MELO3C006631T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006631T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4708722 .. 4710020 (-)
Sequence length	1269

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCCTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATTTCTCAGATTCTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAATCACAAATCTCTGACATTGCCAGGAGGCGGCCTCAAATTCTTTCTGCGAACCCCGAGAAAAGCCTATTGCCCAAATTGTTGTTTCTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATCAGTATGTGCAGTTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATCAAACAGTTTGCGGGTATTCTCGCTCGGGATCTTTGAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCGGTACCGGCCTAGAGTGTTCTTGACAAGTTCCATCCGATTCAAGGAGATTGTTGAGAGAGTTGCGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGAGCAATGACGAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCATGGTGTATGATGCTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAATCATCTTTCGCTGCTAGAAGACCACTTGTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACACGGGAATCTTCATTTGTTCTTTGGGTCTTCTGAACACCGTTTCATAGAAAAATTCATCAACCCTCATAAAAGGAGAACAGATTCCTGGATTGTTGGAGTTGTATGAGCAGATGAGAACAGATTCGATCACTATGAAAATTTAATTGTTTTGCTTTTGAACAGAAAGCTCATATCATTTATCAAAAGAAAATATGATTGAGTTTTTTCTCTTGTTTCTGTTTTCATTTTTTCAAAAAACGGTTGTGTTTGTGAAGTTTCTGTTTTTCTCAGAAACTACAATGAGTAGTTTATTGGAAAAAAAAATGTAATTTACTCAGATTCTCAATCATTT

mRNA sequence

ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCCTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATTTCTCAGATTCTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAATCACAAATCTCTGACATTGCCAGGAGGCGGCCTCAAATTCTTTCTGCGAACCCCGAGAAAAGCCTATTGCCCAAATTGTTGTTTCTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATCAGTATGTGCAGTTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATCAAACAGTTTGCGGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCGGTACCGGCCTAGAGTGTTCTTGACAAGTTCCATCCGATTCAAGGAGATTGTTGAGAGAGTTGCGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGAGCAATGACGAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCATGGTGTATGATGCTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAATCATCTTTCGCTGCTAGAAGACCACTTGTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACACGGGAATCTTCATTTGTTCTTTGGGTCTTCTGAACACCGTTTCATAGAAAAATTCATCAACCCTCATAAAAGGAGAACAGATTCCTGGATTGTTGGAGTTGTATGAGCAGATGAGAACAGATTCGATCACTATGAAAATTTAATTGTTTTGCTTTTGAACAGAAAGCTCATATCATTTATCAAAAGAAAATATGATTGAGTTTTTTCTCTTGTTTCTGTTTTCATTTTTTCAAAAAACGGTTGTGTTTGTGAAGTTTCTGTTTTTCTCAGAAACTACAATGAGTAGTTTATTGGAAAAAAAAATGTAATTTACTCAGATTCTCAATCATTT

Coding sequence (CDS)

ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCCTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATTTCTCAGATTCTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAATCACAAATCTCTGACATTGCCAGGAGGCGGCCTCAAATTCTTTCTGCGAACCCCGAGAAAAGCCTATTGCCCAAATTGTTGTTTCTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATCAGTATGTGCAGTTCCTTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATCAAACAGTTTGCGGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCGGTACCGGCCTAGAGTGTTCTTGACAAGTTCCATCCGATTCAAGGAGATTGTTGAGAGAGTTGCGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGAGCAATGACGAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCATGGTGTATGATGCTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAATCATCTTTCGCTGCTAGAAGACCACTTGTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACACGGGAATCTTCATTTGTTCTTTGGGTCTTCTGAACACCGTTTCATAGAAAAATTCATCAACCCTCATAAAAGGAGAACAGATTCCTGGATTGTTGGAGTTGTATGA

Protein sequence

MSYLFRRILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFAVGPNIEILKQIGVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHKRRTDSWIVGVV*

Homology

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BLAST of MELO3C006631T1 vs. Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.3e-06
Identity = 58/238 (24.37%), Postives = 100/238 (42.02%), Query Frame = 1


Query: 63  IELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVPCV 122
           ++ L + G     I  +  R+PQIL    E +L   + FL   G+ + +I + V A P +
Sbjct: 223 LDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSL 282

Query: 123 LTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFAVGPNIEILKQIGVPDSNILKYLRYRP 182
            + S+   +     Y+   +G        IK+  VG  +++  QI V   +I    RY  
Sbjct: 283 FSYSVENSLRPTIRYLIEEVG--------IKETDVGKVVQLSPQILVQRLDITWNTRY-- 342

Query: 183 RVFLTSSIRFKE--IVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSE 242
            +FL+  +      +V+ V +   +PQ L + +    L          ++   R  G+  
Sbjct: 343 -MFLSKELGAPRDSVVKMVKK---HPQLLHYSIDDGFL---------PRINFLRSIGMCN 402

Query: 243 EEICLAFRRHPWCMMLS-EDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRILPR 298
            +I          + LS ED +     + VN++  E     + P+ LSLSL +RI PR
Sbjct: 403 SDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPR 437

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BLAST of MELO3C006631T1 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 6.2e-70
Identity = 153/367 (41.69%), Postives = 221/367 (60.22%), Query Frame = 1


Query: 7   RILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSPKSASL------------------ 66
           R  L  SP+    H     P  F  F S+S+ I +S +S S                   
Sbjct: 17  RFTLTASPTPQSLHFL---PHHFYPFSSSSTSISTSERSESFTVSYLIDSCGLSHKDALS 76

Query: 67  ASNAVQLENNRK--AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKG 126
           AS  ++ E   K  +V+    +HGFS+SQ S I +  P++L+++P+K+LLPKL F  SKG
Sbjct: 77  ASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKLQFFYSKG 136

Query: 127 LSSPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA---------- 186
            S P++ K V + P +L  SL  +II +F++++  L S+E  +  +K+F+          
Sbjct: 137 ASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRILLFDLHTY 196

Query: 187 VGPNIEILKQIGVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVF 246
           V  N+  L++ GVP SNI   L YRP  F+ +   F++ +E V +MGFNP Q++FV+A+ 
Sbjct: 197 VASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQMKFVLAIQ 256

Query: 247 ALRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCES 306
           A+RA  +S W++K+++Y+KWG SEEEI LAF + PWCM+ SEDKI   MDFFVNKMG ES
Sbjct: 257 AMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFVNKMGRES 316

Query: 307 SFAARRPLVLSLSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHK 344
           S  A RP ++ LSL+KRI+PR  V QVLLSKGLI K  +L + F S+E  F+E+F+N +K
Sbjct: 317 SLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLERFVNAYK 376

[Close]

BLAST of MELO3C006631T1 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 7.5e-68
Identity = 153/341 (44.87%), Postives = 214/341 (62.76%), Query Frame = 1


Query: 9   LLLRSPSSVFSHGFSESPLKF-LRFLSTSSEIVSSPKSASLASNAVQLENNRK--AVIEL 68
           L L S SS  S   SE P  F + +L  S  +  S K A  AS  V  E   K  +V+ L
Sbjct: 416 LYLFSSSSSTSISTSEKPHPFTVSYLINSCGL--SHKDARSASKYVHFETPDKPNSVLAL 475

Query: 69  LANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVPCVLTG 128
             +HGFS++Q S I ++ PQ+L ++P+K+LLPKL F  SKG S P+I K V   P +L  
Sbjct: 476 FNSHGFSKTQTSKIVKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVCSPSILKR 535

Query: 129 SLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA----------VGPNIEILKQIGVPDSNIL 188
           SL  +II +F++ +  L S++  +  +K+F+          V  N+  L++ GVP SNI 
Sbjct: 536 SLENQIIPSFNFFKDFLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIA 595

Query: 189 KYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRK 248
             L  +P  F+     F+E +E V +MG NP Q++FV+A+ A+RA  KS+W++K+++Y++
Sbjct: 596 GLLMNQPMAFMVRPNLFRENLEEVKKMGSNPSQMKFVIAIQAIRAGGKSSWERKIDIYKR 655

Query: 249 WGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRIL 308
           WG SEEEI LAF + PWCM+ SEDKI   MDFFVNKMG ESS  ARRP ++S SL+KRI+
Sbjct: 656 WGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRII 715

Query: 309 PRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHK 337
           PR  V QVLLSKGLI K  +L   F S+E  F+ KF++ +K
Sbjct: 716 PRYSVVQVLLSKGLISKDFSLSAVFQSTEIMFLHKFVDVYK 754

HSP 2 Score: 270.8 bits (691), Expect = 2.3e-69
Identity = 144/307 (46.91%), Postives = 201/307 (65.47%), Query Frame = 1


Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKL 101
           S K+A  AS  +  +   K  +V     +HGFS+SQ S I R +PQ+L ++P+KSLL KL
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFLQSKGLSSPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA--- 161
            F  SKG S+P++VK + + P +L  SL  +II +F++ +    SEE T+A +K+F+   
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 -------VGPNIEILKQIGVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQL 221
                  V  NI  L++ GVP SNI   L  +PR F+     F+EI+E V +MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFV 281
           +F  AV A+  M+KSTW++K++ Y++WG SEE+I LAF + PWCM+ SEDKI   MDFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKMGCESSFAARRPLVLSLSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIE 337
           NKMG ESS  A RP ++ LSL+KRI+PR  V QVLLSKGLI K  +L + F S+E  F+E
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

[Close]

BLAST of MELO3C006631T1 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.2e-68
Identity = 147/307 (47.88%), Postives = 199/307 (64.82%), Query Frame = 1


Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKL 101
           S K A  AS     E   K  +V+    +HGFS+SQIS I +  P++L+++P+K+LLPKL
Sbjct: 61  SHKDALSASKFFSFETPDKPNSVLAFFNSHGFSKSQISKIVKSLPRLLASDPDKTLLPKL 120

Query: 102 LFLQSKGLSSPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA--- 161
            F  SKG S P++ K V + P +L  SL  +II +F++ +  L S+E  +  IK+F+   
Sbjct: 121 QFFYSKGASRPDVAKIVVSTPGILYRSLENQIIPSFNFFKDFLQSDEMAITVIKRFSRIL 180

Query: 162 -------VGPNIEILKQIGVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQL 221
                  V  NI  L++ GVP SNI   L  RP  F+     F+E +E V +MGFNP Q+
Sbjct: 181 LFDLHTYVASNINALQEFGVPKSNIAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQM 240

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFV 281
           +FV+A+ A+RAM KSTW++K++ Y++WG SEEEI LAF + P CM  SEDKI   MDFFV
Sbjct: 241 KFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFV 300

Query: 282 NKMGCESSFAARRPLVLSLSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIE 337
           NKMG ESS  ARRPL++ LSL+KRI+PR  V QVLLSKGLIK   +L + F S+E  F+ 
Sbjct: 301 NKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQVLLSKGLIKNDTSLVVLFESTEKMFLR 360

[Close]

BLAST of MELO3C006631T1 vs. TrEMBL
Match: A5C3Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 7.5e-68
Identity = 139/307 (45.28%), Postives = 200/307 (65.15%), Query Frame = 1


Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKL 101
           S K A  AS  +  E   K  +V+    +HGFS++Q S I +  PQ+L ++P+K+LLPKL
Sbjct: 64  SHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKL 123

Query: 102 LFLQSKGLSSPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA--- 161
            F  SKG S P++ K V + P ++  SL  ++I ++++ +  L S++  +  +K+F+   
Sbjct: 124 QFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRIL 183

Query: 162 -------VGPNIEILKQIGVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQL 221
                  V  N+  L++ GVP SNI   LR +P  F+     F+E +E V +MGFNP Q+
Sbjct: 184 LFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQM 243

Query: 222 QFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFV 281
           +FV+AV A+RA  KS+W++K+++Y+ WG SEEEI LAF + PWCM+ SEDKI   MDFFV
Sbjct: 244 KFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFV 303

Query: 282 NKMGCESSFAARRPLVLSLSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIE 337
           NKMG ESS  ARRP+++S SL+KRI+PR  V QVLLSKGLI K  +L   F S+E  F+ 
Sbjct: 304 NKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLH 363

[Close]

BLAST of MELO3C006631T1 vs. TrEMBL
Match: A5C3X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.2e-67
Identity = 152/349 (43.55%), Postives = 217/349 (62.18%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKF-LRFLSTSSEIVSSPKSASLASNAVQLENNR 60
           + +L   + L  S S+  S   SE P  F + +L  S  +  S K A  AS  V  E+  
Sbjct: 29  LHFLLDHLYLFSSSSTSIST--SEKPHPFTVSYLINSCGL--SHKDARSASKYVHFESPD 88

Query: 61  K--AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVC 120
           K  +V+ L  +HGFS++Q S I ++ PQ+L ++P+K+LLPKL F  SKG S P+I K V 
Sbjct: 89  KPNSVLALFNSHGFSKTQTSKIXKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVV 148

Query: 121 AVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA----------VGPNIEILKQI 180
             P +L  SL  +II +F++ +  L S++  +  +K+F+          V  N+  L++ 
Sbjct: 149 CSPSILKRSLENQIIPSFNFFKDXLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEF 208

Query: 181 GVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWD 240
           GVP SNI   L  +P  F+     F+E +E V  MGFNP Q++FV+A+ A+RA  K +W+
Sbjct: 209 GVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKXMGFNPSQMKFVIAIQAIRAGGKXSWE 268

Query: 241 KKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLS 300
           +K+++Y++WG SEEEI LAF + PWCM+ SEDKI   MDFFVNKMG ESS  ARRP ++S
Sbjct: 269 RKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLIS 328

Query: 301 LSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHK 337
            SL+KRI+PR  V QVLLSKGLI K  +L   F S+E  F+ KF++ +K
Sbjct: 329 PSLEKRIIPRYSVVQVLLSKGLINKDFSLSAVFQSTEIMFLHKFVDVYK 373

[Close]

BLAST of MELO3C006631T1 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 218.0 bits (554), Expect = 9.1e-57
Identity = 121/304 (39.80%), Postives = 187/304 (61.51%), Query Frame = 1


Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKL 101
           SP SA++AS  + L++  +   V+ LL +HGF+ +QIS + ++RP +L AN E  LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFLQSKGLSSPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA--- 161
            F  S G+S   + +++ + P +LT SL  ++I +++++++VL S+EK +AA+++     
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 162 -------VGPNIEILKQIGVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQL 221
                  + PNI  + + GVP+  I   L + P   +  +  F+ I ++  EMGFNPQ+ 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFVVAVFALRAM-TKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFF 281
            FV+A+ AL     KS WDK  EVY++WG SE++I  AF++HP CMMLSE KIN  M++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 VNKMGCESSFAARRPLVLSLSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFI 333
           VN+M       A+ P+VL  SL+KRI+PR  V +VL+S GL+K+  +L       E  F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

[Close]

BLAST of MELO3C006631T1 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-45
Identity = 112/349 (32.09%), Postives = 191/349 (54.73%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSP----KSASLASNAVQLE 60
           + +L  RI  L S S V S    +       F  T S +V S     +SA   S  V+L 
Sbjct: 26  LGFLVGRIRTLCSVSQVKSENLEKQKPCLESF--TVSYLVDSCGLSLESAKSNSRFVKLV 85

Query: 61  NNRK--AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVK 120
           +++K  +V+ L  +HGF+  QI+ + +  P++LS +PE  + PKL+F  S G S+ +  K
Sbjct: 86  SSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAK 145

Query: 121 SVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQ----------FAVGPNIEIL 180
            + + P +L+ SL+KR+I  +D ++++L  EE  +  +K+            V   + I 
Sbjct: 146 MISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSIC 205

Query: 181 KQIGVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKS 240
           +++GVPD +I   ++  P  F +   RF E++ RV   GF+P++  FV A+ A    ++S
Sbjct: 206 RELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSES 265

Query: 241 TWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPL 300
             ++K ++++ +G S+E+   A  R P C+ +S++KI   +++ VN +G ++     RP+
Sbjct: 266 AMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPV 325

Query: 301 VLSLSLKKRILPRGYVYQVLLSKGLIKKHG-NLHLFFGSSEHRFIEKFI 333
           VLSLS++KRI PR  V  +LLSKGL+KK   N           F++KF+
Sbjct: 326 VLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFV 372

[Close]

BLAST of MELO3C006631T1 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 149.4 bits (376), Expect = 4.0e-36
Identity = 95/298 (31.88%), Postives = 155/298 (52.01%), Query Frame = 1


Query: 51  NAVQLENNRKAVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSP 110
           N   LE  R +VI++L ++ FS +QI    R  P+++  N EK L PKL F +  G +  
Sbjct: 64  NLKSLEQPR-SVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGS 123

Query: 111 EIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAI------------KQFAVG 170
            + K V     V+  SL K++I   + +++++  + + L  I                + 
Sbjct: 124 GLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLL 183

Query: 171 PNIEILKQIGVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFAL 230
           PNI  L+  G+  S +   LR +PR+F  S  + +  V R  ++GF       V AV +L
Sbjct: 184 PNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISL 243

Query: 231 RAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSF 290
            ++++ T+D+KV+++   G SE+EI    RR P  +  SEDK+    +F++ +MG E   
Sbjct: 244 SSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREA 303

Query: 291 AARRPLVLSLSLKKRILPRGYVYQVLLSKGLI----KKHGNLHLFFGSSEHRFIEKFI 333
            A+RP VLS +L+KR++PR  V Q+L  KGL+    KK  N+      +E  F+EK++
Sbjct: 304 LAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

HSP 2 Score: 46.6 bits (109), Expect = 3.6e-05
Identity = 33/122 (27.05%), Postives = 56/122 (45.90%), Query Frame = 1


Query: 22  FSESPLKFLRFLSTSSEIVSSPKSASLASNAVQL----ENNRKAVIELLANHGFSQSQIS 81
           F+ S  K   ++S + ++  +  S  L    + L    E      ++L   +GFS+ +I+
Sbjct: 209 FNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEIT 268

Query: 82  DIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVPCVLTGSLNKRIIHNFDY 140
           DI RR P ++  + +K  L    +L+  GL    + K     PCVL+ +L KR+I     
Sbjct: 269 DIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKR----PCVLSYNLEKRVIPRLKV 326

[Close]

BLAST of MELO3C006631T1 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 125.9 bits (315), Expect = 4.7e-29
Identity = 76/225 (33.78%), Postives = 127/225 (56.44%), Query Frame = 1


Query: 44  KSASLASNAVQLEN--NRKAVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLF 103
           K A   S  V  E+  N  +V+ LL ++GF  SQIS I R  P++L  + EKSL PKL F
Sbjct: 67  KLAETISKKVTFEDKVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQF 126

Query: 104 LQSKGLSSPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFAVG--- 163
           L+S+G SS E+++ V  VP +L     + +   +D+++ ++   +    +  +   G   
Sbjct: 127 LKSRGASSSEVIEIVSNVPTILDKKGEESVSLYYDFVKDIMQDGKSLCISCPEGKKGNRI 186

Query: 164 PNIEILKQIGVPDSNILKYL--RYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVF 223
            NI +L+++GVP   +   L  RY+P   +    +F+E +++V +MGF+P + +FV A+ 
Sbjct: 187 RNISVLRELGVPQKLLFSLLISRYQP---VCGKEKFEESLKKVVDMGFDPAKSKFVEALH 246

Query: 224 ALRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKI 262
            +  M++ T ++KV VY++ G SE EI   F++ P+ +  SE KI
Sbjct: 247 VVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288

HSP 2 Score: 57.4 bits (137), Expect = 2.1e-08
Identity = 43/217 (19.82%), Postives = 93/217 (42.86%), Query Frame = 1


Query: 126 SLNKRIIHNFDYIQAVLGSEEKTLAAIKQFAVGPNIEILKQIGVPDSNILKYLRYRPRVF 185
           SL K +   FD  ++        +  + +  +   + + K++G  ++ I    +  P   
Sbjct: 222 SLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFL 281

Query: 186 LTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKV----EVYRKWGLSEE 245
             S  +   + E + + G   ++   +++V   R     + ++K+    E++   G S +
Sbjct: 282 KFSEKKIILMFETLKKCGLVEEE---IISVLKSRPQCIRSSEQKILDSIEMFLGLGFSRD 341

Query: 246 EICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRILPRGYVY 305
           +  +  +R+P C   S + +    +  V  M          P VL  SL+KRI+PR  V 
Sbjct: 342 DFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIVPRSNVI 401

Query: 306 QVLLSKGLI-KKHGNLHLFFGSSEHRFIEKFINPHKR 338
           + L+SKGLI  ++  +      ++  F+++++  H +
Sbjct: 402 KALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKHDK 435

[Close]

BLAST of MELO3C006631T1 vs. TAIR10
Match: AT5G23930.1 (AT5G23930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-28
Identity = 88/275 (32.00%), Postives = 144/275 (52.36%), Query Frame = 1


Query: 5   FRRILLLRSPSSVFSHGFSE--SPLKFL-------RFLSTSSEIVSS-------PKSASL 64
           +R + LL   SS F+  FS   +  K L       R   T S ++ S        +S S+
Sbjct: 18  WRNLNLLLQNSSAFTESFSSVVTTTKDLSLEDERKRKTFTVSYLIDSLGLTTKLAESISM 77

Query: 65  ASNAVQLENNRKAVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLS 124
            +N  + + N  +V++LL ++GF  SQIS I    P+ L  NPEK+L  KL FL+  G S
Sbjct: 78  KANFDE-KGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGAS 137

Query: 125 SPEIVKSVCAVPCVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAI--KQFAVGPNIEILKQ 184
           S E+ + V  VP +L     K I H +DY++ +L  ++ + ++   KQ     N+ +L++
Sbjct: 138 SSELTEIVSKVPKILGKRGGKWISHYYDYVKEILQDQDSSSSSSKRKQTNRNRNVSVLRK 197

Query: 185 IGVPDSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTW 244
           +GVP   +L  L  R +  +    RF+E V+++ EMGF+P+  +FV A++    ++  T 
Sbjct: 198 LGVPQRLLLNLLISRAKP-VCGKERFEESVKKIVEMGFDPKSPKFVNALYVFYELSDKTI 257

Query: 245 DKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKI 262
           ++KV  Y + GLS  E+   F++ P+ +  SE  I
Sbjct: 258 EEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNI 290

HSP 2 Score: 69.3 bits (168), Expect = 5.2e-12
Identity = 34/109 (31.19%), Postives = 58/109 (53.21%), Query Frame = 1


Query: 228 KKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLS 287
           K V+ + + G +++E+ +  +RHP C+ L+ D +    +F V  MG      A  P+VL 
Sbjct: 327 KSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLG 386

Query: 288 LSLKKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHK 337
            SL+K +LPR  V + L+S GLI +   +     S + +F++ F+  H+
Sbjct: 387 FSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLKLFVEKHQ 435

HSP 3 Score: 37.0 bits (84), Expect = 2.9e-02
Identity = 15/42 (35.71%), Postives = 27/42 (64.29%), Query Frame = 1


Query: 228 KKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFV 270
           +K E  ++ GL++EE+CL  +++P C+  SE+KI  ++  F+
Sbjct: 292 QKFETLKRVGLTKEEVCLVVKKYPECVGTSEEKIVKSVKTFL 333

[Close]

BLAST of MELO3C006631T1 vs. NCBI nr
Match: gi|659077775|ref|XP_008439379.1| (PREDICTED: uncharacterized protein LOC103484194 [Cucumis melo])

HSP 1 Score: 628.2 bits (1619), Expect = 8.3e-177
Identity = 323/338 (95.56%), Postives = 325/338 (96.15%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MSYLFRRILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSPKSASLASNAVQLENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVP 120
           AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVP
Sbjct: 61  AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVP 120

Query: 121 CVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFAVGPNIEILKQIGVPDSNILKYLRY 180
           CVLTGSLNKRIIHNFDYIQAVLG            +VGPNIEILKQIGVPDSNILKYLRY
Sbjct: 121 CVLTGSLNKRIIHNFDYIQAVLG-----------ISVGPNIEILKQIGVPDSNILKYLRY 180

Query: 181 RPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSE 240
           RPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSE
Sbjct: 181 RPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSE 240

Query: 241 EEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRILPRGYV 300
           EEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRILPRGYV
Sbjct: 241 EEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRILPRGYV 300

Query: 301 YQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHKRR 339
           YQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHK +
Sbjct: 301 YQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHKEQ 327

[Close]

BLAST of MELO3C006631T1 vs. NCBI nr
Match: gi|659077781|ref|XP_008439382.1| (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 583.2 bits (1502), Expect = 3.1e-163
Identity = 300/346 (86.71%), Postives = 315/346 (91.04%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MSYLFRRILLLRSPSSVFSHGFSESPLK LRFLSTSSEIVSSPKSASLASNAVQLENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVP 120
           AVIELLANHGFSQSQISDI RRRPQIL+ANPEK LLPKLLF QSKGLSSPEI K VC  P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 CVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQF----------AVGPNIEILKQIGVP 180
            VLTGSLNKRII+NFDYIQAVLGSEEKTLAAIKQF          +VGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNILKYL+Y+PRVF+ SSIRFKEIVERV EMGFNPQ+LQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSL 300
           EVYRKWGLSEEEICLAF+RHPWCMM+SEDKINGAMDFFVNK+GCESSF ARRP ++SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHK 337
           KKR+ PRGYVYQVLL KGLIKK  N+ LF  SSE RFIEKFINPHK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHK 346

[Close]

BLAST of MELO3C006631T1 vs. NCBI nr
Match: gi|659077777|ref|XP_008439380.1| (PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo])

HSP 1 Score: 540.4 bits (1391), Expect = 2.3e-150
Identity = 283/348 (81.32%), Postives = 304/348 (87.36%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           M  LFRR +LLR  SSVFSHGFSE PLK LR+LSTSS+IVSSP SA LASNA+QL+N RK
Sbjct: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRK 60

Query: 61  AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVP 120
           AVI LLA+HGFS+SQISD+ +R PQILSANPEKSLLPKLLF QSKGLSSPEIVK VC+ P
Sbjct: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 CVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQFA----------VGPNIEILKQIGVP 180
            VLTGSL+KRII  FDYIQAVLGSEEKTLA+IKQFA           GPNIEILKQIGVP
Sbjct: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180

Query: 181 DSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNI KYL+Y+PRVFL + +RFKE VERV EMGFNPQQLQFVVAVF LRAMTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSL 300
           EVYRKWGLSEEEI LAFRRHPW MM SEDKINGAMDFFVNKMGCE+SFAARRP++LSLSL
Sbjct: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHKRR 339
           KKRILPRGYVYQVLLSKGLIKKH NL LFF SSE+ FIEKFINPHK +
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQ 348

[Close]

BLAST of MELO3C006631T1 vs. NCBI nr
Match: gi|659076763|ref|XP_008438854.1| (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 538.9 bits (1387), Expect = 6.6e-150
Identity = 277/345 (80.29%), Postives = 300/345 (86.96%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFRRILLLRSPSS FSHGFSE PLKFLR+LSTSSEIVSSPKSASLASNAVQL+NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVP 120
           A++ LLANHGFS+SQISDI +R+ +IL  NPEK L PKLLF QSKGLSSPEIVK VC++P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 CVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQF----------AVGPNIEILKQIGVP 180
           CVLTGSLNKRII NFDY+QAV GSEEKTL  IK+F          +VGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNI KYL+Y+PRVFL + +RFKE VERV EMGFNPQQLQFVVAVF LRAMTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSL 300
           EVYRKWGLSEEEI +AFR+ P CM  SEDKING MDFFVNK+GCESSFAARRP++LSLSL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPH 336
           KKRILPRGY+YQVLLSKGLIKKH NL  FF S E RFIEKFINPH
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPH 345

[Close]

BLAST of MELO3C006631T1 vs. NCBI nr
Match: gi|659076738|ref|XP_008438842.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo])

HSP 1 Score: 537.7 bits (1384), Expect = 1.5e-149
Identity = 277/348 (79.60%), Postives = 300/348 (86.21%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKFLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFRRILLLRSPSSVFSHGFSE PLK LRFLSTSSEIVSSPKSASLASN VQ++NNRK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIELLANHGFSQSQISDIARRRPQILSANPEKSLLPKLLFLQSKGLSSPEIVKSVCAVP 120
           A      NHGFS+SQISDI ++ PQILSANPEK LLPKLLF QSKGLSSPEIVK VC+ P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 CVLTGSLNKRIIHNFDYIQAVLGSEEKTLAAIKQF----------AVGPNIEILKQIGVP 180
            VL GSL+ RII  FDYIQAVLGSEEKTLA IK F          +VGPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLRYRPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240
           DSNILKY +Y+PRVF  +SIRFKE VERV EMGFNPQ+LQF+VAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSL 300
           EVYRKWGLSEEEICLAF+RHPWCMM+SEDKINGAMDFFVNK+GCESSF ARRP ++SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHKRR 339
           KKR+ PRGYVYQVLL KGLIKK  N+ LF  SSE+RFI+KFINPHK +
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEK 348

The following BLAST results are available for this feature:

BLAST of MELO3C006631T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MTEF9_ARATH	5.3e-06	24.37	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana G...	[more]

BLAST of MELO3C006631T1 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG2_VITVI	6.2e-70	41.69	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	7.5e-68	44.87	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG3_VITVI	1.2e-68	47.88	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
A5C3Y0_VITVI	7.5e-68	45.28	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1	[more]
A5C3X9_VITVI	2.2e-67	43.55	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1	[more]

BLAST of MELO3C006631T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	9.1e-57	39.80	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.1e-45	32.09	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	4.0e-36	31.88	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	4.7e-29	33.78	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	1.8e-28	32.00	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006631T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077775\|ref\|XP_008439379.1\|	8.3e-177	95.56	PREDICTED: uncharacterized protein LOC103484194 [Cucumis melo]	[more]
gi\|659077781\|ref\|XP_008439382.1\|	3.1e-163	86.71	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]
gi\|659077777\|ref\|XP_008439380.1\|	2.3e-150	81.32	PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo]	[more]
gi\|659076763\|ref\|XP_008438854.1\|	6.6e-150	80.29	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]
gi\|659076738\|ref\|XP_008438842.1\|	1.5e-149	79.60	PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006631	MELO3C006631	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006631T1	MELO3C006631T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006631T1.cds2	MELO3C006631T1.cds2	CDS
MELO3C006631T1.cds1	MELO3C006631T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 159..327 score: 2.2E-19coord: 63..213 score: 1.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 175..205 score: 320.0coord: 276..310 score: 20.0coord: 77..108 score: 7.9E-4coord: 113..145 score: 6.5coord: 244..275 score:
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..340 score: 8.3E
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 42..340 score: 8.3E