MELO3C006058T2 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C006058T2
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUbiquitin conjugating enzyme
Locationchr6 : 822537 .. 826554 (+)
Sequence length938
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCACGTTACGCTTTCCGCCAACTGGGTTCGTTGGCTTTGTTCATTTTCCCGCACGCGACATTTCCGCCATTTTCCCCCTCAGCTTTCTCGTCGGAGTGGCCCCTCCAGATTACCGTCCATGGCGTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACTTCCTGCAGCGCCGGTTCAGTATTCTTTCTACTCTACTCCCTTTTTGCTATCTACTTATTTCTACACCTTTTTAAGGTCGATCTACTGATTGCGTCCTTACAACGAGCATCCGTGACTTAGAACAACTTTCTTCTTCTTCTTTTATTTGTAAATTAAGTGGATCCAAATGTTTGTTTGTGGATTGCGTGAAATAGTATTAACTCAGAAATTCAATTATCATGTTCATAATTAGCTAAGCATATGGAAGTCTAGGAAAATCGGTTTTGGACTTTGTAGCGTTCACCTGCCATCTCAAATTTACGGTTTAAGTAAGGAATATGGTTTCTTGGTTGGCTCTTCTCAAAATAATTGATCATATTGTGGAATGGAATTTGGATAGAAACTGAAGCATGCATTGTAGTTTGATTTATTGCATATGCTATGGTTGTTGAAGCAACACTCTATTGAGTAGGAAACTATAGATACCAGTGGATGTACTGCTTTACTATAGTTTTCTATATTCTGAAGCGCGATTCTAAGAATCTTCAAGTTTGAATTATGGTCGATTAAAAAATGGAGCTGTTCAGAGCGGTGTAATCGCTTAAGATTTTAGTAGGAGATCATAAATATTTTAACAAAAATAGGTTGGGTATAATTTACGCTCTGTGTCTGAATTAGATCAGAAAAGAATCAAATGCCACAATATAAGACAATTGTTAGATGATTTATTTTTTACTTAAATTAGTCTGTGTTTTATTAATCCTATTTTGTTTCTCCTTCAAATGCCACAATATAAGACAATAAGTTGTTCTGTAACAGGTCCTGTGGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGCCCTCCAGACAGTCCTTATGCAGGAGGGGTTTTTTTAATTACTATTCACTTCCCTCCCGATTATCCATTTAAGCCTCCTAAGGTATGGCATAAAATCTGACATATCTGGTTATGGTCAACATTTTCTGTAGCCCGTTATTACCGGTTTGTGTCATTTGAAATAATTTGTCACCATATATGGTTCTGGTTTCATTAGTTACTCTCGTGGCTTCAATATATGTGTGTTGTCACTGTGTTTAGATCTTATTTGATTAAAACCTTAGTGAAGTCAGTGCTGGAAGTTGTTTGCACACTTCATGAGCTAAACAGGCTGCTATTGGGGGTCATTCGGGTAAATAGGTTACTATCTGATATCTGCAAATTATATTTTGTGGCAGATGTATTGACCATACAAAAGCCGCACTTTGAAAACTAAATATATAAACCGCATTTCACATTTGAGGTTATTGATATAGGCTTACTGCCTATTTCACCTTAGTAAGCACTATTTGTAGCTGAATGTAAGAACTCGATCTGGGAAGGTAATTGTGATGACATAATTTAGGTCAGTTAAGTATAACTTAAAGCTTAGTTTTATCTAGAGGTCTTGTTAGGTTATGGGACACCCATTTGTGGATGGAGCTCCCTTTTTTCTTGAGTTTGGCTAGAGTTCAAATCCTGGGAGTTTGTTTCTTAATTTCAGGAATTTTTATCTCTGATCTAATGTGGAACCATAGGTTCTTTTTGTAGACCCTAAATCATGGTGGGCTGATCGCGCCCTGCCGACTTTAGGGTCAAAATCCTAAAATCTGTCTTCCTTGAGTGGTGCAATGTGTGCAGGTCTAACTTTGAAGATATCTTCTCAATTTTTGTGGTGCCCTTGTACCTAGAGCATGTGGAGGTGTATTTTGTTTTATATTTCAATTTTGAGGTGGTTTTCTGCTACGCATCAATATTTTTATTCTCTTGTGAGGAGGTCATCCATTTAAAGAAAAGAGACTATCAAGGTCATCTTTTGGGAGAATTGGCTGGAAAGAAATAGCAGAAATTTTCAAGGGATAGATGTGGGTCTTTTTATGCAATTTTGAGATCTTGTTTCTTATGTGGTTCTTTCTTGTAGTGGTTTTGATTAAATCTTGCTAATTGGAGGCTTTTGGCATCATCACTGGCTATAGTGGGAGAAGAAGTCTTATCTTTCCCTTCTCTTCTGTTTTCCTTCTTCCTTGACAAAATTTTGAGTTTTTTGAGCTTGTACTATTATTTCTATGGATCATTAATTATGCCACTTTATATAGGCCATAGGGAGTCTTTACCTATAAGTTTTTACGTTGTTTCAATTTATTTTTGTTTAGGTTGCTTTCAGGACAAAAGTTTTTCACCCAAACATCAACAGTAACGGTAGTATTTGCCTGGACATCTTGAAAGAGCAATGGAGTCCTGCTTTGACTATATCAAAGGTTTTGACCTCTTGACAATTTTGACATTCAAGTCCTTGATGTTTGAAATCCATTATCATATGCCTCCTTTGCACCATGGCTTTGGATCAAATTCTTTAAATTAAGTGTCGGGCACCATTTATGATTTTCTTCTTTACTAGGGATTTAAGACACTAAACTGATTACTTATATTGAAGATGAAAAAAACCCACTAAGTTGATTTATTATCGTTCCTGAATCCCGATGACGGATACTAACTCAACATATTTAATGATGTGATTGGCAATTGTACTAAGAGTGCTCAACACTGATGTACAGTTTTCACATTTCATGCCATCTTTATTTCATTTCAGTAGTTTTTTTAACGTTGCATTACCAGTTCTATTAATAAAAAAATTGTAAGGAGAAGCAGAGATGGTATAAAAAAAATTAAATCCAAGAAATCATCATGTGAAAAAAAAGCTAAGCTATCAACTTAGACCAAATATTGAAAAAGTAGGATGCGATTATATTTGAAACACAACAAGAGTTTAGATATGCTGCTTTTGTCATCAAAATCCTGGTGGGGAATAAGAGGATGGGTGACAGCATGATATTCTGGTTAGATTTCAGTTTTTATGAACTTCATACTGTAAACTTGGAAGGGTTACTTAGCATTTAAGGGGTGAAATGGGTGTCAGTGGTCGCCGTCCATTGTTGACATGGGGAGATCGTGGTCTGTAATTCTGAGTCTGTTTTCCTCTGCTAAAATTCCAGATCTTTCCTAATTTGGACGGTATGCTGCATCTTATTTCTTAGAATATTGGGATCATTGTCTGCTCTGCAGCGTCTTTGACAAACATCTTTGAGAATAGGGAGTGACTGTCAATGATTTTCTGCATGTCAATTTCATTATGTTCGTAGCTCTGATTAATGCCACATACAGTTTTTTAAGTGGTTGGGAAGGGTTGTTTCATATTCAGGTGTTGCTTTCTATTTGCTCCCTTTTGACCGATGCGAACCCAGATGATCCACTAGTGCCAGAAATTGCTCATCTGTACAAGACCGATAGGGCCAAGTATGAGACAACTGCAAGGAGCTGGACTCAGAAATATGCTATGGGCTAGTATGTATTACGGGAAGGGCATGAGGGATGTTGCTGTTGGTTCTCATGTATAAATGAAAGTTTTCTGTACAATCTACTATTGTGGGAGATTGAAATAATTCTATGTTGTCCAATTTGAATCAACCTGATGCTTTAAGTTTGTGTTTCGACTGATATATATCAATTATATGGAATTGATTTTGTACAGTTCCTTGACCTGTGATTCTTAATCCTAGATTTCAAGCTAGTGATGGAACTATTTGGCATCATGGCTTCTCATGATGGTGGAGGATAAAGGCGGAGAATGGGCCAATGCAGCTCCAATTGCATTTCCAACCCACTTGAATTCTGAGGGTATGCAATCCTTTCCACGTTCTAAACTTTCTTTTTTCACCATTCATTTTGTCAACTGCCTTATATTTCATTCTTGGATCTAGACATTTCTCGAGTAATTGAGAAATTATCTGTACTATTTTTGCTGCAAAACGTAGACATGAA

mRNA sequence

GTCCACGTTACGCTTTCCGCCAACTGGGTTCGTTGGCTTTGTTCATTTTCCCGCACGCGACATTTCCGCCATTTTCCCCCTCAGCTTTCTCGTCGGAGTGGCCCCTCCAGATTACCGTCCATGGCGTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACTTCCTGCAGCGCCGGTCCTGTGGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGCCCTCCAGACAGTCCTTATGCAGGAGGGGTTTTTTTAATTACTATTCACTTCCCTCCCGATTATCCATTTAAGCCTCCTAAGGTGTTGCTTTCTATTTGCTCCCTTTTGACCGATGCGAACCCAGATGATCCACTAGTGCCAGAAATTGCTCATCTGTACAAGACCGATAGGGCCAAGTATGAGACAACTGCAAGGAGCTGGACTCAGAAATATGCTATGGGCTAGTATGTATTACGGGAAGGGCATGAGGGATGTTGCTGTTGGTTCTCATGTATAAATGAAAGTTTTCTGTACAATCTACTATTGTGGGAGATTGAAATAATTCTATGTTGTCCAATTTGAATCAACCTGATGCTTTAAGTTTGTGTTTCGACTGATATATATCAATTATATGGAATTGATTTTGTACAGTTCCTTGACCTGTGATTCTTAATCCTAGATTTCAAGCTAGTGATGGAACTATTTGGCATCATGGCTTCTCATGATGGTGGAGGATAAAGGCGGAGAATGGGCCAATGCAGCTCCAATTGCATTTCCAACCCACTTGAATTCTGAGGGTATGCAATCCTTTCCACGTTCTAAACTTTCTTTTTTCACCATTCATTTTGTCAACTGCCTTATATTTCATTCTTGGATCTAGACATTTCTCGAGTAATTGAGAAATTATCTGTACTATTTTTGCTGCAAAACGTAGACATGAA

Coding sequence (CDS)

ATGGCGTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACTTCCTGCAGCGCCGGTCCTGTGGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGCCCTCCAGACAGTCCTTATGCAGGAGGGGTTTTTTTAATTACTATTCACTTCCCTCCCGATTATCCATTTAAGCCTCCTAAGGTGTTGCTTTCTATTTGCTCCCTTTTGACCGATGCGAACCCAGATGATCCACTAGTGCCAGAAATTGCTCATCTGTACAAGACCGATAGGGCCAAGTATGAGACAACTGCAAGGAGCTGGACTCAGAAATATGCTATGGGCTAG

Protein sequence

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDYPFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG*
Homology
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BLAST of MELO3C006058T2 vs. Swiss-Prot
Match: UBC5A_ORYSJ (Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica GN=UBC5A PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 5.9e-47
Identity = 97/147 (65.99%), Postives = 100/147 (68.03%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRI KELKDLQKDPPTSCSAGPV EDMFHWQATIMGP DSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLL-------------SIC-SLLTD---------------------ANPDDPLV 113
           PFKPPKV               SIC  +L D                      NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of MELO3C006058T2 vs. Swiss-Prot
Match: UBC5B_ORYSJ (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica GN=UBC5B PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-46
Identity = 95/148 (64.19%), Postives = 99/148 (66.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDD-----------------------------------PLV 114
           PFKPPKV L       + N +                                    PLV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of MELO3C006058T2 vs. Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.8e-46
Identity = 97/148 (65.54%), Postives = 99/148 (66.89%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFL++IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVLL-------------SICSLLTDANPDD----------------------PLV 114
           PFKPPKV               SIC  +                             PLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of MELO3C006058T2 vs. Swiss-Prot
Match: UBC28_ARATH (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.5e-46
Identity = 94/148 (63.51%), Postives = 98/148 (66.22%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDD-----------------------------------PLV 114
           PFKPPKV         + N +                                    PLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of MELO3C006058T2 vs. Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=1 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 5.5e-45
Identity = 93/148 (62.84%), Postives = 102/148 (68.92%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP+SPYAGGVFL++IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKV----------LLSICSLLTDANPDD-------------------------PLV 114
           PFKPPKV          + S  S+  D   +                          PLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of MELO3C006058T2 vs. TrEMBL
Match: A0A103XJJ4_CYNCS (Ubiquitin-conjugating enzyme, E2 OS=Cynara cardunculus var. scolymus GN=Ccrd_006147 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 2.7e-59
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 114 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 173

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDR KYETTARSWTQKYAMG
Sbjct: 174 PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 226

[Close]
BLAST of MELO3C006058T2 vs. TrEMBL
Match: A0A103XJJ4_CYNCS (Ubiquitin-conjugating enzyme, E2 OS=Cynara cardunculus var. scolymus GN=Ccrd_006147 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-58
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPY+GGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAM 113
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDR+KYETTARSWTQKYAM
Sbjct: 61  PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 112


HSP 2 Score: 232.6 bits (592), Expect = 2.3e-58
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDRAKYE+TARSWTQKYAMG
Sbjct: 61  PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 113

[Close]
BLAST of MELO3C006058T2 vs. TrEMBL
Match: A0A0E0NCN8_ORYRU (Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-58
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDRAKYE+TARSWTQKYAMG
Sbjct: 61  PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 113

[Close]
BLAST of MELO3C006058T2 vs. TrEMBL
Match: A0A0D9YQ50_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-58
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDRAKYE+TARSWTQKYAMG
Sbjct: 61  PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 113

[Close]
BLAST of MELO3C006058T2 vs. TrEMBL
Match: A0A0E0N469_ORYRU (Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 6.7e-58
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGP  EDMFHWQATIMGPPDSPYAGGVFL+ IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDR KYETTARSWTQKYAMG
Sbjct: 61  PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYETTARSWTQKYAMG 113

[Close]
BLAST of MELO3C006058T2 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 181.4 bits (459), Expect = 3.1e-46
Identity = 93/148 (62.84%), Postives = 102/148 (68.92%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP+SPYAGGVFL++IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKV----------LLSICSLLTDANPDD-------------------------PLV 114
           PFKPPKV          + S  S+  D   +                          PLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of MELO3C006058T2 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 180.3 bits (456), Expect = 6.9e-46
Identity = 94/148 (63.51%), Postives = 98/148 (66.22%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLL-------------SICSLLTDANPDD----------------------PLV 114
           PFKPPKV               SIC  +                             PLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of MELO3C006058T2 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-45
Identity = 93/148 (62.84%), Postives = 98/148 (66.22%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFL+TIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVLL-------------SICSLLTDANPDD----------------------PLV 114
           PFKPPKV               SIC  +                             PLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

[Close]
BLAST of MELO3C006058T2 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8)

HSP 1 Score: 174.1 bits (440), Expect = 4.9e-44
Identity = 93/149 (62.42%), Postives = 97/149 (65.10%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCS-AGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPD 60
           MASKRILKELKDLQKDPPTSC  AGPVAEDMFHWQATIMGP +SPY+GGVFL+TIHFPPD
Sbjct: 1   MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60

Query: 61  YPFKPPKVLL-------------SICSLLTDANPDD----------------------PL 114
           YPFKPPKV               SIC  +                             PL
Sbjct: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120

[Close]
BLAST of MELO3C006058T2 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30)

HSP 1 Score: 166.4 bits (420), Expect = 1.0e-41
Identity = 86/148 (58.11%), Postives = 93/148 (62.84%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP DSP+AGGVFL+TIHFPPDY
Sbjct: 1   MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLL-------------SICSLLTDANPDD----------------------PLV 114
           PFKPPKV               SIC  +                             PLV
Sbjct: 61  PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of MELO3C006058T2 vs. NCBI nr
Match: gi|976904095|gb|KVH91838.1| (Ubiquitin-conjugating enzyme, E2 [Cynara cardunculus var. scolymus])

HSP 1 Score: 235.7 bits (600), Expect = 3.9e-59
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 114 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 173

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDR KYETTARSWTQKYAMG
Sbjct: 174 PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 226

[Close]
BLAST of MELO3C006058T2 vs. NCBI nr
Match: gi|976904095|gb|KVH91838.1| (Ubiquitin-conjugating enzyme, E2 [Cynara cardunculus var. scolymus])

HSP 1 Score: 233.4 bits (594), Expect = 1.9e-58
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPY+GGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAM 113
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDR+KYETTARSWTQKYAM
Sbjct: 61  PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 112


HSP 2 Score: 229.9 bits (585), Expect = 2.2e-57
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFL++IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDRAKYE TAR WTQKYAMG
Sbjct: 61  PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARGWTQKYAMG 113

[Close]
BLAST of MELO3C006058T2 vs. NCBI nr
Match: gi|223547507|gb|EEF49002.1| (ubiquitin-conjugating enzyme E2, putative [Ricinus communis])

HSP 1 Score: 229.2 bits (583), Expect = 3.7e-57
Identity = 109/119 (91.60%), Postives = 111/119 (93.28%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPP------KVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPP      KVLLSICSLLTD NPDDPLVPEIAH+YKTDR KYETTARSWTQKYAMG
Sbjct: 61  PFKPPKVAFRTKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 119

[Close]
BLAST of MELO3C006058T2 vs. NCBI nr
Match: gi|743811289|ref|XP_011018976.1| (PREDICTED: ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Populus euphratica])

HSP 1 Score: 229.2 bits (583), Expect = 3.7e-57
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGG FL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGGFLVTIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YKTDR+KYE TARSWTQKYAMG
Sbjct: 61  PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYEATARSWTQKYAMG 113

[Close]
BLAST of MELO3C006058T2 vs. NCBI nr
Match: gi|947048591|gb|KRG98119.1| (hypothetical protein GLYMA_18G051400 [Glycine max])

HSP 1 Score: 228.8 bits (582), Expect = 4.8e-57
Identity = 104/113 (92.04%), Postives = 109/113 (96.46%), Query Frame = 1 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRI+KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPY GGVFL++IHFPPDY
Sbjct: 1   MASKRIVKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG 114
           PFKPPKVLLSICSLLTD NPDDPLVPEIAH+YK D+AKYE TARSWTQKYAMG
Sbjct: 61  PFKPPKVLLSICSLLTDPNPDDPLVPEIAHMYKADKAKYEATARSWTQKYAMG 113

The following BLAST results are available for this feature:
BLAST of MELO3C006058T2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBC5A_ORYSJ5.9e-4765.99Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica GN=UBC5A PE=2... [more]
UBC5B_ORYSJ1.7e-4664.19Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica GN=UBC5B PE=2... [more]
UBC4_SOLLC3.8e-4665.54Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1[more]
UBC28_ARATH6.5e-4663.51Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1[more]
UBC11_ARATH5.5e-4562.84Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=1 SV=2[more]
BLAST of MELO3C006058T2 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A103XJJ4_CYNCS2.7e-5996.46Ubiquitin-conjugating enzyme, E2 OS=Cynara cardunculus var. scolymus GN=Ccrd_006... [more]
A0A103XJJ4_CYNCS1.4e-5895.54Ubiquitin-conjugating enzyme, E2 OS=Cynara cardunculus var. scolymus GN=Ccrd_006... [more]
A0A0E0NCN8_ORYRU2.3e-5894.69Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1[more]
A0A0D9YQ50_9ORYZ2.3e-5894.69Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1[more]
A0A0E0N469_ORYRU6.7e-5893.81Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1[more]
BLAST of MELO3C006058T2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G08690.13.1e-4662.84 ubiquitin-conjugating enzyme 11[more]
AT5G53300.16.9e-4663.51 ubiquitin-conjugating enzyme 10[more]
AT4G27960.21.2e-4562.84 ubiquitin conjugating enzyme 9[more]
AT5G41700.44.9e-4462.42 ubiquitin conjugating enzyme 8[more]
AT5G56150.11.0e-4158.11 ubiquitin-conjugating enzyme 30[more]
BLAST of MELO3C006058T2 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|976904095|gb|KVH91838.1|3.9e-5996.46Ubiquitin-conjugating enzyme, E2 [Cynara cardunculus var. scolymus][more]
gi|976904095|gb|KVH91838.1|1.9e-5895.54Ubiquitin-conjugating enzyme, E2 [Cynara cardunculus var. scolymus][more]
gi|223547507|gb|EEF49002.1|3.7e-5791.60ubiquitin-conjugating enzyme E2, putative [Ricinus communis][more]
gi|743811289|ref|XP_011018976.1|3.7e-5793.81PREDICTED: ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Populus euphratic... [more]
gi|947048591|gb|KRG98119.1|4.8e-5792.04hypothetical protein GLYMA_18G051400 [Glycine max][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C006058MELO3C006058gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C006058T2MELO3C006058T2-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006058T2.cds1MELO3C006058T2.cds1CDS
MELO3C006058T2.cds2MELO3C006058T2.cds2CDS
MELO3C006058T2.cds3MELO3C006058T2.cds3CDS


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 5..67
score: 4.3
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 4..113
score: 23
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 1..66
score: 5.1E-34coord: 67..112
score: 5.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 2..112
score: 1.25
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..112
score: 1.2
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..112
score: 2.3