MELO3C003992T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003992T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Putative ABC transporter ATP-binding protein exp8
Location	chr5 : 21285057 .. 21286000 (-)
Sequence length	546

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAAAATAGTTTAAACTCGGTCGAGCGCGTTGGGAGGTATATAGATTTAGCTTCGGAAGCACCATCAATTATCGAGAGCAATCGACCGCCCTCGGGATGGCCTTCGTTTGGAGTTATAAAATTTGATAGTGTTGTTTTACGCTATAGACCCGAACTCCCACCCGTCTTGCATGGGATCTCTTTTAGTGTTCTTTCTAAGGAAAAGGTTGGAATAGTTGGACGGACTGGGGCTGGAAAATCAAGCATACTTAATGCTTTATTTCGTATTGTTGAACTAGATACAGGAAGAATATTCATTGATGGTTTGGACATTGCAAAATTTGGATTGTGGGATTTGAGAAAAGTTGTTGGGATTATACCACAGTCACCTGTTCTTTTTTCAGGTAAAGGATGTGATCATATTTAATCATCTTGGTTTCTTAGGTCCCGTTTGGGTAAGCCTGATTGGTTTTTGTAAATTTAGTTTTTTTAACACCTCTTTCACCCTGGTGTTTCTGGCTTAGATACGTTCTTTTTACTGATGTTTTAAAATATTAGCACAAGTATTCAAAATTAAAATAAATAGGTAGTTTTTAAAAGTTTGCTTTTGTTTTTAGAACTTTAGTTAAGAATAATTCAATTATTGTACTTAAGAAAGATAAAGGTCATAGTAAAAAATGAAGAGAAAATAGTCTTAGTTTTTAAAAACCAAAAACATAAGAAAGATAAAGAGTTAACAAATTGGGTTATAGTTACAGCGTATTCTTCCGTTTTTCTCATTGTATTGTTTTGTTTTATGTAGGAAGTGTTAGGTTTAATCTAGATCCATTCCAAGAACACGCTGACTTTGATCTTTGGGAAGTTCTTGAGAGGACACATTTAATGGATGTCATAAGGAGGAATACGTTGGGCTTGGATGCTGAGGTATGTTTCATTTCGATCGACTTTTGTGAGAAATAG

mRNA sequence

ATGGTTGAAAATAGTTTAAACTCGGTCGAGCGCGTTGGGAGGTATATAGATTTAGCTTCGGAAGCACCATCAATTATCGAGAGCAATCGACCGCCCTCGGGATGGCCTTCGTTTGGAGTTATAAAATTTGATAGTGTTGTTTTACGCTATAGACCCGAACTCCCACCCGTCTTGCATGGGATCTCTTTTAGTGTTCTTTCTAAGGAAAAGGTTGGAATAGTTGGACGGACTGGGGCTGGAAAATCAAGCATACTTAATGCTTTATTTCGTATTGTTGAACTAGATACAGGAAGAATATTCATTGATGGTTTGGACATTGCAAAATTTGGATTGTGGGATTTGAGAAAAGTTGTTGGGATTATACCACAGTCACCTGTTCTTTTTTCAGGAAGTGTTAGGTTTAATCTAGATCCATTCCAAGAACACGCTGACTTTGATCTTTGGGAAGTTCTTGAGAGGACACATTTAATGGATGTCATAAGGAGGAATACGTTGGGCTTGGATGCTGAGGTATGTTTCATTTCGATCGACTTTTGTGAGAAATAG

Coding sequence (CDS)

ATGGTTGAAAATAGTTTAAACTCGGTCGAGCGCGTTGGGAGGTATATAGATTTAGCTTCGGAAGCACCATCAATTATCGAGAGCAATCGACCGCCCTCGGGATGGCCTTCGTTTGGAGTTATAAAATTTGATAGTGTTGTTTTACGCTATAGACCCGAACTCCCACCCGTCTTGCATGGGATCTCTTTTAGTGTTCTTTCTAAGGAAAAGGTTGGAATAGTTGGACGGACTGGGGCTGGAAAATCAAGCATACTTAATGCTTTATTTCGTATTGTTGAACTAGATACAGGAAGAATATTCATTGATGGTTTGGACATTGCAAAATTTGGATTGTGGGATTTGAGAAAAGTTGTTGGGATTATACCACAGTCACCTGTTCTTTTTTCAGGAAGTGTTAGGTTTAATCTAGATCCATTCCAAGAACACGCTGACTTTGATCTTTGGGAAGTTCTTGAGAGGACACATTTAATGGATGTCATAAGGAGGAATACGTTGGGCTTGGATGCTGAGGTATGTTTCATTTCGATCGACTTTTGTGAGAAATAG

Protein sequence

MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHGISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGIIPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEVCFISIDFCEK*

Homology

[Close]

BLAST of MELO3C003992T1 vs. Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.1e-70
Identity = 130/171 (76.02%), Postives = 143/171 (83.63%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLNSVERVG YI++ SEAP +IE+NRPP GWPS G IKF+ VVLRYRPELPPVLHG
Sbjct: 1197 LAENSLNSVERVGNYIEIPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHG 1256

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            +SF +   +KVGIVGRTGAGKSS+LNALFRIVEL+ GRI ID  DI +FGL DLRKV+GI
Sbjct: 1257 VSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGRFGLMDLRKVLGI 1316

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQ+PVLFSG+VRFNLDPF EH D DLWE LER HL D IRRN LGLDAEV
Sbjct: 1317 IPQAPVLFSGTVRFNLDPFSEHNDADLWESLERAHLKDTIRRNPLGLDAEV 1367

[Close]

BLAST of MELO3C003992T1 vs. Swiss-Prot
Match: AB2C_ARATH (ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 262.7 bits (670), Expect = 3.0e-69
Identity = 127/171 (74.27%), Postives = 142/171 (83.04%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLN+VERVG YI++  EAP +IE+NRPP GWPS G IKF+ VVLRYRP+LPPVLHG
Sbjct: 1202 LAENSLNAVERVGNYIEIPPEAPPVIENNRPPPGWPSSGSIKFEDVVLRYRPQLPPVLHG 1261

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            +SF +   +KVGIVGRTGAGKSS+LNALFRIVE++ GRI ID  D+ KFGL DLRKV+GI
Sbjct: 1262 VSFFIHPTDKVGIVGRTGAGKSSLLNALFRIVEVEKGRILIDDCDVGKFGLMDLRKVLGI 1321

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSG+VRFNLDPF EH D DLWE LER HL D IRRN LGLDAEV
Sbjct: 1322 IPQSPVLFSGTVRFNLDPFGEHNDADLWESLERAHLKDTIRRNPLGLDAEV 1372

[Close]

BLAST of MELO3C003992T1 vs. Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66
Identity = 126/169 (74.56%), Postives = 139/169 (82.25%), Query Frame = 1


Query: 3    ENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHGIS 62
            ENSLNSVERVG YIDL SEA +IIE+NRP SGWPS G I+F+ V LRYRP LPPVLHG+S
Sbjct: 1197 ENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIQFEDVHLRYRPGLPPVLHGLS 1256

Query: 63   FSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGIIP 122
            F V   EKVG+VGRTGAGKSS+LNAL+RIVEL+ GRI ID  D+AKFGL DLR+V+ IIP
Sbjct: 1257 FFVYPSEKVGVVGRTGAGKSSMLNALYRIVELEKGRILIDDYDVAKFGLTDLRRVLSIIP 1316

Query: 123  QSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            QSPVLFSG+VRFN+DPF EH D DLWE LER H+ DVI RN  GLDAEV
Sbjct: 1317 QSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEV 1365

[Close]

BLAST of MELO3C003992T1 vs. Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.0e-65
Identity = 123/170 (72.35%), Postives = 136/170 (80.00%), Query Frame = 1


Query: 3    ENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHGIS 62
            ENSLNSVERVG YIDL SEA  IIE+NRP  GWPS G IKF+ V LRYRP LPPVLHG++
Sbjct: 1197 ENSLNSVERVGNYIDLPSEATDIIENNRPVCGWPSGGSIKFEDVHLRYRPGLPPVLHGLT 1256

Query: 63   FSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGIIP 122
            F V   EKVG+VGRTGAGKSS+LNALFRIVE++ GRI ID  D+AKFGL D+R+V+ IIP
Sbjct: 1257 FFVSPSEKVGVVGRTGAGKSSMLNALFRIVEVEKGRIMIDDCDVAKFGLTDVRRVLSIIP 1316

Query: 123  QSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEVC 173
            QSPVLFSG+VRFN+DPF EH D  LWE L R H+ DVI RN  GLDAEVC
Sbjct: 1317 QSPVLFSGTVRFNIDPFSEHNDAGLWEALHRAHIKDVISRNPFGLDAEVC 1366

[Close]

BLAST of MELO3C003992T1 vs. Swiss-Prot
Match: ABCCC_DICDI (ABC transporter C family member 12 OS=Dictyostelium discoideum GN=abcC12 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.0e-45
Identity = 94/169 (55.62%), Postives = 118/169 (69.82%), Query Frame = 1


Query: 3    ENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHGIS 62
            E  +NSVER+ +YI  A EAP II+  RP   WP  G IKFD++V+RYR  L PVL GI+
Sbjct: 1009 ETKMNSVERISQYIRGAVEAPQIIDDCRPSPDWPINGSIKFDNLVMRYREGLDPVLKGIT 1068

Query: 63   FSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGIIP 122
              + +KEK+GIVGRTGAGKSSI+ ALFR++E   G I IDG +IAKFGL DLR+ + IIP
Sbjct: 1069 CEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGSISIDGENIAKFGLKDLRRNLAIIP 1128

Query: 123  QSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            Q PVLFSG++R NLDPF E  D +LW +L+   L  V +    GL+++V
Sbjct: 1129 QDPVLFSGTLRENLDPFNECPDHELWSILDDIQLSKVFKSTEEGLNSKV 1177

HSP 2 Score: 29.3 bits (64), Expect = 5.6e+01
Identity = 15/46 (32.61%), Postives = 22/46 (47.83%), Query Frame = 1


Query: 58  LHGISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDG 104
           L  I+F    +    +VG  G+GKS+++ A+   +E   G I I G
Sbjct: 447 LKNINFEAKGQSLTMVVGSVGSGKSTLVQAMLGELETIDGEIGIKG 492

[Close]

BLAST of MELO3C003992T1 vs. TrEMBL
Match: A0A072V4U7_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 7.7e-72
Identity = 137/171 (80.12%), Postives = 149/171 (87.13%), Query Frame = 1


Query: 1   MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
           + ENSLNSVERVG YIDL SEAPS+I+ NRPP GWPS G IKFD VVLRYRPELPPVLHG
Sbjct: 742 LAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPPVLHG 801

Query: 61  ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
           +SF++   +KVGIVGRTGAGKSS+LNALFRIVEL+ GRI ID  DIAKFGL DLRKV+GI
Sbjct: 802 LSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRKVLGI 861

Query: 121 IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
           IPQSPVLFSG+VRFNLDPF EH D DLWE LER HL DVIRRN+LGLDAEV
Sbjct: 862 IPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEV 912

[Close]

BLAST of MELO3C003992T1 vs. TrEMBL
Match: A0A072VEV1_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 7.7e-72
Identity = 137/171 (80.12%), Postives = 149/171 (87.13%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLNSVERVG YIDL SEAPS+I+ NRPP GWPS G IKFD VVLRYRPELPPVLHG
Sbjct: 960  LAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPPVLHG 1019

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            +SF++   +KVGIVGRTGAGKSS+LNALFRIVEL+ GRI ID  DIAKFGL DLRKV+GI
Sbjct: 1020 LSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRKVLGI 1079

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSG+VRFNLDPF EH D DLWE LER HL DVIRRN+LGLDAEV
Sbjct: 1080 IPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEV 1130

[Close]

BLAST of MELO3C003992T1 vs. TrEMBL
Match: A0A072V4E0_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 7.7e-72
Identity = 137/171 (80.12%), Postives = 149/171 (87.13%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLNSVERVG YIDL SEAPS+I+ NRPP GWPS G IKFD VVLRYRPELPPVLHG
Sbjct: 1197 LAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPPVLHG 1256

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            +SF++   +KVGIVGRTGAGKSS+LNALFRIVEL+ GRI ID  DIAKFGL DLRKV+GI
Sbjct: 1257 LSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRKVLGI 1316

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSG+VRFNLDPF EH D DLWE LER HL DVIRRN+LGLDAEV
Sbjct: 1317 IPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEV 1367

[Close]

BLAST of MELO3C003992T1 vs. TrEMBL
Match: A0A072V5R7_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 7.7e-72
Identity = 137/171 (80.12%), Postives = 149/171 (87.13%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLNSVERVG YIDL SEAPS+I+ NRPP GWPS G IKFD VVLRYRPELPPVLHG
Sbjct: 1014 LAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPPVLHG 1073

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            +SF++   +KVGIVGRTGAGKSS+LNALFRIVEL+ GRI ID  DIAKFGL DLRKV+GI
Sbjct: 1074 LSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRKVLGI 1133

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSG+VRFNLDPF EH D DLWE LER HL DVIRRN+LGLDAEV
Sbjct: 1134 IPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEV 1184

[Close]

BLAST of MELO3C003992T1 vs. TrEMBL
Match: G7IP56_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 7.7e-72
Identity = 137/171 (80.12%), Postives = 149/171 (87.13%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLNSVERVG YIDL SEAPS+I+ NRPP GWPS G IKFD VVLRYRPELPPVLHG
Sbjct: 1197 LAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPPVLHG 1256

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            +SF++   +KVGIVGRTGAGKSS+LNALFRIVEL+ GRI ID  DIAKFGL DLRKV+GI
Sbjct: 1257 LSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRKVLGI 1316

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSG+VRFNLDPF EH D DLWE LER HL DVIRRN+LGLDAEV
Sbjct: 1317 IPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEV 1367

[Close]

BLAST of MELO3C003992T1 vs. TAIR10
Match: AT1G30400.1 (AT1G30400.1 multidrug resistance-associated protein 1)

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-71
Identity = 130/171 (76.02%), Postives = 143/171 (83.63%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLNSVERVG YI++ SEAP +IE+NRPP GWPS G IKF+ VVLRYRPELPPVLHG
Sbjct: 1197 LAENSLNSVERVGNYIEIPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHG 1256

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            +SF +   +KVGIVGRTGAGKSS+LNALFRIVEL+ GRI ID  DI +FGL DLRKV+GI
Sbjct: 1257 VSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGRFGLMDLRKVLGI 1316

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQ+PVLFSG+VRFNLDPF EH D DLWE LER HL D IRRN LGLDAEV
Sbjct: 1317 IPQAPVLFSGTVRFNLDPFSEHNDADLWESLERAHLKDTIRRNPLGLDAEV 1367

[Close]

BLAST of MELO3C003992T1 vs. TAIR10
Match: AT2G34660.1 (AT2G34660.1 multidrug resistance-associated protein 2)

HSP 1 Score: 262.7 bits (670), Expect = 1.7e-70
Identity = 127/171 (74.27%), Postives = 142/171 (83.04%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLN+VERVG YI++  EAP +IE+NRPP GWPS G IKF+ VVLRYRP+LPPVLHG
Sbjct: 1202 LAENSLNAVERVGNYIEIPPEAPPVIENNRPPPGWPSSGSIKFEDVVLRYRPQLPPVLHG 1261

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            +SF +   +KVGIVGRTGAGKSS+LNALFRIVE++ GRI ID  D+ KFGL DLRKV+GI
Sbjct: 1262 VSFFIHPTDKVGIVGRTGAGKSSLLNALFRIVEVEKGRILIDDCDVGKFGLMDLRKVLGI 1321

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSG+VRFNLDPF EH D DLWE LER HL D IRRN LGLDAEV
Sbjct: 1322 IPQSPVLFSGTVRFNLDPFGEHNDADLWESLERAHLKDTIRRNPLGLDAEV 1372

[Close]

BLAST of MELO3C003992T1 vs. TAIR10
Match: AT1G30420.1 (AT1G30420.1 multidrug resistance-associated protein 12)

HSP 1 Score: 254.2 bits (648), Expect = 6.0e-68
Identity = 126/169 (74.56%), Postives = 139/169 (82.25%), Query Frame = 1


Query: 3    ENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHGIS 62
            ENSLNSVERVG YIDL SEA +IIE+NRP SGWPS G I+F+ V LRYRP LPPVLHG+S
Sbjct: 1197 ENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIQFEDVHLRYRPGLPPVLHGLS 1256

Query: 63   FSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGIIP 122
            F V   EKVG+VGRTGAGKSS+LNAL+RIVEL+ GRI ID  D+AKFGL DLR+V+ IIP
Sbjct: 1257 FFVYPSEKVGVVGRTGAGKSSMLNALYRIVELEKGRILIDDYDVAKFGLTDLRRVLSIIP 1316

Query: 123  QSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            QSPVLFSG+VRFN+DPF EH D DLWE LER H+ DVI RN  GLDAEV
Sbjct: 1317 QSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEV 1365

[Close]

BLAST of MELO3C003992T1 vs. TAIR10
Match: AT1G30410.1 (AT1G30410.1 multidrug resistance-associated protein 13)

HSP 1 Score: 250.0 bits (637), Expect = 1.1e-66
Identity = 123/170 (72.35%), Postives = 136/170 (80.00%), Query Frame = 1


Query: 3    ENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHGIS 62
            ENSLNSVERVG YIDL SEA  IIE+NRP  GWPS G IKF+ V LRYRP LPPVLHG++
Sbjct: 1170 ENSLNSVERVGNYIDLPSEATDIIENNRPVCGWPSGGSIKFEDVHLRYRPGLPPVLHGLT 1229

Query: 63   FSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGIIP 122
            F V   EKVG+VGRTGAGKSS+LNALFRIVE++ GRI ID  D+AKFGL D+R+V+ IIP
Sbjct: 1230 FFVSPSEKVGVVGRTGAGKSSMLNALFRIVEVEKGRIMIDDCDVAKFGLTDVRRVLSIIP 1289

Query: 123  QSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEVC 173
            QSPVLFSG+VRFN+DPF EH D  LWE L R H+ DVI RN  GLDAEVC
Sbjct: 1290 QSPVLFSGTVRFNIDPFSEHNDAGLWEALHRAHIKDVISRNPFGLDAEVC 1339

[Close]

BLAST of MELO3C003992T1 vs. TAIR10
Match: AT1G04120.1 (AT1G04120.1 multidrug resistance-associated protein 5)

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-45
Identity = 85/170 (50.00%), Postives = 117/170 (68.82%), Query Frame = 1


Query: 2    VENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHGI 61
            +EN + S+ER+ +Y  +  EAP+IIE  RPPS WP+ G I+   V +RY   LP VLHG+
Sbjct: 1229 LENKIISIERIYQYSQIVGEAPAIIEDFRPPSSWPATGTIELVDVKVRYAENLPTVLHGV 1288

Query: 62   SFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGII 121
            S      +K+GIVGRTG+GKS+++ ALFR++E   G+I ID +DI++ GL DLR  +GII
Sbjct: 1289 SCVFPGGKKIGIVGRTGSGKSTLIQALFRLIEPTAGKITIDNIDISQIGLHDLRSRLGII 1348

Query: 122  PQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            PQ P LF G++R NLDP +EH+D  +WE L+++ L DV+R   L LD+ V
Sbjct: 1349 PQDPTLFEGTIRANLDPLEEHSDDKIWEALDKSQLGDVVRGKDLKLDSPV 1398

HSP 2 Score: 33.1 bits (74), Expect = 2.2e-01
Identity = 28/116 (24.14%), Postives = 46/116 (39.66%), Query Frame = 1


Query: 56  PVLHGISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLR 115
           P L GI   V    +V + G  G+GKSS ++ +   +   +G + I G            
Sbjct: 638 PTLSGIQMKVEKGMRVAVCGTVGSGKSSFISCILGEIPKISGEVRICG------------ 697

Query: 116 KVVGIIPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
              G + QS  + SG++  N+              +E+T   +VI+  +L  D E+
Sbjct: 698 -TTGYVSQSAWIQSGNIEENI---------LFGSPMEKTKYKNVIQACSLKKDIEL 731

[Close]

BLAST of MELO3C003992T1 vs. NCBI nr
Match: gi|659071520|ref|XP_008460280.1| (PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like, partial [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 1.4e-90
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG
Sbjct: 846  MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 905

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI
Sbjct: 906  ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 965

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV
Sbjct: 966  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 1016

[Close]

BLAST of MELO3C003992T1 vs. NCBI nr
Match: gi|659089773|ref|XP_008445683.1| (PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 4.5e-73
Identity = 136/171 (79.53%), Postives = 152/171 (88.89%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLNSVERVG YIDL SEAPSIIESNRPPSGWPS G+I+F+ VVLRYRPELPPVLHG
Sbjct: 1201 VAENSLNSVERVGTYIDLPSEAPSIIESNRPPSGWPSSGLIRFEDVVLRYRPELPPVLHG 1260

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            +SF++   EKVGIVGRTGAGKSS+LNALFRIVEL+ G+IFIDG D+AKFGL+DLR ++GI
Sbjct: 1261 LSFTIFPNEKVGIVGRTGAGKSSMLNALFRIVELERGKIFIDGFDVAKFGLFDLRNILGI 1320

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSG+VRFNLDPF  H D DLWE LER HL DVIRRN+ GLDAEV
Sbjct: 1321 IPQSPVLFSGTVRFNLDPFNNHNDADLWEALERVHLKDVIRRNSFGLDAEV 1371

[Close]

BLAST of MELO3C003992T1 vs. NCBI nr
Match: gi|695052916|ref|XP_009414532.1| (PREDICTED: ABC transporter C family member 2-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 282.3 bits (721), Expect = 5.8e-73
Identity = 135/171 (78.95%), Postives = 151/171 (88.30%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLN+VERVG YI+L SEAP +IESNRPP GWPS G+IKF  VVLRYRPELPPVLHG
Sbjct: 1204 LAENSLNAVERVGTYIELPSEAPPVIESNRPPPGWPSAGIIKFQDVVLRYRPELPPVLHG 1263

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            ISF++   EK+GIVGRTGAGKSS+LNALFRIVEL+ G+IFID  DI+KFGLWDLRKV+GI
Sbjct: 1264 ISFTIEGSEKIGIVGRTGAGKSSMLNALFRIVELERGKIFIDDYDISKFGLWDLRKVLGI 1323

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSG+VRFNLDPF EH D DLWE LER HL DVIRRNT+GLDA+V
Sbjct: 1324 IPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNTMGLDAQV 1374

[Close]

BLAST of MELO3C003992T1 vs. NCBI nr
Match: gi|695041327|ref|XP_009408267.1| (PREDICTED: ABC transporter C family member 2-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 279.6 bits (714), Expect = 3.8e-72
Identity = 134/171 (78.36%), Postives = 151/171 (88.30%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLN+VERVG YI+L SEAP++IE+NRPP  WPS G IKF  VVLRYRPELPPVLHG
Sbjct: 1204 LAENSLNAVERVGTYIELPSEAPAVIENNRPPPAWPSSGTIKFQDVVLRYRPELPPVLHG 1263

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            ISF++ + EKVGIVGRTGAGKSS+LNALFRIVE++ GRIFID  D++KFGLWDLRKV+GI
Sbjct: 1264 ISFTIEASEKVGIVGRTGAGKSSMLNALFRIVEMERGRIFIDDCDVSKFGLWDLRKVLGI 1323

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQSPVLFSG+VRFNLDPF EH D DLWE LER HL DVIRRN+LGLDAEV
Sbjct: 1324 IPQSPVLFSGTVRFNLDPFSEHNDADLWEALERAHLKDVIRRNSLGLDAEV 1374

[Close]

BLAST of MELO3C003992T1 vs. NCBI nr
Match: gi|672184667|ref|XP_008812623.1| (PREDICTED: ABC transporter C family member 2 [Phoenix dactylifera])

HSP 1 Score: 279.3 bits (713), Expect = 4.9e-72
Identity = 134/171 (78.36%), Postives = 150/171 (87.72%), Query Frame = 1


Query: 1    MVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPPVLHG 60
            + ENSLN+VERVG YIDL SEAP+IIE+NRPPSGWPS G IKF  VVLRYRPELPPVLHG
Sbjct: 1204 LAENSLNAVERVGTYIDLPSEAPTIIENNRPPSGWPSSGAIKFQDVVLRYRPELPPVLHG 1263

Query: 61   ISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRKVVGI 120
            ISF++ + EKVGIVGRTGAGKSS+LNALFR+VEL+ G+IFID  D++KFGLWDLR  +GI
Sbjct: 1264 ISFTIEASEKVGIVGRTGAGKSSMLNALFRMVELERGKIFIDDYDVSKFGLWDLRNALGI 1323

Query: 121  IPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEV 172
            IPQ PVLFSG+VRFNLDPF EH+D DLWE LER HL DVIRRN LGLDAEV
Sbjct: 1324 IPQVPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDVIRRNALGLDAEV 1374

The following BLAST results are available for this feature:

BLAST of MELO3C003992T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AB1C_ARATH	2.1e-70	76.02	ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1	[more]
AB2C_ARATH	3.0e-69	74.27	ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2	[more]
AB11C_ARATH	1.1e-66	74.56	ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2	[more]
AB12C_ARATH	2.0e-65	72.35	ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1	[more]
ABCCC_DICDI	3.0e-45	55.62	ABC transporter C family member 12 OS=Dictyostelium discoideum GN=abcC12 PE=3 SV...	[more]

BLAST of MELO3C003992T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A072V4U7_MEDTR	7.7e-72	80.12	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]
A0A072VEV1_MEDTR	7.7e-72	80.12	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]
A0A072V4E0_MEDTR	7.7e-72	80.12	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]
A0A072V5R7_MEDTR	7.7e-72	80.12	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]
G7IP56_MEDTR	7.7e-72	80.12	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]

BLAST of MELO3C003992T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30400.1	1.2e-71	76.02	multidrug resistance-associated protein 1	[more]
AT2G34660.1	1.7e-70	74.27	multidrug resistance-associated protein 2	[more]
AT1G30420.1	6.0e-68	74.56	multidrug resistance-associated protein 12	[more]
AT1G30410.1	1.1e-66	72.35	multidrug resistance-associated protein 13	[more]
AT1G04120.1	1.4e-45	50.00	multidrug resistance-associated protein 5	[more]

BLAST of MELO3C003992T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071520\|ref\|XP_008460280.1\|	1.4e-90	100.00	PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like, partial ...	[more]
gi\|659089773\|ref\|XP_008445683.1\|	4.5e-73	79.53	PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like [Cucumis ...	[more]
gi\|695052916\|ref\|XP_009414532.1\|	5.8e-73	78.95	PREDICTED: ABC transporter C family member 2-like [Musa acuminata subsp. malacce...	[more]
gi\|695041327\|ref\|XP_009408267.1\|	3.8e-72	78.36	PREDICTED: ABC transporter C family member 2-like [Musa acuminata subsp. malacce...	[more]
gi\|672184667\|ref\|XP_008812623.1\|	4.9e-72	78.36	PREDICTED: ABC transporter C family member 2 [Phoenix dactylifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003439	ABC_transporter-like
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0016887	ATPase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C003992	MELO3C003992	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C003992T1	MELO3C003992T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C003992T1.cds2	MELO3C003992T1.cds2	CDS
MELO3C003992T1.cds1	MELO3C003992T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like	PFAM	PF00005	ABC_tran	coord: 58..158 score: 1.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 40..169 score: 2.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 33..171 score: 1.82
None	No IPR available	PANTHER	PTHR24223	FAMILY NOT NAMED	coord: 3..172 score: 1.2E
None	No IPR available	PANTHER	PTHR24223:SF251	ABC TRANSPORTER C FAMILY MEMBER 11-RELATED	coord: 3..172 score: 1.2E