MELO3C006160.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCAGAAGTTGAAACTTGAAGAATACTTCGAGAGAAATGGCGGGAGAAGCTGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGCAACTCATGCTCCTCCTCGTCCTCGTTTGGAGCCTGTTGATCGAGAAAAGGTTTCTCTCTTTCTCTTCTCTATTTTTAGGGTTTCTAATTCTATCCCTTCTAGCGTTGTCTCTGATTTTCAATTTTGGTGTTCATTAGCTTGTTCTTGAATCCACATTCAGATCAATCGTTTTCTTATTTATTTGTTCTAGAATTTCGTTGGAATCTCTTTATTTTGGTGCTTGTTACTTGAATCTCCGATTATTGCATTTTCGCTGCTCGTAGTGTTCGGAGCTGGCTGTGTAAATATAGATAGCAACTTTCATTCTCTATGTTGAGTAATTTCCTTTCTATTGCTGCAGACTTGTCCTTTGCTGCTTCGCGTTTTCACGAAGGTACGTCGTTTTTTTATGCTGGGTTTTGTTTTTGTGGATTTTGTTCCATATCTATTCAAAGTACCCAAAACAAGTGTGTTTCATCGACCTGGGAACCGTAGTTTAATCCAACCGATGTATTAGGGATGAAATGAAGTGCGTTGGGTGTCGAATTTGTGTGAAATGTTCGAATTTATGCCATTGTGTTGATAGATGGGGTTTAGGAATCTGATTAGAGGATAACTTAAAGCAAATTTCCGTGGTTTCGGGTGGCTACATTTAGGTTATGAGGAGTCTGGTTCTAAATAATGCTACACTTGGATAAGGAAGGGTAATATTGCTGTTTATTTTTTTTCTTTTCATATTTTTGGTAGATTGGGAGTCATCATTTCAATGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAACTAACTGATCTGGTTGTATTTCTTATTCCTTTTTAACCTCTTCTCCCTCCACGCTTTGCATGACATAAATGCGACTGATCTGTATCTTTTTTAATGTATATCCATGATGCATTCGTAGAAACTATTTTCCATTTCATTGCTCCTTGATCTCATGTGTCTACTTTTCTTTCCATTTTGGGTGAGGGAGTTTACAGGTCAAAGAGGTAGCTCCAGAAGCCAGGAGGAGAAATGCTAAACTTTCCTTTGCTTTGGTTTATCCCGATAGACATGGTCGGTTTGTATTGAGAGAGGTGTATATTTTCTCTTCCCTTCTCCCACATATGTCATGCATATACACATATAATACAATGTTTTTAGGATGAACTAGGGAAACATTCTTGACACTTTTCTTTTTTACTTAGTTAAGTTTATCAATTTGAGCACCCAAGTTGAATAAGTGGTAAAATGAATTAATGCTGAACTGAAATCTTTTGTTCTAACCATACTGTCATCATGTCCTGCTGTAACTTGCAGTTTCTTTAGCCGCAAAGATTTTTCTGTGTAAAGGGCTTAAGTACGTGATATACTCGAATCCGTAATAAATTTCCCAGAATTCATTGACCTCATCTGTAATTTACGTTTACAAATATATGAAGAAAGCGAATTTCGAGTTCTATAGTAGATATGACTAGTTACCATTTTGGAGGTTGATGGTTTGTTCTTCATCCATCTAATTGTTGTGGTGTGGATCCCTCATCAAACACATGGATTACTATTCTCATTCACAACTAATTTTGCGATAGAATCTTATATTTATCTAATTATTTATCATATCTTAGGAAGCCTAAATGAATATTTGGTCTAAATCATTGAGGGGTATGTGAGGATCTCATCCCATGTGGGACAAACGAAGAAATCTCATCATCTTTACTTGATACATTTTCTCATTACCCGTTGGTTTGAGGATAGAAATACATGCTTATGTAATGTATTGAACTAAAAAAAACTAGCTTGAGTCATACAGATTCTGTTTCTTCATTTGAAGGTAGGGAAGACATTCTCGTTTGGAAATAGACGATTAGACGATAGCTTGGCTTTGGGAGAACTTGGTTTTCAGGTAAAACAAAGCATGGCTTTCTTTTTTGCCTTATCAATCCTGTATTCCTTATCAAACTTGGTGCAATTCTTCCCACGCAGATTGGAGATTACTTGGACGTGGCAATCATATAGGGTATGTGGTGCGTTTATATACTAATAATTTGCCTATGGTGAAGAACAAAAAGAATGAGGATATTAACTTCAATCTTGTAATGTATATTCCATTTAAGAATTGGTCGAAAATCCTTTACCTTGTATGTTTTCTTCCCCTGTGCCATATGAGGTAGATCGTGATAGTCATTGTCACGTTCCTTTGAGTTACCTTCTTGATGTATTGCATCAGATGAACCGGGCCATATAATAGAGTTTTCGTTGGGACGATAATGGTGGAACTATTTTAGGCCCTATGGTTTCATTAACATGAGTTTTTCTTTACAAAAATCAAAGTCTTTGTTGCATGCGTT GGCAGAAGTTGAAACTTGAAGAATACTTCGAGAGAAATGGCGGGAGAAGCTGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGCAACTCATGCTCCTCCTCGTCCTCGTTTGGAGCCTGTTGATCGAGAAAAGACTTGTCCTTTGCTGCTTCGCGTTTTCACGAAGATTGGGAGTCATCATTTCAATGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAACTAACTGATCTGGTCAAAGAGGTAGCTCCAGAAGCCAGGAGGAGAAATGCTAAACTTTCCTTTGCTTTGGTTTATCCCGATAGACATGGTCGGTTTGTATTGAGAGAGGTAGGGAAGACATTCTCGTTTGGAAATAGACGATTAGACGATAGCTTGGCTTTGGGAGAACTTGGTTTTCAGATTGGAGATTACTTGGACGTGGCAATCATATAGGGTATGTGGTGCGTTTATATACTAATAATTTGCCTATGGTGAAGAACAAAAAGAATGAGGATATTAACTTCAATCTTGTAATGTATATTCCATTTAAGAATTGGTCGAAAATCCTTTACCTTGTATGTTTTCTTCCCCTGTGCCATATGAGGTAGATCGTGATAGTCATTGTCACGTTCCTTTGAGTTACCTTCTTGATGTATTGCATCAGATGAACCGGGCCATATAATAGAGTTTTCGTTGGGACGATAATGGTGGAACTATTTTAGGCCCTATGGTTTCATTAACATGAGTTTTTCTTTACAAAAATCAAAGTCTTTGTTGCATGCGTT ATGGCGGGAGAAGCTGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGCAACTCATGCTCCTCCTCGTCCTCGTTTGGAGCCTGTTGATCGAGAAAAGACTTGTCCTTTGCTGCTTCGCGTTTTCACGAAGATTGGGAGTCATCATTTCAATGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAACTAACTGATCTGGTCAAAGAGGTAGCTCCAGAAGCCAGGAGGAGAAATGCTAAACTTTCCTTTGCTTTGGTTTATCCCGATAGACATGGTCGGTTTGTATTGAGAGAGGTAGGGAAGACATTCTCGTTTGGAAATAGACGATTAGACGATAGCTTGGCTTTGGGAGAACTTGGTTTTCAGATTGGAGATTACTTGGACGTGGCAATCATATAG MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFSFGNRRLDDSLALGELGFQIGDYLDVAII
BLAST of MELO3C006160.2.1 vs. NCBI nr
Match: XP_008438121.1 (PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis melo]) HSP 1 Score: 273.5 bits (698), Expect = 4.3e-70 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. NCBI nr
Match: XP_004133896.1 (PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis sativus] >KGN56569.1 hypothetical protein Csa_3G124880 [Cucumis sativus]) HSP 1 Score: 271.6 bits (693), Expect = 1.6e-69 Identity = 135/148 (91.22%), Postives = 135/148 (91.22%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. NCBI nr
Match: XP_022147400.1 (histone deacetylase complex subunit SAP18 [Momordica charantia]) HSP 1 Score: 264.6 bits (675), Expect = 2.0e-67 Identity = 130/148 (87.84%), Postives = 133/148 (89.86%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. NCBI nr
Match: XP_022943948.1 (histone deacetylase complex subunit SAP18-like [Cucurbita moschata]) HSP 1 Score: 263.8 bits (673), Expect = 3.4e-67 Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. NCBI nr
Match: XP_022974173.1 (histone deacetylase complex subunit SAP18-like [Cucurbita maxima]) HSP 1 Score: 263.8 bits (673), Expect = 3.4e-67 Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. TAIR10
Match: AT2G45640.1 (SIN3 associated polypeptide P18) HSP 1 Score: 182.6 bits (462), Expect = 1.8e-46 Identity = 89/121 (73.55%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. Swiss-Prot
Match: sp|O64644|SAP18_ARATH (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2g45640 PE=1 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 3.3e-45 Identity = 89/121 (73.55%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. Swiss-Prot
Match: sp|Q3T022|SAP18_BOVIN (Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.3e-29 Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. Swiss-Prot
Match: sp|O00422|SAP18_HUMAN (Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.3e-29 Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. Swiss-Prot
Match: sp|Q5RDT5|SAP18_PONAB (Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.3e-29 Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. Swiss-Prot
Match: sp|O55128|SAP18_MOUSE (Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 4.3e-29 Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. TrEMBL
Match: tr|A0A1S3AVL4|A0A1S3AVL4_CUCME (histone deacetylase complex subunit SAP18 OS=Cucumis melo OX=3656 GN=LOC103483322 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.8e-70 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. TrEMBL
Match: tr|A0A0A0L6C9|A0A0A0L6C9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124880 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69 Identity = 135/148 (91.22%), Postives = 135/148 (91.22%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. TrEMBL
Match: tr|M5X2P5|M5X2P5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G150900 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 2.3e-56 Identity = 110/148 (74.32%), Postives = 121/148 (81.76%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. TrEMBL
Match: tr|W9S5P2|W9S5P2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_020767 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 8.9e-56 Identity = 119/148 (80.41%), Postives = 129/148 (87.16%), Query Frame = 0
BLAST of MELO3C006160.2.1 vs. TrEMBL
Match: tr|A0A2P5EI03|A0A2P5EI03_9ROSA (Sin3 associated polypeptide p OS=Trema orientalis OX=63057 GN=TorRG33x02_190110 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.5e-55 Identity = 105/123 (85.37%), Postives = 116/123 (94.31%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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