MELO3C006107T3 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006107T3
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	RNA polymerase I-specific transcription initiation factor RRN3
Location	chr6 : 1094852 .. 1102364 (+)
Sequence length	2397

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGCCGTTGGTCTCCTCTGCTCAGGTTATCACTTCTAAACCGTCCGTCTTCCTCTTCTCAATCTCTTCATCTTCTCACTTCTCAGTCGTCTGACTCATCTCCCTCTTGTAAATCCTTTATCTTCTCCTTCTATAACTTTATCATCCTTTCCTTTCCATCAACATTCAATCTTTTTTGTTTTAGGATTCTGTTTATCTCTTGGTAATCCATATACAGCTTCCCAATCGATTCTCCTTTCTACTTTTCTAACTTTTTTCCTTCATCTGATGCTTCCTTGCTGCTCTTCTTCATTCTGTTGTTTACGGGTTGGGTGGGGTTGTAAACTTAATTTTGTTCGGGTAAACCAACCCAACAAACACGAAAATCTGATGGCAAGGTGGTCTATTCACAGTGTCATGTGATGAGAATCGTTGTTGTTTCTGCGTTAGTTCATGTCTTCAAAAATTTTGTTTCGTGTTTTTGTTTTGATCAAAGCTCCGAAGCTAGCAAGTTTGCTCTCATTTTGATGATTATCTCGTTCTAATGTTTCTTTGAATTATTTATTTTTGTATGAATCAATTATTTTAACGATGTTCCTAATAAAATACTTCCTCATGTTTTCTGTAAACGAACCCTTTTCTTCCAGTTTGTTTTGAGTTTGACTTATCATGCACGAAGGAATGTTATTTACTTTTTATTTTCCCTAATTATTTTGTTTGAATCCTTTTTTCATCTGTCTTCATGTTTCAGGTTTGAATTTCATCCTGTTCCCAGCCCCCACTGTGACGATAGGATTTCAATAGGGGCCGGGCATTAATCATGGGGGCGGAACTGGAAAATAATCAGGCTCAGTTGCACGATATGGAGGATGTTAATCTCACAGATGCCCAGTTAGTTGATTTCATTAGGGGTTTTCTTAGTTCAGTGTCACTGGTATTATTCTCTTAAAATCATCATTGGTCTTTACTTAAATGAAAGATCATATAGCAATTGATTTTCGAAGTGCACTCTCGTAGTTTATTATTTGGGATGTGATTTTGAGTTCTCACTGCTAATCGAGTTGTTTTTTTGAGGAATAACTGTTGTAACCTTATGAAATCTCTTCCATTGGTGTAGGGAGATACTGATGGGTATAACCAGCTTGTTGGTGTTATACACCACAGAGATCGACTATCTCCCGACGAGGTTGCCTTGCTCGTGGTATGCCCTTTAGAACACATCTGTTTTTGACAAATGATAAGAGATTTAATTTCAGGTAAAATACTATCTAGTTTTTAACTCACTTGATGTGCTTAACAGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCATTCAACACGAATCTCTGCTTGCAGCAGTAAGTTTATGTCTAAACTCTGAGTCATTATCCTGCAATTTTGTTGTTGTAATGGAAGTTCTTTCTCAGATTTTTAAAATGAGCTTGTGGGATTATGGACCTAACGTGATGGATTCCCTGATTGAACTAATAATATCCCTGGTATGAGCATTTATGATAATAGTTTTCACTCTTTCTCTAGGCTCACCTAATAGTTCCAAGATCTTTTGACTTTTCTTTTCAATGTTTCAGGCTGTTTCAAATGGAAAATATGTGAATTCATGCTTGGATATGCTTGTAAATAACTTCATGCCGCCCAATTCCTACATGGATTTCCTGAAGAAACCACATGGTCTTACAAAAAAGGATGAAGTTCTTTCTCGAGTACACACAGCTCTAAAAGATATATCAGACCTGGTGCCTCTTGCACCCTTGAGATTGGAGCAGATAGTTGTCCATAAAATGCAAAGAGTCTTTTTCAAAGAATCTGTGAGTTGAACTTTCATGGACTAAAAGTTGCTTTAGAGAAATCTAAGTGAAAGTTGTGTTTATTATTCACTGAAGATTATATATATTTTATCTTTGTAGTGTTTTCCCAAAAAAGTATTGCTTATTTTGGTATTTTTTAAAATTATTTTTCTACCATTGTTTTCTTTTTTACGATCATCAATCCAATGACTATTGGAAGTTTGTTGTGAAGCTGAAAGCTCATTATCAGTTTGTATGCTTTGGCTTTGGCAAACTGAGGTATTAGATGACAAGGTTTATATCGTTACGAATTTAGAATACCCTACCAAATATAGTTCAAATTAGAACAATGCCTGGTAATGATTTATAGTTGAAATGCAGTGTAAATTTACTAGATGCTGCATTGGGTACAATCTCTGAATGTACGAACCCCTCTTAAATTTTTTGAATAAATATGTTCATATGATTCAAATAAATAGGTCAGTTAAAGAGTCAGGTACAAAGAAGATGGTTACATTTTTAGAAGCCCTGACCGAAATTTTTTACAGATGCCTTTTGCTTGCTTTGAGGAGAGAAATTGCTTTGATATATTTTTAAAACAATCTTTTAAAAGCTCAATGCCTATTTCACCTTCAAAACATTTGCGCTCTTTGTTAGGATTTTTTAAAAATAAATTATATATGTTTATGCGATTGCTTTATCATTAATATCTGTTTAATTCCTCTGTAGTTGACCACGATATATGTGGAAAACATGTTGAGGTTGGAAAAGGGTGCATTGAGTGAATTTGTTGGGAGAAAGATCTTAACTGCGCTGGTGGATAAGCTTCTAGATTTGGATGTAAGGGAACACAAATATTTTACGGCACATTTGTTTATGCGATTGCTTTATCATTAATATTAACTAGTTCTAACCTTCTGGTAGGTGGAGATTGGGTGGGATGATATTCTACAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGATGATGAAACTACAGATGATATTAATGAGGATTCTAGTGAGGTATGATATTCAATACCTAGGCTGGATTTAGAAGATTATTTCACTAAGTTGTAATGATATTTAATCTCTTTCGTAGTTTTTCTTCGTTTTGTTTTGGAGAAGAATCTCGAGGCTTATGCCTTAAGGCTCATCTATAGGCAAGACTTTACTCTTCAACTTTTGGCCTCAAGATTTACCCATTCGTTGAGTAAAAAAAAAAAGGCTTACCCATTGGTAAAAAGGCATTAGGGTAATGACTATAAGAACAATATTGATTAGGGTCATTCTTTTAAAATACAGAGGTTTGAGTTGTTAATTTGGACTACTACTACTTTTAGTTTTGTGACTCTAAAAACACTGAAGACGATAAATTTTAGTATAAGCCAATCCTGTTAATGATGATAGTAGTGATGTTATAAATATCATTTTAAAATATCTTTTTGTTTAAGTGGCAGTTGACGGGTTGAACTTTTTATACTTCAATATAACTATTATAGTACTATGTTTAACAATACGTGGATGCCACTTTTAGATTTGTAAAATGTTTTTAATTAACTTTGAGGTTTACACCTTGCCTTGAAGCTGATTGTCTTTTGGGTCTACAAAGTTTATACTCAAGCTGAGTCAGGTTTTTAAAATAATATGCGACATTTTTTTTTTTTTGAAAAATTACTTACATTTTGACTTTTCTGCCATACGTCTTGATACTTCTTTTAATTCATGCTGTTATTTACTTGGCTAAAATTTAATTTTACTTTGCTAGCTTCCAAGAGAACTAAGCCGTAGAAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTACCTTCTGTAGATTATATAATTTTCCTTTGTTCTCAAATTCTTTGTTTTATTCTGCAAATGATAATCTTTCCATGTTTCTTTAATGTGGAGGTCAGGTTTTTGACATTTTACTCCTATCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTTGCTCAGGTAATTAACATGCCTTGCAATAATTCTCGATGTTTGCTTGGTTTAGTGGGCTCTCATTTTATATCAATTTTCTTGCTTATGAAGACTGAATGGCTTGCTTTTGATGCTTTTTTTGGCAGTTTGTCATTTTCTATGCTTGTTCATTAGATCCTGAAGTTTGTGGTGCGAGATTTGCTGTTTCGCTTGCTGATATGTTTGTTTCCTGCAATGATCCTCCGCTTATCAGGTATTAGCAATTCATTAGAAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTNNNNNNNNNNNNNNNNNNNNAAGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTATTGGGTAAGAAACAAATTTTGTTGGTTAGTCTTGCCTTTGAAACCTATGTTTCACTAGTGTTTGTAAGCTTCATAAAAGATCTGAAGGTGGGCCAACATATTTACGTTGCCTTTACTTTTTACAACACTTGCTTCACCCGTTCTTATTCGTTTAGCAGCCATTTAAATTGAATCTCCTTTGCAAGGTCTTACTCATCTAAGAAATCAACTACTAACAATTGTGGGGTTGAGTTGAGTCTTTCTCTCTCTAGTATTATTTTATTTTAGGGGTTTTAAAGTTTTTTGTTTTCTTTTATCTATATAGGAATATACATAAAAGAATATAAAAGAAGTCCTTCTTTAAATGGAAGAATTTTGCTCCTGCATGAGCCTATCAAATTTGTAGTATTGTAGACAAATGTTCGTGACTTGAGAAGGGATGAAAGCAAGCAGTTACTAAGGAATTCTATAAAATTTGTGTGAATAGCTTAGTAGCCTTTTACATAAATATAATCTTACAACTTCACACTGTCTCACACACTAGTAGGCCCCCAGTCTGAACCTACGCTCAAACAAATATTTTCATTTTTTCTACAAAAATGAATTTGTTTTTAGTCTTTGGACTTGAGCTCAAACATGTTTTCCTCCTCCTCCTCCTACTTATTTATTATTATTATTTTTTAATATAAAAATGAAAATTAAATAATGTATGTTTGCAATGTTGTGCAGGATGAGTGCTGTTTCATATCTTGCTAGTTTCTTGTCTCGTGGGAAGTTTTTGACAACCTCTTTGGTTACTACTATATTGAAAAGGTTAACTTGTCAACTTTATTTTGATGAAATTAATATAGGTAGGGTGTGGCCTTAAGTCTAGTTTTGCTTCTTATTTCTTTCAGATTGGTGGATTGGTGTTTAGAATATGGCGAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGTATACATTGCTTGAACTCCTTATTGTTAGACTAAGGCAGTGAGATTTGTTAAAAAACGGAAATATAATGATTAAATTGTTGTTATTGATTTGTTGAAAAACTGGAATATAGCCCTTCTACCTGCTGGTTGAAGGTCCTTACTTACACGCTCAGGCGAAAATCCTTCAGTCCGATGGAGGTTATGGTTTGAAAGAAACTTCAGAATCTTTCTTGAATCGTGATCAAGAAACTGACCTTGACTACTTGGTCTTCTACTTCTATGCGTCTCCCCCGTATATTCATGAAAAATCAAGGGGTCAATTGGCAAACCCTGAAATGGTTTTTTTGGTTACTTTATTTTATTTTTATTATTTTAAATTCTCCCTTGTTGAGCCCTAGAGAAATAAAACTGGACTTTGAAATATGGATTCAATTCTAACACTTTGAATTGCATCTTGGAGAATGAACTTCATGAAGGTGTTGGTTAATTAGAAAAAAATGGCATTCTTGCAGTTTTTTATTTATAAGATTTAGAACTTTGTCCTCCTTTTTTTTAATGATTTCTTTTCCACAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATTGGTCCTCTCTTGACGCATAGATTAAGCCCACTGAAGGTGGGTAATTGGTTGATCCCTTTATCTTTGGTGGTTTTTTTTTTTTTTGTTATAAATTGTTCGGCTAGTTATTTCTTGTCCTTGAAATCAACGTTTATGATCTGAAAACCCAGTAACCATATGGTACCTGAAAACCGAGTAACCATAGGTACTTGAGGTCCATTGGTTTGTTTATTTAATCAATTTTTTCATATAGCCTCTATTCCTCCCTCTTGAGAAATTGGAGATATCTTTTGCAACTCCAATGGTTCGGCGATATGCCCCTCTTTTGCAAATTTGATACATCAATAGAACTTGTAAATAAAAAACGTTAATCTCCCTCATGGACATCTATCCATGCATTAAGTTGGAAATGTTTATAAGTTAACATTTTGGCTTTGGAGCTTGACGTCTTGTTTTGTAATTTTGCAACTCCTCTCCGGTGCTTCATAATATTGAATCCACAAATCTGGGATTTCTGCTATAGTTTTGATGTTGTGTCATTAACCTCAAATGATTTAATTATGGTCTGAAGCGCTGTTCTTTGCAATTTTCTTATATGAAATTTATTTTGACGTCTTCTTGTTTAACAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCAGCAGGCAAAAGTTGCTAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGAGTCTGAATATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCATTTGACCCTTGCTTATTAAAAAAATGTGACAGGTATATACTCTTATTGTTAATCTTCTTTGTTTCCTTTTCAAGACAACAAAGGATAGATGGGATCATAAAACCATTATAAAATATGAACAGACGTAGAAGAATTTATAAAATGATTCTGCCTGCTCATTGTGGCTATGCTTTATATTCAAAATGATTGATTACTAAGAGTGAGTACGCTTGAGAACTTGAAGGTGTACGGATGTTTTGTTTGATTTTTCTTTTGAATTATAACTCATGCTTTGTTGTTCCTCCTTGTTTATGAAGATATCTTCGGCCACATTTTGTATACTGGTCGATGGTCAGACCTACCTATGCCGAAGAAGAAGAACAAGAGGAAGATGGAGGTAGCAGCGATGAGGATGCAGAGGTTTTTCCAGATATAATTGAGGAAAACCTTATGGATGATGTAGCAATGGCAAGAAGCTACGACGACCAAGATTTTGATCTTGATTCTGGATTAAACAATATGTCCATCACACCAAGAAATTCGCTTCAGTACCGGCACGATTTTGTTAAGATGCCCTCAAGAATCCGACCCTCGATGAGTCCAGAATCTTTGTGATAACATATCTCAGCTTGAATAGTTAACTGGAATGCAAATGAGAATGGCGCTGCGCATTCATATTTCACAAAATGGTGATTGCAAATCTAGTTTTGGTTTTGGGGTTGTCTTCTTTACTTCAAATGTATGATAATTAGGTGGGTTAGAATCGTTGTTGGGGGTTCAGTTTTGAATTATTCCTTTTCTAGCTTTGCAGCGCTTTGATTATTGCCCTTGTTTACACTCCAGGATTGTAATAGTTTTACCAAGTGATGAAATACTGCCAAAATTTTGTACACTTCTGAGTGATACATGTATAAGCAAAAATTTTCATTATAATTCAAACCGATCCAATTACAGACT

mRNA sequence

AGCGCCGTTGGTCTCCTCTGCTCAGGTTATCACTTCTAAACCGTCCGTCTTCCTCTTCTCAATCTCTTCATCTTCTCACTTCTCAGTCGTCTGACTCATCTCCCTCTTGTTTGAATTTCATCCTGTTCCCAGCCCCCACTGTGACGATAGGATTTCAATAGGGGCCGGGCATTAATCATGGGGGCGGAACTGGAAAATAATCAGGCTCAGTTGCACGATATGGAGGATGTTAATCTCACAGATGCCCAGTTAGTTGATTTCATTAGGGGTTTTCTTAGTTCAGTGTCACTGGGAGATACTGATGGGTATAACCAGCTTGTTGGTGTTATACACCACAGAGATCGACTATCTCCCGACGAGGTTGCCTTGCTCGTGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCATTCAACACGAATCTCTGCTTGCAGCAATTTTTAAAATGAGCTTGTGGGATTATGGACCTAACGTGATGGATTCCCTGATTGAACTAATAATATCCCTGGCTGTTTCAAATGGAAAATATGTGAATTCATGCTTGGATATGCTTGTAAATAACTTCATGCCGCCCAATTCCTACATGGATTTCCTGAAGAAACCACATGGTCTTACAAAAAAGGATGAAGTTCTTTCTCGAGTACACACAGCTCTAAAAGATATATCAGACCTGGTGCCTCTTGCACCCTTGAGATTGGAGCAGATAGTTGTCCATAAAATGCAAAGAGTCTTTTTCAAAGAATCTTTGACCACGATATATGTGGAAAACATGTTGAGGTTGGAAAAGGGTGCATTGAGTGAATTTGTTGGGAGAAAGATCTTAACTGCGCTGGTGGATAAGCTTCTAGATTTGGATGTGGAGATTGGGTGGGATGATATTCTACAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGATGATGAAACTACAGATGATATTAATGAGGATTCTAGTGAGCTTCCAAGAGAACTAAGCCGTAGAAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTTTTTGACATTTTACTCCTATCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTTGCTCAGTTTGTCATTTTCTATGCTTGTTCATTAGATCCTGAAGTTTGTGGTGCGAGATTTGCTGTTTCGCTTGCTGATATGTTTGTTTCCTGCAATGATCCTCCGCTTATCAGGATGAGTGCTGTTTCATATCTTGCTAGTTTCTTGTCTCGTGGGAAGTTTTTGACAACCTCTTTGGTTACTACTATATTGAAAAGATTGGTGGATTGGTGTTTAGAATATGGCGAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATTGGTCCTCTCTTGACGCATAGATTAAGCCCACTGAAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCAGCAGGCAAAAGTTGCTAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGAGTCTGAATATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCATTTGACCCTTGCTTATTAAAAAAATGTGACAGATATCTTCGGCCACATTTTGTATACTGGTCGATGGTCAGACCTACCTATGCCGAAGAAGAAGAACAAGAGGAAGATGGAGGTAGCAGCGATGAGGATGCAGAGGTTTTTCCAGATATAATTGAGGAAAACCTTATGGATGATGTAGCAATGGCAAGAAGCTACGACGACCAAGATTTTGATCTTGATTCTGGATTAAACAATATGTCCATCACACCAAGAAATTCGCTTCAGTACCGGCACGATTTTGTTAAGATGCCCTCAAGAATCCGACCCTCGATGAGTCCAGAATCTTTGTGATAACATATCTCAGCTTGAATAGTTAACTGGAATGCAAATGAGAATGGCGCTGCGCATTCATATTTCACAAAATGGTGATTGCAAATCTAGTTTTGGTTTTGGGGTTGTCTTCTTTACTTCAAATGTATGATAATTAGGTGGGTTAGAATCGTTGTTGGGGGTTCAGTTTTGAATTATTCCTTTTCTAGCTTTGCAGCGCTTTGATTATTGCCCTTGTTTACACTCCAGGATTGTAATAGTTTTACCAAGTGATGAAATACTGCCAAAATTTTGTACACTTCTGAGTGATACATGTATAAGCAAAAATTTTCATTATAATTCAAACCGATCCAATTACAGACT

Coding sequence (CDS)

ATGGGGGCGGAACTGGAAAATAATCAGGCTCAGTTGCACGATATGGAGGATGTTAATCTCACAGATGCCCAGTTAGTTGATTTCATTAGGGGTTTTCTTAGTTCAGTGTCACTGGGAGATACTGATGGGTATAACCAGCTTGTTGGTGTTATACACCACAGAGATCGACTATCTCCCGACGAGGTTGCCTTGCTCGTGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCATTCAACACGAATCTCTGCTTGCAGCAATTTTTAAAATGAGCTTGTGGGATTATGGACCTAACGTGATGGATTCCCTGATTGAACTAATAATATCCCTGGCTGTTTCAAATGGAAAATATGTGAATTCATGCTTGGATATGCTTGTAAATAACTTCATGCCGCCCAATTCCTACATGGATTTCCTGAAGAAACCACATGGTCTTACAAAAAAGGATGAAGTTCTTTCTCGAGTACACACAGCTCTAAAAGATATATCAGACCTGGTGCCTCTTGCACCCTTGAGATTGGAGCAGATAGTTGTCCATAAAATGCAAAGAGTCTTTTTCAAAGAATCTTTGACCACGATATATGTGGAAAACATGTTGAGGTTGGAAAAGGGTGCATTGAGTGAATTTGTTGGGAGAAAGATCTTAACTGCGCTGGTGGATAAGCTTCTAGATTTGGATGTGGAGATTGGGTGGGATGATATTCTACAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGATGATGAAACTACAGATGATATTAATGAGGATTCTAGTGAGCTTCCAAGAGAACTAAGCCGTAGAAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTTTTTGACATTTTACTCCTATCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTTGCTCAGTTTGTCATTTTCTATGCTTGTTCATTAGATCCTGAAGTTTGTGGTGCGAGATTTGCTGTTTCGCTTGCTGATATGTTTGTTTCCTGCAATGATCCTCCGCTTATCAGGATGAGTGCTGTTTCATATCTTGCTAGTTTCTTGTCTCGTGGGAAGTTTTTGACAACCTCTTTGGTTACTACTATATTGAAAAGATTGGTGGATTGGTGTTTAGAATATGGCGAAACACTGAATGTTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGCCATAATGTATGTGCTTTGCTTCCGGATGAGGTCCATTTTGGAAATTCCACGTCTGAAGTCCCAACTTCTGCTTATGCCCATTGGTCCTCTCTTGACGCATAGATTAAGCCCACTGAAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCAGCAGGCAAAAGTTGCTAATTTATTTACACCGTCGGAGACTTTTATATTCAATGGTTTGCTGGAGTCTGAATATTCAAGAAGTTTTGGTGGATTAGAAAGGCTCGACATGTTTTTTCCATTTGACCCTTGCTTATTAAAAAAATGTGACAGATATCTTCGGCCACATTTTGTATACTGGTCGATGGTCAGACCTACCTATGCCGAAGAAGAAGAACAAGAGGAAGATGGAGGTAGCAGCGATGAGGATGCAGAGGTTTTTCCAGATATAATTGAGGAAAACCTTATGGATGATGTAGCAATGGCAAGAAGCTACGACGACCAAGATTTTGATCTTGATTCTGGATTAAACAATATGTCCATCACACCAAGAAATTCGCTTCAGTACCGGCACGATTTTGTTAAGATGCCCTCAAGAATCCGACCCTCGATGAGTCCAGAATCTTTGTGA

Protein sequence

MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNSLQYRHDFVKMPSRIRPSMSPESL*

Homology

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BLAST of MELO3C006107T3 vs. Swiss-Prot
Match: RRN3_MOUSE (RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus GN=Rrn3 PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 4.5e-40
Identity = 149/550 (27.09%), Postives = 240/550 (43.64%), Query Frame = 1


Query: 85  ESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLK 144
           E L+  I ++   +    V++  +  + +L  +   ++  CL M+ ++F+PP      + 
Sbjct: 105 EQLINIILRLPWLNRSQRVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPR----VIV 164

Query: 145 KPHGLTKKDE---------VLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLT 204
           K  G+   D          +    H AL+ I+  VP  P  L  I+V K   V   E   
Sbjct: 165 KEGGIDVSDSDDEDDNLPAIFDTCHRALQIITRYVPSTPWFLMPILVEKFPFVRKSERTL 224

Query: 205 TIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ-----------DDFS 264
             YV N+LR+        + R+IL  +++KLL LDV +   DI              D +
Sbjct: 225 ECYVHNLLRIS--LYFPTLRREILELVIEKLLKLDVSVSRQDIEDAEEKAAQTCGGTDTT 284

Query: 265 KGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES-CER 324
           +G+F M   D+DE TD   +   E P +++  +      AE LD L+ L   ++E  C  
Sbjct: 285 EGLFNM---DEDEDTDPEKKADQEQPNQMAHPT------AERLDVLLCLLLSYIEDVCRV 344

Query: 325 DGRLN-----EVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMF 384
            G+++     +++  L+  F + +L  + S   QF +F+ CS       A F   L    
Sbjct: 345 HGKIDNNKTKDLYRDLISIFDKLLLPTHASCHVQFFMFFLCSFKLGFAEA-FLEHLWKKL 404

Query: 385 VSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA-- 444
              N+P +IR +A +Y+ SFL+R KF+    V T L  LV+W   Y    N D   KA  
Sbjct: 405 QDPNNPAIIRQAAANYIGSFLARAKFIPLITVKTCLDLLVNWLHMY--LTNQDSGTKAFC 464

Query: 445 ----HKVFYSGCQAIMYVLCFRMRSIL--EIPRLKSQLLLMPIGPLLTHRLSPLKVCLPS 504
               H  FYS CQA+ Y + FR + +L   + +    L  +    ++  +L+PLK+CLP 
Sbjct: 465 DVALHGPFYSACQAVFYTVVFRHKQLLSGNLKQGLQYLQSLNFERIVLSQLNPLKICLPQ 524

Query: 505 IVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSF--------GG------LERLDMFFP 564
           +V  F   A + N +      +F   +    SR          GG         LD FFP
Sbjct: 525 VVNFF---AAITNKY----QLVFCYTIMERNSRQMLPVIRSTAGGDSVQTCTNPLDTFFP 584

Query: 565 FDPCLLKKCDRYLRPHFVYWSMVRPTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVA 587
           FDPC+LK+  +++ P +  W              EDG  S E+ + F    ++ +++D  
Sbjct: 585 FDPCVLKRSKKFIDPIYQIW--------------EDG--SAEELQEFKKSTKKEVVED-- 606

[Close]

BLAST of MELO3C006107T3 vs. Swiss-Prot
Match: RRN3_PONAB (RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii GN=RRN3 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.7e-35
Identity = 139/515 (26.99%), Postives = 220/515 (42.72%), Query Frame = 1


Query: 85  ESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYM---- 144
           E L++ I ++  W     V++  +  + +L  +   ++  CL M+ ++F+PP   +    
Sbjct: 107 EQLISIILRLP-WLKSQTVVEEYLAFLANLVSAQTVFLRPCLGMIASHFVPPRVIIKEGD 166

Query: 145 -DFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYV 204
            D                  H AL+ I+  VP  P  L  I+V K   V   E     YV
Sbjct: 167 VDVSDSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYV 226

Query: 205 ENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ-----------DDFSKGIF 264
            N+LR+        +  +IL  +++KLL LDV     DI              D ++G+F
Sbjct: 227 HNLLRIS--VYFPTLRHEILELIIEKLLKLDVNASRQDIEDAEETATQTCGGTDSTEGLF 286

Query: 265 EMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES-CERDGRL 324
            M+  +D+ET  +       L + +       + +AE LD L+ L   +++  C  DG++
Sbjct: 287 NMD--EDEETEHETKAGPERLDQMV-------HPVAECLDILMSLVLSYMKDVCYVDGQV 346

Query: 325 N-----EVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCN 384
           +     +++  L+  F + +L+ + S   QF +FY CS       A F   L       +
Sbjct: 347 DNGKTKDLYRDLINIFDKLLLSTHASCHVQFFMFYLCSFKLGFAEA-FLEHLWKKLQDPS 406

Query: 385 DPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA------ 444
           +P +IR +A +Y+ SFL+R KF+    V + L  LV+W   Y    N D   KA      
Sbjct: 407 NPAIIRQAAGNYIGSFLARAKFIPLITVRSCLDLLVNWLHIYLN--NQDSGTKAFCDVAL 466

Query: 445 HKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMP---IGPLLTHRLSPLKVCLPSIVE 504
           H  FYS CQA+ Y   FR + +L    LK  L  +       ++  +L+PLK+CLPS+V 
Sbjct: 467 HGPFYSACQAVFYTFVFRHKQLLS-GNLKEGLRYLQSLNFEWIVMSQLNPLKICLPSVVN 526

Query: 505 EFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLER-------LDMFFPFDPCLLKKCD 553
            F        L         N        RS  G +        LD FFPFDPC+LK+  
Sbjct: 527 FFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQTCTNPLDTFFPFDPCVLKRSK 586

[Close]

BLAST of MELO3C006107T3 vs. Swiss-Prot
Match: RRN3_HUMAN (RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens GN=RRN3 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.2e-34
Identity = 137/524 (26.15%), Postives = 225/524 (42.94%), Query Frame = 1


Query: 85  ESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYM---- 144
           E L++ I ++   +    V++  +  + +L  +   ++  CL M+ ++F+PP   +    
Sbjct: 107 EQLISIILRLPWLNRSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGD 166

Query: 145 -DFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYV 204
            D                  H AL+ I+  VP  P  L  I+V K   V   E     YV
Sbjct: 167 VDVSDSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYV 226

Query: 205 ENMLRLEKGALSEFVGRKILTALVDKLLDLDVEI---GWDDILQD--------DFSKGIF 264
            N+LR+        +  +IL  +++KLL LDV     G +D  +         D ++G+F
Sbjct: 227 HNLLRIS--VYFPTLRHEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLF 286

Query: 265 EMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES-CERDGRL 324
            M+  +D+ET  +       L + +       + +AE LD L+ L   +++  C  DG++
Sbjct: 287 NMD--EDEETEHETKAGPERLDQMV-------HPVAERLDILMSLVLSYMKDVCYVDGKV 346

Query: 325 N-----EVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCN 384
           +     +++  L+  F + +L  + S   QF +FY CS       A F   L       +
Sbjct: 347 DNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMFYLCSFKLGFAEA-FLEHLWKKLQDPS 406

Query: 385 DPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA------ 444
           +P +IR +A +Y+ SFL+R KF+    V + L  LV+W   Y    N D   KA      
Sbjct: 407 NPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLVNWLHIYLN--NQDSGTKAFCDVAL 466

Query: 445 HKVFYSGCQAIMYVLCFRMRSILE--IPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEE 504
           H  FYS CQA+ Y   FR + +L   +      L  +    ++  +L+PLK+CLPS+V  
Sbjct: 467 HGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSLNFERIVMSQLNPLKICLPSVVNF 526

Query: 505 FLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLER-------LDMFFPFDPCLLKKCDR 564
           F        L         N        RS  G +        LD FFPFDPC+LK+  +
Sbjct: 527 FAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSKK 586

Query: 565 YLRPHFVYW-SMVRPTYAEEEEQEEDGGSSDEDAEVFPDIIEEN 571
           ++ P +  W  M      E ++  +     DED +     + +N
Sbjct: 587 FIDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDFLKGEVPQN 616

[Close]

BLAST of MELO3C006107T3 vs. Swiss-Prot
Match: RRN3_SCHPO (RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrn3 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.1e-30
Identity = 148/585 (25.30%), Postives = 250/585 (42.74%), Query Frame = 1


Query: 17  DVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPDEVAL-LVTCLKALSGA 76
           D  L    L  F+   L   + G+  GY  L      +        +L L   L AL+  
Sbjct: 46  DGRLMQQMLRAFVNKALDDKAEGNFAGYEDLRRQFAAKSDTKDAPSSLQLQNLLSALTCN 105

Query: 77  VSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMP 136
           VS +D   + SL+ ++          + +      + +L  +   Y+   + ML+ +   
Sbjct: 106 VSRLDS-SNSSLVMSVLDSVWVSRDESFVRCYTRFLGNLISAQSNYLPLVMTMLIQHM-- 165

Query: 137 PNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLT 196
                  L +P  L    E     H ALK + +LVP A   L   ++ +    +  ESL 
Sbjct: 166 -------LYRPDSLAIHYE---HAHMALKYVLELVPRAHSFLYSSILEEFP--YKDESLL 225

Query: 197 T--IYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELE 256
               Y+ N+L + +   S  +   +L A++DK++ +DVEI               ++E++
Sbjct: 226 AQMTYISNVLSICEYVPS--IKGPVLHAIIDKIIQIDVEI---------------QVEVD 285

Query: 257 DDDETTDDI--------NEDSS--------ELPRELSRRSLGGNVIA-----------ET 316
           DDDE  D++        N DS         E    +S       ++            + 
Sbjct: 286 DDDEEEDEVVTDDDGTSNADSEVITASTLYERHTAISSEMTSSTILTPPSLTDTRQLMQQ 345

Query: 317 LDSLIVLTFEHLES----CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLD 376
           LD L+   F +L+S      RD  L  V++ L+ SF  TVL  ++ ++ QF+IF+A  LD
Sbjct: 346 LDQLLYTLFSYLDSNLKSTSRDRYL--VYNSLIKSFVNTVLKTFRCRYTQFLIFWASQLD 405

Query: 377 PEVCGARFAVSLADMFVSCNDPPLIRMSAVSYLASFLSRGKFL---TTSLVTTILKRLVD 436
           PE       V L ++ +  + P  +R+S   Y+ S+++R K L   T  ++  ++ R V+
Sbjct: 406 PEFTDIFLGV-LTEVCLDPSQPYTLRLSGAMYIGSYVARAKALEKNTIQIIVNMMTRWVE 465

Query: 437 WCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLL--------LM 496
             L+  E    D     H VFY+  Q+I Y+ CFR R +      +S           L 
Sbjct: 466 AYLDQCENELSDDLLSKHSVFYAINQSIFYIFCFRWRELCVSDESESMEPRPNEWIPGLE 525

Query: 497 PIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFIFNGLLESEYSRSFGGLERL 556
            +   +  RL+PL+ C P+IV   LQ AKVAN    +  ++++ + ++       G + +
Sbjct: 526 ILHRSVLSRLNPLRYCSPNIV---LQFAKVANHL--NFMYVYSIIEQNRKGIFREGFDTM 585

[Close]

BLAST of MELO3C006107T3 vs. Swiss-Prot
Match: RN3P1_HUMAN (Putative RRN3-like protein RRN3P1 OS=Homo sapiens GN=RRN3P1 PE=5 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-10
Identity = 46/129 (35.66%), Postives = 65/129 (50.39%), Query Frame = 1


Query: 362 NDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKA----- 421
           ++P +IR +A +Y+ SFL+R KF++   V   L  LV+W   Y    N D   KA     
Sbjct: 19  SNPAIIRQAAGNYIGSFLARAKFISLITVKPCLDLLVNWLHIY--LNNQDSGTKAFCDVA 78

Query: 422 -HKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLL---MPIGPLLTHRLSPLKVCLPSIV 481
            H  FYS CQA+ Y   FR + +L    LK  L     +    ++  +L+PLK+CLPS+V
Sbjct: 79  LHGPFYSACQAVFYTFVFRHKQLLS-GNLKEGLQYPQSLNFERIVMSQLNPLKICLPSVV 138

[Close]

BLAST of MELO3C006107T3 vs. TrEMBL
Match: A0A0A0L7G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122360 PE=4 SV=1)

HSP 1 Score: 1181.8 bits (3056), Expect = 0.0e+00
Identity = 594/624 (95.19%), Postives = 609/624 (97.60%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MEDVNLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDII HESLLAAIFKMSLWDYG NVMD+LIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YV+SCLDMLVNNFMPPNSYMD LKKPHGLT+K+EVLSRVHTALKDISDLVPLAPLRLEQ 
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FYACSLDPEVCGARFA+SLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540
           VANLFTPSE FIFNGLLES+YSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR
Sbjct: 481 VANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540

Query: 541 PTYAEEEEQEE-DGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITP 600
           PTY EEEE+EE DGGSSDEDAE+FPD I+ENLMDD AMA SYDDQDFDLDSGLN MSITP
Sbjct: 541 PTYDEEEEEEEDDGGSSDEDAEIFPDRIDENLMDDEAMAISYDDQDFDLDSGLNKMSITP 600

Query: 601 RNSLQYRHDFVKMPSRIRPSMSPE 624
           RNSLQYR DFV+MPSRIRPSMSPE
Sbjct: 601 RNSLQYRCDFVQMPSRIRPSMSPE 624

[Close]

BLAST of MELO3C006107T3 vs. TrEMBL
Match: F6I0C5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01700 PE=4 SV=1)

HSP 1 Score: 820.5 bits (2118), Expect = 1.4e-234
Identity = 418/632 (66.14%), Postives = 506/632 (80.06%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MG EL  ++A  H+ME+VN +D++LV  +R  L SV LGD+D Y+QL+GV+HH++RL+PD
Sbjct: 1   MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVT LKALSGAVSCID++ H+SLL++IF MSLW+YGP+VMD+L+ELI+SLA S+G 
Sbjct: 61  EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGN 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           Y++  LDMLV+NFMPP S +DFLK+P GL +KD+VLSRVH+ LKDI+DLVPLAP RL  I
Sbjct: 121 YLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           V+ +M  VF KE L  IYVENMLRLE GA+ E VG  +L AL+D+L+DLDVEI W+++LQ
Sbjct: 181 VIQRMPNVFTKEPLIMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPR-ELSRRSLGGNVIAETLDSLIVLTFEHLE 300
           DD SKGIFEMELED +E  DD+  D  EL R  LSR+SLGGN+IAE LDSL+VLTFEHLE
Sbjct: 241 DDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLE 300

Query: 301 SCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFV 360
           SCE  GRL EVF+ L+LSFQ TVL A+KSKFAQFV+FYAC+LDPE CG RFA  LAD FV
Sbjct: 301 SCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFV 360

Query: 361 SCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKV 420
               PPL RMSAV+YLAS+LSRGKFLT S V  IL+RLV WCLEY +  + D NPKAH+V
Sbjct: 361 CSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGDINPKAHQV 420

Query: 421 FYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQA 480
           FYSGCQAIMYVLCFRMRS++ +P L+SQLLL+P+  +L H LSPLKVCLPSIVEEFL+QA
Sbjct: 421 FYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQA 480

Query: 481 KVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMV 540
           K A LFT SETFIF+ LLESE SR+FGG+ERLDMFFPFDPCLLKKCDR++RP+FVYWSM+
Sbjct: 481 KAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMI 540

Query: 541 RPTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDS---GLNNMS 600
           R TY + E+      S +E AE +     +++M+D AMARSYD  D +LD     +N MS
Sbjct: 541 RTTYDDGED-----SSDEEPAEDYEASHPDDVMNDDAMARSYDSHDLELDEFDHSMNKMS 600

Query: 601 ITPRNSLQYRHD---FVKMPSRIRPSMSPESL 626
           ITP+NSL YR      V+MPSRIRPS SPESL
Sbjct: 601 ITPKNSLYYRFGDELKVQMPSRIRPSTSPESL 627

[Close]

BLAST of MELO3C006107T3 vs. TrEMBL
Match: A0A059AGW7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02557 PE=4 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 9.3e-226
Identity = 400/635 (62.99%), Postives = 503/635 (79.21%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MG EL N +A   +MEDVN TD +LV  +R  L SVSLGD++ Y++L+GV+HHR+RLSPD
Sbjct: 1   MGVELANERAGFLEMEDVNFTDNELVYHVRTALKSVSLGDSESYDELIGVMHHRERLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSG VSCID++ HESLL++IF MS+W+YGP VMD+L++LIISLA S+GK
Sbjct: 61  EVALLVTCLKALSGTVSCIDVVHHESLLSSIFGMSMWNYGPEVMDALVDLIISLAASSGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YV+SCLDML+ NF+PP SY+  LK+P GL++KD+VLSRVH+AL+ I  LVPLAP+RL  +
Sbjct: 121 YVDSCLDMLIRNFVPPYSYLALLKQPRGLSRKDQVLSRVHSALESIGHLVPLAPMRLLSL 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VV +M R +  E++   YVENM +LE G++ + VG  +LTA+VD+LLDLD+EIGW+DILQ
Sbjct: 181 VVQRMPRQYDNEAVIMTYVENMFKLESGSMGQLVGSTMLTAVVDRLLDLDLEIGWEDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELP-RELSRRSLGGNVIAETLDSLIVLTFEHLE 300
           +D SKGIFEMELED +E  +D N++  ELP + LSR SL GN+IAE LDSL+VLTFE+LE
Sbjct: 241 EDSSKGIFEMELEDLEEDEEDWNDEGGELPGKHLSRNSLRGNIIAEKLDSLLVLTFEYLE 300

Query: 301 SCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFV 360
           SC+  GRL EVF+ LL SF+ TVL AYKSKF+QFV+FYAC+LDPE CG RFA  L D+FV
Sbjct: 301 SCQGRGRLLEVFETLLHSFRITVLNAYKSKFSQFVMFYACALDPENCGVRFARMLLDIFV 360

Query: 361 SCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKV 420
             + PP  RMSAV+YLAS+LSRGKFL+TS +TT+LKRLVDWCL+Y +  + D NP AH+V
Sbjct: 361 CHDHPPNTRMSAVAYLASYLSRGKFLSTSYITTMLKRLVDWCLDYCKVQDEDVNPLAHRV 420

Query: 421 FYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQA 480
           FY+GCQAIMYVLCFRM S++ IPRLKSQL LMPI  +L H+  PLKVCLPS+V EFL+QA
Sbjct: 421 FYAGCQAIMYVLCFRMWSMMSIPRLKSQLFLMPIETILKHKSDPLKVCLPSVVGEFLKQA 480

Query: 481 KVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMV 540
           + A LFT S+T I + +LE+E SR+FGGLERLD FFPFDPCLLKK DR++RP+F++WSMV
Sbjct: 481 RAARLFTVSKTSISDDILETELSRAFGGLERLDTFFPFDPCLLKKSDRFIRPNFIFWSMV 540

Query: 541 RPTYAEEEEQEEDG-GSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDL---DSGLNNM 600
           + TY ++E+++ED  GSSDED E   D   EN  D   MA S+D++D D+   D  LN M
Sbjct: 541 KTTYDDDEDEDEDAEGSSDEDGEESVDGAVENRGD--GMATSFDERDIDMEEFDYALNKM 600

Query: 601 SITPRNSLQYR-----HDFVKMPSRIRPSMSPESL 626
           SITP+ S  YR      + V+MPSRIRPS SPESL
Sbjct: 601 SITPKQSSMYRFGSGLDELVRMPSRIRPSTSPESL 633

[Close]

BLAST of MELO3C006107T3 vs. TrEMBL
Match: A0A059AHZ5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02557 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 2.3e-224
Identity = 400/636 (62.89%), Postives = 503/636 (79.09%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MG EL N +A   +MEDVN TD +LV  +R  L SVSLGD++ Y++L+GV+HHR+RLSPD
Sbjct: 1   MGVELANERAGFLEMEDVNFTDNELVYHVRTALKSVSLGDSESYDELIGVMHHRERLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISL-AVSNG 120
           EVALLVTCLKALSG VSCID++ HESLL++IF MS+W+YGP VMD+L++LIISL A S+G
Sbjct: 61  EVALLVTCLKALSGTVSCIDVVHHESLLSSIFGMSMWNYGPEVMDALVDLIISLQAASSG 120

Query: 121 KYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQ 180
           KYV+SCLDML+ NF+PP SY+  LK+P GL++KD+VLSRVH+AL+ I  LVPLAP+RL  
Sbjct: 121 KYVDSCLDMLIRNFVPPYSYLALLKQPRGLSRKDQVLSRVHSALESIGHLVPLAPMRLLS 180

Query: 181 IVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDIL 240
           +VV +M R +  E++   YVENM +LE G++ + VG  +LTA+VD+LLDLD+EIGW+DIL
Sbjct: 181 LVVQRMPRQYDNEAVIMTYVENMFKLESGSMGQLVGSTMLTAVVDRLLDLDLEIGWEDIL 240

Query: 241 QDDFSKGIFEMELEDDDETTDDINEDSSELP-RELSRRSLGGNVIAETLDSLIVLTFEHL 300
           Q+D SKGIFEMELED +E  +D N++  ELP + LSR SL GN+IAE LDSL+VLTFE+L
Sbjct: 241 QEDSSKGIFEMELEDLEEDEEDWNDEGGELPGKHLSRNSLRGNIIAEKLDSLLVLTFEYL 300

Query: 301 ESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMF 360
           ESC+  GRL EVF+ LL SF+ TVL AYKSKF+QFV+FYAC+LDPE CG RFA  L D+F
Sbjct: 301 ESCQGRGRLLEVFETLLHSFRITVLNAYKSKFSQFVMFYACALDPENCGVRFARMLLDIF 360

Query: 361 VSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHK 420
           V  + PP  RMSAV+YLAS+LSRGKFL+TS +TT+LKRLVDWCL+Y +  + D NP AH+
Sbjct: 361 VCHDHPPNTRMSAVAYLASYLSRGKFLSTSYITTMLKRLVDWCLDYCKVQDEDVNPLAHR 420

Query: 421 VFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQ 480
           VFY+GCQAIMYVLCFRM S++ IPRLKSQL LMPI  +L H+  PLKVCLPS+V EFL+Q
Sbjct: 421 VFYAGCQAIMYVLCFRMWSMMSIPRLKSQLFLMPIETILKHKSDPLKVCLPSVVGEFLKQ 480

Query: 481 AKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSM 540
           A+ A LFT S+T I + +LE+E SR+FGGLERLD FFPFDPCLLKK DR++RP+F++WSM
Sbjct: 481 ARAARLFTVSKTSISDDILETELSRAFGGLERLDTFFPFDPCLLKKSDRFIRPNFIFWSM 540

Query: 541 VRPTYAEEEEQEEDG-GSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDL---DSGLNN 600
           V+ TY ++E+++ED  GSSDED E   D   EN  D   MA S+D++D D+   D  LN 
Sbjct: 541 VKTTYDDDEDEDEDAEGSSDEDGEESVDGAVENRGD--GMATSFDERDIDMEEFDYALNK 600

Query: 601 MSITPRNSLQYR-----HDFVKMPSRIRPSMSPESL 626
           MSITP+ S  YR      + V+MPSRIRPS SPESL
Sbjct: 601 MSITPKQSSMYRFGSGLDELVRMPSRIRPSTSPESL 634

[Close]

BLAST of MELO3C006107T3 vs. TrEMBL
Match: W9QGA7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016497 PE=4 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 3.7e-214
Identity = 387/631 (61.33%), Postives = 480/631 (76.07%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MG EL N +A  H+++D + TD  LV  +R  L+SVS+GD+D YN+LV V+HHR  L+PD
Sbjct: 1   MGVELRNGEAGFHELDDADFTDYDLVYHVRDALTSVSMGDSDKYNELVAVMHHRGPLAPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVT LKALSGAVS ID + HESLL++IF M++W+Y P+VMD+L+ELIISLA SNG 
Sbjct: 61  EVALLVTSLKALSGAVSYIDSVLHESLLSSIFSMNMWNYRPDVMDALLELIISLAASNGT 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           Y++SCLDMLV NF PPN + D LK+P G+ +KD+VLSRVH++LK ++DLVPL+P+RL  I
Sbjct: 121 YIDSCLDMLVGNFTPPNYFTDMLKQPRGIARKDQVLSRVHSSLKVLADLVPLSPMRLLPI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           ++ +      KE +  IYVENML+LE G   E VG  +L+ LVD LLDLDVEIGWDDILQ
Sbjct: 181 IIQRKPHYCSKEIILVIYVENMLKLESGIFGELVGSAMLSGLVDLLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           D+ +KGIF MELED DE  DD   D  ELPRELSR+SL GN+ A  LDSL+VL FEHLES
Sbjct: 241 DESAKGIFSMELEDVDEDIDDELMDGGELPRELSRKSLVGNLFARKLDSLMVLIFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CE   RL EVF+ LL  FQ+TVLTAYKSKF+QFV+FYAC+LDPE CG RFA  L D F+S
Sbjct: 301 CEVGRRLVEVFETLLQPFQKTVLTAYKSKFSQFVMFYACALDPENCGVRFANMLGDTFIS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
            + PPL+RMSAV+YLAS+LSRGKFL+TSL+   LKRLVDWCL+Y      + NPKAH++F
Sbjct: 361 NSHPPLLRMSAVAYLASYLSRGKFLSTSLIADTLKRLVDWCLDYCTIQEGEINPKAHRIF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMY LCFRMRSI+ +P  KSQ LLMPI  +L+H+LSPLKVCLPSIV EFL+Q+K
Sbjct: 421 YSGCQAIMYALCFRMRSIMGVPWFKSQ-LLMPINLILSHKLSPLKVCLPSIVTEFLRQSK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540
            A LF  SE F F+  LESE S+ FGG+ERLDMFFPFDPCLLK+CD ++RP++VYWSMVR
Sbjct: 481 AAGLFITSERFNFDDYLESELSKGFGGMERLDMFFPFDPCLLKRCDSFIRPYYVYWSMVR 540

Query: 541 PTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFD-LDSGLNNMSITP 600
           PTY + +E+      SDE+ +  P  +  N        +S +D D D  DS +N MSITP
Sbjct: 541 PTYDDGQEE-----GSDEEVDEAP--LGGN-------TKSREDFDLDEFDSAMNQMSITP 600

Query: 601 RNSLQYR-----HDFVKMPSRIRPSMSPESL 626
           ++SL++R      + ++MPSRIRPS SPESL
Sbjct: 601 KDSLKHRFGAALKEPLRMPSRIRPSTSPESL 616

[Close]

BLAST of MELO3C006107T3 vs. TAIR10
Match: AT2G34750.1 (AT2G34750.1 RNA polymerase I specific transcription initiation factor RRN3 protein)

HSP 1 Score: 610.1 bits (1572), Expect = 1.5e-174
Identity = 321/617 (52.03%), Postives = 437/617 (70.83%), Query Frame = 1


Query: 15  MEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHH--RDRLSPDEVALLVTCLKAL 74
           +++V+L+D QLV  +R  L+SV  GD+D Y+++VGV+    ++   PD VA L T LKAL
Sbjct: 20  VDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDIKEFKDPDVVAQLETVLKAL 79

Query: 75  SGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNN 134
           SGAV+CID++ H+ LL+A+F+M LWD+ P+VMD+L+ L+ISLAV++GKY++SCL+MLV+N
Sbjct: 80  SGAVACIDVLHHQKLLSALFRMKLWDHRPDVMDALVNLVISLAVTSGKYLDSCLNMLVSN 139

Query: 135 FMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKE 194
           F+PP   ++ L     L KK +VLSRVH AL  IS LVPL P RL  ++  +M ++  K+
Sbjct: 140 FVPPPWVVNNLSHSRILNKKIDVLSRVHAALLKISILVPLTPSRLVPMLFQQMPKMHKKD 199

Query: 195 SLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMEL 254
               IYVE++L+LE  ++ +  G  IL  ++++L DLD+EI WDDI QDD S+G+F+MEL
Sbjct: 200 HSIVIYVESLLKLENSSIGQVGGSMILGMVMERLRDLDLEIEWDDIPQDDSSRGMFDMEL 259

Query: 255 EDDDETTDDINEDSSELP-RELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVF 314
           ED  E T +   D  ELP   L + +  G+++++ LD L+V+ FEHLESC+ DGRL++VF
Sbjct: 260 EDAAEGTMN---DGDELPVGPLKQDTSDGSIVSKLLDKLMVVAFEHLESCQNDGRLDQVF 319

Query: 315 DILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSA 374
           + L  SF+  +L  YKSKF QF+IFYACSLDPE CG +FA  L ++F+S N     RMSA
Sbjct: 320 ESLFKSFENFILNTYKSKFTQFLIFYACSLDPENCGVKFASKLVEIFLSSNKHVATRMSA 379

Query: 375 VSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVL 434
           V+YLASFL+RGKFL  S V ++LKRL+D C+ Y  T N D  P+AH++F+SGCQAIMYVL
Sbjct: 380 VAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRTCNDDTRPEAHQIFFSGCQAIMYVL 439

Query: 435 CFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETF 494
           CFRMRSIL++PR +SQ  L P+  +L H+L+PL VCLPS+V EFL+QAK   LF  S++F
Sbjct: 440 CFRMRSILDVPRFRSQ--LTPLESILMHKLNPLMVCLPSVVAEFLRQAKEGGLFIVSDSF 499

Query: 495 IFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYAEEEEQEE 554
           IF+ LLESE SR+FGG ERLD FFPFDPCLLK  + ++ P+F+YWSMV+ TY E+++   
Sbjct: 500 IFDDLLESELSRAFGGFERLDTFFPFDPCLLKSSNSFISPNFIYWSMVKATYDEDDD--- 559

Query: 555 DGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNSLQ---YRHD 614
                D DAEV  +  E+          S +D + DLD  LN MSITP++S +    R  
Sbjct: 560 -----DNDAEVIVNGDED----------SDEDDEADLDYALNKMSITPKHSFKNKMERDR 613

Query: 615 FVKMPSRIRPSMSPESL 626
            ++MPSRIRPS SPESL
Sbjct: 620 LLRMPSRIRPSTSPESL 613

[Close]

BLAST of MELO3C006107T3 vs. TAIR10
Match: AT1G30590.1 (AT1G30590.1 RNA polymerase I specific transcription initiation factor RRN3 protein)

HSP 1 Score: 538.5 bits (1386), Expect = 5.5e-153
Identity = 300/611 (49.10%), Postives = 403/611 (65.96%), Query Frame = 1


Query: 15  MEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSG 74
           M++   TD  LV  +R  L+SV  GDTD Y+QL  V+   +    D VA L T LK+LS 
Sbjct: 16  MDNAEYTDTDLVFAVRKALASVQNGDTDDYSQLKTVMCLTEDADFDAVAQLETVLKSLSV 75

Query: 75  AVSCIDIIQHESLLAAIFKMSLW--DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNN 134
           +V+ ID++ H+ LL A   MSLW   + P+VMD+L++LIISLA ++GKY++ CL+MLV N
Sbjct: 76  SVAWIDLVHHKDLLEA---MSLWYHSHRPSVMDALVDLIISLAATSGKYLDPCLNMLVRN 135

Query: 135 FMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKE 194
           F  P ++   + +   + K  EV  RVH AL  IS L+PLAP  L  I+   M+++  K+
Sbjct: 136 FSQP-TFKHKVSQTQLVKKMQEVHPRVHAALHKISYLIPLAPWNLVSILAQNMRKIDKKD 195

Query: 195 SLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMEL 254
                YV+N+LRLE  ++ E VG  IL  +++++LDLD+  G DD      + G+F+MEL
Sbjct: 196 PSIVTYVDNLLRLENSSIGEVVGSVILMMVMERMLDLDLVSGCDDS-----NGGMFDMEL 255

Query: 255 EDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFD 314
           ED  E+T  +NE        L + + GGNV++E LD L+VL F HLESC+   RL+EVF+
Sbjct: 256 EDAVEST--MNEGDEFPVGALKQNTSGGNVVSELLDKLMVLFFHHLESCQNSDRLDEVFE 315

Query: 315 ILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRMSAV 374
           IL  SF+  +L  YK+KF+QF++FYACSLDPE CG RFA  L D+++S N   L RMSAV
Sbjct: 316 ILFKSFENYILNTYKTKFSQFLMFYACSLDPENCGVRFASKLLDIYLSSNTCRLTRMSAV 375

Query: 375 SYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVFYSGCQAIMYVLC 434
           +YLAS+LSRGKFL  S V ++LKRLVD C EY  T N D  P+AH+VFYSGCQAI+YVLC
Sbjct: 376 AYLASYLSRGKFLPASFVASMLKRLVDECAEYCGTCNDDVKPEAHQVFYSGCQAILYVLC 435

Query: 435 FRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFTPSETFI 494
           FRMRSI+EIPR +SQ     +  +L+H+L+PL VCLPS+V EFL+QAK   LF  SE+FI
Sbjct: 436 FRMRSIVEIPRFQSQ--FRSLESILSHKLNPLLVCLPSVVSEFLKQAKAGGLFIVSESFI 495

Query: 495 FNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYAEEEEQEED 554
           F+ L ESE SR+FGG ERLD FFPFDPCLLK    Y+ P+F +WSMV+ TY E+ ++E  
Sbjct: 496 FDDLHESELSRAFGGFERLDTFFPFDPCLLKMSSSYISPNFNFWSMVKTTYGEDGDEE-- 555

Query: 555 GGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPRNS-LQYRHDFVK 614
                        + +E +++  A +    D D +LDS +N MS TP++S ++     +K
Sbjct: 556 -------------LCDEVIVNGDADSAEEPDDDVELDSEMNTMSTTPKHSFMRETERLLK 598

Query: 615 MPSRIRPSMSP 623
           MPSRIRPS SP
Sbjct: 616 MPSRIRPSTSP 598

[Close]

BLAST of MELO3C006107T3 vs. TAIR10
Match: AT2G39240.1 (AT2G39240.1 RNA polymerase I specific transcription initiation factor RRN3 protein)

HSP 1 Score: 446.4 bits (1147), Expect = 2.8e-125
Identity = 271/630 (43.02%), Postives = 373/630 (59.21%), Query Frame = 1


Query: 14  DMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPDE------------ 73
           ++E  +L+D  LV  IR  L+S   GDTD YN+LV +++ + + S D+            
Sbjct: 5   EVETADLSDKALVSAIREVLASAQSGDTDQYNELVQLMYIKKKKSGDDAMAQPEVPDDVD 64

Query: 74  -VALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 133
            VA   T LK LS +V+C+D + H  LL  I    +WD+ PNV+ +L++LIISLA ++GK
Sbjct: 65  VVAQRETLLKILSHSVACLDDVHHNHLLQLILGTRIWDHKPNVIYALLDLIISLATTSGK 124

Query: 134 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 193
           +++SCLD LV+N       +D         K  EVLSRVH AL  IS LVPLAP  L  I
Sbjct: 125 HLSSCLDTLVSNLRSQPRKLD--------NKMLEVLSRVHAALHKISYLVPLAPSILLPI 184

Query: 194 VVHKMQRVFFKESLTTI--YVENMLRLEKGAL-SEFVGRKILTALVDKLLDLDVEIGWDD 253
           +   M  V  K  L  +  YV+N+L+LE  ++  + VG+ IL  ++ +  DLD EI  DD
Sbjct: 185 LAQSMPSVHDKARLQVVVPYVKNLLKLENSSIIGKVVGKDILMMVMGRFRDLDSEIECDD 244

Query: 254 ILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEH 313
            LQ+D S  +F+MEL+   E                      G ++++ LD L+V +F H
Sbjct: 245 NLQNDSSLAMFDMELDVAVE----------------------GTLVSKLLDDLMVESFNH 304

Query: 314 LESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADM 373
           L+SC+  GRL+EVF+ L  SF+  +L   K KF+QF++FYACSLDPE CG +FA  L + 
Sbjct: 305 LKSCQDAGRLDEVFENLFESFENLILNTQKLKFSQFLMFYACSLDPENCGVKFASKLLEK 364

Query: 374 FVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAH 433
           F+S N+  + R +AV+YLAS+L+R  FL+ S V ++LKRLVD C +Y  T N D  P+ H
Sbjct: 365 FLSSNNNQVTRTNAVTYLASYLARANFLSASFVASMLKRLVDECADYCRTCNDDARPEVH 424

Query: 434 KVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQ 493
           +VFYSGCQAI+YVLCFRMRSILE+P  +SQ  L P+  +L+H+L PL+VCL S+V EFL 
Sbjct: 425 QVFYSGCQAILYVLCFRMRSILEVPHFQSQ--LTPLESVLSHKLDPLRVCLSSVVSEFLI 484

Query: 494 QAKVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWS 553
           QAK   LF  S+ FIF+ L ESE SR+ GG      FFPF P LL+K +  + PHF+  S
Sbjct: 485 QAKACGLFIVSDAFIFDDLSESELSRALGG------FFPF-PWLLEKSNSLISPHFIKRS 544

Query: 554 MVRPTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSI 613
            V+ TY + E        ++ED+                      D D D D+ +N MSI
Sbjct: 545 EVKKTYEQAEVTVYGDTDNEEDS----------------------DDDVDPDNEMNKMSI 573

Query: 614 TPRNSLQYRHD-FVKMPSRIRPSMSP-ESL 626
           TP++S+ +  +  +KMPSRI PS SP ESL
Sbjct: 605 TPKHSVMHETERLLKMPSRISPSTSPRESL 573

[Close]

BLAST of MELO3C006107T3 vs. NCBI nr
Match: gi|659075242|ref|XP_008438040.1| (PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo])

HSP 1 Score: 1243.0 bits (3215), Expect = 0.0e+00
Identity = 625/625 (100.00%), Postives = 625/625 (100.00%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI
Sbjct: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540
           VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR
Sbjct: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540

Query: 541 PTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPR 600
           PTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPR
Sbjct: 541 PTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITPR 600

Query: 601 NSLQYRHDFVKMPSRIRPSMSPESL 626
           NSLQYRHDFVKMPSRIRPSMSPESL
Sbjct: 601 NSLQYRHDFVKMPSRIRPSMSPESL 625

[Close]

BLAST of MELO3C006107T3 vs. NCBI nr
Match: gi|449432152|ref|XP_004133864.1| (PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis sativus])

HSP 1 Score: 1181.8 bits (3056), Expect = 0.0e+00
Identity = 594/624 (95.19%), Postives = 609/624 (97.60%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MGAELENNQAQLH MEDVNLTDAQLVDFIRGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSGAVSCIDII HESLLAAIFKMSLWDYG NVMD+LIELIISLAVSNGK
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YV+SCLDMLVNNFMPPNSYMD LKKPHGLT+K+EVLSRVHTALKDISDLVPLAPLRLEQ 
Sbjct: 121 YVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQK 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VVHKMQRVFF ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ
Sbjct: 181 VVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300
           DDFSKGIFEMELEDDD+TTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES
Sbjct: 241 DDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLES 300

Query: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVS 360
           CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQF++FYACSLDPEVCGARFA+SLADMFVS
Sbjct: 301 CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVS 360

Query: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 420
           CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYG+TLNVDPNPKAHKVF
Sbjct: 361 CNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 420

Query: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAK 480
           YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL+QAK
Sbjct: 421 YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAK 480

Query: 481 VANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540
           VANLFTPSE FIFNGLLES+YSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR
Sbjct: 481 VANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVR 540

Query: 541 PTYAEEEEQEE-DGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITP 600
           PTY EEEE+EE DGGSSDEDAE+FPD I+ENLMDD AMA SYDDQDFDLDSGLN MSITP
Sbjct: 541 PTYDEEEEEEEDDGGSSDEDAEIFPDRIDENLMDDEAMAISYDDQDFDLDSGLNKMSITP 600

Query: 601 RNSLQYRHDFVKMPSRIRPSMSPE 624
           RNSLQYR DFV+MPSRIRPSMSPE
Sbjct: 601 RNSLQYRCDFVQMPSRIRPSMSPE 624

[Close]

BLAST of MELO3C006107T3 vs. NCBI nr
Match: gi|731387678|ref|XP_010649342.1| (PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Vitis vinifera])

HSP 1 Score: 820.5 bits (2118), Expect = 2.0e-234
Identity = 418/632 (66.14%), Postives = 506/632 (80.06%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MG EL  ++A  H+ME+VN +D++LV  +R  L SV LGD+D Y+QL+GV+HH++RL+PD
Sbjct: 1   MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVT LKALSGAVSCID++ H+SLL++IF MSLW+YGP+VMD+L+ELI+SLA S+G 
Sbjct: 61  EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGN 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           Y++  LDMLV+NFMPP S +DFLK+P GL +KD+VLSRVH+ LKDI+DLVPLAP RL  I
Sbjct: 121 YLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           V+ +M  VF KE L  IYVENMLRLE GA+ E VG  +L AL+D+L+DLDVEI W+++LQ
Sbjct: 181 VIQRMPNVFTKEPLIMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPR-ELSRRSLGGNVIAETLDSLIVLTFEHLE 300
           DD SKGIFEMELED +E  DD+  D  EL R  LSR+SLGGN+IAE LDSL+VLTFEHLE
Sbjct: 241 DDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLE 300

Query: 301 SCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFV 360
           SCE  GRL EVF+ L+LSFQ TVL A+KSKFAQFV+FYAC+LDPE CG RFA  LAD FV
Sbjct: 301 SCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFV 360

Query: 361 SCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKV 420
               PPL RMSAV+YLAS+LSRGKFLT S V  IL+RLV WCLEY +  + D NPKAH+V
Sbjct: 361 CSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGDINPKAHQV 420

Query: 421 FYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQA 480
           FYSGCQAIMYVLCFRMRS++ +P L+SQLLL+P+  +L H LSPLKVCLPSIVEEFL+QA
Sbjct: 421 FYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQA 480

Query: 481 KVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMV 540
           K A LFT SETFIF+ LLESE SR+FGG+ERLDMFFPFDPCLLKKCDR++RP+FVYWSM+
Sbjct: 481 KAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMI 540

Query: 541 RPTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDS---GLNNMS 600
           R TY + E+      S +E AE +     +++M+D AMARSYD  D +LD     +N MS
Sbjct: 541 RTTYDDGED-----SSDEEPAEDYEASHPDDVMNDDAMARSYDSHDLELDEFDHSMNKMS 600

Query: 601 ITPRNSLQYRHD---FVKMPSRIRPSMSPESL 626
           ITP+NSL YR      V+MPSRIRPS SPESL
Sbjct: 601 ITPKNSLYYRFGDELKVQMPSRIRPSTSPESL 627

[Close]

BLAST of MELO3C006107T3 vs. NCBI nr
Match: gi|296088515|emb|CBI37506.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 798.9 bits (2062), Expect = 6.4e-228
Identity = 408/629 (64.86%), Postives = 493/629 (78.38%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MG EL  ++A  H+ME+VN +D++LV  +R  L SV LGD+D Y+QL+GV+HH++RL+PD
Sbjct: 1   MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVT LKALSGAVSCID++ H+SLL++IF MSLW+YGP+VMD+L+ELI+SLA S+G 
Sbjct: 61  EVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGN 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           Y++  LDMLV+NFMPP S +DFLK+P GL +KD+VLSRVH+ LKDI+DLVPLAP RL  I
Sbjct: 121 YLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPI 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           V+ +M  VF KE L  IYVENMLRLE GA+ E VG  +L AL+D+L+DLDVEI W+++LQ
Sbjct: 181 VIQRMPNVFTKEPLIMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELPR-ELSRRSLGGNVIAETLDSLIVLTFEHLE 300
           DD SKGIFEMELED +E  DD+  D  EL R  LSR+SLGGN+IAE LDSL+VLTFEHLE
Sbjct: 241 DDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLE 300

Query: 301 SCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFV 360
           SCE  GRL EVF+ L+LSFQ TVL A+KSKFAQFV+FYAC+LDPE CG RFA  LAD FV
Sbjct: 301 SCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFV 360

Query: 361 SCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKV 420
               PPL RMSAV+YLAS+LSRGKFLT S V  IL+RLV WCLEY +  + D NPKAH+V
Sbjct: 361 CSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGDINPKAHQV 420

Query: 421 FYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQA 480
           FYSGCQAIMYVLCFRMRS++ +P L+SQLLL+P+  +L H LSPLKVCLPSIVEEFL+QA
Sbjct: 421 FYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQA 480

Query: 481 KVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMV 540
           K A LFT SETFIF+ LLESE SR+FGG+ERLDMFFPFDPCLLKKCDR++RP+FVYWSM+
Sbjct: 481 KAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMI 540

Query: 541 RPTYAEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSITP 600
           R TY + E+  ++  + D +A   PD                     D D  +N MSITP
Sbjct: 541 RTTYDDGEDSSDEEPAEDYEAS-HPD---------------------DFDHSMNKMSITP 600

Query: 601 RNSLQYRHD---FVKMPSRIRPSMSPESL 626
           +NSL YR      V+MPSRIRPS SPESL
Sbjct: 601 KNSLYYRFGDELKVQMPSRIRPSTSPESL 607

[Close]

BLAST of MELO3C006107T3 vs. NCBI nr
Match: gi|702482820|ref|XP_010033606.1| (PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Eucalyptus grandis])

HSP 1 Score: 791.2 bits (2042), Expect = 1.3e-225
Identity = 400/635 (62.99%), Postives = 503/635 (79.21%), Query Frame = 1


Query: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60
           MG EL N +A   +MEDVN TD +LV  +R  L SVSLGD++ Y++L+GV+HHR+RLSPD
Sbjct: 1   MGVELANERAGFLEMEDVNFTDNELVYHVRTALKSVSLGDSESYDELIGVMHHRERLSPD 60

Query: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGK 120
           EVALLVTCLKALSG VSCID++ HESLL++IF MS+W+YGP VMD+L++LIISLA S+GK
Sbjct: 61  EVALLVTCLKALSGTVSCIDVVHHESLLSSIFGMSMWNYGPEVMDALVDLIISLAASSGK 120

Query: 121 YVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLEQI 180
           YV+SCLDML+ NF+PP SY+  LK+P GL++KD+VLSRVH+AL+ I  LVPLAP+RL  +
Sbjct: 121 YVDSCLDMLIRNFVPPYSYLALLKQPRGLSRKDQVLSRVHSALESIGHLVPLAPMRLLSL 180

Query: 181 VVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQ 240
           VV +M R +  E++   YVENM +LE G++ + VG  +LTA+VD+LLDLD+EIGW+DILQ
Sbjct: 181 VVQRMPRQYDNEAVIMTYVENMFKLESGSMGQLVGSTMLTAVVDRLLDLDLEIGWEDILQ 240

Query: 241 DDFSKGIFEMELEDDDETTDDINEDSSELP-RELSRRSLGGNVIAETLDSLIVLTFEHLE 300
           +D SKGIFEMELED +E  +D N++  ELP + LSR SL GN+IAE LDSL+VLTFE+LE
Sbjct: 241 EDSSKGIFEMELEDLEEDEEDWNDEGGELPGKHLSRNSLRGNIIAEKLDSLLVLTFEYLE 300

Query: 301 SCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFV 360
           SC+  GRL EVF+ LL SF+ TVL AYKSKF+QFV+FYAC+LDPE CG RFA  L D+FV
Sbjct: 301 SCQGRGRLLEVFETLLHSFRITVLNAYKSKFSQFVMFYACALDPENCGVRFARMLLDIFV 360

Query: 361 SCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKV 420
             + PP  RMSAV+YLAS+LSRGKFL+TS +TT+LKRLVDWCL+Y +  + D NP AH+V
Sbjct: 361 CHDHPPNTRMSAVAYLASYLSRGKFLSTSYITTMLKRLVDWCLDYCKVQDEDVNPLAHRV 420

Query: 421 FYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQA 480
           FY+GCQAIMYVLCFRM S++ IPRLKSQL LMPI  +L H+  PLKVCLPS+V EFL+QA
Sbjct: 421 FYAGCQAIMYVLCFRMWSMMSIPRLKSQLFLMPIETILKHKSDPLKVCLPSVVGEFLKQA 480

Query: 481 KVANLFTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMV 540
           + A LFT S+T I + +LE+E SR+FGGLERLD FFPFDPCLLKK DR++RP+F++WSMV
Sbjct: 481 RAARLFTVSKTSISDDILETELSRAFGGLERLDTFFPFDPCLLKKSDRFIRPNFIFWSMV 540

Query: 541 RPTYAEEEEQEEDG-GSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDL---DSGLNNM 600
           + TY ++E+++ED  GSSDED E   D   EN  D   MA S+D++D D+   D  LN M
Sbjct: 541 KTTYDDDEDEDEDAEGSSDEDGEESVDGAVENRGD--GMATSFDERDIDMEEFDYALNKM 600

Query: 601 SITPRNSLQYR-----HDFVKMPSRIRPSMSPESL 626
           SITP+ S  YR      + V+MPSRIRPS SPESL
Sbjct: 601 SITPKQSSMYRFGSGLDELVRMPSRIRPSTSPESL 633

The following BLAST results are available for this feature:

BLAST of MELO3C006107T3 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RRN3_MOUSE	4.5e-40	27.09	RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus G...	[more]
RRN3_PONAB	5.7e-35	26.99	RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii G...	[more]
RRN3_HUMAN	2.2e-34	26.15	RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens G...	[more]
RRN3_SCHPO	1.1e-30	25.30	RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharo...	[more]
RN3P1_HUMAN	1.7e-10	35.66	Putative RRN3-like protein RRN3P1 OS=Homo sapiens GN=RRN3P1 PE=5 SV=1	[more]

BLAST of MELO3C006107T3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7G6_CUCSA	0.0e+00	95.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122360 PE=4 SV=1	[more]
F6I0C5_VITVI	1.4e-234	66.14	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01700 PE=4 SV=...	[more]
A0A059AGW7_EUCGR	9.3e-226	62.99	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02557 PE=4 SV=1	[more]
A0A059AHZ5_EUCGR	2.3e-224	62.89	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02557 PE=4 SV=1	[more]
W9QGA7_9ROSA	3.7e-214	61.33	Uncharacterized protein OS=Morus notabilis GN=L484_016497 PE=4 SV=1	[more]

BLAST of MELO3C006107T3 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34750.1	1.5e-174	52.03	RNA polymerase I specific transcription initiation factor RRN3 prote...	[more]
AT1G30590.1	5.5e-153	49.10	RNA polymerase I specific transcription initiation factor RRN3 prote...	[more]
AT2G39240.1	2.8e-125	43.02	RNA polymerase I specific transcription initiation factor RRN3 prote...	[more]

BLAST of MELO3C006107T3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075242\|ref\|XP_008438040.1\|	0.0e+00	100.00	PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucum...	[more]
gi\|449432152\|ref\|XP_004133864.1\|	0.0e+00	95.19	PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucum...	[more]
gi\|731387678\|ref\|XP_010649342.1\|	2.0e-234	66.14	PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Vitis...	[more]
gi\|296088515\|emb\|CBI37506.3\|	6.4e-228	64.86	unnamed protein product [Vitis vinifera]	[more]
gi\|702482820\|ref\|XP_010033606.1\|	1.3e-225	62.99	PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Eucal...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007991	RNA_pol_I_trans_ini_fac_RRN3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006107	MELO3C006107	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006107T3	MELO3C006107T3-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006107T3.cds1	MELO3C006107T3.cds1	CDS
MELO3C006107T3.cds2	MELO3C006107T3.cds2	CDS
MELO3C006107T3.cds3	MELO3C006107T3.cds3	CDS
MELO3C006107T3.cds4	MELO3C006107T3.cds4	CDS
MELO3C006107T3.cds5	MELO3C006107T3.cds5	CDS
MELO3C006107T3.cds6	MELO3C006107T3.cds6	CDS
MELO3C006107T3.cds7	MELO3C006107T3.cds7	CDS
MELO3C006107T3.cds8	MELO3C006107T3.cds8	CDS
MELO3C006107T3.cds9	MELO3C006107T3.cds9	CDS
MELO3C006107T3.cds10	MELO3C006107T3.cds10	CDS
MELO3C006107T3.cds11	MELO3C006107T3.cds11	CDS
MELO3C006107T3.cds12	MELO3C006107T3.cds12	CDS
MELO3C006107T3.cds13	MELO3C006107T3.cds13	CDS
MELO3C006107T3.cds14	MELO3C006107T3.cds14	CDS
MELO3C006107T3.cds15	MELO3C006107T3.cds15	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007991	RNA polymerase I specific transcription initiation factor RRN3	PANTHER	PTHR12790	TRANSCRIPTION INITIATION FACTOR IA RRN3	coord: 6..625 score: 1.4E
IPR007991	RNA polymerase I specific transcription initiation factor RRN3	PFAM	PF05327	RRN3	coord: 20..540 score: 1.7E
None	No IPR available	PANTHER	PTHR12790:SF0	RNA POLYMERASE I-SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3-RELATED	coord: 6..625 score: 1.4E