MELO3C006640.2.1 (mRNA) Melon (DHL92) v3.6.1

NameMELO3C006640.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptiontranscription termination factor MTEF1, chloroplastic-like
Locationchr06 : 4749958 .. 4751070 (-)
Sequence length1113
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCTCAAATTCTTTCTGCGAACCCCGAGAAAACCCTATTGCCCAAACTGCTCTTTTTTCGATCAAAAGGTCTTTCTTCCCCAGAGATCGCCAAAATGGTATGTTCATTTCCTCGTGTCTTCATAGGAAGTTTAGACAAACGAATTATTCCTAATTTTAAATACATTCAAGCCATGCTTGGAAGTGAGGAGAAGACTCTCGTTGCCATAAAGCGCTTTGCGGGTATTCTCACTTGGGATCTTCGAATTTCAGCTGGTCCCAGTATTGAAATTCTGAAACAAAGTGGTGTGCCGGATTCAAATATTTTAAAATATCTTCAGTTCCAGCCTAGACTGTTCTTGACAAATCCCATCCGATTCAAGGAGAGTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTCTTGTTGCTGTGTTTGCTCTGCGTTCAATGACCAAATCTACGTGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGGTCCGTTTAGCATTTAGAAGGTATCCATGGTGTATGATAGCTTCTGAGGATAAGATTAATGATGTAATGGATTTTTTTGTCAACAAAATTGGATGCGAATCATCTTTCGCTGCTAGAAGACCAATTTTAATTTACCGTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAATCACAAGAATCTTGTTTTGTTCTTTGAGTCTCCCGAAAAGCCTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAAGAGAAATTAATGGATTCTAGAAGATGAACAGGTTCCATCTCCTTGAGATTTAACTGTTTTGTTAGTTGATATGTGTGGAGACAACTAAATTTTCTGTATGCGCAAGAGTTTGTGTTTCTACATTATCACTATTTAGATTGCTAACTGAATGATGATGACTCCTCCTTTAGAACTGCCTTTCCATGTATTTGGATATCGTTCCTTTCCTCAACATTGTTATATTATTTCAGCTCTTTATGATGGGAAATTTGGTACTTCCATCAGTTGCCACCTCCACATTTCATTTAAA

mRNA sequence

ATCCTCAAATTCTTTCTGCGAACCCCGAGAAAACCCTATTGCCCAAACTGCTCTTTTTTCGATCAAAAGGTCTTTCTTCCCCAGAGATCGCCAAAATGGTATGTTCATTTCCTCGTGTCTTCATAGGAAGTTTAGACAAACGAATTATTCCTAATTTTAAATACATTCAAGCCATGCTTGGAAGTGAGGAGAAGACTCTCGTTGCCATAAAGCGCTTTGCGGGTATTCTCACTTGGGATCTTCGAATTTCAGCTGGTCCCAGTATTGAAATTCTGAAACAAAGTGGTGTGCCGGATTCAAATATTTTAAAATATCTTCAGTTCCAGCCTAGACTGTTCTTGACAAATCCCATCCGATTCAAGGAGAGTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTCTTGTTGCTGTGTTTGCTCTGCGTTCAATGACCAAATCTACGTGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGGTCCGTTTAGCATTTAGAAGGTATCCATGGTGTATGATAGCTTCTGAGGATAAGATTAATGATGTAATGGATTTTTTTGTCAACAAAATTGGATGCGAATCATCTTTCGCTGCTAGAAGACCAATTTTAATTTACCGTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAATCACAAGAATCTTGTTTTGTTCTTTGAGTCTCCCGAAAAGCCTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAAGAGAAATTAATGGATTCTAGAAGATGAACAGGTTCCATCTCCTTGAGATTTAACTGTTTTGTTAGTTGATATGTGTGGAGACAACTAAATTTTCTGTATGCGCAAGAGTTTGTGTTTCTACATTATCACTATTTAGATTGCTAACTGAATGATGATGACTCCTCCTTTAGAACTGCCTTTCCATGTATTTGGATATCGTTCCTTTCCTCAACATTGTTATATTATTTCAGCTCTTTATGATGGGAAATTTGGTACTTCCATCAGTTGCCACCTCCACATTTCATTTAAA

Coding sequence (CDS)

CCTCAAATTCTTTCTGCGAACCCCGAGAAAACCCTATTGCCCAAACTGCTCTTTTTTCGATCAAAAGGTCTTTCTTCCCCAGAGATCGCCAAAATGGTATGTTCATTTCCTCGTGTCTTCATAGGAAGTTTAGACAAACGAATTATTCCTAATTTTAAATACATTCAAGCCATGCTTGGAAGTGAGGAGAAGACTCTCGTTGCCATAAAGCGCTTTGCGGGTATTCTCACTTGGGATCTTCGAATTTCAGCTGGTCCCAGTATTGAAATTCTGAAACAAAGTGGTGTGCCGGATTCAAATATTTTAAAATATCTTCAGTTCCAGCCTAGACTGTTCTTGACAAATCCCATCCGATTCAAGGAGAGTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTCTTGTTGCTGTGTTTGCTCTGCGTTCAATGACCAAATCTACGTGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGGTCCGTTTAGCATTTAGAAGGTATCCATGGTGTATGATAGCTTCTGAGGATAAGATTAATGATGTAATGGATTTTTTTGTCAACAAAATTGGATGCGAATCATCTTTCGCTGCTAGAAGACCAATTTTAATTTACCGTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAATCACAAGAATCTTGTTTTGTTCTTTGAGTCTCCCGAAAAGCCTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAAGAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR
BLAST of MELO3C006640.2.1 vs. NCBI nr
Match: XP_008439383.1 (PREDICTED: uncharacterized protein LOC103484198 [Cucumis melo])

HSP 1 Score: 506.9 bits (1304), Expect = 4.4e-140
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0

Query: 32  MVCSFPRVFIGSLDKRIIPNFKYIQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEIL 91
           MVCSFPRVFIGSLDKRIIPNFKYIQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEIL
Sbjct: 1   MVCSFPRVFIGSLDKRIIPNFKYIQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEIL 60

Query: 92  KQSGVPDSNILKYLQFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKS 151
           KQSGVPDSNILKYLQFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKS
Sbjct: 61  KQSGVPDSNILKYLQFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKS 120

Query: 152 TWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPI 211
           TWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPI
Sbjct: 121 TWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPI 180

Query: 212 LIYRSLKKRILPRGYVYQVLLSKGLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLE 271
           LIYRSLKKRILPRGYVYQVLLSKGLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLE
Sbjct: 181 LIYRSLKKRILPRGYVYQVLLSKGLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLE 240

Query: 272 LYEEKLMDSRR 283
           LYEEKLMDSRR
Sbjct: 241 LYEEKLMDSRR 251

BLAST of MELO3C006640.2.1 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 459.9 bits (1182), Expect = 6.2e-126
Identity = 225/281 (80.07%), Postives = 247/281 (87.90%), Query Frame = 0

Query: 2   QILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLGS 61
           +IL  NPEK L PKLLFF+SKGLSSPEI K+VCS P V  GSL+KRIIPNF Y+QA+ GS
Sbjct: 85  KILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGS 144

Query: 62  EEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFKE 121
           EEKTL+ IKRFAGIL WDLRIS GP+IEILKQ GVPDSNI KYLQ+QPR+FL NP+RFKE
Sbjct: 145 EEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKE 204

Query: 122 SVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWCM 181
           +VERV EMGFNPQQ+QF+VAVF LR+MTKSTWDKKVEVYRKWGLSEEE+R+AFR+ P CM
Sbjct: 205 AVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCM 264

Query: 182 IASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNHK 241
             SEDKIN VMDFFVNK+GCESSFAARRPIL+  SLKKRILPRGY+YQVLLSKGLIK H+
Sbjct: 265 AFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHE 324

Query: 242 NLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 283
           NL  FFESPEK FIEKFINPH EQI GLLELYEEKL D RR
Sbjct: 325 NLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR 365

BLAST of MELO3C006640.2.1 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 451.1 bits (1159), Expect = 2.9e-123
Identity = 226/283 (79.86%), Postives = 250/283 (88.34%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           PQIL+ANPEK LLPKLLFF+SKGLSSPEIAK+VC+FP V  GSL+KRII NF YIQA+LG
Sbjct: 84  PQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLG 143

Query: 61  SEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFK 120
           SEEKTL AIK+FAGIL  DL+IS GP+IEILKQ GVPDSNILKYLQ+QPR+F+ + IRFK
Sbjct: 144 SEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFK 203

Query: 121 ESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWC 180
           E VERVTEMGFNPQ++QFLVAVFALR+MTKSTWDKKVEVYRKWGLSEEE+ LAF+R+PWC
Sbjct: 204 EIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWC 263

Query: 181 MIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNH 240
           M+ SEDKIN  MDFFVNKIGCESSF ARRP LI  SLKKR+ PRGYVYQVLL KGLIK  
Sbjct: 264 MMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQ 323

Query: 241 KNLVLFFESPEKPFIEKFINPHK-EQIPGLLELYEEKLMDSRR 283
            N+ LF  S EK FIEKFINPHK EQIPGLLELY++KLMDSRR
Sbjct: 324 ANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR 366

BLAST of MELO3C006640.2.1 vs. NCBI nr
Match: XP_004134480.2 (PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 7.0e-122
Identity = 224/282 (79.43%), Postives = 250/282 (88.65%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           PQILSANPEKTLLPKLLFF+SKGLSSPEI ++V S P V   S++KRIIP F YIQA+LG
Sbjct: 84  PQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDPWVLGASINKRIIPAFDYIQAVLG 143

Query: 61  SEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFK 120
           SEEKTL  IK+FAGIL+ DLRIS GP+IEILKQ GVPDS+ILKY  +QPR+FLTN IRFK
Sbjct: 144 SEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSSILKYFPYQPRVFLTNSIRFK 203

Query: 121 ESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWC 180
           E+VERV EMGFNPQQ QF+VAVFALRSMTKSTWDKKVE+ RKWGLSEE++RLAFRR PWC
Sbjct: 204 ETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEILRKWGLSEEDIRLAFRRNPWC 263

Query: 181 MIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNH 240
           M  SEDKIN  MDFFVNK+GCESSFAARRP+L+  SLKKRILPRGYVYQVLLSKGLIK +
Sbjct: 264 MRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKRILPRGYVYQVLLSKGLIKKN 323

Query: 241 KNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 283
           +NL LFFESPEK FIEK+INP KEQIP LLELY++KLM+SRR
Sbjct: 324 ENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMESRR 365

BLAST of MELO3C006640.2.1 vs. NCBI nr
Match: XP_016899006.1 (PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo])

HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120
Identity = 223/282 (79.08%), Postives = 241/282 (85.46%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           PQILSANPEK LLPKLLFF+SKGLSSPEI K+VCS P     SL+KRIIP F YIQA+LG
Sbjct: 84  PQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLG 143

Query: 61  SEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFK 120
           S EK L  IK FA IL  DL IS GP+IEILKQ GVPDSNILKYLQ+QPR+FL N IRFK
Sbjct: 144 S-EKALATIKHFASILVRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFK 203

Query: 121 ESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWC 180
           E VERVTEMGFNPQQ+QF+VAVFALR+MTKSTWDKKVEVYRKWGLSEEE+RL F+R+PWC
Sbjct: 204 EIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWC 263

Query: 181 MIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNH 240
           M+ SEDKIN  MDFFVNKIGCESSF ARRP LI  SLKKR+ PRGYVYQVLL+KGLIK H
Sbjct: 264 MVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKH 323

Query: 241 KNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 283
           +NLV FFE PEK FIEK INPHKEQIP LLELYE+KLMD  R
Sbjct: 324 QNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKLMDYGR 364

BLAST of MELO3C006640.2.1 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 152.5 bits (384), Expect = 3.8e-37
Identity = 88/274 (32.12%), Postives = 136/274 (49.64%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           P +L AN E  LLPKL FF S G+S   +A+ + S                         
Sbjct: 126 PVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXX 185

Query: 61  SEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFK 120
                                         + ++GVP+  I   L   P   +     F+
Sbjct: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQ 245

Query: 121 ESVERVTEMGFNPQQMQFLVAVFALRSM-TKSTWDKKVEVYRKWGLSEEEVRLAFRRYPW 180
              ++  EMGFNPQ+  F++A+ AL     KS WDK  EVY++WG SE+++  AF+++P 
Sbjct: 246 AIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPH 305

Query: 181 CMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKN 240
           CM+ SE KIN  M++FVN++       A+ P++++ SL+KRI+PR  V +VL+S GL+K 
Sbjct: 306 CMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKE 365

Query: 241 HKNLVLFFESPEKPFIEKFINPHKEQIPGLLELY 274
             +L       EK F+EK +  ++E++P L+ LY
Sbjct: 366 DWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

BLAST of MELO3C006640.2.1 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 142.9 bits (359), Expect = 3.0e-34
Identity = 83/265 (31.32%), Postives = 146/265 (55.09%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           P+++  N EK L PKL FF+  G +   + K V     V   SL K++IP  + +++++ 
Sbjct: 96  PRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVA 155

Query: 61  SEEKTLVAIKRFAG--ILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIR 120
            + + L  I    G  +L+ D  +   P+I  L+  G+  S +   L+ QPR+F  +  +
Sbjct: 156 PKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEK 215

Query: 121 FKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYP 180
            +  V R  ++GF       + AV +L S+++ T+D+KV+++   G SE+E+    RR P
Sbjct: 216 LRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSP 275

Query: 181 WCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLI- 240
             +  SEDK+    +F++ ++G E    A+RP ++  +L+KR++PR  V Q+L  KGL+ 
Sbjct: 276 GLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLL 335

Query: 241 ---KNHKNLVLFFESPEKPFIEKFI 260
              K  KN+V   E  E+ F+EK++
Sbjct: 336 KEEKKKKNMVGIVEMTEEAFLEKYV 360

BLAST of MELO3C006640.2.1 vs. TAIR10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.8e-32
Identity = 79/274 (28.83%), Postives = 144/274 (52.55%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           P++LS +PE  + PK                              KR+IP +  ++++L 
Sbjct: 113 PRVLSLSPEDVISPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKRLIPCYDSLKSILV 172

Query: 61  SEEKTLVAIKRFAGILTWDLRISAGPS--IEILKQSGVPDSNILKYLQFQPRLFLTNPIR 120
            EE  +  +KR  GI  + L+I+   S  + I ++ GVPD +I   +Q  P  F +   R
Sbjct: 173 EEESVVKCLKR--GIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERR 232

Query: 121 FKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYP 180
           F E + RV   GF+P++  F+ A+ A    ++S  ++K ++++ +G S+E+   A  R+P
Sbjct: 233 FNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFP 292

Query: 181 WCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIK 240
            C+  S++KI   +++ VN IG ++     RP+++  S++KRI PR  V  +LLSKGL+K
Sbjct: 293 NCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVK 352

Query: 241 NHK-NLVLFFESPEKPFIEKFINPHKEQIPGLLE 272
               N     +     F++KF+  +++++P L++
Sbjct: 353 KEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

BLAST of MELO3C006640.2.1 vs. TAIR10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 91.7 bits (226), Expect = 8.0e-19
Identity = 76/313 (24.28%), Postives = 139/313 (44.41%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           P +L A+ +K L  KL   +S+G SS EI ++V + PR+             K I     
Sbjct: 109 PLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRIL----------GKKSITVYYD 168

Query: 61  SEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYL--QFQPRLFLTNPIR 120
           + +  +VA    +  L    + +   ++  L++ G+P   +L  L  + QP   +     
Sbjct: 169 AVKDIIVADTSSSYELPQGSQGNKIRNVSALRELGMPSRLLLPLLVSKSQP---VCGKEN 228

Query: 121 FKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRK--------W------- 180
           F  S+++V EMGF+P   +F++A+  L  M++ T ++KV V+R         W       
Sbjct: 229 FDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTP 288

Query: 181 --------------------GLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCES 240
                               G S  E  +  +RYP C+  S + +    +F V K+    
Sbjct: 289 SVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPR 348

Query: 241 SFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNHKNLVL---FFESPEKPFIEKFIN 274
           +     P +   S++KRI+PR  + + LLSKGL++    L          ++ F+++++ 
Sbjct: 349 NALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYVM 408

BLAST of MELO3C006640.2.1 vs. TAIR10
Match: AT5G23930.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-14
Identity = 50/181 (27.62%), Postives = 87/181 (48.07%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           P+ L  NPEKTL  KL F +  G SS E+ ++V   P++      K I   + Y+     
Sbjct: 112 PRFLIENPEKTLRAKLHFLKLNGASSSELTEIVSKVPKILGKRGGKWISHYYDYV----- 171

Query: 61  SEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFK 120
              K ++                       L++ GVP   +L  L  + +  +    RF+
Sbjct: 172 ---KEILQDXXXXXXXXXXXXXXXXXXXXXLRKLGVPQRLLLNLLISRAKP-VCGKERFE 231

Query: 121 ESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWC 180
           ESV+++ EMGF+P+  +F+ A++    ++  T ++KV  Y + GLS  EV   F+++P+ 
Sbjct: 232 ESVKKIVEMGFDPKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFS 283

Query: 181 M 182
           +
Sbjct: 292 L 283

BLAST of MELO3C006640.2.1 vs. TrEMBL
Match: tr|A0A1S3AZA9|A0A1S3AZA9_CUCME (uncharacterized protein LOC103484198 OS=Cucumis melo OX=3656 GN=LOC103484198 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 2.9e-140
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0

Query: 32  MVCSFPRVFIGSLDKRIIPNFKYIQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEIL 91
           MVCSFPRVFIGSLDKRIIPNFKYIQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEIL
Sbjct: 1   MVCSFPRVFIGSLDKRIIPNFKYIQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEIL 60

Query: 92  KQSGVPDSNILKYLQFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKS 151
           KQSGVPDSNILKYLQFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKS
Sbjct: 61  KQSGVPDSNILKYLQFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKS 120

Query: 152 TWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPI 211
           TWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPI
Sbjct: 121 TWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPI 180

Query: 212 LIYRSLKKRILPRGYVYQVLLSKGLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLE 271
           LIYRSLKKRILPRGYVYQVLLSKGLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLE
Sbjct: 181 LIYRSLKKRILPRGYVYQVLLSKGLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLE 240

Query: 272 LYEEKLMDSRR 283
           LYEEKLMDSRR
Sbjct: 241 LYEEKLMDSRR 251

BLAST of MELO3C006640.2.1 vs. TrEMBL
Match: tr|A0A1S4DSL1|A0A1S4DSL1_CUCME (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 4.1e-126
Identity = 225/281 (80.07%), Postives = 247/281 (87.90%), Query Frame = 0

Query: 2   QILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLGS 61
           +IL  NPEK L PKLLFF+SKGLSSPEI K+VCS P V  GSL+KRIIPNF Y+QA+ GS
Sbjct: 85  KILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVFGS 144

Query: 62  EEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFKE 121
           EEKTL+ IKRFAGIL WDLRIS GP+IEILKQ GVPDSNI KYLQ+QPR+FL NP+RFKE
Sbjct: 145 EEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKE 204

Query: 122 SVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWCM 181
           +VERV EMGFNPQQ+QF+VAVF LR+MTKSTWDKKVEVYRKWGLSEEE+R+AFR+ P CM
Sbjct: 205 AVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKSPLCM 264

Query: 182 IASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNHK 241
             SEDKIN VMDFFVNK+GCESSFAARRPIL+  SLKKRILPRGY+YQVLLSKGLIK H+
Sbjct: 265 AFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLIKKHE 324

Query: 242 NLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 283
           NL  FFESPEK FIEKFINPH EQI GLLELYEEKL D RR
Sbjct: 325 NLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR 365

BLAST of MELO3C006640.2.1 vs. TrEMBL
Match: tr|A0A1S3AYM0|A0A1S3AYM0_CUCME (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.9e-123
Identity = 226/283 (79.86%), Postives = 250/283 (88.34%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           PQIL+ANPEK LLPKLLFF+SKGLSSPEIAK+VC+FP V  GSL+KRII NF YIQA+LG
Sbjct: 84  PQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLG 143

Query: 61  SEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFK 120
           SEEKTL AIK+FAGIL  DL+IS GP+IEILKQ GVPDSNILKYLQ+QPR+F+ + IRFK
Sbjct: 144 SEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFK 203

Query: 121 ESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWC 180
           E VERVTEMGFNPQ++QFLVAVFALR+MTKSTWDKKVEVYRKWGLSEEE+ LAF+R+PWC
Sbjct: 204 EIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWC 263

Query: 181 MIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNH 240
           M+ SEDKIN  MDFFVNKIGCESSF ARRP LI  SLKKR+ PRGYVYQVLL KGLIK  
Sbjct: 264 MMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQ 323

Query: 241 KNLVLFFESPEKPFIEKFINPHK-EQIPGLLELYEEKLMDSRR 283
            N+ LF  S EK FIEKFINPHK EQIPGLLELY++KLMDSRR
Sbjct: 324 ANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR 366

BLAST of MELO3C006640.2.1 vs. TrEMBL
Match: tr|A0A1S4DSP1|A0A1S4DSP1_CUCME (uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.0e-120
Identity = 223/282 (79.08%), Postives = 241/282 (85.46%), Query Frame = 0

Query: 1   PQILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLG 60
           PQILSANPEK LLPKLLFF+SKGLSSPEI K+VCS P     SL+KRIIP F YIQA+LG
Sbjct: 84  PQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNPWCLAASLNKRIIPAFDYIQAVLG 143

Query: 61  SEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFK 120
           S EK L  IK FA IL  DL IS GP+IEILKQ GVPDSNILKYLQ+QPR+FL N IRFK
Sbjct: 144 S-EKALATIKHFASILVRDLGISVGPNIEILKQIGVPDSNILKYLQYQPRVFLINSIRFK 203

Query: 121 ESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWC 180
           E VERVTEMGFNPQQ+QF+VAVFALR+MTKSTWDKKVEVYRKWGLSEEE+RL F+R+PWC
Sbjct: 204 EIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIRLVFKRHPWC 263

Query: 181 MIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNH 240
           M+ SEDKIN  MDFFVNKIGCESSF ARRP LI  SLKKR+ PRGYVYQVLL+KGLIK H
Sbjct: 264 MVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLAKGLIKKH 323

Query: 241 KNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 283
           +NLV FFE PEK FIEK INPHKEQIP LLELYE+KLMD  R
Sbjct: 324 QNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKLMDYGR 364

BLAST of MELO3C006640.2.1 vs. TrEMBL
Match: tr|A0A1S4DSL0|A0A1S4DSL0_CUCME (uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 4.4e-120
Identity = 224/281 (79.72%), Postives = 242/281 (86.12%), Query Frame = 0

Query: 2   QILSANPEKTLLPKLLFFRSKGLSSPEIAKMVCSFPRVFIGSLDKRIIPNFKYIQAMLGS 61
           +ILS NP+K L PKLLFF+SKGLSSPEI K+VCS P V  GSL+KRIIPNF Y+QA+LGS
Sbjct: 77  KILSLNPQKILSPKLLFFQSKGLSSPEIVKLVCSIPCVLTGSLNKRIIPNFDYLQAVLGS 136

Query: 62  EEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFKE 121
           EEKTL  IK+FAGIL  DLRIS GP+IEILKQ GV DSNILKYLQ+QPR+FL N IRFKE
Sbjct: 137 EEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQDSNILKYLQYQPRMFLINSIRFKE 196

Query: 122 SVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWCM 181
            VERVTEMGFNP ++QF+VAVFALRSMTKSTWDKKVEVYRKWGLSEEE  LAFRR P CM
Sbjct: 197 VVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKVEVYRKWGLSEEEFSLAFRRNPLCM 256

Query: 182 IASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNHK 241
             SEDKIN VMDFFVNKIG ESSF ARRP LI  SLKKRILPRGYVYQVLLSKGLIK HK
Sbjct: 257 AFSEDKINAVMDFFVNKIGWESSFFARRPALISYSLKKRILPRGYVYQVLLSKGLIKKHK 316

Query: 242 NLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 283
           +  LFFE  EK FIEK INPHKEQIPGLLELY++K+MDSRR
Sbjct: 317 SHFLFFECTEKRFIEKIINPHKEQIPGLLELYKQKVMDSRR 357

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008439383.14.4e-140100.00PREDICTED: uncharacterized protein LOC103484198 [Cucumis melo][more]
XP_016898974.16.2e-12680.07PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo][more]
XP_008439382.12.9e-12379.86PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo][more]
XP_004134480.27.0e-12279.43PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus][more]
XP_016899006.13.0e-12079.08PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT5G07900.13.8e-3732.12Mitochondrial transcription termination factor family protein[more]
AT5G64950.13.0e-3431.32Mitochondrial transcription termination factor family protein[more]
AT1G21150.12.8e-3228.83Mitochondrial transcription termination factor family protein[more]
AT1G61990.18.0e-1924.28Mitochondrial transcription termination factor family protein[more]
AT5G23930.12.0e-1427.62Mitochondrial transcription termination factor family protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3AZA9|A0A1S3AZA9_CUCME2.9e-140100.00uncharacterized protein LOC103484198 OS=Cucumis melo OX=3656 GN=LOC103484198 PE=... [more]
tr|A0A1S4DSL1|A0A1S4DSL1_CUCME4.1e-12680.07uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=... [more]
tr|A0A1S3AYM0|A0A1S3AYM0_CUCME1.9e-12379.86uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=... [more]
tr|A0A1S4DSP1|A0A1S4DSP1_CUCME2.0e-12079.08uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=... [more]
tr|A0A1S4DSL0|A0A1S4DSL0_CUCME4.4e-12079.72uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=... [more]
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C006640.2MELO3C006640.2gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006640.2.1.five_prime_UTR.1MELO3C006640.2.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006640.2.1.CDS.1MELO3C006640.2.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006640.2.1.exon.1MELO3C006640.2.1.exon.1exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006640.2.1.three_prime_UTR.1MELO3C006640.2.1.three_prime_UTR.1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C006640.2.1MELO3C006640.2.1-proteinpolypeptide


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 203..237
e-value: 270.0
score: 8.3
coord: 171..202
e-value: 0.075
score: 22.2
coord: 1..25
e-value: 260.0
score: 8.5
coord: 102..132
e-value: 560.0
score: 5.8
coord: 30..61
e-value: 0.0056
score: 25.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 88..237
e-value: 1.9E-13
score: 50.0
coord: 1..137
e-value: 8.0E-11
score: 41.4
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3DG3DSA:1.25.70.10coord: 1..147
e-value: 1.6E-16
score: 62.3
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 1..278
NoneNo IPR availablePANTHERPTHR13068:SF45SUBFAMILY NOT NAMEDcoord: 1..278