MELO3C006770T2 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C006770T2
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Locationchr6 : 5842076 .. 5843830 (-)
Sequence length467
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCCGTTTGTAAAAAGGTGCGGAGAGCGATAAATATCTCAAATTTAGGGTTTTTGTTGGTGAAACGAATCCGGAGGTTGAAGACGATGGCGAAATTCAATGTAGTTCAGAAGCAAAGACGGGCTGTTAGAGCTCAGATAAAGAGAGACGCCCATGGTGATCCTTTGACCAAGAAGCTCAAGATCAAGCAACAGCCTACTTATGTATCCAACAAGCGTAAGCGCAAATTGATGAAGAAAAAACGCAGAGTACGGTTTTCTTTTTTGCTTTCTCTTGTTTCTACTTTATATTTTCAATTCAAAGTGTCTCTGTTGCGAATTGATTGTTCTTTTTTTTTTTTTCCTTTTTCGATTCTTACTGTTTTCAGGAAGAGAAGGAAGCTTTACAGATGGGTCTCACGAACATGGAAGATGTTGAAATGGCTGTTGCTGAAGGTAATGAAGCTTTCTTCTGCTTATTGTTAAATGGTGTTATGAAATCGGGATGCTATTGCTAATTTCATATTTGAACTGTTTGCTTCAATTGTCAAGTTCCTATGGGGGGTTTCTTCCAATTTTAAATCGTTGGAATGGAGGAGTGAATTAGTTTCGTTACTGGGTATTAAGTTTTTTTTTTCCCACTCTTAAGTCAGTTTAGGAATCAAGCGGCTTTTAAGCGAGGCCAAATCGATTAATTGTACGAATGACGTAATAATAGAGGCAATTTTGGTTAGATAAGTGTACCCAACTTGCTAGCTTCTTCTTAACAGAGATGCTCTACACATATTGTAAGAAGTGCTATTTGGACTTTGTGAGTTCGTTTAAACCGAGAGTGGGATGGGAATCTCTTATCCATAAGAAGGTGGGATAGGAATCACTTGATCAAAGAACTTGGACTGCTCGGGGCATGTATTACAGTGATTTTGAAATTGTTAAAATCTTGTTCAAAAATTAAAATCGCCTTGAAACATGTCCCTAATCATTCAAAATCAAATTCAGTTTTGACTGCACAAGGGCCATGTTTAAGACACTTTTTGGAATGATTTTGTACCTGACAAAAATTATCTTAAACCATTACAAAATCACTTCGGAGCATGCCTTCAAAGTCTCAATATAATATTTTCTATTGCCTCCGCTTTTCTTTTCTTCCTCACTTCCTCAAGCTAAAGGAATTTTTTAATTAATGGAGCAGTTGTTGAAGTTGGAAAGATACATTTACGAATGGTTCGTGTGGAAGGGCAAAAGTTCGGTTTTGTGGTACCCGAATCTTTTAATGAAATCAATTCTAGTGACAGGGTTATGGAGAAGAAATCAAACATATCACTAAGCACTGTGCTCTTTTTTTGCCCACTCAATTATTATTTATTATAATAAACTAGGAACTTAGTAGATAACGAAGTGTACATATATTTAAAAAGAAAAAGAAAAGAAAAAGGGGGAGGGAATCCAAGCTTCAAGCTGTGTAAGATTGCGTAAAACTCTTCTATTGCCACATGGATCATTTACACTATAGTTGCTTAAGGGGACATTATAATTTACACATGAGATAGCTGCAAAAGACAATCTGTTAAGAAAAGTATTGAAACGCTTCTCTATGCTGTTGATGTTCTGTTATTTGTTTGTAGCCAAAGATTCCCCCCAAATACTCGAAGCTATAGGAAGAATATTTATACCTGGTGAATGGGTGAACTGTCATGACAAATGGAAAACCTTTCTATTAGATGGGAGAGCTGTATGAAATAGGGAATCTTCTTTTCCATTTTTCCCTGTGCTTTTG

mRNA sequence

AATCCGTTTGTAAAAAGGTGCGGAGAGCGATAAATATCTCAAATTTAGGGTTTTTGTTGGTGAAACGAATCCGGAGGTTGAAGACGATGGCGAAATTCAATGTAGTTCAGAAGCAAAGACGGGCTGTTAGAGCTCAGATAAAGAGAGACGCCCATGGTGATCCTTTGACCAAGAAGCTCAAGATCAAGCAACAGCCTACTTATGTATCCAACAAGCGTAAGCGCAAATTGATGAAGAAAAAACGCAGAGAAGAGAAGGAAGCTTTACAGATGGGTCTCACGAACATGGAAGATGTTGAAATGGCTGTTGCTGAAGCCAAAGATTCCCCCCAAATACTCGAAGCTATAGGAAGAATATTTATACCTGGTGAATGGGTGAACTGTCATGACAAATGGAAAACCTTTCTATTAGATGGGAGAGCTGTATGAAATAGGGAATCTTCTTTTCCATTTTTCCCTGTGCTTTTG

Coding sequence (CDS)

ATGGCGAAATTCAATGTAGTTCAGAAGCAAAGACGGGCTGTTAGAGCTCAGATAAAGAGAGACGCCCATGGTGATCCTTTGACCAAGAAGCTCAAGATCAAGCAACAGCCTACTTATGTATCCAACAAGCGTAAGCGCAAATTGATGAAGAAAAAACGCAGAGAAGAGAAGGAAGCTTTACAGATGGGTCTCACGAACATGGAAGATGTTGAAATGGCTGTTGCTGAAGCCAAAGATTCCCCCCAAATACTCGAAGCTATAGGAAGAATATTTATACCTGGTGAATGGGTGAACTGTCATGACAAATGGAAAACCTTTCTATTAGATGGGAGAGCTGTATGA

Protein sequence

MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEALQMGLTNMEDVEMAVAEAKDSPQILEAIGRIFIPGEWVNCHDKWKTFLLDGRAV*
Homology
[Close]
BLAST of MELO3C006770T2 vs. TrEMBL
Match: A0A0A0L881_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171810 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1 

Query: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA +AQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLTNMEDVEMAVAE 77
          QMGLTNMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]
BLAST of MELO3C006770T2 vs. TrEMBL
Match: C6T235_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-21
Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 1 

Query: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
          MAKFNVVQK+RRA+ A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1  MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61 QMGLTNMEDVEMAVAEA---KDSPQ 83
          Q GL  MEDV+MAVAEA   KD+P+
Sbjct: 61 QNGLVTMEDVQMAVAEAGDTKDTPR 85

[Close]
BLAST of MELO3C006770T2 vs. TrEMBL
Match: A0A0B2R183_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_022199 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.6e-21
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 1 

Query: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
          MAKFNVVQK+RRA+ A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1  MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61 QMGLTNMEDVEMAVAE--AKDSPQ 83
          Q GL  MEDV+MAVAE   KD+P+
Sbjct: 61 QNGLVTMEDVQMAVAEGDTKDTPR 84

[Close]
BLAST of MELO3C006770T2 vs. TrEMBL
Match: A0A0B2QIW9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_037209 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.6e-21
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 1 

Query: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
          MAKFNVVQK+RRA+ A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1  MAKFNVVQKKRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61 QMGLTNMEDVEMAVAE--AKDSPQ 83
          Q GL  MEDV+MAVAE   KD+P+
Sbjct: 61 QNGLVTMEDVQMAVAEGDTKDAPR 84

[Close]
BLAST of MELO3C006770T2 vs. TrEMBL
Match: I1N5M8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G000800 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.6e-21
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 1 

Query: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
          MAKFNVVQK+RRA+ A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1  MAKFNVVQKKRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61 QMGLTNMEDVEMAVAE--AKDSPQ 83
          Q GL  MEDV+MAVAE   KD+P+
Sbjct: 61 QNGLVTMEDVQMAVAEGDTKDAPR 84

[Close]
BLAST of MELO3C006770T2 vs. TAIR10
Match: AT1G08580.1 (AT1G08580.1 unknown protein)

HSP 1 Score: 83.6 bits (205), Expect = 8.8e-17
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 1 

Query: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
          MAK+N + K++R  +A  KR  HGDPLT KLK +     VS KR+RKL++K RRE+K+ +
Sbjct: 1  MAKYNEIAKKKREAKADRKRAIHGDPLTNKLKTRTPVPSVSGKRQRKLLRKWRREQKDMV 60

Query: 61 QMGLTNMEDVEMAVAEA 78
          + GL  MEDVEMA A+A
Sbjct: 61 EKGLVTMEDVEMASAQA 77

[Close]
BLAST of MELO3C006770T2 vs. NCBI nr
Match: gi|659077101|ref|XP_008439033.1| (PREDICTED: uncharacterized protein LOC103483941 isoform X2 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 6.3e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 1   MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
           MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL
Sbjct: 1   MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61  QMGLTNMEDVEMAVAEAKDSPQILEAIGRIFIPGEWVNCHDKWKTFLLDGRAV 114
           QMGLTNMEDVEMAVAEAKDSPQILEAIGRIFIPGEWVNCHDKWKTFLLDGRAV
Sbjct: 61  QMGLTNMEDVEMAVAEAKDSPQILEAIGRIFIPGEWVNCHDKWKTFLLDGRAV 113

[Close]
BLAST of MELO3C006770T2 vs. NCBI nr
Match: gi|449459816|ref|XP_004147642.1| (PREDICTED: uncharacterized protein LOC101207928 isoform X1 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 1.9e-53
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 1 

Query: 1   MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
           MAKFNVVQKQRRA +AQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL
Sbjct: 1   MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61  QMGLTNMEDVEMAVAEAKDSPQILEAIGRIFIPGEWVNCHDKWKTFLLDGRAV 114
           QMGLTNMEDVEMAVAEAKDSPQILE+IGRIFI GEW+ CHDKW+TFLLDGRAV
Sbjct: 61  QMGLTNMEDVEMAVAEAKDSPQILESIGRIFISGEWLTCHDKWRTFLLDGRAV 113

[Close]
BLAST of MELO3C006770T2 vs. NCBI nr
Match: gi|659077099|ref|XP_008439032.1| (PREDICTED: uncharacterized protein LOC103483941 isoform X1 [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-33
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLTNMEDVEMAVAE 77
          QMGLTNMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]
BLAST of MELO3C006770T2 vs. NCBI nr
Match: gi|449459818|ref|XP_004147643.1| (PREDICTED: uncharacterized protein LOC101207928 isoform X2 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1 

Query: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA +AQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLTNMEDVEMAVAE 77
          QMGLTNMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]
BLAST of MELO3C006770T2 vs. NCBI nr
Match: gi|351724235|ref|NP_001236027.1| (uncharacterized protein LOC100500554 [Glycine max])

HSP 1 Score: 109.4 bits (272), Expect = 4.2e-21
Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 1 

Query: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60
          MAKFNVVQK+RRA+ A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1  MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61 QMGLTNMEDVEMAVAEA---KDSPQ 83
          Q GL  MEDV+MAVAEA   KD+P+
Sbjct: 61 QNGLVTMEDVQMAVAEAGDTKDTPR 85

The following BLAST results are available for this feature:
BLAST of MELO3C006770T2 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L881_CUCSA1.3e-3297.37Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171810 PE=4 SV=1[more]
C6T235_SOYBN3.0e-2168.24Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=2 SV=1[more]
A0A0B2R183_GLYSO6.6e-2167.86Uncharacterized protein OS=Glycine soja GN=glysoja_022199 PE=4 SV=1[more]
A0A0B2QIW9_GLYSO6.6e-2167.86Uncharacterized protein OS=Glycine soja GN=glysoja_037209 PE=4 SV=1[more]
I1N5M8_SOYBN6.6e-2167.86Uncharacterized protein OS=Glycine max GN=GLYMA_19G000800 PE=4 SV=1[more]
BLAST of MELO3C006770T2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08580.18.8e-1753.25 unknown protein[more]
BLAST of MELO3C006770T2 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077101|ref|XP_008439033.1|6.3e-57100.00PREDICTED: uncharacterized protein LOC103483941 isoform X2 [Cucumis melo][more]
gi|449459816|ref|XP_004147642.1|1.9e-5393.81PREDICTED: uncharacterized protein LOC101207928 isoform X1 [Cucumis sativus][more]
gi|659077099|ref|XP_008439032.1|2.8e-33100.00PREDICTED: uncharacterized protein LOC103483941 isoform X1 [Cucumis melo][more]
gi|449459818|ref|XP_004147643.1|1.8e-3297.37PREDICTED: uncharacterized protein LOC101207928 isoform X2 [Cucumis sativus][more]
gi|351724235|ref|NP_001236027.1|4.2e-2168.24uncharacterized protein LOC100500554 [Glycine max][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C006770MELO3C006770gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C006770T2MELO3C006770T2-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006770T2.cds3MELO3C006770T2.cds3CDS
MELO3C006770T2.cds2MELO3C006770T2.cds2CDS
MELO3C006770T2.cds1MELO3C006770T2.cds1CDS


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36709FAMILY NOT NAMEDcoord: 1..77
score: 1.1