MELO3C006636T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006636T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4733266 .. 4734609 (-)
Sequence length	1344

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTCGATCGCCGATGCTCCGCCGCCGACCATTTTTCTTTTCTGTTCTCTCATAGCTTCTTCCTCCTCTGTGGCATTTCTAGTTTCTCCCCTTCTTCTTCTCCAGAAAGAACCAACAGGTCACTCTTCCTTCTCCTCCCAGTTCTTACAGCCATGTCTAACGTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGCCAGTCTTTCCTCAAGGATTTTCCCAAAGTCCGTTGAAATCTCTCAGGTACTTATCGACTTCTTCTGAGATTGTATCATCTCCGGAATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTCAAGAATAAACGGAAGGCTGTAATTGCGTTACTTGCGGATCATGGATTCTCTGAATCACAAATCTCTAGCATTGACAAGAGGTATCCTCAAATTCTTTCTGCGAACCCCGAGAAAATCCTATTGCCCAAACTGTTGTTTTTTCAGTCTAAAGGTCTTTCTTCCCCAGAGATTGCCAAATTAGTATGTTCATTTCCTCGTGTCTTAGCAGGAAGTTTAGACAATCGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTTTCATAAAATACTTTGGGAGTATTCTCACTCATGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATTTTCAGTACCAGCCTAGAGTGTTCTCGAGAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGGTTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGCGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAACGAATATTCCTTTGTTCGTAAGTTCTTCTGAAAACCGTTTCATAGACAAATTCATCAACCCTCATAAGGAGAAGATTCCTGGATTGTTAGAGTCGTATGAACAGAAATTAATGGATTCTAGAAGATAAACAGGTTCCATTTCCTTGAAACTTAACTGTTTTGTTAGTTGATATGTGTAGTGACAACTAAAATTTATATATGTTCAAGAGTATGTGTTTCTA

mRNA sequence

TCCGTCGATCGCCGATGCTCCGCCGCCGACCATTTTTCTTTTCTGTTCTCTCATAGCTTCTTCCTCCTCTGTGGCATTTCTAGTTTCTCCCCTTCTTCTTCTCCAGAAAGAACCAACAGGTCACTCTTCCTTCTCCTCCCAGTTCTTACAGCCATGTCTAACGTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGCCAGTCTTTCCTCAAGGATTTTCCCAAAGTCCGTTGAAATCTCTCAGGTACTTATCGACTTCTTCTGAGATTGTATCATCTCCGGAATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTCAAGAATAAACGGAAGGCTGTAATTGCGTTACTTGCGGATCATGGATTCTCTGAATCACAAATCTCTAGCATTGACAAGAGGTATCCTCAAATTCTTTCTGCGAACCCCGAGAAAATCCTATTGCCCAAACTGTTGTTTTTTCAGTCTAAAGGTCTTTCTTCCCCAGAGATTGCCAAATTAGTATGTTCATTTCCTCGTGTCTTAGCAGGAAGTTTAGACAATCGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTTTCATAAAATACTTTGGGAGTATTCTCACTCATGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATTTTCAGTACCAGCCTAGAGTGTTCTCGAGAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGGTTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGCGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAACGAATATTCCTTTGTTCGTAAGTTCTTCTGAAAACCGTTTCATAGACAAATTCATCAACCCTCATAAGGAGAAGATTCCTGGATTGTTAGAGTCGTATGAACAGAAATTAATGGATTCTAGAAGATAAACAGGTTCCATTTCCTTGAAACTTAACTGTTTTGTTAGTTGATATGTGTAGTGACAACTAAAATTTATATATGTTCAAGAGTATGTGTTTCTA

Coding sequence (CDS)

ATGTCTAACGTGTTTCGCAGAATCCTTCTACTTAGATCTCCATCGCCAGTCTTTCCTCAAGGATTTTCCCAAAGTCCGTTGAAATCTCTCAGGTACTTATCGACTTCTTCTGAGATTGTATCATCTCCGGAATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTCAAGAATAAACGGAAGGCTGTAATTGCGTTACTTGCGGATCATGGATTCTCTGAATCACAAATCTCTAGCATTGACAAGAGGTATCCTCAAATTCTTTCTGCGAACCCCGAGAAAATCCTATTGCCCAAACTGTTGTTTTTTCAGTCTAAAGGTCTTTCTTCCCCAGAGATTGCCAAATTAGTATGTTCATTTCCTCGTGTCTTAGCAGGAAGTTTAGACAATCGAATTATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTTTCATAAAATACTTTGGGAGTATTCTCACTCATGATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATTTTCAGTACCAGCCTAGAGTGTTCTCGAGAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGGTTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGCGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAACGAATATTCCTTTGTTCGTAAGTTCTTCTGAAAACCGTTTCATAGACAAATTCATCAACCCTCATAAGGAGAAGATTCCTGGATTGTTAGAGTCGTATGAACAGAAATTAATGGATTCTAGAAGATAA

Protein sequence

MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRKAVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKLMDSRR*

Homology

[Close]

BLAST of MELO3C006636T1 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 5.0e-78
Identity = 160/351 (45.58%), Postives = 227/351 (64.67%), Query Frame = 1


Query: 15  SPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRKAVIALLADHGFSES 74
           S + P G SQS   ++ YL  S  +      +     + +  +K  +V+A    HGFS+S
Sbjct: 38  SSISPSGKSQS--FTVSYLIDSCGLSHKDALSASKFFSFETPDKPNSVLAFFNSHGFSKS 97

Query: 75  QISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFPRVLAGSLDNRIIPA 134
           QIS I K  P++L+++P+K LLPKL FF SKG S P++AK+V S P +L  SL+N+IIP+
Sbjct: 98  QISKIVKSLPRLLASDPDKTLLPKLQFFYSKGASRPDVAKIVVSTPGILYRSLENQIIPS 157

Query: 135 FDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVPDSNILKYFQYQPRV 194
           F++ +  L S+E  +  IK F  IL  DL   V  NI  L++ GVP SNI      +P  
Sbjct: 158 FNFFKDFLQSDEMAITVIKRFSRILLFDLHTYVASNINALQEFGVPKSNIAGLLMNRPMA 217

Query: 195 FSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEIC 254
           F      F+E +E V +MGFNP +++F++A+ A+RAM KSTW++K++ Y++WG SEEEI 
Sbjct: 218 FMVRPNLFRENLEEVKKMGFNPSQMKFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEEIR 277

Query: 255 LAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVL 314
           LAF + P CM  SEDKI   MDFFVNK+G ESS +ARRP LI LSL+KR+ PR  V QVL
Sbjct: 278 LAFIKLPRCMTHSEDKIMATMDFFVNKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQVL 337

Query: 315 LEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKLMDSRR 366
           L KGLIK  T++ +   S+E  F+ KF+N  KE+ P L++ Y++K+  S++
Sbjct: 338 LSKGLIKNDTSLVVLFESTEKMFLRKFVNGFKEEAPQLMKLYQEKINLSKK 386

[Close]

BLAST of MELO3C006636T1 vs. TrEMBL
Match: A5C3Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 4.6e-76
Identity = 143/303 (47.19%), Postives = 207/303 (68.32%), Query Frame = 1


Query: 58  KRKAVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVC 117
           K  +V+A    HGFS++Q S I K  PQ+L ++P+K LLPKL FF SKG S P++AK+V 
Sbjct: 82  KPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKLQFFYSKGTSKPDVAKIVA 141

Query: 118 SFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQI 177
           S P ++  SL+N++IP++++ +  L S++  +  +K F  IL  D+   V  N+  L++ 
Sbjct: 142 SSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRILLFDIHTYVASNMNALQEF 201

Query: 178 GVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWD 237
           GVP SNI    + QP  F      F+E +E V +MGFNP +++F++AV A+RA  KS+W+
Sbjct: 202 GVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAVQAIRAGGKSSWE 261

Query: 238 KKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALIS 297
           +K+++Y+ WG SEEEI LAF + PWCM+ SEDKI   MDFFVNK+G ESS +ARRP LIS
Sbjct: 262 RKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFVNKMGRESSLIARRPVLIS 321

Query: 298 LSLKKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYE 357
            SL+KR+ PR  V QVLL KGLI K  ++P    S+E  F+ KF+N +KE+ P L++ Y+
Sbjct: 322 HSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLHKFVNVYKEEAPQLMKLYQ 381

Query: 358 QKL 361
           +K+
Sbjct: 382 EKI 384

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BLAST of MELO3C006636T1 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.8e-75
Identity = 146/315 (46.35%), Postives = 213/315 (67.62%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKNKRK--AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKL 101
           S + A  AS  ++ +   K  +V+A    HGFS+SQ S I K  P++L+++P+K LLPKL
Sbjct: 67  SHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPEIAKLVCSFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSIL 161
            FF SKG S P++AK+V S P +L  SL+N+IIP+F++++  L S+E  +  +K F  IL
Sbjct: 127 QFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRIL 186

Query: 162 THDLRISVGPNIEILKQIGVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRL 221
             DL   V  N+  L++ GVP SNI     Y+P  F  N   F++ +E V +MGFNP ++
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQM 246

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 281
           +F++A+ A+RA  +S W++K+++Y+KWG SEEEI LAF + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFV 306

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFID 341
           NK+G ESS +A RP LI LSL+KR+ PR  V QVLL KGLI K  ++ +   S+E  F++
Sbjct: 307 NKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLE 366

Query: 342 KFINPHKEKIPGLLE 355
           +F+N +KE+ P L++
Sbjct: 367 RFVNAYKEEAPQLIK 381

[Close]

BLAST of MELO3C006636T1 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.2e-73
Identity = 153/325 (47.08%), Postives = 213/325 (65.54%), Query Frame = 1


Query: 42  SPESAPLASNAVQLK--NKRKAVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKL 101
           S + A  AS  V  +  +K  +V+AL   HGFS++Q S I K+ PQ+L ++P+K LLPKL
Sbjct: 448 SHKDARSASKYVHFETPDKPNSVLALFNSHGFSKTQTSKIVKKEPQLLLSDPDKTLLPKL 507

Query: 102 LFFQSKGLSSPEIAKLVCSFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSIL 161
            FF SKG S P+IAK+V   P +L  SL+N+IIP+F++ +  L S++  +  +K F  IL
Sbjct: 508 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDFLQSDKMAITVVKRFSRIL 567

Query: 162 THDLRISVGPNIEILKQIGVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRL 221
             DL   V  N+  L++ GVP SNI      QP  F      F+E +E V +MG NP ++
Sbjct: 568 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKKMGSNPSQM 627

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 281
           +F++A+ A+RA  KS+W++K+++Y++WG SEEEI LAF + PWCM+ SEDKI   MDFFV
Sbjct: 628 KFVIAIQAIRAGGKSSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 687

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFID 341
           NK+G ESS +ARRP LIS SL+KR+ PR  V QVLL KGLI K  ++     S+E  F+ 
Sbjct: 688 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLISKDFSLSAVFQSTEIMFLH 747

Query: 342 KFINPHKEKIPGL--LESYEQKLMD 363
           KF++ +KE+ P L  LE  E KL D
Sbjct: 748 KFVDVYKEEAPQLLNLEHKEMKLND 772

HSP 2 Score: 289.7 bits (740), Expect = 5.1e-75
Identity = 151/321 (47.04%), Postives = 212/321 (66.04%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKN--KRKAVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKL 101
           S + A  AS  V  ++  K  +V+AL   HGFS++Q S I K+ PQ+L ++P+K LLPKL
Sbjct: 67  SHKDARSASKYVHFESPDKPNSVLALFNSHGFSKTQTSKIXKKEPQLLLSDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPEIAKLVCSFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSIL 161
            FF SKG S P+IAK+V   P +L  SL+N+IIP+F++ +  L S++  +  +K F  IL
Sbjct: 127 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDXLQSDKMAITVVKRFSRIL 186

Query: 162 THDLRISVGPNIEILKQIGVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRL 221
             DL   V  N+  L++ GVP SNI      QP  F      F+E +E V  MGFNP ++
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKXMGFNPSQM 246

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 281
           +F++A+ A+RA  K +W++K+++Y++WG SEEEI LAF + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVIAIQAIRAGGKXSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 306

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFID 341
           NK+G ESS +ARRP LIS SL+KR+ PR  V QVLL KGLI K  ++     S+E  F+ 
Sbjct: 307 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLINKDFSLSAVFQSTEIMFLH 366

Query: 342 KFINPHKEKIPGLLESYEQKL 361
           KF++ +KE+ P LL  Y++KL
Sbjct: 367 KFVDVYKEEAPQLLNLYQEKL 387

[Close]

BLAST of MELO3C006636T1 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 8.7e-75
Identity = 150/321 (46.73%), Postives = 210/321 (65.42%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKNKRK--AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKL 101
           S ++A  AS  +  K   K  +V A    HGFSESQ S I +  PQ+L ++P+K LL KL
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFQSKGLSSPEIAKLVCSFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSIL 161
            FF SKG S+P++ K++ S P +L  SL+N+IIP+F++ +    SEE T+A +K F  +L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 THDLRISVGPNIEILKQIGVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRL 221
             +  I V  NI  L++ GVP SNI      QPR F      F+E +E V +MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 281
           +F  AV A+  M+KSTW++K++ Y++WG SEE+I LAF + PWCM+ SEDKI   MDFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFID 341
           NK+G ESS +A RP LI LSL+KR+ PR  V QVLL KGLI K  ++ +   S+E  F++
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KFINPHKEKIPGLLESYEQKL 361
           KF+N +KE+ P LL  Y++K+
Sbjct: 360 KFVNGYKEEAPQLLNLYQEKV 380

[Close]

BLAST of MELO3C006636T1 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 229.9 bits (585), Expect = 2.4e-60
Identity = 125/331 (37.76%), Postives = 202/331 (61.03%), Query Frame = 1


Query: 29  SLRYLSTSSEIVSSPESAPLASNAVQLKNKRK--AVIALLADHGFSESQISSIDKRYPQI 88
           +L YL  S  +  SP+SA +AS  + L +  +   V+ LL DHGF+ +QISS+ K+ P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFPRVLAGSLDNRIIPAFDYIQAVLGSEE 148
           L AN E +LLPKL FF S G+S   +A+ + S P +L  SL N++IP+++++++VL S+E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 149 KTLAFIKYFGSILTHDLRISVGPNIEILKQIGVPDSNILKYFQYQPRVFSRNSIRFKETV 208
           K +A ++    +   D   ++ PNI  + + GVP+  I     + P    + +  F+   
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVTEMGFNPQRLQFLVAVFALRAM-TKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMM 268
           ++  EMGFNPQ+  F++A+ AL     KS WDK  EVY++WG SE++I  AFK+HP CMM
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 VSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQTN 328
           +SE KIN  M++FVN++      +A+ P ++  SL+KR+ PR  V +VL+  GL+K+  +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 IPLFVSSSENRFIDKFINPHKEKIPGLLESY 357
           +   +   E  F++K +  ++E++P L+  Y
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of MELO3C006636T1 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 208.0 bits (528), Expect = 9.9e-54
Identity = 109/318 (34.28%), Postives = 190/318 (59.75%), Query Frame = 1


Query: 42  SPESAPLASNAVQLKNKRK--AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKL 101
           S ESA   S  V+L + +K  +V+AL  DHGF+  QI+S+ K +P++LS +PE ++ PKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFQSKGLSSPEIAKLVCSFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSIL 161
           +FF S G S+ + AK++ S P++L+ SL  R+IP +D ++++L  EE  +  +K      
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 162 THDLRISVGPNIEILKQIGVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRL 221
           +  +   V   + I +++GVPD +I    Q  P  F     RF E + RV   GF+P++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 281
            F+ A+ A    ++S  ++K ++++ +G S+E+   A  R P C+ VS++KI   +++ V
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQ-TNIPLFVSSSENRFI 341
           N IG ++  +  RP ++SLS++KR+ PR  V  +LL KGL+KK+  N    +    + F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 342 DKFINPHKEKIPGLLESY 357
           DKF+  +++++P L++ +
Sbjct: 369 DKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of MELO3C006636T1 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-38
Identity = 88/289 (30.45%), Postives = 164/289 (56.75%), Query Frame = 1


Query: 60  KAVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSF 119
           ++VI +L  + FS++QI    + +P+++  N EKIL PKL FF+  G +   + K V   
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 120 PRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFI--KYFGSILTHDLRISVGPNIEILKQI 179
             V+  SL  ++IP  + +++++  + + L  I  +    +L+ D  + + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 180 GVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWD 239
           G+  S +    + QPR+F+ +  + +  V R  ++GF       + AV +L ++++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 240 KKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALIS 299
           +KV+++   G SE+EI    +R P  +  SEDK+    +F++ ++G E   +A+RP ++S
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 300 LSLKKRLNPRGYVYQVLLEKGLI----KKQTNIPLFVSSSENRFIDKFI 343
            +L+KR+ PR  V Q+L EKGL+    KK+ N+   V  +E  F++K++
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

HSP 2 Score: 44.3 bits (103), Expect = 1.9e-04
Identity = 32/125 (25.60%), Postives = 58/125 (46.40%), Query Frame = 1


Query: 19  PQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRKAV----IALLADHGFSES 78
           P+ F+ S  K   Y+S + ++  +  S  L    + L +  +      + L   +GFSE 
Sbjct: 206 PRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSED 265

Query: 79  QISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFPRVLAGSLDNRIIPA 138
           +I+ I +R P ++  + +K+ L    + +  GL    +AK  C    VL+ +L+ R+IP 
Sbjct: 266 EITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPC----VLSYNLEKRVIPR 325

Query: 139 FDYIQ 140
              +Q
Sbjct: 326 LKVLQ 326

[Close]

BLAST of MELO3C006636T1 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-26
Identity = 74/224 (33.04%), Postives = 123/224 (54.91%), Query Frame = 1


Query: 56  KNKRKAVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKL 115
           KN   +V+ LL  HGF+ SQIS+I + YPQ+L A+ EK L PKL F QS+G SS EI ++
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCSFPRVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILK 175
           V S P +L       I   +D+I+  L   EK+    K   S+   +L   +  N+ +L+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKI-RNVSVLR 200

Query: 176 QIGVPDSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKST 235
           ++G+P   +        +       +F+ET+++V EMGF+P   +F+ A+  +  M + T
Sbjct: 201 ELGMPHKLLFSLLISDSQPVCGKE-KFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKT 260

Query: 236 WDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 280
            ++KV +Y+  G    ++  +FK+ P  + VSE K+  +++ F+
Sbjct: 261 IEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL 300

HSP 2 Score: 70.9 bits (172), Expect = 1.9e-12
Identity = 74/294 (25.17%), Postives = 124/294 (42.18%), Query Frame = 1


Query: 63  IALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLS-SPEIAKLVCSFPR 122
           +  L   G S S+I+ I    P+IL     K +     F +   L  S +  KL  S P+
Sbjct: 124 LQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ 183

Query: 123 VLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNI--EILKQIGV 182
              G+L+N+I      +   LG   K L       S+L  D +   G     E LK++  
Sbjct: 184 ---GNLENKIRNVS--VLRELGMPHKLLF------SLLISDSQPVCGKEKFEETLKKVVE 243

Query: 183 P--DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRL--QFLVAVFALRAMTKST 242
              D    K+ +    ++  N    +E V     +GF+   +   F     +LR   K  
Sbjct: 244 MGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKM 303

Query: 243 WDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPAL 302
            D  +E +   G S +E     K  P C+ +S + +    +F V K+      V   PA+
Sbjct: 304 LDS-IETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAV 363

Query: 303 ISLSLKKRLNPRGYVYQVLLEKGLIKKQ-TNIPLFVSSSENRFIDKFINPHKEK 349
              SL+KR+ PRG V + L+ KGL++ +  +I   +  ++  F+++++  H +K
Sbjct: 364 FGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDK 405

[Close]

BLAST of MELO3C006636T1 vs. TAIR10
Match: AT1G61990.1 (AT1G61990.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-26
Identity = 86/333 (25.83%), Postives = 160/333 (48.05%), Query Frame = 1


Query: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120
           +V++L   +GF++SQIS+I   YP +L A+ +K L  KL   QS+G SS EI ++V + P
Sbjct: 86  SVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVP 145

Query: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180
           R+L       I   +D ++ ++ ++  +          L    + +   N+  L+++G+P
Sbjct: 146 RILG---KKSITVYYDAVKDIIVADTSS-------SYELPQGSQGNKIRNVSALRELGMP 205

Query: 181 DSNILKYF--QYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDK 240
              +L     + QP     N   F  ++++V EMGF+P   +F++A+  L  M++ T ++
Sbjct: 206 SRLLLPLLVSKSQPVCGKEN---FDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEE 265

Query: 241 KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKI--------------------------- 300
           KV V+R  G + +++   FK+ P  + VS+ KI                           
Sbjct: 266 KVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPC 325

Query: 301 --------NGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQ 354
                       +F V K+    + +   P +   S++KR+ PR  + + LL KGL++K 
Sbjct: 326 IEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKG 385

[Close]

BLAST of MELO3C006636T1 vs. NCBI nr
Match: gi|659076742|ref|XP_008438844.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X7 [Cucumis melo])

HSP 1 Score: 684.5 bits (1765), Expect = 1.0e-193
Identity = 350/365 (95.89%), Postives = 354/365 (96.99%), Query Frame = 1


Query: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60
           MSN+FRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLK  RK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120
           AVIA LAD+GFSESQISS  KR+PQILSANPEKILLPKLLFFQSKGLSSPEI KLVCS P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180
             LA SL+ RIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360
           KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006636T1 vs. NCBI nr
Match: gi|659076738|ref|XP_008438842.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo])

HSP 1 Score: 676.4 bits (1744), Expect = 2.8e-191
Identity = 342/365 (93.70%), Postives = 351/365 (96.16%), Query Frame = 1


Query: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60
           MSN+FRRILLLRSPS VF  GFS+ PLKSLR+LSTSSEIVSSP+SA LASN VQ+KN RK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120
           A  +   +HGFSESQIS IDK++PQILSANPEKILLPKLLFFQSKGLSSPEI KLVCSFP
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180
           RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360
           KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006636T1 vs. NCBI nr
Match: gi|659076740|ref|XP_008438843.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo])

HSP 1 Score: 634.8 bits (1636), Expect = 9.3e-179
Identity = 322/365 (88.22%), Postives = 339/365 (92.88%), Query Frame = 1


Query: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60
           MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120
           AVIALLADHGFSESQISSIDKR+PQILSANPEKILLPKLLFF+SKGLSSPEIAK+V SFP
Sbjct: 61  AVIALLADHGFSESQISSIDKRFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180
            VL+GSL+NRIIPAFDYIQAVLGSEEKTL  IKYF  ILT DLRISVGPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNI KY QY+PRVF  N IRFKETV+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDFFVNKIGCESSFVA RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360
           KKR+ PRGYVYQVLL KGLIKK  +I +FV  SE  FI+K I+PHKE+IPGLLESYEQKL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006636T1 vs. NCBI nr
Match: gi|659077781|ref|XP_008439382.1| (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 617.8 bits (1592), Expect = 1.2e-173
Identity = 321/366 (87.70%), Postives = 337/366 (92.08%), Query Frame = 1


Query: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60
           MS +FRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+N RK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120
           AVI LLA+HGFS+SQIS I +R PQIL+ANPEKILLPKLLFFQSKGLSSPEIAKLVC+FP
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180
            VL GSL+ RII  FDYIQAVLGSEEKTLA IK F  IL  DL+ISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  +SIRFKE VERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHK-EKIPGLLESYEQK 360
           KKRLNPRGYVYQVLLEKGLIKKQ NIPLFVSSSE RFI+KFINPHK E+IPGLLE Y+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMDSRR 366
           LMDSRR
Sbjct: 361 LMDSRR 366

[Close]

BLAST of MELO3C006636T1 vs. NCBI nr
Match: gi|659076744|ref|XP_008438845.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X8 [Cucumis melo])

HSP 1 Score: 617.1 bits (1590), Expect = 2.0e-173
Identity = 314/365 (86.03%), Postives = 330/365 (90.41%), Query Frame = 1


Query: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60
           MSN+FRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLK  RK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120
           AVIA LAD+GFSESQISS  KR+PQILSANPEKILLPKLLFFQSKGLSSPEI KLVCS P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180
             LA SL+ RIIPAFDYIQAVLGSEEKTL  IKYF  ILT DLRISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNI KY QY+PRVF  N IRFKETV+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDFFVNKIGCESSFVA RP LISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360
           KKR+ PRGYVYQVLL KGLIKK  +I +FV  SE  FI+K I+PHKE+IPGLLESYEQKL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

The following BLAST results are available for this feature:

BLAST of MELO3C006636T1 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	5.0e-78	45.58	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
A5C3Y0_VITVI	4.6e-76	47.19	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1	[more]
F6HDG2_VITVI	1.8e-75	46.35	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	2.2e-73	47.08	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
A5B1K5_VITVI	8.7e-75	46.73	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]

BLAST of MELO3C006636T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	2.4e-60	37.76	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	9.9e-54	34.28	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.5e-38	30.45	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.0e-26	33.04	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	1.8e-26	25.83	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006636T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076742\|ref\|XP_008438844.1\|	1.0e-193	95.89	PREDICTED: uncharacterized protein LOC103483819 isoform X7 [Cucumis melo]	[more]
gi\|659076738\|ref\|XP_008438842.1\|	2.8e-191	93.70	PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo]	[more]
gi\|659076740\|ref\|XP_008438843.1\|	9.3e-179	88.22	PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo]	[more]
gi\|659077781\|ref\|XP_008439382.1\|	1.2e-173	87.70	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]
gi\|659076744\|ref\|XP_008438845.1\|	2.0e-173	86.03	PREDICTED: uncharacterized protein LOC103483819 isoform X8 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006636	MELO3C006636	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006636T1	MELO3C006636T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006636T1.cds1	MELO3C006636T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 160..337 score: 6.7E-20coord: 64..222 score: 3.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 149..180 score: 95.0coord: 286..320 score: 0.95coord: 254..285 score: 1.3coord: 77..108 score: 0.018coord: 185..215 score: 280.0coord: 113..145 score:
None	No IPR available	unknown	Coil	Coil	coord: 353..365 scor
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..360 score: 1.1E
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 42..360 score: 1.1E