MELO3C005308.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACTTGAATCCATTTCTCTCTCTCTCTTTTTCTTTCTCCCTATTTCTTCCCTCAACATTCATCATCATCGTCGTCATCATCTCATGGGGAATTACATTTCTTGCGCCTTAGCAACGCCCTTGATCAAGAATTCCAAGGCCGTCAGGGTCGTTCTTCCCGGCGGCGAGGTCCGGCAGTTCCGGGACTCGGTGAAGGCGGCGGAGCTCATGCTCGAATCTCCCAGTCACTTTCTCGCAAACGCCCAATCTCTCCACATCGGTCGCCGATTCTCCGCCCTCGCCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTAATGTTTCCGATGAAGAGAGTTAACTCCGTTGTCACAGCGGCGGATTTAGCCACGTTCTTCATGGCAGCCAACTCTGCAGCCAGACGGATTTCCAGTGCTAAGATAAGGGTTTTACATGAGAATCGGAATCTTCAAGAATCGGAAGCGATGCCGAGAATTAGCGATGGAAATGAAGGACCGAGGTTGAGTTTGGAAGGAGTTGAGGGATTTCCGATGCATCGATTATCGGTTTGCCGGTCAAGAAAGCCATTGTTGGAGACTATTAAAGAAGAACAGATTAGGTCAAGATAGGTAGGGAAATTTCAATAGATTGTAATGAAATTCCAACTTCAATTTCTCTGATCTGATTTGATATGATATGATCTCGATATCTATTTTTTTTTTTTTTAAAAAGAAGATGATGAATTCTTCGATGGGGGATTGAAATTTCATATGAGCTGAAGTTATTTAATGGCGAAACGACGCCGTTTTCGCGCTTCTCCTCTATTCCCATTTTTTTTCACCATTAGCCTCAAATTAAAACTAAATTACCAATTTATTGTGATTGT AAAACTTGAATCCATTTCTCTCTCTCTCTTTTTCTTTCTCCCTATTTCTTCCCTCAACATTCATCATCATCGTCGTCATCATCTCATGGGGAATTACATTTCTTGCGCCTTAGCAACGCCCTTGATCAAGAATTCCAAGGCCGTCAGGGTCGTTCTTCCCGGCGGCGAGGTCCGGCAGTTCCGGGACTCGGTGAAGGCGGCGGAGCTCATGCTCGAATCTCCCAGTCACTTTCTCGCAAACGCCCAATCTCTCCACATCGGTCGCCGATTCTCCGCCCTCGCCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTAATGTTTCCGATGAAGAGAGTTAACTCCGTTGTCACAGCGGCGGATTTAGCCACGTTCTTCATGGCAGCCAACTCTGCAGCCAGACGGATTTCCAGTGCTAAGATAAGGGTTTTACATGAGAATCGGAATCTTCAAGAATCGGAAGCGATGCCGAGAATTAGCGATGGAAATGAAGGACCGAGGTTGAGTTTGGAAGGAGTTGAGGGATTTCCGATGCATCGATTATCGGTTTGCCGGTCAAGAAAGCCATTGTTGGAGACTATTAAAGAAGAACAGATTAGGTCAAGATAGGTAGGGAAATTTCAATAGATTGTAATGAAATTCCAACTTCAATTTCTCTGATCTGATTTGATATGATATGATCTCGATATCTATTTTTTTTTTTTTTAAAAAGAAGATGATGAATTCTTCGATGGGGGATTGAAATTTCATATGAGCTGAAGTTATTTAATGGCGAAACGACGCCGTTTTCGCGCTTCTCCTCTATTCCCATTTTTTTTCACCATTAGCCTCAAATTAAAACTAAATTACCAATTTATTGTGATTGT ATGGGGAATTACATTTCTTGCGCCTTAGCAACGCCCTTGATCAAGAATTCCAAGGCCGTCAGGGTCGTTCTTCCCGGCGGCGAGGTCCGGCAGTTCCGGGACTCGGTGAAGGCGGCGGAGCTCATGCTCGAATCTCCCAGTCACTTTCTCGCAAACGCCCAATCTCTCCACATCGGTCGCCGATTCTCCGCCCTCGCCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTAATGTTTCCGATGAAGAGAGTTAACTCCGTTGTCACAGCGGCGGATTTAGCCACGTTCTTCATGGCAGCCAACTCTGCAGCCAGACGGATTTCCAGTGCTAAGATAAGGGTTTTACATGAGAATCGGAATCTTCAAGAATCGGAAGCGATGCCGAGAATTAGCGATGGAAATGAAGGACCGAGGTTGAGTTTGGAAGGAGTTGAGGGATTTCCGATGCATCGATTATCGGTTTGCCGGTCAAGAAAGCCATTGTTGGAGACTATTAAAGAAGAACAGATTAGGTCAAGATAG MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGRRFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLHENRNLQESEAMPRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKEEQIRSR
BLAST of MELO3C005308.2.1 vs. NCBI nr
Match: XP_008467138.1 (PREDICTED: uncharacterized protein LOC103504565 [Cucumis melo]) HSP 1 Score: 335.9 bits (860), Expect = 8.3e-89 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. NCBI nr
Match: XP_004150859.1 (PREDICTED: uncharacterized protein LOC101213469 [Cucumis sativus] >KGN51501.1 hypothetical protein Csa_5G571440 [Cucumis sativus]) HSP 1 Score: 330.9 bits (847), Expect = 2.7e-87 Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. NCBI nr
Match: XP_022993104.1 (uncharacterized protein LOC111489224 [Cucurbita maxima]) HSP 1 Score: 300.8 bits (769), Expect = 2.9e-78 Identity = 152/172 (88.37%), Postives = 163/172 (94.77%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. NCBI nr
Match: XP_023521532.1 (uncharacterized protein LOC111785350 [Cucurbita pepo subsp. pepo] >XP_023522109.1 uncharacterized protein LOC111785985 [Cucurbita pepo subsp. pepo] >XP_023550633.1 uncharacterized protein LOC111808715 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 300.8 bits (769), Expect = 2.9e-78 Identity = 155/178 (87.08%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. NCBI nr
Match: XP_022939302.1 (uncharacterized protein LOC111445259 [Cucurbita moschata]) HSP 1 Score: 297.4 bits (760), Expect = 3.3e-77 Identity = 153/178 (85.96%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TAIR10
Match: AT5G17350.1 (unknown protein) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28 Identity = 76/182 (41.76%), Postives = 104/182 (57.14%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TAIR10
Match: AT3G03280.1 (unknown protein) HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26 Identity = 69/177 (38.98%), Postives = 102/177 (57.63%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TAIR10
Match: AT5G66580.1 (unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 5.7e-07 Identity = 24/88 (27.27%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TAIR10
Match: AT2G23690.1 (unknown protein) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06 Identity = 23/87 (26.44%), Postives = 47/87 (54.02%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TAIR10
Match: AT4G37240.1 (unknown protein) HSP 1 Score: 48.9 bits (115), Expect = 3.7e-06 Identity = 22/83 (26.51%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TrEMBL
Match: tr|A0A1S3CT06|A0A1S3CT06_CUCME (uncharacterized protein LOC103504565 OS=Cucumis melo OX=3656 GN=LOC103504565 PE=4 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 5.5e-89 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TrEMBL
Match: tr|A0A0A0KUY1|A0A0A0KUY1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571440 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.8e-87 Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TrEMBL
Match: tr|A0A061E798|A0A061E798_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_010809 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.8e-61 Identity = 129/179 (72.07%), Postives = 149/179 (83.24%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TrEMBL
Match: tr|A0A1U8PKF9|A0A1U8PKF9_GOSHI (uncharacterized protein LOC107959994 OS=Gossypium hirsutum OX=3635 GN=LOC107959994 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 5.0e-58 Identity = 123/174 (70.69%), Postives = 142/174 (81.61%), Query Frame = 0
BLAST of MELO3C005308.2.1 vs. TrEMBL
Match: tr|A0A2P5WST6|A0A2P5WST6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA26519 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 8.5e-58 Identity = 122/174 (70.11%), Postives = 142/174 (81.61%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
|