MELO3C005123T3 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C005123T3
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionE3 ubiquitin-protein ligase
Locationchr9 : 16237277 .. 16240198 (-)
Sequence length1571
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATCCCATCCTTTGTCACTGTCTCTCTCAACGGCGTCATTTTGAAATTTTCCCTGTCGTTGAGCTGCAATAACCCTTCACTTTTTGGCGTTCGTATTTCCTCCATGCGGTTGTTGAGTTTCTCCTTTCATTCTCACCAAAACCTTACTCTTTTTCAAGCTTTCCCTGCTTTTCAATCACTGTTTCCTCGCGATTTTAGGTATAATTCGATCTCTTTTTCTTTTCCCTTCAATTTCAATTCTTGCTGTTCATCATAATCTTGACCCATGTCTCCGATTTTGTTAATTTTCTTTTCTGATGCAAGATTTGATAGAATTTGAAGTTTGTGGAAATGTTCTAGGCTGTTTAAATCTTAGATCCATGGTGGGTTTCTTTGAATTTCAAGGTGGATTTTCTTTTCTCTTTGTTGTTGTTCTTTTTTGAAAAAATAATTATGCTCAAATTATGCAATTAGTGATGATTTTATCATTGAATCCATGTGCTTATCGCCGTCCTTTGTCTCGTTTCATGACGTGCAAATTTATGGTTTCCATTAATTAAATACTGATTTCAACCTCGGATTCCTTTTTTGGAATTCTCTTCATACTTATTCTGTTTGTTTTGCATGTTATTATTTGTTGTACTCTCTATATGGCAGTTCTGAATTTATTTTTTTAAAGAGAAGATTGATTCTGAGACCACTTGTTGTGTATATGTTCAGGTAGAAGTATAAAACTGGTCTCTTAAGAATGGCATCTGGAAGTCCTTATTTTGATGATTTGCGGAGCAAACCAGAGGTTATTGATCCTCCTCAGAATGAAGATATGATGGATATCAGAGAAACTGTGGACCATCCAATTCAAAATGAACTTAAACCGAACGTTGCTGTTTCCAGCAGTGTTCGTGAGCTTTTGGAATGTCCAGTGTGTTTGAATGCAATGTACCCTCCGATACATCAGGTTTGGTCACGAATTGTTTAGTTCATCTTTATGTGAGGTGGTTAACTATGCAGACTGATGATGCTTACTCAACTTTTGTGTTGATATAGTTGTTGGATTCTATGATTGTGGAGGTTTAGCGTTTAGTGAAAGAAGAATGAGTTGTGTAAAATGCTTCTTTTTGGAATCTTTTATCAATTTCCTGTGCATTTTGGTCTTTCTAAGTTTTGTACATTTCGAAAGGGATTTGTTTAAGCTTAGGGTAATAGCATTTTCTTTAATGGTGTTCCTTTTTGTTTATGCAGTGTTCAAATGGACACACACTGTGCTCTGGTTGCAAGCCTCGGGTGCATAATCGCTGCCCTACGTGTAGGCATGAACTTGGCAATATTAGATGCCTTGCATTGGAGAAGGTGGCGGCATCTCTAGAACTTCCGTGTAAATATCATACCTATGGTTGCATTGGCATATATCCATATTACAGCAAGGTTAAACATGAATCCCAATGTGTTTATAGACCATATAGCTGTCCATATGCTGGTTCCGAATGTTCAGTCGTCGGTGACATACCCTATTTGGTGGCCCACCTGAAAGATGATCATAAGGTAGACATGCATAGTGGAAGCACATTCAACCATCGTTATGTAAAATCAAATCCTCAAGAAGTTGAAAATGCAACATGGATGCTAACGGTAATTTTCCTCACAGACCACACTGCCCCTTATATTCCTTACAGGAATATCTCATTGGCATTTCTTATGCACATTTTGAGCATTAGAACTAAGTTAGAATCATAAATTTTGGGTCTCTTTTGGTAACTATTTTGTTTTTGAAATTAAGCATATAGGCACTACTACCTCTAAATTTCTTCATTTGTTATCTATTTTTTCTGTTGGTTTAAAAAACTAAACCAAAATTTGAAACTAAAAAAAGTAGCTTTTAGAAACTTGTTTTTGTTTTTGGAATTTGGCTAAGAATTTAATTGTTGTACTTAAGAAAGATGCAAATCATGATAAGAGATGTAGAGGAAATGACTTAATTTTAAATAAAAATGATTACCAAATGGTACCTCAGGTGATTTGACATTGCCATGAAACCTTGCATTTCTTTGGATAACCCCTGTTCATGGAAGTGGGATATCCTTTGATGGATGGCTGAGCAATTTAGGATACATCAGAAATTGGGGAAAAGAAATGCTCAATTTAGTCTTGCTATCAGAAAATGTACTCTTGTAGACTTATGCTACTTCCGAAATATTTCCTTCATCAATTAAATCTTTCTTGTAAAAGGAGAATGCTATTTCTGAAATATTTCTTATCCTACATCAGAGATTTTGCCAGTTTAAAAATCTAGGATCGTCATTGTTCTTGTTCTGCAACCTAAGCTTATATTAGCTCTAAATTCTTGATTGTGGATGACTCTGATTTAAAATTTCATATCTCAGGTTTTCAGTTGCTTTGGTCAGTACTTTTGTCTGCATTTCGAAGCTTTCCAGCTTGGGATGGCTCCAGTATACATAGCTTTTTTACGGTTCATGGGCGACGATAATGATGCAAAGAACTACAGCTATAGTCTTGAGGTAGGTGGAAATGGGAGGAAGATGGTATGGCAAGGAGTGCCCAGAAGCATCAGGGACAGCCATCGGAAAGTTCGGGACAGTTTCGATGGGCTCATTATCCAGCGCAACATGGCTCTCTTCTTCTCCGGTGGGGATAGGAAGGAACTAAAGCTTAGGGTGACGGGTAGAATTTGGAAAGAACAGTGATACTGGTAGAAATTGCTGAGTAGGAACTATCTCTTCAAATTCTATCTTCTTTTGGACAGTAGGTTTGGTTACCTTTTTGTAGAGTAGGTGAGGCTTTTTAATCATGTGTTTCTGTTTTTAATTAAGATGCAAACACTCTTTGCTCTTGCATGAAACCATGATTTATAAGAACTCTCCCCCATAATTGTCAATGCAGAACTTACTCCTCATATCTCCTTGTTGACAGTATTAACAGCATA

mRNA sequence

ATAATCCCATCCTTTGTCACTGTCTCTCTCAACGGCGTCATTTTGAAATTTTCCCTGTCGTTGAGCTGCAATAACCCTTCACTTTTTGGCGTTCGTATTTCCTCCATGCGGTTGTTGAGTTTCTCCTTTCATTCTCACCAAAACCTTACTCTTTTTCAAGCTTTCCCTGCTTTTCAATCACTGTTTCCTCGCGATTTTAGGTATAATTCGATCTCTTTTTCTTTTCCCTTCAATTTCAATTCTTGCTGTTCATCATAATCTTGACCCATGTCTCCGATTTTGTTAATTTTCTTTTCTGATGCAAGATTTGATAGAATTTGAAGTTTGTGGAAATGTTCTAGGCTGTTTAAATCTTAGATCCATGGTGGGTTTCTTTGAATTTCAAGGTAGAAGTATAAAACTGGTCTCTTAAGAATGGCATCTGGAAGTCCTTATTTTGATGATTTGCGGAGCAAACCAGAGGTTATTGATCCTCCTCAGAATGAAGATATGATGGATATCAGAGAAACTGTGGACCATCCAATTCAAAATGAACTTAAACCGAACGTTGCTGTTTCCAGCAGTGTTCGTGAGCTTTTGGAATGTCCAGTGTGTTTGAATGCAATGTACCCTCCGATACATCAGTGTTCAAATGGACACACACTGTGCTCTGGTTGCAAGCCTCGGGTGCATAATCGCTGCCCTACGTGTAGGCATGAACTTGGCAATATTAGATGCCTTGCATTGGAGAAGGTGGCGGCATCTCTAGAACTTCCGTGTAAATATCATACCTATGGTTGCATTGGCATATATCCATATTACAGCAAGGTTAAACATGAATCCCAATGTGTTTATAGACCATATAGCTGTCCATATGCTGGTTCCGAATGTTCAGTCGTCGGTGACATACCCTATTTGGTGGCCCACCTGAAAGATGATCATAAGGTAGACATGCATAGTGGAAGCACATTCAACCATCGTTATGTAAAATCAAATCCTCAAGAAGTTGAAAATGCAACATGGATGCTAACGGTTTTCAGTTGCTTTGGTCAGTACTTTTGTCTGCATTTCGAAGCTTTCCAGCTTGGGATGGCTCCAGTATACATAGCTTTTTTACGGTTCATGGGCGACGATAATGATGCAAAGAACTACAGCTATAGTCTTGAGGTAGGTGGAAATGGGAGGAAGATGGTATGGCAAGGAGTGCCCAGAAGCATCAGGGACAGCCATCGGAAAGTTCGGGACAGTTTCGATGGGCTCATTATCCAGCGCAACATGGCTCTCTTCTTCTCCGGTGGGGATAGGAAGGAACTAAAGCTTAGGGTGACGGGTAGAATTTGGAAAGAACAGTGATACTGGTAGAAATTGCTGAGTAGGAACTATCTCTTCAAATTCTATCTTCTTTTGGACAGTAGGTTTGGTTACCTTTTTGTAGAGTAGGTGAGGCTTTTTAATCATGTGTTTCTGTTTTTAATTAAGATGCAAACACTCTTTGCTCTTGCATGAAACCATGATTTATAAGAACTCTCCCCCATAATTGTCAATGCAGAACTTACTCCTCATATCTCCTTGTTGACAGTATTAACAGCATA

Coding sequence (CDS)

ATGGCATCTGGAAGTCCTTATTTTGATGATTTGCGGAGCAAACCAGAGGTTATTGATCCTCCTCAGAATGAAGATATGATGGATATCAGAGAAACTGTGGACCATCCAATTCAAAATGAACTTAAACCGAACGTTGCTGTTTCCAGCAGTGTTCGTGAGCTTTTGGAATGTCCAGTGTGTTTGAATGCAATGTACCCTCCGATACATCAGTGTTCAAATGGACACACACTGTGCTCTGGTTGCAAGCCTCGGGTGCATAATCGCTGCCCTACGTGTAGGCATGAACTTGGCAATATTAGATGCCTTGCATTGGAGAAGGTGGCGGCATCTCTAGAACTTCCGTGTAAATATCATACCTATGGTTGCATTGGCATATATCCATATTACAGCAAGGTTAAACATGAATCCCAATGTGTTTATAGACCATATAGCTGTCCATATGCTGGTTCCGAATGTTCAGTCGTCGGTGACATACCCTATTTGGTGGCCCACCTGAAAGATGATCATAAGGTAGACATGCATAGTGGAAGCACATTCAACCATCGTTATGTAAAATCAAATCCTCAAGAAGTTGAAAATGCAACATGGATGCTAACGGTTTTCAGTTGCTTTGGTCAGTACTTTTGTCTGCATTTCGAAGCTTTCCAGCTTGGGATGGCTCCAGTATACATAGCTTTTTTACGGTTCATGGGCGACGATAATGATGCAAAGAACTACAGCTATAGTCTTGAGGTAGGTGGAAATGGGAGGAAGATGGTATGGCAAGGAGTGCCCAGAAGCATCAGGGACAGCCATCGGAAAGTTCGGGACAGTTTCGATGGGCTCATTATCCAGCGCAACATGGCTCTCTTCTTCTCCGGTGGGGATAGGAAGGAACTAAAGCTTAGGGTGACGGGTAGAATTTGGAAAGAACAGTGA
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C005123MELO3C005123gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C005123T3MELO3C005123T3-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C005123T3.cds3MELO3C005123T3.cds3CDS
MELO3C005123T3.cds2MELO3C005123T3.cds2CDS
MELO3C005123T3.cds1MELO3C005123T3.cds1CDS