MELO3C006649T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006649T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4798757 .. 4800321 (-)
Sequence length	1565

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTACTTTGCCCTTCGCCGACGCTCCGCCGCCGCCCTTCCTTCTCCTCAACAAGGAACCAACAGCTCGCTCTTCCTTCTCCTCCCAGTTCTTAACTTACAGTCATGTCTAACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCAGCCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATTTTTGAGATACTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGCTGTTCAGCTCAAGAATAATCCGAAGGCTCTTGTTGCGTTACTTGCGAATCATGGATTCTCTGAATCGCAAATCTCTGACATTACCAAGAGGCAGTCTAAAATTCTCTGTCTGAACCCCGAGAAAATCCTATCACCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATCGTCAAATTAGTGTGTTCAATTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCTAATTTTGATTACCTTCAAGCCGTGTTTGGAAGTGAGGAGAAGACTCTCATTACCATAAAGCGGTTTGCGGGTATTCTCGCTTGGGATCTTCGAATTTCAGTTGGTCCCAATATCGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTCAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATCCCGTCCGATTCAAGGAGGCTGTAGAGAGAGTTAAGGAAATGGGATTCAACCCTCAGCAATTGCAGTTTGTTGTTGCTGTTTTTATTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTATAGCTTTTAGAAAGAGTCCTTTGTGTATGGCATTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAATTGGGATGCGAATCATCTTTCGCTGCTAGAAGACCGATTTTACTTTCACTTAGCTTGAAGAAGAGGATTTTGCCTAGAGGCTATATTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACACGAGAATCTTGCTTGGTTCTTTGAGTCTCCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATACAGAGCAGATTTCTGGATTGTTGGAGTTGTATGAAGAGAAATTAAAGGATTATAGAAGATGAACAGGTTCCATCTCCTTGAAATTATAATATTTAACTGTTTTTTTTCTTTTTTTGTTAGTTGATATGAGTAGTGACAACTAAAATTTAAGGATCGACTTGGTATCTTTTTCCTCTCTCTCTTTTGGTTCACCCTTAGTTTGTATCTTCTTTTATGGCTTCTGCATTTGTGTTGTGTTAAAGATAAATATAAATTTTTTGAGATCACATCCTTCTTTAATTTATGCTTTACAAGGGCGAACAATTCTTTTTAGAAAAAAAACTTTGATAGGTTTTCAGTAAAAGATGGGTTATAACTTATAAGGCAAGAAATTTAGGACTTCTTCAAAACTAGAAATCTAACTTTTACCAAATGGTTTTACAGTG

mRNA sequence

CTCTACTTTGCCCTTCGCCGACGCTCCGCCGCCGCCCTTCCTTCTCCTCAACAAGGAACCAACAGCTCGCTCTTCCTTCTCCTCCCAGTTCTTAACTTACAGTCATGTCTAACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCAGCCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATTTTTGAGATACTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGCTGTTCAGCTCAAGAATAATCCGAAGGCTCTTGTTGCGTTACTTGCGAATCATGGATTCTCTGAATCGCAAATCTCTGACATTACCAAGAGGCAGTCTAAAATTCTCTGTCTGAACCCCGAGAAAATCCTATCACCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATCGTCAAATTAGTGTGTTCAATTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCTAATTTTGATTACCTTCAAGCCGTGTTTGGAAGTGAGGAGAAGACTCTCATTACCATAAAGCGGTTTGCGGGTATTCTCGCTTGGGATCTTCGAATTTCAGTTGGTCCCAATATCGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTCAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATCCCGTCCGATTCAAGGAGGCTGTAGAGAGAGTTAAGGAAATGGGATTCAACCCTCAGCAATTGCAGTTTGTTGTTGCTGTTTTTATTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTATAGCTTTTAGAAAGAGTCCTTTGTGTATGGCATTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAATTGGGATGCGAATCATCTTTCGCTGCTAGAAGACCGATTTTACTTTCACTTAGCTTGAAGAAGAGGATTTTGCCTAGAGGCTATATTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACACGAGAATCTTGCTTGGTTCTTTGAGTCTCCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATACAGAGCAGATTTCTGGATTGTTGGAGTTGTATGAAGAGAAATTAAAGGATTATAGAAGATGAACAGGTTCCATCTCCTTGAAATTATAATATTTAACTGTTTTTTTTCTTTTTTTGTTAGTTGATATGAGTAGTGACAACTAAAATTTAAGGATCGACTTGGTATCTTTTTCCTCTCTCTCTTTTGGTTCACCCTTAGTTTGTATCTTCTTTTATGGCTTCTGCATTTGTGTTGTGTTAAAGATAAATATAAATTTTTTGAGATCACATCCTTCTTTAATTTATGCTTTACAAGGGCGAACAATTCTTTTTAGAAAAAAAACTTTGATAGGTTTTCAGTAAAAGATGGGTTATAACTTATAAGGCAAGAAATTTAGGACTTCTTCAAAACTAGAAATCTAACTTTTACCAAATGGTTTTACAGTG

Coding sequence (CDS)

ATGTCTAACTTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGTCAGCCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATTTTTGAGATACTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGCTGTTCAGCTCAAGAATAATCCGAAGGCTCTTGTTGCGTTACTTGCGAATCATGGATTCTCTGAATCGCAAATCTCTGACATTACCAAGAGGCAGTCTAAAATTCTCTGTCTGAACCCCGAGAAAATCCTATCACCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATCGTCAAATTAGTGTGTTCAATTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCTAATTTTGATTACCTTCAAGCCGTGTTTGGAAGTGAGGAGAAGACTCTCATTACCATAAAGCGGTTTGCGGGTATTCTCGCTTGGGATCTTCGAATTTCAGTTGGTCCCAATATCGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTCAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATCCCGTCCGATTCAAGGAGGCTGTAGAGAGAGTTAAGGAAATGGGATTCAACCCTCAGCAATTGCAGTTTGTTGTTGCTGTTTTTATTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTATAGCTTTTAGAAAGAGTCCTTTGTGTATGGCATTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACAAATTGGGATGCGAATCATCTTTCGCTGCTAGAAGACCGATTTTACTTTCACTTAGCTTGAAGAAGAGGATTTTGCCTAGAGGCTATATTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACACGAGAATCTTGCTTGGTTCTTTGAGTCTCCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATACAGAGCAGATTTCTGGATTGTTGGAGTTGTATGAAGAGAAATTAAAGGATTATAGAAGATGA

Protein sequence

MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR*

Homology

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BLAST of MELO3C006649T1 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 8.2e-81
Identity = 158/321 (49.22%), Postives = 217/321 (67.60%), Query Frame = 1


Query: 42  SPKSASLASN--AVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKL 101
           S K A  AS   + +  + P +++A   +HGFS+SQIS I K   ++L  +P+K L PKL
Sbjct: 61  SHKDALSASKFFSFETPDKPNSVLAFFNSHGFSKSQISKIVKSLPRLLASDPDKTLLPKL 120

Query: 102 LFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGIL 161
            FF SKG S P++ K+V S P +L  SL  +IIP+F++ +    S+E  +  IKRF+ IL
Sbjct: 121 QFFYSKGASRPDVAKIVVSTPGILYRSLENQIIPSFNFFKDFLQSDEMAITVIKRFSRIL 180

Query: 162 AWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQL 221
            +DL   V  NI  L++ GVP SNI   L  +P  F++ P  F+E +E VK+MGFNP Q+
Sbjct: 181 LFDLHTYVASNINALQEFGVPKSNIAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQM 240

Query: 222 QFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFV 281
           +FV+A+  +RAM KSTW++K++ Y++WG SEEEIR+AF K P CM  SEDKI   MDFFV
Sbjct: 241 KFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFV 300

Query: 282 NKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIE 341
           NK+G ESS  ARRP+L+ LSL+KRI+PR  + QVLLSKGLIK   +L   FES EK F+ 
Sbjct: 301 NKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQVLLSKGLIKNDTSLVVLFESTEKMFLR 360

Query: 342 KFINPHTEQISGLLELYEEKL 361
           KF+N   E+   L++LY+EK+
Sbjct: 361 KFVNGFKEEAPQLMKLYQEKI 381

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BLAST of MELO3C006649T1 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.0e-79
Identity = 157/321 (48.91%), Postives = 216/321 (67.29%), Query Frame = 1


Query: 42  SPKSASLASNAVQLKN--NPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKL 101
           S K+A  AS  +  K    P ++ A   +HGFSESQ S I + Q ++L  +P+K L  KL
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGIL 161
            FF SKG S+P++VK++ S P +L  SL  +IIP+F++ +  F SEE T+ T+KRF+ +L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 AWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQL 221
             +  I V  NI  L++ GVP SNI   L  QPR F++ P  F+E +E VK+MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFV 281
           +F  AV  +  M+KSTW++K++ Y++WG SEE+I +AF KSP CM +SEDKI   MDFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIE 341
           NK+G ESS  A RP L+ LSL+KRI+PR  + QVLLSKGLI K  +L   FES EK F+E
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KFINPHTEQISGLLELYEEKL 361
           KF+N + E+   LL LY+EK+
Sbjct: 360 KFVNGYKEEAPQLLNLYQEKV 380

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BLAST of MELO3C006649T1 vs. TrEMBL
Match: A5C3Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-78
Identity = 149/321 (46.42%), Postives = 219/321 (68.22%), Query Frame = 1


Query: 42  SPKSASLASNAVQLK--NNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKL 101
           S K A  AS  +  +    P +++A   +HGFS++Q S I K + ++L  +P+K L PKL
Sbjct: 64  SHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKL 123

Query: 102 LFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGIL 161
            FF SKG S P++ K+V S P ++  SL  ++IP++++ +    S++  +  +KRF+ IL
Sbjct: 124 QFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRIL 183

Query: 162 AWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQL 221
            +D+   V  N+  L++ GVP SNI   L+ QP  F++ P  F+E +E VK+MGFNP Q+
Sbjct: 184 LFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQM 243

Query: 222 QFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFV 281
           +FV+AV  +RA  KS+W++K+++Y+ WG SEEEIR+AF KSP CM +SEDKI   MDFFV
Sbjct: 244 KFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFV 303

Query: 282 NKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIE 341
           NK+G ESS  ARRP+L+S SL+KRI+PR  + QVLLSKGLI K  +L   F+S EK F+ 
Sbjct: 304 NKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLH 363

Query: 342 KFINPHTEQISGLLELYEEKL 361
           KF+N + E+   L++LY+EK+
Sbjct: 364 KFVNVYKEEAPQLMKLYQEKI 384

[Close]

BLAST of MELO3C006649T1 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.9e-78
Identity = 152/316 (48.10%), Postives = 215/316 (68.04%), Query Frame = 1


Query: 42  SPKSASLASNAVQLKN--NPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKL 101
           S K A  AS  ++ +    P +++A   +HGFS+SQ S I K   ++L  +P+K L PKL
Sbjct: 67  SHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGIL 161
            FF SKG S P++ K+V S P +L  SL  +IIP+F++L+    S+E  +  +KRF+ IL
Sbjct: 127 QFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRIL 186

Query: 162 AWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQL 221
            +DL   V  N+  L++ GVP SNI   L Y+P  F++NP  F++ +E VK+MGFNP Q+
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQM 246

Query: 222 QFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFV 281
           +FV+A+  +RA  +S W++K+++Y+KWG SEEEIR+AF KSP CM +SEDKI   MDFFV
Sbjct: 247 KFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFV 306

Query: 282 NKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIE 341
           NK+G ESS  A RP L+ LSL+KRI+PR  + QVLLSKGLI K  +L   FES EK F+E
Sbjct: 307 NKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLE 366

Query: 342 KFINPHTEQISGLLEL 356
           +F+N + E+   L++L
Sbjct: 367 RFVNAYKEEAPQLIKL 382

[Close]

BLAST of MELO3C006649T1 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 5.5e-77
Identity = 163/356 (45.79%), Postives = 233/356 (65.45%), Query Frame = 1


Query: 9   LLLRSPSSAFSHGFSECPLKF-LRYLSTSSEIVSSPKSASLASNAVQLK--NNPKALVAL 68
           L L S SS+ S   SE P  F + YL  S  +  S K A  AS  V  +  + P +++AL
Sbjct: 416 LYLFSSSSSTSISTSEKPHPFTVSYLINSCGL--SHKDARSASKYVHFETPDKPNSVLAL 475

Query: 69  LANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTG 128
             +HGFS++Q S I K++ ++L  +P+K L PKL FF SKG S P+I K+V   P +L  
Sbjct: 476 FNSHGFSKTQTSKIVKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVCSPSILKR 535

Query: 129 SLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIF 188
           SL  +IIP+F++ +    S++  +  +KRF+ IL +DL   V  N+  L++ GVP SNI 
Sbjct: 536 SLENQIIPSFNFFKDFLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIA 595

Query: 189 KYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRK 248
             L  QP  F++ P  F+E +E VK+MG NP Q++FV+A+  +RA  KS+W++K+++Y++
Sbjct: 596 GLLMNQPMAFMVRPNLFRENLEEVKKMGSNPSQMKFVIAIQAIRAGGKSSWERKIDIYKR 655

Query: 249 WGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRIL 308
           WG SEEEIR+AF KSP CM +SEDKI   MDFFVNK+G ESS  ARRP L+S SL+KRI+
Sbjct: 656 WGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRII 715

Query: 309 PRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLK 362
           PR  + QVLLSKGLI K  +L+  F+S E  F+ KF++ + E+   LL L  +++K
Sbjct: 716 PRYSVVQVLLSKGLISKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLEHKEMK 769

HSP 2 Score: 299.7 bits (766), Expect = 5.0e-78
Identity = 163/349 (46.70%), Postives = 230/349 (65.90%), Query Frame = 1


Query: 15  SSAFSHGFSECPLKF-LRYLSTSSEIVSSPKSASLASNAVQLKN--NPKALVALLANHGF 74
           SS+ S   SE P  F + YL  S  +  S K A  AS  V  ++   P +++AL  +HGF
Sbjct: 41  SSSTSISTSEKPHPFTVSYLINSCGL--SHKDARSASKYVHFESPDKPNSVLALFNSHGF 100

Query: 75  SESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRI 134
           S++Q S I K++ ++L  +P+K L PKL FF SKG S P+I K+V   P +L  SL  +I
Sbjct: 101 SKTQTSKIXKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVCSPSILKRSLENQI 160

Query: 135 IPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQ 194
           IP+F++ +    S++  +  +KRF+ IL +DL   V  N+  L++ GVP SNI   L  Q
Sbjct: 161 IPSFNFFKDXLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMNQ 220

Query: 195 PRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEE 254
           P  F++ P  F+E +E VK MGFNP Q++FV+A+  +RA  K +W++K+++Y++WG SEE
Sbjct: 221 PMAFMVRPNLFRENLEEVKXMGFNPSQMKFVIAIQAIRAGGKXSWERKIDIYKRWGWSEE 280

Query: 255 EIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIY 314
           EIR+AF KSP CM +SEDKI   MDFFVNK+G ESS  ARRP L+S SL+KRI+PR  + 
Sbjct: 281 EIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPRYSVV 340

Query: 315 QVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 361
           QVLLSKGLI K  +L+  F+S E  F+ KF++ + E+   LL LY+EKL
Sbjct: 341 QVLLSKGLINKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLYQEKL 387

[Close]

BLAST of MELO3C006649T1 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 219.5 bits (558), Expect = 3.3e-57
Identity = 123/330 (37.27%), Postives = 196/330 (59.39%), Query Frame = 1


Query: 30  LRYLSTSSEIVSSPKSASLASNAVQLKN--NPKALVALLANHGFSESQISDITKRQSKIL 89
           L YL  S  +  SP SA++AS  + L +   P  ++ LL +HGF+ +QIS + K++  +L
Sbjct: 72  LNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLL 131

Query: 90  CLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEK 149
             N E +L PKL FF S G+S   + + + S P +LT SL  ++IP++++L++V  S+EK
Sbjct: 132 LANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEK 191

Query: 150 TLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVE 209
            +  ++R   +   D   ++ PNI  + + GVP+  I   L + P   +     F+   +
Sbjct: 192 IVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAK 251

Query: 210 RVKEMGFNPQQLQFVVAVFILRAM-TKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAF 269
           + +EMGFNPQ+  FV+A+  L     KS WDK  EVY++WG SE++I  AF+K P CM  
Sbjct: 252 QAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMML 311

Query: 270 SEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHENL 329
           SE KIN  M++FVN++       A+ P++L  SL+KRI+PR  + +VL+S GL+K+  +L
Sbjct: 312 SERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSL 371

Query: 330 AWFFESPEKRFIEKFINPHTEQISGLLELY 357
                  EK F+EK +  + E++  L+ LY
Sbjct: 372 TSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of MELO3C006649T1 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 193.0 bits (489), Expect = 3.3e-49
Identity = 107/318 (33.65%), Postives = 190/318 (59.75%), Query Frame = 1


Query: 42  SPKSASLASNAVQLKNN--PKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKL 101
           S +SA   S  V+L ++  P +++AL  +HGF+  QI+ + K   ++L L+PE ++SPKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGIL 161
           +FF S G S+ +  K++ S P +L+ SL+KR+IP +D L+++   EE  +  +KR  GI 
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIR 188

Query: 162 AWDLRIS--VGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQ 221
            + L+I+  V   + I +++GVPD +I   +Q  P  F     RF E + RV   GF+P+
Sbjct: 189 CFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPK 248

Query: 222 QLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDF 281
           +  FV A+      ++S  ++K ++++ +G S+E+   A  + P C+  S++KI   +++
Sbjct: 249 KAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEY 308

Query: 282 FVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHE-NLAWFFESPEKR 341
            VN +G ++     RP++LSLS++KRI PR  +  +LLSKGL+KK + N     +     
Sbjct: 309 LVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSE 368

Query: 342 FIEKFINPHTEQISGLLE 355
           F++KF+  + +++  L++
Sbjct: 369 FMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of MELO3C006649T1 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 164.9 bits (416), Expect = 9.6e-41
Identity = 97/316 (30.70%), Postives = 175/316 (55.38%), Query Frame = 1


Query: 43  PKSASLASNAVQLKN--NPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLL 102
           P + ++A     LK+   P++++ +L ++ FS++QI    +   +++  N EKIL PKL 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAG--I 162
           FF+  G +   + K V     V+  SL K++IP  + L+++   + + L  I    G  +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQ 222
           L+ D  + + PNI  L+  G+  S +   L+ QPR+F ++  + +  V R  ++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 LQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFF 282
              V AV  L ++++ T+D+KV+++   G SE+EI    R+SP  +  SEDK+    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLI----KKHENLAWFFESPE 342
           + ++G E    A+RP +LS +L+KR++PR  + Q+L  KGL+    KK +N+    E  E
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

Query: 343 KRFIEKFINPHTEQIS 351
           + F+EK++    ++I+
Sbjct: 353 EAFLEKYVVRFGDEIA 368

[Close]

BLAST of MELO3C006649T1 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-28
Identity = 72/218 (33.03%), Postives = 127/218 (58.26%), Query Frame = 1


Query: 56  KNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKL 115
           K NP +++ LL ++GF +SQIS I +   ++L  + EK L PKL F +S+G SS E++++
Sbjct: 81  KVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEI 140

Query: 116 VCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILK 175
           V ++P +L     + +   +D+++ +    +   I+     G     +R     NI +L+
Sbjct: 141 VSNVPTILDKKGEESVSLYYDFVKDIMQDGKSLCISCPE--GKKGNRIR-----NISVLR 200

Query: 176 QIGVPDSNIFKYL--QYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTK 235
           ++GVP   +F  L  +YQP   +    +F+E++++V +MGF+P + +FV A+ ++  M++
Sbjct: 201 ELGVPQKLLFSLLISRYQP---VCGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSE 260

Query: 236 STWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKI 272
            T ++KV VY++ G SE EI   F+K P  + FSE KI
Sbjct: 261 KTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288

HSP 2 Score: 60.1 bits (144), Expect = 3.3e-09
Identity = 36/196 (18.37%), Postives = 92/196 (46.94%), Query Frame = 1


Query: 166 SVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAV 225
           ++   + + K++G  ++ I+   +  P     +  +     E +K+ G   ++   +++V
Sbjct: 252 TIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEE---IISV 311

Query: 226 FILRAMTKSTWDKKV----EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNK 285
              R     + ++K+    E++   G S ++ ++  ++ P C A+S + +    +  V  
Sbjct: 312 LKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKM 371

Query: 286 LGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLI-KKHENLAWFFESPEKRFIEK 345
           +          P +L  SL+KRI+PR  + + L+SKGLI  ++  ++      ++ F+++
Sbjct: 372 MNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKR 431

Query: 346 FINPHTEQISGLLELY 357
           ++  H + +  L+ ++
Sbjct: 432 YVMKHDKLVPKLMAIF 444

[Close]

BLAST of MELO3C006649T1 vs. TAIR10
Match: AT5G23930.1 (AT5G23930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-26
Identity = 82/283 (28.98%), Postives = 142/283 (50.18%), Query Frame = 1


Query: 5   FRRILLLRSPSSAFSHGFSECPL---------KFLRYLSTSSEIVSS-------PKSASL 64
           +R + LL   SSAF+  FS             +  R   T S ++ S        +S S+
Sbjct: 18  WRNLNLLLQNSSAFTESFSSVVTTTKDLSLEDERKRKTFTVSYLIDSLGLTTKLAESISM 77

Query: 65  ASNAVQLKNNPKALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLS 124
            +N  + K NP +++ LL ++GF +SQIS I     + L  NPEK L  KL F +  G S
Sbjct: 78  KANFDE-KGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGAS 137

Query: 125 SPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVG 184
           S E+ ++V  +P +L     K I   +DY++ +   ++ +  + KR         + +  
Sbjct: 138 SSELTEIVSKVPKILGKRGGKWISHYYDYVKEILQDQDSSSSSSKR--------KQTNRN 197

Query: 185 PNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFIL 244
            N+ +L+++GVP   +   L  + +  +    RF+E+V+++ EMGF+P+  +FV A+++ 
Sbjct: 198 RNVSVLRKLGVPQRLLLNLLISRAKP-VCGKERFEESVKKIVEMGFDPKSPKFVNALYVF 257

Query: 245 RAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMAFSEDKI 272
             ++  T ++KV  Y + GLS  E+   F+K P  + +SE  I
Sbjct: 258 YELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNI 290

HSP 2 Score: 67.4 bits (163), Expect = 2.1e-11
Identity = 37/151 (24.50%), Postives = 75/151 (49.67%), Query Frame = 1


Query: 207 ERVKEMGFNPQQLQFVVAVFILRAMT-KSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCMA 266
           E +K +G   +++  VV  +     T +    K V+ + + G +++E+ +  ++ P C+ 
Sbjct: 295 ETLKRVGLTKEEVCLVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKRHPQCIG 354

Query: 267 FSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHEN 326
            + D +    +F V  +G      A  PI+L  SL+K +LPR  + + L+S GLI +   
Sbjct: 355 LAADSVKKKTEFLVKTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLIGEMPA 414

Query: 327 LAWFFESPEKRFIEKFINPHTEQISGLLELY 357
           ++    SP+ +F++ F+  H + +  L  ++
Sbjct: 415 ISSVLTSPKLKFLKLFVEKHQDVLPELNSIF 445

[Close]

BLAST of MELO3C006649T1 vs. NCBI nr
Match: gi|659077777|ref|XP_008439380.1| (PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo])

HSP 1 Score: 585.1 bits (1507), Expect = 8.5e-164
Identity = 302/365 (82.74%), Postives = 322/365 (88.22%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60
           M NLFRR +LLR  SS FSHGFSECPLK LRYLSTSS+IVSSP SA LASNA+QLKN  K
Sbjct: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRK 60

Query: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120
           A++ALLA+HGFSESQISD+ KR  +IL  NPEK L PKLLFFQSKGLSSPEIVKLVCS P
Sbjct: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180
            VLTGSL+KRIIP FDY+QAV GSEEKTL +IK+FAGIL  DLRIS GPNIEILKQIGVP
Sbjct: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNIFKYLQYQPRVFLINPVRFKE VERV EMGFNPQQLQFVVAVFILRAMTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300
           EVYRKWGLSEEEI +AFR+ P  M  SEDKING MDFFVNK+GCE+SFAARRPILLSLSL
Sbjct: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360
           KKRILPRGY+YQVLLSKGLIKKH+NL  FFES E  FIEKFINPH EQI GLLELY++KL
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKL 360

Query: 361 KDYRR 366
            D RR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006649T1 vs. NCBI nr
Match: gi|659076746|ref|XP_008438846.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X9 [Cucumis melo])

HSP 1 Score: 576.2 bits (1484), Expect = 3.9e-161
Identity = 293/365 (80.27%), Postives = 316/365 (86.58%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60
           MSNLFRRILLLRSPSS FSHGFSECPLK LR+LSTSSEIVSSPKSASLASN VQ+KNN K
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120
           A  +   NHGFSESQISDI K+  +IL  NPEKIL PKLLFFQSKGLSSPEIVKLVC  P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCLYP 120

Query: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180
             L  SLNKR+IP FDY+QAVFGS+EK L  IK+FAGIL +DL+I VGPNIEILKQIGVP
Sbjct: 121 WALRASLNKRMIPAFDYIQAVFGSKEKALAAIKQFAGILCFDLKILVGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNIFKYLQY+PRVFL NP+RFKE VER  EMGFNPQQLQF+VAVFILR+M KSTWDKKV
Sbjct: 181 DSNIFKYLQYEPRVFLTNPIRFKEIVERAMEMGFNPQQLQFLVAVFILRSMAKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300
           EVYRKWGLSEEEIR+AFRK P  M  SEDKIN  MDFFVNK+GCESS A  RP+LLSLSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKHPSSMMRSEDKINAAMDFFVNKMGCESSLAVTRPLLLSLSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360
           KKRILPRGY+Y+VLLSKGLI+KH+NL  FFESPEKRFIEK INPH EQI GLLELYE+KL
Sbjct: 301 KKRILPRGYVYKVLLSKGLIEKHKNLVLFFESPEKRFIEKIINPHEEQIPGLLELYEQKL 360

Query: 361 KDYRR 366
            D RR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006649T1 vs. NCBI nr
Match: gi|659076720|ref|XP_008438832.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo])

HSP 1 Score: 569.3 bits (1466), Expect = 4.8e-159
Identity = 290/365 (79.45%), Postives = 317/365 (86.85%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60
           M NLFRRILLLRSPSS FSHGFSE PLK LRYLSTSSEIVSSPKSASLASN VQLKNN K
Sbjct: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60

Query: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120
           A++ALLANHGFS+SQISD+ KR  +IL  NPEKIL PKLLFF+SKGLSSPEI K+V S P
Sbjct: 61  AVIALLANHGFSQSQISDLAKRFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180
            VL+GSLN RIIP FDY+QAV GSEEKTL  IK FAGIL  DLRISVGPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNIFKYLQY+PRVFL NP+RFKE V+RV EMGFNPQQLQFVVAVFILR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300
           EVYRKWGLSEEEI +AF++ P CM  SEDKINGVMDFFVNK+GCESSF A RP+L+SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360
           KKRI PRGY+YQVLL+KGLIKKH ++  F +  EK FIEK I+PH EQI GLLE YE+KL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 KDYRR 366
            D RR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006649T1 vs. NCBI nr
Match: gi|659077781|ref|XP_008439382.1| (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 568.5 bits (1464), Expect = 8.2e-159
Identity = 293/366 (80.05%), Postives = 320/366 (87.43%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60
           MS LFRRILLLRSPSS FSHGFSE PLK LR+LSTSSEIVSSPKSASLASNAVQL+NN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120
           A++ LLANHGFS+SQISDI +R+ +IL  NPEKIL PKLLFFQSKGLSSPEI KLVC+ P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180
            VLTGSLNKRII NFDY+QAV GSEEKTL  IK+FAGILA DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNI KYLQYQPRVF+I+ +RFKE VERV EMGFNPQ+LQF+VAVF LRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300
           EVYRKWGLSEEEI +AF++ P CM  SEDKING MDFFVNK+GCESSF ARRP L+SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPH-TEQISGLLELYEEK 360
           KKR+ PRGY+YQVLL KGLIKK  N+  F  S EKRFIEKFINPH  EQI GLLELY++K
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LKDYRR 366
           L D RR
Sbjct: 361 LMDSRR 366

[Close]

BLAST of MELO3C006649T1 vs. NCBI nr
Match: gi|659076748|ref|XP_008438847.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X10 [Cucumis melo])

HSP 1 Score: 566.6 bits (1459), Expect = 3.1e-158
Identity = 287/365 (78.63%), Postives = 311/365 (85.21%), Query Frame = 1


Query: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60
           MSNLFRRILLLRSPSS FSHGFSECPLK LR+LSTSSEIVSSPKSASLASN VQ+KNN K
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120
           A  +   NHGFSESQISDI K+  +IL  NPEKIL PKLLFFQSKGLSSPEIVKLVC  P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCLYP 120

Query: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180
             L  SLNKR+IP FDY+QAVFGS+EK L  IK+FAGIL +DL+I VGPNIEILKQIGVP
Sbjct: 121 WALRASLNKRMIPAFDYIQAVFGSKEKALAAIKQFAGILCFDLKILVGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNIFKYLQY+PRVFL NP+RFKE VER  EMGFNPQQLQF+VAVFILR+M KSTWDKKV
Sbjct: 181 DSNIFKYLQYEPRVFLTNPIRFKEIVERAMEMGFNPQQLQFLVAVFILRSMAKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300
           EVYRKWGLSEEEIR+AFRK P CM  SEDKING MDFFVNK+GCESSF ARRP L+SLSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360
           KKR+ PRGY+YQVLL KGLIKK  N+  F  S E RFI+KFINPH E+I GLLE YE+KL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 KDYRR 366
            D RR
Sbjct: 361 MDSRR 365

The following BLAST results are available for this feature:

BLAST of MELO3C006649T1 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	8.2e-81	49.22	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
A5B1K5_VITVI	2.0e-79	48.91	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]
A5C3Y0_VITVI	1.3e-78	46.42	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1	[more]
F6HDG2_VITVI	2.9e-78	48.10	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	5.5e-77	45.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]

BLAST of MELO3C006649T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	3.3e-57	37.27	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	3.3e-49	33.65	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	9.6e-41	30.70	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	3.2e-28	33.03	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	1.8e-26	28.98	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006649T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077777\|ref\|XP_008439380.1\|	8.5e-164	82.74	PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo]	[more]
gi\|659076746\|ref\|XP_008438846.1\|	3.9e-161	80.27	PREDICTED: uncharacterized protein LOC103483819 isoform X9 [Cucumis melo]	[more]
gi\|659076720\|ref\|XP_008438832.1\|	4.8e-159	79.45	PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo]	[more]
gi\|659077781\|ref\|XP_008439382.1\|	8.2e-159	80.05	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]
gi\|659076748\|ref\|XP_008438847.1\|	3.1e-158	78.63	PREDICTED: uncharacterized protein LOC103483819 isoform X10 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006649	MELO3C006649	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006649T1	MELO3C006649T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006649T1.cds1	MELO3C006649T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..223 score: 8.3E-20coord: 233..337 score: 7.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 185..215 score: 390.0coord: 149..180 score: 2700.0coord: 286..320 score: 140.0coord: 113..145 score: 0.059coord: 77..108 score: 0.39coord: 254..285 score:
None	No IPR available	unknown	Coil	Coil	coord: 346..365 scor
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..361 score: 1.1E
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 42..361 score: 1.1E