGTCAGAGCACGGGTTGGAGTTTCAGAGCCCTCCACCCGCTGGAGAAAAATCGTCACCCGAGATGCGTTCGTTTTTCGGAGGAATAACGTCACCGACACCGGAAGTGGCATTGCCGATACCGAATACGATGAATTCGAGTGAATCGCCGGGATGGTGGAACCACCGTGACGGTGGGAATAAACGACTACGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGGTGTCACTTTATTAGTGGGTTCTACGTTATTCTACATTTTTAAGGCCAAAAATAAAAGATCGTTGCCGTTATCAACAAATAATAATCACAAATAAAAGTATGATCATAATCATAATTAATGATAACTTTACACCCGGAATTTAGCTGTCTTGAAATAGCCATATTTCTTAGTTCCAATTTTTTCTTACAGTTTGAGAATTCATATTTGATTTGATTATCTAATTAGACAATTTTATTGCCATTAATTGTTTGATGGGAATCTATAATCTCATGTATCAATTAATTTGTCTATATTAATAAAAGAAGAAAAAATAAAACAGGGAGAAGTTTGTTTGGAGTTTGTCTCTTTTATAAGTAAATAATATTCTCTTCTTAAGTTT ATGATTCCGATCAAATCAGCGGCGGCTATCGTCGCCTTCTTCTCACTGATCGCCGCGATCGCGGCAGTGTCGGAGATACGCCCGTCAGAGCACGGGTTGGAGTTTCAGAGCCCTCCACCCGCTGGAGAAAAATCGTCACCCGAGATGCGTTCGTTTTTCGGAGGAATAACGTCACCGACACCGGAAGTGGCATTGCCGATACCGAATACGATGAATTCGAGTGAATCGCCGGGATGGTGGAACCACCGTGACGGTGGGAATAAACGACTACGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGGTGTCACTTTATTAGTGGGTTCTACGTTATTCTACATTTTTAAGGCCAAAAATAAAAGATCGTTGCCGTTATCAACAAATAATAATCACAAATAA MIPIKSAAAIVAFFSLIAAIAAVSEIRPSEHGLEFQSPPPAGEKSSPEMRSFFGGITSPTPEVALPIPNTMNSSESPGWWNHRDGGNKRLRNALLVATAACGITGVTLLVGSTLFYIFKAKNKRSLPLSTNNNHK
BLAST of MELO3C007074.2.1 vs. NCBI nr
Match: KGN49462.1 (hypothetical protein Csa_6G525480 [Cucumis sativus]) HSP 1 Score: 249.2 bits (635), Expect = 7.9e-63 Identity = 125/135 (92.59%), Postives = 130/135 (96.30%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. NCBI nr
Match: XP_023518243.1 (uncharacterized protein LOC111781779 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.2 bits (544), Expect = 2.8e-52 Identity = 109/136 (80.15%), Postives = 119/136 (87.50%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. NCBI nr
Match: XP_022925668.1 (uncharacterized protein LOC111433017 [Cucurbita moschata]) HSP 1 Score: 212.6 bits (540), Expect = 8.2e-52 Identity = 104/135 (77.04%), Postives = 116/135 (85.93%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. NCBI nr
Match: XP_023003567.1 (uncharacterized protein LOC111497130 [Cucurbita maxima]) HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51 Identity = 105/134 (78.36%), Postives = 117/134 (87.31%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. NCBI nr
Match: XP_022926736.1 (uncharacterized protein LOC111433768 [Cucurbita moschata]) HSP 1 Score: 210.3 bits (534), Expect = 4.1e-51 Identity = 108/136 (79.41%), Postives = 118/136 (86.76%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. TAIR10
Match: AT4G21740.1 (unknown protein) HSP 1 Score: 45.8 bits (107), Expect = 2.4e-05 Identity = 37/133 (27.82%), Postives = 54/133 (40.60%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. TrEMBL
Match: tr|A0A0A0KM65|A0A0A0KM65_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525480 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 5.2e-63 Identity = 125/135 (92.59%), Postives = 130/135 (96.30%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. TrEMBL
Match: tr|A0A067KFC4|A0A067KFC4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09219 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.3e-18 Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. TrEMBL
Match: tr|A0A2I4H4I8|A0A2I4H4I8_9ROSI (uncharacterized protein LOC109013441 OS=Juglans regia OX=51240 GN=LOC109013441 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.8e-16 Identity = 56/134 (41.79%), Postives = 80/134 (59.70%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. TrEMBL
Match: tr|A0A1S3UQL7|A0A1S3UQL7_VIGRR (uncharacterized protein LOC106767868 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767868 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.8e-16 Identity = 53/125 (42.40%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of MELO3C007074.2.1 vs. TrEMBL
Match: tr|A0A2C9UKP9|A0A2C9UKP9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G123400 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15 Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
|