MELO3C006479T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006479T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	rRNA-processing EFG1
Location	chr6 : 3551001 .. 3554744 (-)
Sequence length	1586

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCCGAAAGAAAATCCAAAAAGTTAAAAAGAGAAAAAACTCATGTTGGGAGAGTGAAACAAAGAGAGAGATATCCCTCTCCGCCTCCGGTGCTATGAACACACCGGTCTGGTGCTGAGAGTCTCTTCGCAAAACCCTTGCCCTTCAAACCACGTTCTAGGGCACAATCTGACAATCACAATCCCCTCTCTGCCTCTCCTCTTCTCCCTTATCTCCTTTTTTCCCAACCATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCGGCACGCCGATCGAAGGGTTTGGCCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGGTTCCTTCCAATTCTTTTTTTTTCCTTTTTTTTTTTCCTTCTTTCGCTTTTAGAAATCGTCGGTTGACATTGTAGTTCTGGGAGCTGTTCCAGTTCGTTTTAGGGTTTTGGGATTTGTTACCTGTTTAAGTTTGGTAAGATTTGTTGCTGGGGTTTCTCTTACGATCAAATAAAATAACACTTGATTCTTAGGATGGGTTTTTTTGCATGTTGAATTTGATTCATTGGGATTACTGGAGTTTAATATTGACATGTTTTAATTAGGATAAGTGTGTACTTACTATATGAAGTGACTCAAATGTTGAGGTGAAGGATGTTATGGAGGATTGTTTAGTTTCTGTGTGGGTTTGGTTTTCGAGATATTTTTTGGTTATTACACCGAGTATCTTTTGATGAGGAAGATACGTACCTTTGTTTGTTTTTTTTTTTTTTTTTTTTTAGCTCCGACGTTTACTGTGCGTGTTTGTTGTTAATTTCATTCCTCCAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAGTTGAGCGCAAAATATTCTTGCGCGACAGGAAGATAAAATTTTTTGGTAATACTTGGTAATAGTTTTTCTGTCATTTGATGGGGTTTGTTTTTCAAGCATGTGTCCAATTTTTATTTATTGTCTATTGTTCATTTTCTTTTAAAACCTTGCCCTTAATTTAGAGAGGAGAAAAATTGAAAGAAGAATTAGGCGGCTTGAGAAACTTCAGCGTGCTCCATCTGGCCAGTTTCAAGATTCAGATGTTGCAGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGGTATGTAATAGAACATTTATTTGTTGTAGAAGTATGCATATGTGAGTGTATGTGCATTTGTATACATTATGCATATAATATATTTATGTATGTATATAATGTATATAATAAATGCTTCCATATGCTGGAGATCATCTAACCTTTTCTTTTCTTTTCTTTTTTGGTTGTAGTTACTTCATAGTCTTCACTATTCTGTTTTTCTTTCCTAAAATATCATCATGACACACATTTACTTTTTTTCATTTTTTCTAATGCCAATACAAATTCTTAGACAACCCTGAATTCTTGCATTGTTGATTTACTTGTCTCTCATAAACTAGAGGAGGTATAAACTGTAGATTCAGCTTTTGTTTGCCACGTGGTTTGTTCTTTCCCCATTTACCCCTGAATGAAGAATCAACAATAGTTACAACAGATGTAGTGATAAGTATAGCACTTGGATTTTCATTAACCTCTATAATTGCAGACATGAAAGTTTTTCGTTTGAATGCAGTTCTTTCCCAAAACAGAAAAGTATGTAGCTTTATTTACCGGAAGTGATGATTCAGACATGGTTGATAGGAGAAAGAAGTTACGTGAGCAGATTAAAGCCAATTTGATTGCTGCGGCGGCTAGTGGAAAGGATTTAGAAGGTGGTTTCTTTAACATATTTTCTACTTTTTTTCTCTCATATTTTTGGCTTAATTTTTTTTTCTGCCAAGTAGTTGGGGAATTTTCTTAGAATATAGGTTTATGGACGAAGTGCTACCTACAACATTTAGCAACCTAGTTAAATTTTAAAATCAACTTATTAGAAAAATGTTTAAATGTAGCCTTTTTTTTCTGAAACCTTTGGGTTGAAAGAAAGACAAGGAACCTTGATACACGAGAACCTTTGGTTTGAAAGGATACCTTGTGACAGTTCTTATATTTAGTTCTATTGGCTGCTTTATTTAAAATCTCCGTTGAGCAATTATAGTTTCAATGCTATTTTAGCAACCCATAGAACATTTTGTCTTCTCTATGTTATCAACTTGTTGAACAACTTTTTCATTTAAACAATTTCCATTTGCTCAATGGAAATTGGTTTTTTATATAGAAAAGTACATTTCCCCTAATATTTTGAATATTGTAGTTTTTTATAGTTGTTTTTATCAAGATCTTAATATGCTCTTTTTAATGACGTGGAATTGACTCAAACAGAGACCGGTAGTGAGGATGATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGTATGCAGGCTTTGAAGTTTCTTTCTATTCTTGTTTGATAATTTTTTGCGAGAGTTTGGCCGTTTGGGTATATTGAATGATCATCCTATGCTTTGGCAGGGAACAAGCTTCCAGTACTTCCGGCAAAGCAGCATCCGGCATGTCTAGTGATGAAAAAAAAATTCATCAGGTTTATATGTGATTGCTTTTGTCTTGTTCCCTCCCCGTCACGCACATCACTTTTTCCATCATCCTCTTATTTGACTAGCATTTTATGTAGAGGCAGATTTCTGCCAGAGCCTTGATGCCTCCTCCTCGTCCTACCAAATCATTTTCAAGTTCAGCTCAAGCTTGGACAAAAGCTGGATCTTCGTTGAGAAAATCTTCCACAAATCACAGGGCTGAATTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTGGATCTTTTAAAGCTAGGGGATCCTCAAACTCCTCGCATACAGGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCACACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAACAGGTATACCCCTTTTTACCAAAAATTCATTCCTTCACGCTAATATTTGTCTTCTACTTCATTAACTCCTGTGCTATGATAATTGAAATTCAATATTCGGAAAATTCTAATTGAAATTACCTGATAATTATAGCAGTATAGCAAGTATAAATGTATAATGCATATTCCTAGTCTCGATCCCCTTCTCATATATCCTTGTAAGAAGTTGGCTGTTGCTTCAAAGTCCTCTCACTCCCCAGTTCCCACCATACACAAACTTGTGAATTATTTATTTCCATGTGCTTGTGAAAGTACTTTGTACTCATTGACCAGTCCCCTTTTCACAGGTATGATAGATTGGCCTTGGTGCGCTGTAACATTACAAGCCTAAACCTGACTTCTGAAACGGATTCTGAATTTAACCCTTCGATGAAAGTATCTTATCTTATCGGTTCTCGACCCTTTTGGCGGTTTGCTCTGCATATATCAAGGGTTTCAGAAAAATTATTTCCTTTAGTTGTGTAATGATCTCTATGATCTTTTATTGTGGCTCTTTTTTTTCCCCTTGTTTTCTTTCCTTTTGGATCATCAGAAAAATCTTCACAGGTTGTGGTTTTGGGTGGTTTTCTTTTCTATACGGTTGAAACTTGTAATGAAACCTGAATCTTATATACCATGCTTACTCTGTGGCCTTCGTCAAAA

mRNA sequence

GTCCCGAAAGAAAATCCAAAAAGTTAAAAAGAGAAAAAACTCATGTTGGGAGAGTGAAACAAAGAGAGAGATATCCCTCTCCGCCTCCGGTGCTATGAACACACCGGTCTGGTGCTGAGAGTCTCTTCGCAAAACCCTTGCCCTTCAAACCACGTTCTAGGGCACAATCTGACAATCACAATCCCCTCTCTGCCTCTCCTCTTCTCCCTTATCTCCTTTTTTCCCAACCATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCGGCACGCCGATCGAAGGGTTTGGCCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAGTTGAGCGCAAAATATTCTTGCGCGACAGGAAGATAAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGGCGGCTTGAGAAACTTCAGCGTGCTCCATCTGGCCAGTTTCAAGATTCAGATGTTGCAGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAGTATGTAGCTTTATTTACCGGAAGTGATGATTCAGACATGGTTGATAGGAGAAAGAAGTTACGTGAGCAGATTAAAGCCAATTTGATTGCTGCGGCGGCTAGTGGAAAGGATTTAGAAGAGACCGGTAGTGAGGATGATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGGAACAAGCTTCCAGTACTTCCGGCAAAGCAGCATCCGGCATGTCTAGTGATGAAAAAAAAATTCATCAGAGGCAGATTTCTGCCAGAGCCTTGATGCCTCCTCCTCGTCCTACCAAATCATTTTCAAGTTCAGCTCAAGCTTGGACAAAAGCTGGATCTTCGTTGAGAAAATCTTCCACAAATCACAGGGCTGAATTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTGGATCTTTTAAAGCTAGGGGATCCTCAAACTCCTCGCATACAGGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCACACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAACAGGTATGATAGATTGGCCTTGGTGCGCTGTAACATTACAAGCCTAAACCTGACTTCTGAAACGGATTCTGAATTTAACCCTTCGATGAAAGTATCTTATCTTATCGGTTCTCGACCCTTTTGGCGGTTTGCTCTGCATATATCAAGGGTTTCAGAAAAATTATTTCCTTTAGTTGTGTAATGATCTCTATGATCTTTTATTGTGGCTCTTTTTTTTCCCCTTGTTTTCTTTCCTTTTGGATCATCAGAAAAATCTTCACAGGTTGTGGTTTTGGGTGGTTTTCTTTTCTATACGGTTGAAACTTGTAATGAAACCTGAATCTTATATACCATGCTTACTCTGTGGCCTTCGTCAAAA

Coding sequence (CDS)

ATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCGGCACGCCGATCGAAGGGTTTGGCCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAGTTGAGCGCAAAATATTCTTGCGCGACAGGAAGATAAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGGCGGCTTGAGAAACTTCAGCGTGCTCCATCTGGCCAGTTTCAAGATTCAGATGTTGCAGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAGTATGTAGCTTTATTTACCGGAAGTGATGATTCAGACATGGTTGATAGGAGAAAGAAGTTACGTGAGCAGATTAAAGCCAATTTGATTGCTGCGGCGGCTAGTGGAAAGGATTTAGAAGAGACCGGTAGTGAGGATGATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGGAACAAGCTTCCAGTACTTCCGGCAAAGCAGCATCCGGCATGTCTAGTGATGAAAAAAAAATTCATCAGAGGCAGATTTCTGCCAGAGCCTTGATGCCTCCTCCTCGTCCTACCAAATCATTTTCAAGTTCAGCTCAAGCTTGGACAAAAGCTGGATCTTCGTTGAGAAAATCTTCCACAAATCACAGGGCTGAATTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTGGATCTTTTAAAGCTAGGGGATCCTCAAACTCCTCGCATACAGGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCACACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAACAGGTATGA

Protein sequence

MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKKIHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV*

Homology

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BLAST of MELO3C006479T2 vs. Swiss-Prot
Match: EFG1P_SCHPO (rRNA-processing protein efg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=efg1 PE=3 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 8.7e-14
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 1


Query: 25  KKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDR 84
           K P    LK +IR  ER+L+K NLPA +R   E+ L GL++Q  +      ++KIF R +
Sbjct: 5   KGPGLSVLKKKIRDNERLLKKENLPANIRVEHERALLGLQEQLSMAQLEHKKQKIFERYK 64

Query: 85  KIKFFERRKIERRIRRLEK-LQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVAL 144
           K++FFER+K ERRI++LEK L+       +       + K + DL Y++ +P   KYV+L
Sbjct: 65  KVRFFERKKAERRIKQLEKSLKDETMDDEKRKQCEKSMRKCQIDLMYIKEYPPLTKYVSL 124

Query: 145 FTGSDDSDMVDRRKKL 159
           +         + R ++
Sbjct: 125 YAEGTSEQTEETRNRI 140

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BLAST of MELO3C006479T2 vs. Swiss-Prot
Match: EFG1P_CANAL (rRNA-processing protein EFG1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CaO19.11461 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.3e-11
Identity = 63/230 (27.39%), Postives = 109/230 (47.39%), Query Frame = 1


Query: 17  RSKGLAVEKKPK----SVSLKNQIRSAERMLRKN--LPAEVRDAQEKKLEGLRKQQEIHS 76
           RS+G  ++        S  +K +IR  ER+++KN  LPA+ +   ++ L+GL+ + + +S
Sbjct: 14  RSRGAPIQVAESIGSGSAKIKKKIRDIERLIKKNPNLPADKKIEYDRALKGLKVELQ-NS 73

Query: 77  RLAVERKIFLRD-RKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQLSKLKE---D 136
           ++  + K+  +    ++FFER+K  R+++ L K     S      D+     +L+    D
Sbjct: 74  QVQNKAKVLAKKYHMVRFFERKKAVRKLKNLRKEFERISQTGIRKDIKKARKQLRHGEID 133

Query: 137 LEYVRFFPKTEKYVALFTGSDDSDMVD------------RRKKLREQIKANLIAAAASGK 196
           L YV  FPKTEKY++L+   +D D  D            RR++ R+ I+          K
Sbjct: 134 LAYVILFPKTEKYISLYPSPNDEDQTDPNVIKGLKITEERRREFRKYIE----------K 193

Query: 197 DLEE---TGSEDDGLLDMS---EDDFFLCGSSSDEADADDEWTDKSTREQ 219
            +EE     S DD L   +   ++D       ++E DA ++  D+   EQ
Sbjct: 194 LMEEGKLPFSIDDALQGKNIRLDNDKTQKAVLTEEIDAPEQKQDEQQEEQ 232

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BLAST of MELO3C006479T2 vs. Swiss-Prot
Match: EFG1P_COPC7 (rRNA-processing protein EFG1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=EFG1 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-10
Identity = 36/118 (30.51%), Postives = 67/118 (56.78%), Query Frame = 1


Query: 27  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKI 86
           P    +K+ +R   R+L K NL A+ R   E++L+ L  + +   +   ER + +R  K+
Sbjct: 38  PGKQKIKSSLRQVRRLLAKENLAADKRVEAERRLKALEAELQQVEQAHKERALAIRYHKV 97

Query: 87  KFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQLSKLKEDLEYVRFFPKTEKYVALF 144
           KFFER+K+ R++ ++++   +  G  +   +  QL + + +L Y+  +PKT+KY++LF
Sbjct: 98  KFFERQKVTRKLNQVKRRLDSADGS-EKEQLEAQLLEERVNLNYILHYPKTKKYISLF 154

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BLAST of MELO3C006479T2 vs. Swiss-Prot
Match: EFG1P_CRYNB (rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=EFG1 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.9e-10
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 1


Query: 13  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSR 72
           PA     G  +   P    LK+ IR  +R+L K NL   +R + +++L  L        R
Sbjct: 40  PATEARDGAGI---PGLSKLKSSIRQTKRLLAKENLEPGLRVSTQRRLTSLEADLAAAER 99

Query: 73  LAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDVADQLSKLKEDLEYV 132
             VERK   +  K+KFFER+K+ R I+R + KL  + +   + S   ++L   +  L YV
Sbjct: 100 REVERKNGAKYHKVKFFERQKLVRLIKRFKRKLLDSETSSKKRSKHEEELLDARIMLNYV 159

Query: 133 RFFPKTEKYVALF------TGSDDSDMVDRRKKLR 160
             +P T+KY++LF      T  +D D    + KL+
Sbjct: 160 LHYPNTQKYISLFPSNPNQTEDEDDDDDSSKPKLK 191

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BLAST of MELO3C006479T2 vs. Swiss-Prot
Match: EFG1P_CRYNJ (rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=EFG1 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.9e-10
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 1


Query: 13  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSR 72
           PA     G  +   P    LK+ IR  +R+L K NL   +R + +++L  L        R
Sbjct: 40  PATEARDGAGI---PGLSKLKSSIRQTKRLLAKENLEPGLRVSTQRRLTSLEADLAAAER 99

Query: 73  LAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDVADQLSKLKEDLEYV 132
             VERK   +  K+KFFER+K+ R I+R + KL  + +   + S   ++L   +  L YV
Sbjct: 100 REVERKNGAKYHKVKFFERQKLVRLIKRFKRKLLDSETSSKKRSKHEEELLDARIMLNYV 159

Query: 133 RFFPKTEKYVALF------TGSDDSDMVDRRKKLR 160
             +P T+KY++LF      T  +D D    + KL+
Sbjct: 160 LHYPNTQKYISLFPSNPNQTEDEDDDDDSSKPKLK 191

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BLAST of MELO3C006479T2 vs. TrEMBL
Match: A0A0A0L7B4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143600 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 1.2e-179
Identity = 329/335 (98.21%), Postives = 331/335 (98.81%), Query Frame = 1


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKKIHQR 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK  HQR
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKN-HQR 240

Query: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARG 300
           QISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRSGSFKARG
Sbjct: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARG 300

Query: 301 SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 336
           SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 334

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BLAST of MELO3C006479T2 vs. TrEMBL
Match: A5BK56_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020767 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 1.2e-142
Identity = 275/340 (80.88%), Postives = 304/340 (89.41%), Query Frame = 1


Query: 1   MAHGGYGKRRV---NPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEK 60
           MAHGGYGKRRV    P +RRSKGLAV+KKPKSVSLKNQIRS ER+LRKNLP E+R+AQEK
Sbjct: 1   MAHGGYGKRRVAERKPESRRSKGLAVDKKPKSVSLKNQIRSTERILRKNLPPEMREAQEK 60

Query: 61  KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVA 120
           KLEGL+KQQEIH+RLAVERKIFLRDRKIKFFERRKIERRIRRLEK QRA SGQ Q+++VA
Sbjct: 61  KLEGLKKQQEIHTRLAVERKIFLRDRKIKFFERRKIERRIRRLEKQQRAASGQAQEAEVA 120

Query: 121 DQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE 180
           +QLSKLKEDLEYVRFFPKTEKYV+LF G DD+D+VDRR +LR+QIKAN+IAAAASGKDLE
Sbjct: 121 EQLSKLKEDLEYVRFFPKTEKYVSLFIGGDDTDIVDRRNRLRKQIKANIIAAAASGKDLE 180

Query: 181 ETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKKI 240
           ETGSEDDGLLD+SEDDFFL GSSSDEADADDEWTDKSTREQASS SGKAASGMSSDE+  
Sbjct: 181 ETGSEDDGLLDLSEDDFFLSGSSSDEADADDEWTDKSTREQASSASGKAASGMSSDER-- 240

Query: 241 HQRQISARALMPPPRPT-KSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSG-S 300
           +Q+QISARALMPPPRP+  SFSSSA+  ++ G+S  K+S+  RAE STS NTS  RSG S
Sbjct: 241 NQKQISARALMPPPRPSANSFSSSARTKSRFGASSSKNSSIRRAEMSTSRNTSNSRSGYS 300

Query: 301 FKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 336
           FK R SS SS TG SSN+SSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 FKNRESS-SSRTGHSSNLSSNSDAHKPRRKRRPKKKKQQV 337

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BLAST of MELO3C006479T2 vs. TrEMBL
Match: D7T782_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04640 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.5e-142
Identity = 275/339 (81.12%), Postives = 303/339 (89.38%), Query Frame = 1


Query: 1   MAHGGYGKRRV---NPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEK 60
           MAHGGYGKRRV    P +RRSKGLAVEKKPKSVSLKNQIRS ER+LRKNLP E+R+AQEK
Sbjct: 1   MAHGGYGKRRVAERKPESRRSKGLAVEKKPKSVSLKNQIRSTERILRKNLPPEMREAQEK 60

Query: 61  KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVA 120
           KLEGL+KQQEIH+RLAVERKIFLRDRKIKFFERRKIERRIRRLEK QRA SGQ Q+++VA
Sbjct: 61  KLEGLKKQQEIHTRLAVERKIFLRDRKIKFFERRKIERRIRRLEKQQRAASGQAQEAEVA 120

Query: 121 DQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE 180
           +QLSKLKEDLEYVRFFPKTEKYV+LF G DD+D+VDRR +LR+QIKAN+IAAAASGKDLE
Sbjct: 121 EQLSKLKEDLEYVRFFPKTEKYVSLFIGGDDTDIVDRRNRLRKQIKANIIAAAASGKDLE 180

Query: 181 ETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKKI 240
           ETGSEDDGLLD+SEDDFFL GSSSDEADADDEWTDKSTREQASS SGKAASGMSSDE+  
Sbjct: 181 ETGSEDDGLLDLSEDDFFLSGSSSDEADADDEWTDKSTREQASSASGKAASGMSSDER-- 240

Query: 241 HQRQISARALMPPPRPT-KSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSG-S 300
           +Q+QISARALMPPPRP+  SFSSSA+  ++ G+S  K+S+  RAE STS NTS  RSG S
Sbjct: 241 NQKQISARALMPPPRPSANSFSSSARTKSRFGASSSKNSSIRRAEMSTSRNTSNSRSGYS 300

Query: 301 FKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ 335
           FK R SS SS TG SSN+SSNSDAHKPRRKRRPKKKKQQ
Sbjct: 301 FKNRESS-SSRTGHSSNLSSNSDAHKPRRKRRPKKKKQQ 336

[Close]

BLAST of MELO3C006479T2 vs. TrEMBL
Match: V4U274_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005381mg PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 5.5e-140
Identity = 276/341 (80.94%), Postives = 300/341 (87.98%), Query Frame = 1


Query: 1   MAHGGYGKRRV---NPAARRSKGLAVEKKPK--SVSLKNQIRSAERMLRKNLPAEVRDAQ 60
           MAHGGYGKRR+    P  RRSKGLAVEKKPK  SVSLKNQIRS ERMLRK LPAEVR+AQ
Sbjct: 1   MAHGGYGKRRLAERKPVGRRSKGLAVEKKPKPKSVSLKNQIRSVERMLRKELPAEVREAQ 60

Query: 61  EKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSD 120
           +KKLE L+KQQEIH+RLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR  SGQ QD  
Sbjct: 61  QKKLEELKKQQEIHTRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRTSSGQAQD-- 120

Query: 121 VADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKD 180
            A+QLSKLKEDLEYVRFFPKTEKYV+LFTG DDSD+VDRR +LR+QIKANLIAAAASGKD
Sbjct: 121 -AEQLSKLKEDLEYVRFFPKTEKYVSLFTGGDDSDIVDRRNRLRKQIKANLIAAAASGKD 180

Query: 181 LEETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK 240
           LEETGSEDDGLLD+S+DDFFL GSSSDEADADDEWTDKSTREQASS SGKAASGMSSDE+
Sbjct: 181 LEETGSEDDGLLDLSDDDFFLTGSSSDEADADDEWTDKSTREQASSASGKAASGMSSDER 240

Query: 241 KIHQRQISARALMPPPRP-TKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS- 300
             +QRQ SARALMPPPRP T +F SS Q+ ++ GSS RK+S+  RAE STSSNTS  RS 
Sbjct: 241 --NQRQNSARALMPPPRPSTNTFPSSVQSQSRFGSSSRKNSSIQRAEMSTSSNTSSSRSE 300

Query: 301 GSFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ 335
            SF+ARGSSN+  TG SSN+SSNSDAHKPRRKRRPKKKKQ+
Sbjct: 301 SSFRARGSSNTI-TGHSSNLSSNSDAHKPRRKRRPKKKKQK 335

[Close]

BLAST of MELO3C006479T2 vs. TrEMBL
Match: A0A067EJ45_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019593mg PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 5.5e-140
Identity = 276/341 (80.94%), Postives = 300/341 (87.98%), Query Frame = 1


Query: 1   MAHGGYGKRRV---NPAARRSKGLAVEKKPK--SVSLKNQIRSAERMLRKNLPAEVRDAQ 60
           MAHGGYGKRR+    P  RRSKGLAVEKKPK  SVSLKNQIRS ERMLRK LPAEVR+AQ
Sbjct: 1   MAHGGYGKRRLAERKPVGRRSKGLAVEKKPKPKSVSLKNQIRSVERMLRKELPAEVREAQ 60

Query: 61  EKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSD 120
           +KKLE L+KQQEIH+RLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR  SGQ QD  
Sbjct: 61  QKKLEELKKQQEIHTRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRTSSGQAQD-- 120

Query: 121 VADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKD 180
            A+QLSKLKEDLEYVRFFPKTEKYV+LFTG DDSD+VDRR +LR+QIKANLIAAAASGKD
Sbjct: 121 -AEQLSKLKEDLEYVRFFPKTEKYVSLFTGGDDSDIVDRRNRLRKQIKANLIAAAASGKD 180

Query: 181 LEETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK 240
           LEETGSEDDGLLD+S+DDFFL GSSSDEADADDEWTDKSTREQASS SGKAASGMSSDE+
Sbjct: 181 LEETGSEDDGLLDLSDDDFFLTGSSSDEADADDEWTDKSTREQASSASGKAASGMSSDER 240

Query: 241 KIHQRQISARALMPPPRP-TKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS- 300
             +QRQ SARALMPPPRP T +F SS Q+ ++ GSS RK+S+  RAE STSSNTS  RS 
Sbjct: 241 --NQRQNSARALMPPPRPSTNTFPSSVQSQSRFGSSSRKNSSIQRAEMSTSSNTSNSRSE 300

Query: 301 GSFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ 335
            SF+ARGSSN+  TG SSN+SSNSDAHKPRRKRRPKKKKQ+
Sbjct: 301 SSFRARGSSNTI-TGHSSNLSSNSDAHKPRRKRRPKKKKQK 335

[Close]

BLAST of MELO3C006479T2 vs. TAIR10
Match: AT5G43720.1 (AT5G43720.1 Protein of unknown function (DUF2361))

HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-113
Identity = 222/343 (64.72%), Postives = 267/343 (77.84%), Query Frame = 1


Query: 1   MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDA 60
           MAHGGY KRR +       ++RRSK L VEKKPK+VS+KNQ+RS ER LRK+LP EVR++
Sbjct: 1   MAHGGYAKRRDSEPKQTAGSSRRSKVLRVEKKPKTVSIKNQMRSVERFLRKDLPPEVRES 60

Query: 61  QEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDS 120
             +KLE L+KQQ+ H+RLAVERKIF R+RKIKFFERRKIER IRRLEKLQR  S    D 
Sbjct: 61  LVEKLEDLKKQQDAHARLAVERKIFFRNRKIKFFERRKIERSIRRLEKLQRTSSAHVGDV 120

Query: 121 DVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGK 180
           D+A+QLSKLKEDLEYVRFFPK EKYV+LFTG++DS+++++R K+R+QIKAN+I AAASGK
Sbjct: 121 DIAEQLSKLKEDLEYVRFFPKNEKYVSLFTGAEDSEVIEKRGKMRQQIKANIIVAAASGK 180

Query: 181 DLEETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDE 240
           +LEETGSEDDGLLD+S+DDFF  GSSSDEADADDE TDKS +E ASS SG+A SGMSSDE
Sbjct: 181 ELEETGSEDDGLLDLSDDDFFDKGSSSDEADADDELTDKSAKEAASSASGRATSGMSSDE 240

Query: 241 KKIHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSS--NTSGGR 300
           +  +Q+Q S RALMPPP+             +  S+ RK+    R E  +SS  NTS  R
Sbjct: 241 R--NQKQNSDRALMPPPQ------------ARFESNSRKNLYVQRNEMPSSSRNNTSNRR 300

Query: 301 S-GSFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ 335
           S  S+ AR S+ +S++ QSSN+SSNSDAHKP+RKRRPKKKKQQ
Sbjct: 301 SESSYNARASAANSYSSQSSNLSSNSDAHKPKRKRRPKKKKQQ 329

[Close]

BLAST of MELO3C006479T2 vs. TAIR10
Match: AT1G04230.1 (AT1G04230.1 Protein of unknown function (DUF2361))

HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-113
Identity = 221/341 (64.81%), Postives = 262/341 (76.83%), Query Frame = 1


Query: 1   MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDA 60
           MAHGGY +RRV         +RRSKGL VEKKPK+ SLKNQIRS  RM+RK+LP EVR+A
Sbjct: 1   MAHGGYARRRVAERKTTAGTSRRSKGLRVEKKPKNSSLKNQIRSIGRMIRKDLPPEVREA 60

Query: 61  QEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQF-QD 120
            EKKL+ L+KQQ+IH RLA ERKIFLR+RK++FFERRKIER IRRLEKL R+ SG + QD
Sbjct: 61  LEKKLDDLKKQQDIHFRLAFERKIFLRNRKVRFFERRKIERSIRRLEKLHRSTSGGYVQD 120

Query: 121 SDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASG 180
           +++  QL++LKEDLEYVRFFPK EKYV+LF+GSDD  + +RR KLR+QIKAN+I AAASG
Sbjct: 121 AEIGGQLNRLKEDLEYVRFFPKNEKYVSLFSGSDDLQVSERRSKLRKQIKANIIFAAASG 180

Query: 181 KDLEETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSD 240
           K+LEETGSEDD LLD+S+DDFF+ GSSSDEADADDEWTDKST+E  SS SG+A S MSSD
Sbjct: 181 KELEETGSEDDALLDLSDDDFFVNGSSSDEADADDEWTDKSTKEPVSSASGRATSSMSSD 240

Query: 241 EKKIHQRQISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRS 300
           E+  +Q+  S R LMPPPR            ++  S+ R+ S+  R E  +SSNTS  RS
Sbjct: 241 ER--NQKPYSTRVLMPPPR------------SRFASTSRQYSSVKRNEIPSSSNTSHRRS 300

Query: 301 GSFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ 335
            S  A   + SSHT QSSN+SSNSDAHKP+RKRRPKKKK Q
Sbjct: 301 QSSHA---ATSSHTSQSSNLSSNSDAHKPKRKRRPKKKKLQ 324

[Close]

BLAST of MELO3C006479T2 vs. NCBI nr
Match: gi|659076274|ref|XP_008438591.1| (PREDICTED: rRNA-processing protein EFG1-like [Cucumis melo])

HSP 1 Score: 639.0 bits (1647), Expect = 4.5e-180
Identity = 332/335 (99.10%), Postives = 332/335 (99.10%), Query Frame = 1


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKKIHQR 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK I  R
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKII--R 240

Query: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARG 300
           QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARG
Sbjct: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARG 300

Query: 301 SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 336
           SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 333

[Close]

BLAST of MELO3C006479T2 vs. NCBI nr
Match: gi|449432634|ref|XP_004134104.1| (PREDICTED: rRNA-processing protein EFG1 isoform X1 [Cucumis sativus])

HSP 1 Score: 637.1 bits (1642), Expect = 1.7e-179
Identity = 329/335 (98.21%), Postives = 331/335 (98.81%), Query Frame = 1


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKKIHQR 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK  HQR
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKN-HQR 240

Query: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARG 300
           QISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRSGSFKARG
Sbjct: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARG 300

Query: 301 SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 336
           SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 334

[Close]

BLAST of MELO3C006479T2 vs. NCBI nr
Match: gi|778678331|ref|XP_011650949.1| (PREDICTED: rRNA-processing protein EFG1 isoform X2 [Cucumis sativus])

HSP 1 Score: 629.4 bits (1622), Expect = 3.6e-177
Identity = 326/335 (97.31%), Postives = 328/335 (97.91%), Query Frame = 1


Query: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60
           MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120
           GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQL 120

Query: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKKIHQR 240
           SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK     
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK---NH 240

Query: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARG 300
           QISARALMPPPRPTKSFSSSAQAWTKAGSS+RKSSTNHRAEFSTSSNTSGGRSGSFKARG
Sbjct: 241 QISARALMPPPRPTKSFSSSAQAWTKAGSSVRKSSTNHRAEFSTSSNTSGGRSGSFKARG 300

Query: 301 SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 336
           SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 332

[Close]

BLAST of MELO3C006479T2 vs. NCBI nr
Match: gi|147791158|emb|CAN74699.1| (hypothetical protein VITISV_020767 [Vitis vinifera])

HSP 1 Score: 514.2 bits (1323), Expect = 1.7e-142
Identity = 275/340 (80.88%), Postives = 304/340 (89.41%), Query Frame = 1


Query: 1   MAHGGYGKRRV---NPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEK 60
           MAHGGYGKRRV    P +RRSKGLAV+KKPKSVSLKNQIRS ER+LRKNLP E+R+AQEK
Sbjct: 1   MAHGGYGKRRVAERKPESRRSKGLAVDKKPKSVSLKNQIRSTERILRKNLPPEMREAQEK 60

Query: 61  KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVA 120
           KLEGL+KQQEIH+RLAVERKIFLRDRKIKFFERRKIERRIRRLEK QRA SGQ Q+++VA
Sbjct: 61  KLEGLKKQQEIHTRLAVERKIFLRDRKIKFFERRKIERRIRRLEKQQRAASGQAQEAEVA 120

Query: 121 DQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE 180
           +QLSKLKEDLEYVRFFPKTEKYV+LF G DD+D+VDRR +LR+QIKAN+IAAAASGKDLE
Sbjct: 121 EQLSKLKEDLEYVRFFPKTEKYVSLFIGGDDTDIVDRRNRLRKQIKANIIAAAASGKDLE 180

Query: 181 ETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKKI 240
           ETGSEDDGLLD+SEDDFFL GSSSDEADADDEWTDKSTREQASS SGKAASGMSSDE+  
Sbjct: 181 ETGSEDDGLLDLSEDDFFLSGSSSDEADADDEWTDKSTREQASSASGKAASGMSSDER-- 240

Query: 241 HQRQISARALMPPPRPT-KSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSG-S 300
           +Q+QISARALMPPPRP+  SFSSSA+  ++ G+S  K+S+  RAE STS NTS  RSG S
Sbjct: 241 NQKQISARALMPPPRPSANSFSSSARTKSRFGASSSKNSSIRRAEMSTSRNTSNSRSGYS 300

Query: 301 FKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV 336
           FK R SS SS TG SSN+SSNSDAHKPRRKRRPKKKKQQV
Sbjct: 301 FKNRESS-SSRTGHSSNLSSNSDAHKPRRKRRPKKKKQQV 337

[Close]

BLAST of MELO3C006479T2 vs. NCBI nr
Match: gi|359477597|ref|XP_002284076.2| (PREDICTED: rRNA-processing protein EFG1 isoform X1 [Vitis vinifera])

HSP 1 Score: 513.8 bits (1322), Expect = 2.2e-142
Identity = 275/339 (81.12%), Postives = 303/339 (89.38%), Query Frame = 1


Query: 1   MAHGGYGKRRV---NPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEK 60
           MAHGGYGKRRV    P +RRSKGLAVEKKPKSVSLKNQIRS ER+LRKNLP E+R+AQEK
Sbjct: 1   MAHGGYGKRRVAERKPESRRSKGLAVEKKPKSVSLKNQIRSTERILRKNLPPEMREAQEK 60

Query: 61  KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVA 120
           KLEGL+KQQEIH+RLAVERKIFLRDRKIKFFERRKIERRIRRLEK QRA SGQ Q+++VA
Sbjct: 61  KLEGLKKQQEIHTRLAVERKIFLRDRKIKFFERRKIERRIRRLEKQQRAASGQAQEAEVA 120

Query: 121 DQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE 180
           +QLSKLKEDLEYVRFFPKTEKYV+LF G DD+D+VDRR +LR+QIKAN+IAAAASGKDLE
Sbjct: 121 EQLSKLKEDLEYVRFFPKTEKYVSLFIGGDDTDIVDRRNRLRKQIKANIIAAAASGKDLE 180

Query: 181 ETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKKI 240
           ETGSEDDGLLD+SEDDFFL GSSSDEADADDEWTDKSTREQASS SGKAASGMSSDE+  
Sbjct: 181 ETGSEDDGLLDLSEDDFFLSGSSSDEADADDEWTDKSTREQASSASGKAASGMSSDER-- 240

Query: 241 HQRQISARALMPPPRPT-KSFSSSAQAWTKAGSSLRKSSTNHRAEFSTSSNTSGGRSG-S 300
           +Q+QISARALMPPPRP+  SFSSSA+  ++ G+S  K+S+  RAE STS NTS  RSG S
Sbjct: 241 NQKQISARALMPPPRPSANSFSSSARTKSRFGASSSKNSSIRRAEMSTSRNTSNSRSGYS 300

Query: 301 FKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ 335
           FK R SS SS TG SSN+SSNSDAHKPRRKRRPKKKKQQ
Sbjct: 301 FKNRESS-SSRTGHSSNLSSNSDAHKPRRKRRPKKKKQQ 336

The following BLAST results are available for this feature:

BLAST of MELO3C006479T2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EFG1P_SCHPO	8.7e-14	35.29	rRNA-processing protein efg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
EFG1P_CANAL	5.3e-11	27.39	rRNA-processing protein EFG1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)...	[more]
EFG1P_COPC7	2.6e-10	30.51	rRNA-processing protein EFG1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / AT...	[more]
EFG1P_CRYNB	9.9e-10	31.61	rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype...	[more]
EFG1P_CRYNJ	9.9e-10	31.61	rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype...	[more]

BLAST of MELO3C006479T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7B4_CUCSA	1.2e-179	98.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143600 PE=4 SV=1	[more]
A5BK56_VITVI	1.2e-142	80.88	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020767 PE=4 SV=1	[more]
D7T782_VITVI	1.5e-142	81.12	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04640 PE=4 SV=...	[more]
V4U274_9ROSI	5.5e-140	80.94	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005381mg PE=4 SV=1	[more]
A0A067EJ45_CITSI	5.5e-140	80.94	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019593mg PE=4 SV=1	[more]

BLAST of MELO3C006479T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43720.1	1.7e-113	64.72	Protein of unknown function (DUF2361)	[more]
AT1G04230.1	2.3e-113	64.81	Protein of unknown function (DUF2361)	[more]

BLAST of MELO3C006479T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076274\|ref\|XP_008438591.1\|	4.5e-180	99.10	PREDICTED: rRNA-processing protein EFG1-like [Cucumis melo]	[more]
gi\|449432634\|ref\|XP_004134104.1\|	1.7e-179	98.21	PREDICTED: rRNA-processing protein EFG1 isoform X1 [Cucumis sativus]	[more]
gi\|778678331\|ref\|XP_011650949.1\|	3.6e-177	97.31	PREDICTED: rRNA-processing protein EFG1 isoform X2 [Cucumis sativus]	[more]
gi\|147791158\|emb\|CAN74699.1\|	1.7e-142	80.88	hypothetical protein VITISV_020767 [Vitis vinifera]	[more]
gi\|359477597\|ref\|XP_002284076.2\|	2.2e-142	81.12	PREDICTED: rRNA-processing protein EFG1 isoform X1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR019310	Efg1

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006479	MELO3C006479	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006479T2	MELO3C006479T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006479T2.cds8	MELO3C006479T2.cds8	CDS
MELO3C006479T2.cds7	MELO3C006479T2.cds7	CDS
MELO3C006479T2.cds6	MELO3C006479T2.cds6	CDS
MELO3C006479T2.cds5	MELO3C006479T2.cds5	CDS
MELO3C006479T2.cds4	MELO3C006479T2.cds4	CDS
MELO3C006479T2.cds3	MELO3C006479T2.cds3	CDS
MELO3C006479T2.cds2	MELO3C006479T2.cds2	CDS
MELO3C006479T2.cds1	MELO3C006479T2.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019310	rRNA-processing protein Efg1	PFAM	PF10153	DUF2361	coord: 32..143 score: 1.0
None	No IPR available	PANTHER	PTHR33911	FAMILY NOT NAMED	coord: 1..261 score: 5.8E-91coord: 282..330 score: 5.8
None	No IPR available	PANTHER	PTHR33911:SF1	RRNA-PROCESSING PROTEIN EFG1	coord: 1..261 score: 5.8E-91coord: 282..330 score: 5.8