MELO3C004318.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACCTCAGTTCTTCAACATTTGACTGATGTATCCATTTCTGAATGTGGTGGATTGAGTAGTTTAGTATCATCATTGGTGTGTTTTACAAACTTGAAAGATCTTCATGTGATTAAATGTCATAGACTAACCCATTTGCTGAATCCTTCGATGGCTACAACGCTTGTGCAACTTGAGTATTTGACAATAGAAGAATGCAAAAGGATGAGTAGTGTAATTGAGGGAGGATCAACCGAAGAAGATGGAAATGATGAAATGGTTGTATTCAACAACCTACAACATTTATACATTTTTAATTGTTCCAACCTAACAAGCTTTTATTGTGGGAGATGCATCGTTAAATTCCCATGTTTGGAAAGAGTATTCATTCAAAATTGTCCTGAAATGAAGGTCTTTTCACTTGGAATTGTAAGCACGCCTCGTTTGAAATATGAAAAGTTTACTTTAATGAATGATTACGATGATAAATGGTGTCATCCGAAATATCCCAAAGATATGTTGGTGGAAGATATGAATGTCATCACCAGAGAATATTGGGAGGATAATGTTGATACCGGAATTCCAAATTTATTTGCCGAACAGGTTTGTATATTTAATTACCTTTTCATATTTGGTAATAATTAATTTTTATTATTTGTGTGTTAGAGTATGAACTTTAATGAATTTATTTAATTAATGCAGAGTTTGGAGGAAAACCGATCTGAAAATTCTTCTTCTTCAAAGAATAATGTTGAGAAAGAATAAGGAATTATATGGATATTGTTGTACACTACTTAATATATCATTTCATCCACAAGGAAAAGGTCAGACTCTTGAAATCCTCCATTCTTTTTTATGAGAGAATATCATCCAATGTCAAATTGAAAAGTCTCGATAGATTTGTTAAATTAATTTTTGATACAAGTCATAAAATGTTAATTAGTATAATAATAATATATCTGATCCCATCAAATTAATTAGAAGTAACGACAAATTTAACTTCTGTAATATCAATTCAATTTGATGTCTGCATAAAATTTGATGTCACAAATTTAACTTCTGTAATATGAATCTTTTTTTTTTTCCTTTGGACATAAAACCAGCAAGTTAAAATAGATATAACAATGAATTTAATTCACATATAATAAATTCATCCAATATAATGTTCTTTCACCTTTTTCTCTCTTTCACAAAACTGTAATAATAATATCTACCACAAAAGGTAAACAATTAATATGATTCTTCAAGAAGGTTGTTTATTTGGTCAAATTTTCATGAAAGTATTAATACAGTGTATGTTTTGCAAAGGAAGCTGCCAAATAACCTACTCAATCCTAGCAGATGCGTTCTTTGCAAGCCGGCTGTCGAAGACTTGAACCATATTTTCACAACCTGTGCCAATTCGCAAATAGCCTCTGGGTCAAACTGCACGACAAAATTGGTGGAAACTTTGATACAAACAGTATCAAAGCCCTCTGTTGGTCTCTTGGCTCGCTGAAACAATCAAACAGAAAGAACATCATTCTCTCGATGTAGGTGTGGATCTTCTTTTGTCCATTTGGGTGGAAAGAAACAATAGGATTTTCATAGACATAGAAAGAAGCTTAGTCACATTTGGGAAGATATCGAAACTTTGATTGGACCATGGTCGAGTAGAAACAAAATGTTCAAAGACTACAATTTTTCCAACATCAATCTTTAAACTTTAGAGCTTTGTTAGATTAATGTTTGTTGTATATGGCTTCCCTGTGGCCAAAGAAATATACATTGTAACAATGGTTTGATGAAATGATAATGAAGTGGTATGGTGTTAAAATCACCTTTATCACTCTGTGTTTCAATTTCAAAAAA TACCTCAGTTCTTCAACATTTGACTGATGTATCCATTTCTGAATGTGGTGGATTGAGTAGTTTAGTATCATCATTGGTGTGTTTTACAAACTTGAAAGATCTTCATGTGATTAAATGTCATAGACTAACCCATTTGCTGAATCCTTCGATGGCTACAACGCTTGTGCAACTTGAGTATTTGACAATAGAAGAATGCAAAAGGATGAGTAGTGTAATTGAGGGAGGATCAACCGAAGAAGATGGAAATGATGAAATGGTTGTATTCAACAACCTACAACATTTATACATTTTTAATTGTTCCAACCTAACAAGCTTTTATTGTGGGAGATGCATCGTTAAATTCCCATGTTTGGAAAGAGTATTCATTCAAAATTGTCCTGAAATGAAGGTCTTTTCACTTGGAATTGTAAGCACGCCTCGTTTGAAATATGAAAAGTTTACTTTAATGAATGATTACGATGATAAATGGTGTCATCCGAAATATCCCAAAGATATGTTGGTGGAAGATATGAATGTCATCACCAGAGAATATTGGGAGGATAATGTTGATACCGGAATTCCAAATTTATTTGCCGAACAGAGTTTGGAGGAAAACCGATCTGAAAATTCTTCTTCTTCAAAGAATAATGTTGAGAAAGAATAAGGAATTATATGGATATTGTTGTACACTACTTAATATATCATTTCATCCACAAGGAAAAGTGTATGTTTTGCAAAGGAAGCTGCCAAATAACCTACTCAATCCTAGCAGATGCGTTCTTTGCAAGCCGGCTGTCGAAGACTTGAACCATATTTTCACAACCTGTGCCAATTCGCAAATAGCCTCTGGGTCAAACTGCACGACAAAATTGGTGGAAACTTTGATACAAACAGTATCAAAGCCCTCTGTTGGTCTCTTGGCTCGCTGAAACAATCAAACAGAAAGAACATCATTCTCTCGATGTAGGTGTGGATCTTCTTTTGTCCATTTGGGTGGAAAGAAACAATAGGATTTTCATAGACATAGAAAGAAGCTTAGTCACATTTGGGAAGATATCGAAACTTTGATTGGACCATGGTCGAGTAGAAACAAAATGTTCAAAGACTACAATTTTTCCAACATCAATCTTTAAACTTTAGAGCTTTGTTAGATTAATGTTTGTTGTATATGGCTTCCCTGTGGCCAAAGAAATATACATTGTAACAATGGTTTGATGAAATGATAATGAAGTGGTATGGTGTTAAAATCACCTTTATCACTCTGTGTTTCAATTTCAAAAAA ACCTCAGTTCTTCAACATTTGACTGATGTATCCATTTCTGAATGTGGTGGATTGAGTAGTTTAGTATCATCATTGGTGTGTTTTACAAACTTGAAAGATCTTCATGTGATTAAATGTCATAGACTAACCCATTTGCTGAATCCTTCGATGGCTACAACGCTTGTGCAACTTGAGTATTTGACAATAGAAGAATGCAAAAGGATGAGTAGTGTAATTGAGGGAGGATCAACCGAAGAAGATGGAAATGATGAAATGGTTGTATTCAACAACCTACAACATTTATACATTTTTAATTGTTCCAACCTAACAAGCTTTTATTGTGGGAGATGCATCGTTAAATTCCCATGTTTGGAAAGAGTATTCATTCAAAATTGTCCTGAAATGAAGGTCTTTTCACTTGGAATTGTAAGCACGCCTCGTTTGAAATATGAAAAGTTTACTTTAATGAATGATTACGATGATAAATGGTGTCATCCGAAATATCCCAAAGATATGTTGGTGGAAGATATGAATGTCATCACCAGAGAATATTGGGAGGATAATGTTGATACCGGAATTCCAAATTTATTTGCCGAACAGAGTTTGGAGGAAAACCGATCTGAAAATTCTTCTTCTTCAAAGAATAATGTTGAGAAAGAATAA TSVLQHLTDVSISECGGLSSLVSSLVCFTNLKDLHVIKCHRLTHLLNPSMATTLVQLEYLTIEECKRMSSVIEGGSTEEDGNDEMVVFNNLQHLYIFNCSNLTSFYCGRCIVKFPCLERVFIQNCPEMKVFSLGIVSTPRLKYEKFTLMNDYDDKWCHPKYPKDMLVEDMNVITREYWEDNVDTGIPNLFAEQSLEENRSENSSSSKNNVEKE
BLAST of MELO3C004318.2.1 vs. NCBI nr
Match: XP_008455319.2 (PREDICTED: probable disease resistance protein At1g61180 [Cucumis melo]) HSP 1 Score: 379.8 bits (974), Expect = 6.1e-102 Identity = 191/213 (89.67%), Postives = 197/213 (92.49%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. NCBI nr
Match: AIU36098.1 (vat protein [Cucumis melo]) HSP 1 Score: 376.3 bits (965), Expect = 6.8e-101 Identity = 188/213 (88.26%), Postives = 196/213 (92.02%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. NCBI nr
Match: XP_008467089.2 (PREDICTED: probable disease resistance protein At1g12280 [Cucumis melo]) HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85 Identity = 160/193 (82.90%), Postives = 172/193 (89.12%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. NCBI nr
Match: AIU36099.1 (vat-like protein [Cucumis melo]) HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81 Identity = 164/215 (76.28%), Postives = 167/215 (77.67%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. NCBI nr
Match: XP_008467048.1 (PREDICTED: uncharacterized protein LOC103504481 [Cucumis melo]) HSP 1 Score: 276.6 bits (706), Expect = 7.3e-71 Identity = 134/146 (91.78%), Postives = 139/146 (95.21%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. TAIR10
Match: AT1G61190.1 (LRR and NB-ARC domains-containing disease resistance protein) HSP 1 Score: 50.1 bits (118), Expect = 2.0e-06 Identity = 35/127 (27.56%), Postives = 61/127 (48.03%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. TAIR10
Match: AT1G61180.2 (LRR and NB-ARC domains-containing disease resistance protein) HSP 1 Score: 48.1 bits (113), Expect = 7.6e-06 Identity = 32/116 (27.59%), Postives = 53/116 (45.69%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. TAIR10
Match: AT1G61310.1 (LRR and NB-ARC domains-containing disease resistance protein) HSP 1 Score: 47.8 bits (112), Expect = 1.0e-05 Identity = 39/149 (26.17%), Postives = 63/149 (42.28%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. TAIR10
Match: AT5G63020.1 (Disease resistance protein (CC-NBS-LRR class) family) HSP 1 Score: 42.7 bits (99), Expect = 3.2e-04 Identity = 30/113 (26.55%), Postives = 49/113 (43.36%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. Swiss-Prot
Match: sp|O22727|DRL16_ARATH (Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana OX=3702 GN=At1g61190 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 3.6e-05 Identity = 35/127 (27.56%), Postives = 61/127 (48.03%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. Swiss-Prot
Match: sp|Q940K0|DRL15_ARATH (Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana OX=3702 GN=At1g61180 PE=2 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 1.4e-04 Identity = 32/116 (27.59%), Postives = 53/116 (45.69%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. Swiss-Prot
Match: sp|O64789|DRL18_ARATH (Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana OX=3702 GN=At1g61310 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.8e-04 Identity = 39/149 (26.17%), Postives = 63/149 (42.28%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. TrEMBL
Match: tr|A0A1S3C0S8|A0A1S3C0S8_CUCME (probable disease resistance protein At1g61180 OS=Cucumis melo OX=3656 GN=LOC103495509 PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 4.0e-102 Identity = 191/213 (89.67%), Postives = 197/213 (92.49%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. TrEMBL
Match: tr|A0A097NYY2|A0A097NYY2_CUCME (Vat protein OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 4.5e-101 Identity = 188/213 (88.26%), Postives = 196/213 (92.02%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. TrEMBL
Match: tr|A0A1S3CU02|A0A1S3CU02_CUCME (probable disease resistance protein At1g12280 OS=Cucumis melo OX=3656 GN=LOC103504526 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 9.1e-86 Identity = 160/193 (82.90%), Postives = 172/193 (89.12%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. TrEMBL
Match: tr|A0A097NYW9|A0A097NYW9_CUCME (Vat-like protein OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 1.8e-81 Identity = 164/215 (76.28%), Postives = 167/215 (77.67%), Query Frame = 0
BLAST of MELO3C004318.2.1 vs. TrEMBL
Match: tr|A0A1S3CSL5|A0A1S3CSL5_CUCME (uncharacterized protein LOC103504481 OS=Cucumis melo OX=3656 GN=LOC103504481 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 4.8e-71 Identity = 134/146 (91.78%), Postives = 139/146 (95.21%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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