MELO3C006078T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006078T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	WRKY transcription factor 19
Location	chr6 : 911771 .. 912614 (+)
Sequence length	667

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAACTCACCAACAAATGGAGGAGGAACATCACCAACTACAACAACCATCGCCGCCGCCGCCTCCATGTTCGGATCCTCTTGCAACCTCTCTAGAGATCGATTGGATCGCAGTTCTCTATGGGCAAGAGGCCATCGGAGACTTACCACCAGCGTCATCAACTTGTGAGTCATCAGAAAGGAGAAGGGACGAAGAGAAAACGAATCGGAGGAAGAATGGTGGCCGACGGTGGAGAAAGGCCGCTGGCCGTCGAAGGTTTGAGTTTCAGACAAGGAGTACCGAAGATATTCTTGATGATGGATATCGGTGGCGCAAGTACGGGCAAAAAGCTGTCAAACATAGCCTCTATCCCAGGTATAAACCATAACGAAATTTCAAACTTCGATTATAGACATCGTATATATGTCGATGAGATGATATATAAGGGTTCTTTAAGCTTAATTTTTTGTTTTTCCGATTTATAATTTGGAGTTTATGTATCCGATATTGATTTATAAAGTACTTACGATGTAATTTATTGTGTTGGTGAAGGAGCTACTATAAGTGCACATATGTAACATGCAATGTGAAGAAACAAATTCAAAGGCTATCAAAAGACAGAAGCATTGTTGTGACAACTTATGAGGGAATTCACAACCATCCTTCTCATATCCTCATGCAAACCCTAACTCCTCTTCTCAAACAAATTCACACTTCCTTTCCACTTTCTAAATTATTTATGAATTATAATTAGTAACACACACATATGTATATGTTTTGTTTGTTCTCTTCTATATGTTACTAATCAAGAGTCATCAATTTCATAACTTGATTTATATCAAATTTATTGATAAAATATTGGAATT

mRNA sequence

ACAACTCACCAACAAATGGAGGAGGAACATCACCAACTACAACAACCATCGCCGCCGCCGCCTCCATGTTCGGATCCTCTTGCAACCTCTCTAGAGATCGATTGGATCGCAGTTCTCTATGGGCAAGAGGCCATCGGAGACTTACCACCAGCGTCATCAACTTGTGAGTCATCAGAAAGGAGAAGGGACGAAGAGAAAACGAATCGGAGGAAGAATGGTGGCCGACGGTGGAGAAAGGCCGCTGGCCGTCGAAGGTTTGAGTTTCAGACAAGGAGTACCGAAGATATTCTTGATGATGGATATCGGTGGCGCAAGTACGGGCAAAAAGCTGTCAAACATAGCCTCTATCCCAGGAGCTACTATAAGTGCACATATGTAACATGCAATGTGAAGAAACAAATTCAAAGGCTATCAAAAGACAGAAGCATTGTTGTGACAACTTATGAGGGAATTCACAACCATCCTTCTCATATCCTCATGCAAACCCTAACTCCTCTTCTCAAACAAATTCACACTTCCTTTCCACTTTCTAAATTATTTATGAATTATAATTAGTAACACACACATATGTATATGTTTTGTTTGTTCTCTTCTATATGTTACTAATCAAGAGTCATCAATTTCATAACTTGATTTATATCAAATTTATTGATAAAATATTGGAATT

Coding sequence (CDS)

ATGGAGGAGGAACATCACCAACTACAACAACCATCGCCGCCGCCGCCTCCATGTTCGGATCCTCTTGCAACCTCTCTAGAGATCGATTGGATCGCAGTTCTCTATGGGCAAGAGGCCATCGGAGACTTACCACCAGCGTCATCAACTTGTGAGTCATCAGAAAGGAGAAGGGACGAAGAGAAAACGAATCGGAGGAAGAATGGTGGCCGACGGTGGAGAAAGGCCGCTGGCCGTCGAAGGTTTGAGTTTCAGACAAGGAGTACCGAAGATATTCTTGATGATGGATATCGGTGGCGCAAGTACGGGCAAAAAGCTGTCAAACATAGCCTCTATCCCAGGAGCTACTATAAGTGCACATATGTAACATGCAATGTGAAGAAACAAATTCAAAGGCTATCAAAAGACAGAAGCATTGTTGTGACAACTTATGAGGGAATTCACAACCATCCTTCTCATATCCTCATGCAAACCCTAACTCCTCTTCTCAAACAAATTCACACTTCCTTTCCACTTTCTAAATTATTTATGAATTATAATTAG

Protein sequence

MEEEHHQLQQPSPPPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCESSERRRDEEKTNRRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCNVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMNYN*

Homology

[Close]

BLAST of MELO3C006078T1 vs. Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.2e-35
Identity = 73/146 (50.00%), Postives = 94/146 (64.38%), Query Frame = 1


Query: 41  GDLPPASSTCESSERRRDEEKTNRRKNGG----------------RRWRKAAGRR----- 100
           GD+ P+SS+C  +      +  N R  GG                +   K  G+R     
Sbjct: 41  GDVGPSSSSCTPAGYHLSAQLENFRGGGGEMGGLVSNNSNNSDHNKNCNKGKGKRTLAMQ 100

Query: 101 RFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCNVKKQIQRLSKDRSIV 160
           R  F TRS +D+LDDGYRWRKYGQK+VK++ +PRSYY+CTY TCNVKKQ+QRL+KD ++V
Sbjct: 101 RIAFHTRSDDDVLDDGYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVV 160

Query: 161 VTTYEGIHNHPSHILMQTLTPLLKQI 166
           VTTYEG+HNHP   LM+TL+PLL+Q+
Sbjct: 161 VTTYEGVHNHPCEKLMETLSPLLRQL 186

[Close]

BLAST of MELO3C006078T1 vs. Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-33
Identity = 65/108 (60.19%), Postives = 81/108 (75.00%), Query Frame = 1


Query: 69  GRRWRKAAGRR--RFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCNVK 128
           G+  ++   R+  R  F TRS +D+LDDGYRWRKYGQK+VKH+ +PRSYY+CTY TCNVK
Sbjct: 72  GKELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVK 131

Query: 129 KQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKL 175
           KQ+QRL+KD ++VVTTYEG+HNHP   LM+TL PLL+Q+      S L
Sbjct: 132 KQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLNPLLRQLQFLSSFSNL 179

[Close]

BLAST of MELO3C006078T1 vs. Swiss-Prot
Match: WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.4e-33
Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 1


Query: 80  RFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCNVKKQIQRLSKDRSIV 139
           RF F+T+S  DILDDGYRWRKYGQK+VK+SLYPRSYY+CT   CNVKKQ+QRLSK+ SIV
Sbjct: 17  RFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSIV 76

Query: 140 VTTYEGIHNHPSHILMQTLTPLLKQI 166
            TTYEGIHNHP   LMQTLTPLL Q+
Sbjct: 77  ETTYEGIHNHPCEELMQTLTPLLHQL 102

[Close]

BLAST of MELO3C006078T1 vs. Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-28
Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 1


Query: 54  ERRRDEEKTNRRKNGG-----RRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKH 113
           E  + EE++++ ++ G        +K   ++R+ FQTRS  DILDDGYRWRKYGQKAVK+
Sbjct: 23  ELHQGEEESSKVRSEGCSKSVESSKKKGKKQRYAFQTRSQVDILDDGYRWRKYGQKAVKN 82

Query: 114 SLYPRSYYKCTYVTCNVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLL--KQIH 170
           + +PRSYY+CTY  CNVKKQ+QRL+ D+ +VVTTYEG+H+HP     +    +L   QI+
Sbjct: 83  NKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTENFEHILTQMQIY 142

[Close]

BLAST of MELO3C006078T1 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.4e-25
Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 1


Query: 51  ESSERRRDEEKTNRRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSL 110
           E  +++++++ T  +    ++ +K A   RF F T+S  D LDDGYRWRKYGQKAVK+S 
Sbjct: 179 EEGDQQQEQKGTKPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSP 238

Query: 111 YPRSYYKCTYVTCNVKKQIQRLSKDRSIVVTTYEGIHNHP------SHILMQTLTPLL 163
           YPRSYY+CT V C VKK+++R S D SIV+TTYEG H HP       HI M T +P+L
Sbjct: 239 YPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHPFPMTPRGHIGMLT-SPIL 295

[Close]

BLAST of MELO3C006078T1 vs. TrEMBL
Match: A0A0A0L635_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121060 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 6.4e-87
Identity = 160/181 (88.40%), Postives = 166/181 (91.71%), Query Frame = 1


Query: 1   MEEEHHQLQQPSP---PPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCESSERRR 60
           MEEE+HQLQ P P   P  PCSDPLATSLEIDWIAVL GQEA  DLPP SSTCES ERRR
Sbjct: 1   MEEENHQLQHPPPLLFPSLPCSDPLATSLEIDWIAVLSGQEATRDLPPTSSTCESLERRR 60

Query: 61  DEEKTNRRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYK 120
           DEEK+N+RK GGR+ RKA GRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSL+PRSYYK
Sbjct: 61  DEEKSNQRKKGGRQRRKAVGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLHPRSYYK 120

Query: 121 CTYVTCNVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMN 179
           CTYVTCNVKKQ+QRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMN
Sbjct: 121 CTYVTCNVKKQVQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMN 180

[Close]

BLAST of MELO3C006078T1 vs. TrEMBL
Match: A5AFM8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006168 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.7e-44
Identity = 95/162 (58.64%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 5   HHQLQQPSPPPPPCSDPLATSL-EIDWIAVLYGQEAIGDLPPASSTCESSERRRDEEKTN 64
           H  LQ P PP PP     A  L +IDW  +L  Q  + DL P +    S     ++    
Sbjct: 2   HPHLQLPPPPLPPLPPLQAQILGDIDWATLLSAQTGLSDLYPRAEGTSSVMAEEEKGSIK 61

Query: 65  RRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTC 124
            R+ G R  RKA  R RF FQTRS +DILDDGYRWRKYGQKAVK+S+YPRSYY+CT+ TC
Sbjct: 62  DRRKGVRTTRKAT-RPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSIYPRSYYRCTHHTC 121

Query: 125 NVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQI 166
           +VKKQ+QRLSKD S+VVTTYEGIHNHP   LM+TL+PLLKQI
Sbjct: 122 DVKKQVQRLSKDTSVVVTTYEGIHNHPCEKLMETLSPLLKQI 162

[Close]

BLAST of MELO3C006078T1 vs. TrEMBL
Match: D7UCE6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02150 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.5e-43
Identity = 93/161 (57.76%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 5   HHQLQQPSPPPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCESSERRRDEEKTNR 64
           H  LQ P PP PP    +    +IDW  +L  Q  + DL P +    S     ++     
Sbjct: 38  HPHLQLPPPPLPPLQAQILG--DIDWATLLSAQTGLSDLYPRAEGTSSVMAEEEKGSIKD 97

Query: 65  RKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCN 124
           R+ G R  RKA  R RF FQTRS +DILDDGYRWRKYGQKAVK+S+YPRSYY+CT+ TC+
Sbjct: 98  RRKGVRTTRKAT-RPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSIYPRSYYRCTHHTCD 157

Query: 125 VKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQI 166
           VKKQ+QRLSKD S+VVTTYEGIHNHP   LM+TL+PLLKQI
Sbjct: 158 VKKQVQRLSKDTSVVVTTYEGIHNHPCEKLMETLSPLLKQI 195

[Close]

BLAST of MELO3C006078T1 vs. TrEMBL
Match: A0A140H8N5_MANES (WRKY transcription factor 31 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 97/160 (60.62%), Postives = 115/160 (71.88%), Query Frame = 1


Query: 6   HQLQQPSPPPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCESSERRRDEEKTNRR 65
           H     S   PP  DP      IDW+++L GQ A+GD  P  ST ES+    +E+K +RR
Sbjct: 12  HLFSPSSSLHPPFIDPQLLP-HIDWVSLLSGQAAVGDERP--STIESASVIAEEQK-DRR 71

Query: 66  KNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCNV 125
           K+G  R  K   R RF FQT+S +DILDDGYRWRKYGQK+VK+S YPRSYY+CT  TCNV
Sbjct: 72  KSG--RLMKKHSRPRFAFQTKSPDDILDDGYRWRKYGQKSVKNSAYPRSYYRCTNHTCNV 131

Query: 126 KKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQI 166
           KKQ+QRLSKD S+VVTTYEGIHNHP   LM+TLTPLLKQ+
Sbjct: 132 KKQVQRLSKDTSMVVTTYEGIHNHPCEKLMETLTPLLKQM 165

[Close]

BLAST of MELO3C006078T1 vs. TrEMBL
Match: A0A140H8M9_MANES (WRKY transcription factor 25 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.6e-42
Identity = 97/179 (54.19%), Postives = 114/179 (63.69%), Query Frame = 1


Query: 9   QQPSPPPPPCSDPLATSL----------------------EIDWIAVLYGQEAIGDLPPA 68
           + P PPPPP    L  SL                      +IDW+++L  Q   G+    
Sbjct: 5   EAPPPPPPPPLPQLPPSLFSPSLLASSSLQPPFIEPQVLPDIDWVSLLSCQYGEGE--NK 64

Query: 69  SSTCESSERRRDEEKTNRRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAV 128
           + T ES+    +EEK N+ +    R  K   R RF FQTRS +DILDDGYRWRKYGQKAV
Sbjct: 65  AKTLESASVISEEEKGNKDRRKCGRMMKKHSRPRFAFQTRSADDILDDGYRWRKYGQKAV 124

Query: 129 KHSLYPRSYYKCTYVTCNVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQI 166
           K+S YPRSYY+CTY TCNVKKQ+QRLSKD SIVVTTYEGIHNHP   LM+TLTPLLKQ+
Sbjct: 125 KNSAYPRSYYRCTYPTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQM 181

[Close]

BLAST of MELO3C006078T1 vs. TAIR10
Match: AT1G64000.1 (AT1G64000.1 WRKY DNA-binding protein 56)

HSP 1 Score: 148.7 bits (374), Expect = 3.5e-36
Identity = 73/146 (50.00%), Postives = 94/146 (64.38%), Query Frame = 1


Query: 41  GDLPPASSTCESSERRRDEEKTNRRKNGG----------------RRWRKAAGRR----- 100
           GD+ P+SS+C  +      +  N R  GG                +   K  G+R     
Sbjct: 41  GDVGPSSSSCTPAGYHLSAQLENFRGGGGEMGGLVSNNSNNSDHNKNCNKGKGKRTLAMQ 100

Query: 101 RFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCNVKKQIQRLSKDRSIV 160
           R  F TRS +D+LDDGYRWRKYGQK+VK++ +PRSYY+CTY TCNVKKQ+QRL+KD ++V
Sbjct: 101 RIAFHTRSDDDVLDDGYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVV 160

Query: 161 VTTYEGIHNHPSHILMQTLTPLLKQI 166
           VTTYEG+HNHP   LM+TL+PLL+Q+
Sbjct: 161 VTTYEGVHNHPCEKLMETLSPLLRQL 186

[Close]

BLAST of MELO3C006078T1 vs. TAIR10
Match: AT5G41570.1 (AT5G41570.1 WRKY DNA-binding protein 24)

HSP 1 Score: 144.1 bits (362), Expect = 8.7e-35
Identity = 65/108 (60.19%), Postives = 81/108 (75.00%), Query Frame = 1


Query: 69  GRRWRKAAGRR--RFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCNVK 128
           G+  ++   R+  R  F TRS +D+LDDGYRWRKYGQK+VKH+ +PRSYY+CTY TCNVK
Sbjct: 72  GKELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVK 131

Query: 129 KQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKL 175
           KQ+QRL+KD ++VVTTYEG+HNHP   LM+TL PLL+Q+      S L
Sbjct: 132 KQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLNPLLRQLQFLSSFSNL 179

[Close]

BLAST of MELO3C006078T1 vs. TAIR10
Match: AT2G46130.1 (AT2G46130.1 WRKY DNA-binding protein 43)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-34
Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 1


Query: 80  RFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCNVKKQIQRLSKDRSIV 139
           RF F+T+S  DILDDGYRWRKYGQK+VK+SLYPRSYY+CT   CNVKKQ+QRLSK+ SIV
Sbjct: 17  RFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSIV 76

Query: 140 VTTYEGIHNHPSHILMQTLTPLLKQI 166
            TTYEGIHNHP   LMQTLTPLL Q+
Sbjct: 77  ETTYEGIHNHPCEELMQTLTPLLHQL 102

[Close]

BLAST of MELO3C006078T1 vs. TAIR10
Match: AT5G13080.1 (AT5G13080.1 WRKY DNA-binding protein 75)

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-29
Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 1


Query: 54  ERRRDEEKTNRRKNGG-----RRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKH 113
           E  + EE++++ ++ G        +K   ++R+ FQTRS  DILDDGYRWRKYGQKAVK+
Sbjct: 23  ELHQGEEESSKVRSEGCSKSVESSKKKGKKQRYAFQTRSQVDILDDGYRWRKYGQKAVKN 82

Query: 114 SLYPRSYYKCTYVTCNVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLL--KQIH 170
           + +PRSYY+CTY  CNVKKQ+QRL+ D+ +VVTTYEG+H+HP     +    +L   QI+
Sbjct: 83  NKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTENFEHILTQMQIY 142

[Close]

BLAST of MELO3C006078T1 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 1


Query: 51  ESSERRRDEEKTNRRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSL 110
           E  +++++++ T  +    ++ +K A   RF F T+S  D LDDGYRWRKYGQKAVK+S 
Sbjct: 179 EEGDQQQEQKGTKPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSP 238

Query: 111 YPRSYYKCTYVTCNVKKQIQRLSKDRSIVVTTYEGIHNHP------SHILMQTLTPLL 163
           YPRSYY+CT V C VKK+++R S D SIV+TTYEG H HP       HI M T +P+L
Sbjct: 239 YPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHPFPMTPRGHIGMLT-SPIL 295

[Close]

BLAST of MELO3C006078T1 vs. NCBI nr
Match: gi|659075133|ref|XP_008437983.1| (PREDICTED: probable WRKY transcription factor 75 [Cucumis melo])

HSP 1 Score: 377.9 bits (969), Expect = 1.0e-101
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1


Query: 1   MEEEHHQLQQPSPPPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCESSERRRDEE 60
           MEEEHHQLQQPSPPPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCESSERRRDEE
Sbjct: 1   MEEEHHQLQQPSPPPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCESSERRRDEE 60

Query: 61  KTNRRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTY 120
           KTNRRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTY
Sbjct: 61  KTNRRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTY 120

Query: 121 VTCNVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMNYN 180
           VTCNVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMNYN
Sbjct: 121 VTCNVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMNYN 179

[Close]

BLAST of MELO3C006078T1 vs. NCBI nr
Match: gi|449433065|ref|XP_004134318.1| (PREDICTED: probable WRKY transcription factor 43 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 9.2e-87
Identity = 160/181 (88.40%), Postives = 166/181 (91.71%), Query Frame = 1


Query: 1   MEEEHHQLQQPSP---PPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCESSERRR 60
           MEEE+HQLQ P P   P  PCSDPLATSLEIDWIAVL GQEA  DLPP SSTCES ERRR
Sbjct: 1   MEEENHQLQHPPPLLFPSLPCSDPLATSLEIDWIAVLSGQEATRDLPPTSSTCESLERRR 60

Query: 61  DEEKTNRRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYK 120
           DEEK+N+RK GGR+ RKA GRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSL+PRSYYK
Sbjct: 61  DEEKSNQRKKGGRQRRKAVGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLHPRSYYK 120

Query: 121 CTYVTCNVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMN 179
           CTYVTCNVKKQ+QRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMN
Sbjct: 121 CTYVTCNVKKQVQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQIHTSFPLSKLFMN 180

[Close]

BLAST of MELO3C006078T1 vs. NCBI nr
Match: gi|147841419|emb|CAN73363.1| (hypothetical protein VITISV_006168 [Vitis vinifera])

HSP 1 Score: 185.3 bits (469), Expect = 9.6e-44
Identity = 95/162 (58.64%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 5   HHQLQQPSPPPPPCSDPLATSL-EIDWIAVLYGQEAIGDLPPASSTCESSERRRDEEKTN 64
           H  LQ P PP PP     A  L +IDW  +L  Q  + DL P +    S     ++    
Sbjct: 2   HPHLQLPPPPLPPLPPLQAQILGDIDWATLLSAQTGLSDLYPRAEGTSSVMAEEEKGSIK 61

Query: 65  RRKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTC 124
            R+ G R  RKA  R RF FQTRS +DILDDGYRWRKYGQKAVK+S+YPRSYY+CT+ TC
Sbjct: 62  DRRKGVRTTRKAT-RPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSIYPRSYYRCTHHTC 121

Query: 125 NVKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQI 166
           +VKKQ+QRLSKD S+VVTTYEGIHNHP   LM+TL+PLLKQI
Sbjct: 122 DVKKQVQRLSKDTSVVVTTYEGIHNHPCEKLMETLSPLLKQI 162

[Close]

BLAST of MELO3C006078T1 vs. NCBI nr
Match: gi|731421623|ref|XP_002275528.3| (PREDICTED: probable WRKY transcription factor 24 [Vitis vinifera])

HSP 1 Score: 184.1 bits (466), Expect = 2.1e-43
Identity = 93/161 (57.76%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 5   HHQLQQPSPPPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCESSERRRDEEKTNR 64
           H  LQ P PP PP    +    +IDW  +L  Q  + DL P +    S     ++     
Sbjct: 38  HPHLQLPPPPLPPLQAQILG--DIDWATLLSAQTGLSDLYPRAEGTSSVMAEEEKGSIKD 97

Query: 65  RKNGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCN 124
           R+ G R  RKA  R RF FQTRS +DILDDGYRWRKYGQKAVK+S+YPRSYY+CT+ TC+
Sbjct: 98  RRKGVRTTRKAT-RPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSIYPRSYYRCTHHTCD 157

Query: 125 VKKQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQI 166
           VKKQ+QRLSKD S+VVTTYEGIHNHP   LM+TL+PLLKQI
Sbjct: 158 VKKQVQRLSKDTSVVVTTYEGIHNHPCEKLMETLSPLLKQI 195

[Close]

BLAST of MELO3C006078T1 vs. NCBI nr
Match: gi|743828401|ref|XP_011023269.1| (PREDICTED: probable WRKY transcription factor 43 [Populus euphratica])

HSP 1 Score: 181.0 bits (458), Expect = 1.8e-42
Identity = 92/159 (57.86%), Postives = 111/159 (69.81%), Query Frame = 1


Query: 8   LQQPSPPPPPCSDPLATSLEIDWIAVLYGQEAIGDLPPASSTCES-SERRRDEEKTNRRK 67
           L   S P P   +P     +IDW  +L GQ  +G+  P   +    +E    EEK N+ +
Sbjct: 31  LPSSSLPYPSIIEPQVLP-DIDWAGLLSGQSQLGEKRPVMESASMVAENGAGEEKGNKDE 90

Query: 68  NGGRRWRKAAGRRRFEFQTRSTEDILDDGYRWRKYGQKAVKHSLYPRSYYKCTYVTCNVK 127
             G R +KA  R RF FQTRS +DILDDGYRWRKYGQKAVK+S YPRSYY+CT+ TCNVK
Sbjct: 91  KKGGRMKKAPTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNSKYPRSYYRCTHHTCNVK 150

Query: 128 KQIQRLSKDRSIVVTTYEGIHNHPSHILMQTLTPLLKQI 166
           KQ+QRLSKD SIVVTTYEG+H+HP   LM+TLTPLLKQ+
Sbjct: 151 KQVQRLSKDTSIVVTTYEGVHDHPCEKLMETLTPLLKQM 188

The following BLAST results are available for this feature:

BLAST of MELO3C006078T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK56_ARATH	6.2e-35	50.00	Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=...	[more]
WRK24_ARATH	1.5e-33	60.19	Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=...	[more]
WRK43_ARATH	3.4e-33	76.74	Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=...	[more]
WRK75_ARATH	1.9e-28	50.41	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=...	[more]
WRK48_ARATH	3.4e-25	50.85	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=...	[more]

BLAST of MELO3C006078T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L635_CUCSA	6.4e-87	88.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121060 PE=4 SV=1	[more]
A5AFM8_VITVI	6.7e-44	58.64	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006168 PE=4 SV=1	[more]
D7UCE6_VITVI	1.5e-43	57.76	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02150 PE=4 SV=...	[more]
A0A140H8N5_MANES	1.3e-42	60.63	WRKY transcription factor 31 OS=Manihot esculenta PE=2 SV=1	[more]
A0A140H8M9_MANES	1.6e-42	54.19	WRKY transcription factor 25 OS=Manihot esculenta PE=2 SV=1	[more]

BLAST of MELO3C006078T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64000.1	3.5e-36	50.00	WRKY DNA-binding protein 56	[more]
AT5G41570.1	8.7e-35	60.19	WRKY DNA-binding protein 24	[more]
AT2G46130.1	1.9e-34	76.74	WRKY DNA-binding protein 43	[more]
AT5G13080.1	1.1e-29	50.41	WRKY DNA-binding protein 75	[more]
AT5G49520.1	1.9e-26	50.85	WRKY DNA-binding protein 48	[more]

BLAST of MELO3C006078T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075133\|ref\|XP_008437983.1\|	1.0e-101	100.00	PREDICTED: probable WRKY transcription factor 75 [Cucumis melo]	[more]
gi\|449433065\|ref\|XP_004134318.1\|	9.2e-87	88.40	PREDICTED: probable WRKY transcription factor 43 [Cucumis sativus]	[more]
gi\|147841419\|emb\|CAN73363.1\|	9.6e-44	58.64	hypothetical protein VITISV_006168 [Vitis vinifera]	[more]
gi\|731421623\|ref\|XP_002275528.3\|	2.1e-43	57.76	PREDICTED: probable WRKY transcription factor 24 [Vitis vinifera]	[more]
gi\|743828401\|ref\|XP_011023269.1\|	1.8e-42	57.86	PREDICTED: probable WRKY transcription factor 43 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006078	MELO3C006078	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C006078T1	MELO3C006078T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C006078T1.cds1	MELO3C006078T1.cds1	CDS
MELO3C006078T1.cds2	MELO3C006078T1.cds2	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 79..150 score: 1.7
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 93..150 score: 2.7
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 92..151 score: 8.5
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 87..152 score: 2
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 84..150 score: 1.83
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 51..165 score: 1.7
None	No IPR available	PANTHER	PTHR31221:SF7	WRKY TRANSCRIPTION FACTOR 24-RELATED	coord: 51..165 score: 1.7