MELO3C003946T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003946T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ribosomal RNA processing protein 1 B, putative
Location	chr5 : 20000460 .. 20002978 (+)
Sequence length	2519

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACGGTTCTGAGTTAAGCCCCCTCCCCCAAAGCTCATTTAGGGTTCTCTCTCAACGCGAACAGGGGAGACCAAAAATCTCCTACCGCCGCCGTTCCGCCTTCTGGGAATTGGGAAATTCCGATTTCATCAAATTCATTCGTTTTCCCTCGTACCCATATCGTATTTCAATCATATTTACCCCTTTTGTTTTGATTTCTTCTCCTCTCCCTTTCTAACTCTGATAGCGGACGATCGAGTTTTTTTGGTGAAAGAAAATGGAGGAGGTGGTTGAAGGAGATCAAAATTTCACTTCGTTAGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGTGACAAGACCCTTCGTGTAATCATCAAGACATGGCTTCCAACTCAAACGAGCCTTTCCGATGGCGATATGAAAAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCCGACAAGGTTCCTGTTCAATCTGAGCTTATTAATCGTCTTGCTTCTCTGCTCCTCCATCTCGACCTATCGTTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACTATGCGTCGTGAATGGGCCGGGATTGATGCGCTCAGGTTAGATAAGTTTTATCTTTTGATTCGTAGGTTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTTGTTTGGTTCAAGTTTTGGAGGAAAGGGTGTTTTTCACTGATGATAAGTTTCATGGGAATGGTGTAAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTGTTGATGTCCTGTTCAAGCCATTCCTTCTTTCAATGGCTAAACTACCAGATAAAGTGTTGTTCGGAAAAATTAAGTCCAATCTTTTTGATGTGATACTGAAAATGGGGAAGCAATTACTCGAGAGTCGAAAACGTGGAGATGATATTGATTCTGGTGATGATACGGCTGTGTATGGGACAATTTCATTGACAAATCAATTCTCAACAACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAACAGAAAGGTATTGTTTGCCATGCACGAAGAGTTTCAGAAGTTGGAGAAAGATTTTTTCTCATCAGGGATTGAGATTTCGTTTCCAGATCTTCAAGAGCAAGATGGGGATGAAGTGCCTACTTTGGTTCCTATTTTGAGTGAAGAAGAGGCTCCTTCGGAAATTTCCATGGTTGATGTTGATGTGGATGCCGAATCCACTGATAAGGCACTTAAGAAGCAAAAAAGGAGTAAAAAGGCCACTGATGGAAGTGGAAAGAAGAAGGCTAAGAAGGCTAAGAAGGCAAAGAAGACCACAAACGGTATTTCTGATCTTGTTTCTGAAAATTCTCCTGCGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACCTTTGATGAAACTGTTATATCAAACCTTCAGATGCAATTTGAGAAGGTTGCTGCTGAAGCTGATTTTGGAGACAGTATTGTGAGTCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGAACTGCAGAAACATGATGTAGCACTTCCTAGTGAAGCCCAGGCTGAAGGAAATACAGCTGCAAAAAGCGAAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCAATGAAAAATAACTTGGTATGGAAACCCCATAATCCTTTACCACCTGAAAGTTTGAGGCTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCGCCAGGTCCTATCTTGGAATTCCCTGCCACAACAAAAAGGACAAAAAGGAGGGCGGTCTCAATGAGGACTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAATTGAAATCTAAGAGTACTTAGATGCTTTTTGTCTTAGGGTATGAAGTTGCAGAGGTCCAAAGCTTACAGATTTTAATCATTTAATGATTGTCTTAATTGCTTCATTTCATTTGGGCGTTGTTCTCACATTGACTTTCATGATCTCAACAATTTAAAGAGAATGATGATTCTGATGCATCGAGTTGATGATACTTGAAATTGATGCCCTCATGGAATTCTAGTTTAAATGATCAAATTTTCTCTTTGCATTTCATTTTGGTTTTTCCTTCATGGTCCTTTTTCTTTTCTTTTTCCTTAGAGTTCTTGTGGTACAAGGCGGTGGGAGAAGACGGTTTTGCAGCATAAATGAGTGAGAGCTAGTGTAGAATTTTGGCAGTGTAATGGTTGCCGTTTGTACTTTTTCCTTTTGTTTAGTACTTGGTGCCTTTGTAGTTTAGTAGAAAAGGTTCTGTCTTTGGTAGAAACTACTTGAATGCACCAAATAGTGTTATAGCTTTATAAGTTGACTATTGAAATCTGATAAGAAGAGCTGGAAATGATTAAAGTTCCTAAATGCCTAATTATTTCAAGCTGTCTTTTGCAC

mRNA sequence

GAACGGTTCTGAGTTAAGCCCCCTCCCCCAAAGCTCATTTAGGGTTCTCTCTCAACGCGAACAGGGGAGACCAAAAATCTCCTACCGCCGCCGTTCCGCCTTCTGGGAATTGGGAAATTCCGATTTCATCAAATTCATTCGTTTTCCCTCGTACCCATATCGTATTTCAATCATATTTACCCCTTTTGTTTTGATTTCTTCTCCTCTCCCTTTCTAACTCTGATAGCGGACGATCGAGTTTTTTTGGTGAAAGAAAATGGAGGAGGTGGTTGAAGGAGATCAAAATTTCACTTCGTTAGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGTGACAAGACCCTTCGTGTAATCATCAAGACATGGCTTCCAACTCAAACGAGCCTTTCCGATGGCGATATGAAAAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCCGACAAGGTTCCTGTTCAATCTGAGCTTATTAATCGTCTTGCTTCTCTGCTCCTCCATCTCGACCTATCGTTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACTATGCGTCGTGAATGGGCCGGGATTGATGCGCTCAGGTTAGATAAGTTTTATCTTTTGATTCGTAGGTTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTTGTTTGGTTCAAGTTTTGGAGGAAAGGGTGTTTTTCACTGATGATAAGTTTCATGGGAATGGTGTAAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTGTTGATGTCCTGTTCAAGCCATTCCTTCTTTCAATGGCTAAACTACCAGATAAAGTGTTGTTCGGAAAAATTAAGTCCAATCTTTTTGATGTGATACTGAAAATGGGGAAGCAATTACTCGAGAGTCGAAAACGTGGAGATGATATTGATTCTGGTGATGATACGGCTGTGTATGGGACAATTTCATTGACAAATCAATTCTCAACAACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAACAGAAAGGTATTGTTTGCCATGCACGAAGAGTTTCAGAAGTTGGAGAAAGATTTTTTCTCATCAGGGATTGAGATTTCGTTTCCAGATCTTCAAGAGCAAGATGGGGATGAAGTGCCTACTTTGGTTCCTATTTTGAGTGAAGAAGAGGCTCCTTCGGAAATTTCCATGGTTGATGTTGATGTGGATGCCGAATCCACTGATAAGGCACTTAAGAAGCAAAAAAGGAGTAAAAAGGCCACTGATGGAAGTGGAAAGAAGAAGGCTAAGAAGGCTAAGAAGGCAAAGAAGACCACAAACGGTATTTCTGATCTTGTTTCTGAAAATTCTCCTGCGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACCTTTGATGAAACTGTTATATCAAACCTTCAGATGCAATTTGAGAAGGTTGCTGCTGAAGCTGATTTTGGAGACAGTATTGTGAGTCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGAACTGCAGAAACATGATGTAGCACTTCCTAGTGAAGCCCAGGCTGAAGGAAATACAGCTGCAAAAAGCGAAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCAATGAAAAATAACTTGGTATGGAAACCCCATAATCCTTTACCACCTGAAAGTTTGAGGCTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCGCCAGGTCCTATCTTGGAATTCCCTGCCACAACAAAAAGGACAAAAAGGAGGGCGGTCTCAATGAGGACTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAATTGAAATCTAAGAGTACTTAGATGCTTTTTGTCTTAGGGTATGAAGTTGCAGAGGTCCAAAGCTTACAGATTTTAATCATTTAATGATTGTCTTAATTGCTTCATTTCATTTGGGCGTTGTTCTCACATTGACTTTCATGATCTCAACAATTTAAAGAGAATGATGATTCTGATGCATCGAGTTGATGATACTTGAAATTGATGCCCTCATGGAATTCTAGTTTAAATGATCAAATTTTCTCTTTGCATTTCATTTTGGTTTTTCCTTCATGGTCCTTTTTCTTTTCTTTTTCCTTAGAGTTCTTGTGGTACAAGGCGGTGGGAGAAGACGGTTTTGCAGCATAAATGAGTGAGAGCTAGTGTAGAATTTTGGCAGTGTAATGGTTGCCGTTTGTACTTTTTCCTTTTGTTTAGTACTTGGTGCCTTTGTAGTTTAGTAGAAAAGGTTCTGTCTTTGGTAGAAACTACTTGAATGCACCAAATAGTGTTATAGCTTTATAAGTTGACTATTGAAATCTGATAAGAAGAGCTGGAAATGATTAAAGTTCCTAAATGCCTAATTATTTCAAGCTGTCTTTTGCAC

Coding sequence (CDS)

ATGGAGGAGGTGGTTGAAGGAGATCAAAATTTCACTTCGTTAGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGTGACAAGACCCTTCGTGTAATCATCAAGACATGGCTTCCAACTCAAACGAGCCTTTCCGATGGCGATATGAAAAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCCGACAAGGTTCCTGTTCAATCTGAGCTTATTAATCGTCTTGCTTCTCTGCTCCTCCATCTCGACCTATCGTTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACTATGCGTCGTGAATGGGCCGGGATTGATGCGCTCAGGTTAGATAAGTTTTATCTTTTGATTCGTAGGTTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTTGTTTGGTTCAAGTTTTGGAGGAAAGGGTGTTTTTCACTGATGATAAGTTTCATGGGAATGGTGTAAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTGTTGATGTCCTGTTCAAGCCATTCCTTCTTTCAATGGCTAAACTACCAGATAAAGTGTTGTTCGGAAAAATTAAGTCCAATCTTTTTGATGTGATACTGAAAATGGGGAAGCAATTACTCGAGAGTCGAAAACGTGGAGATGATATTGATTCTGGTGATGATACGGCTGTGTATGGGACAATTTCATTGACAAATCAATTCTCAACAACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAACAGAAAGGTATTGTTTGCCATGCACGAAGAGTTTCAGAAGTTGGAGAAAGATTTTTTCTCATCAGGGATTGAGATTTCGTTTCCAGATCTTCAAGAGCAAGATGGGGATGAAGTGCCTACTTTGGTTCCTATTTTGAGTGAAGAAGAGGCTCCTTCGGAAATTTCCATGGTTGATGTTGATGTGGATGCCGAATCCACTGATAAGGCACTTAAGAAGCAAAAAAGGAGTAAAAAGGCCACTGATGGAAGTGGAAAGAAGAAGGCTAAGAAGGCTAAGAAGGCAAAGAAGACCACAAACGGTATTTCTGATCTTGTTTCTGAAAATTCTCCTGCGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACCTTTGATGAAACTGTTATATCAAACCTTCAGATGCAATTTGAGAAGGTTGCTGCTGAAGCTGATTTTGGAGACAGTATTGTGAGTCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGAACTGCAGAAACATGATGTAGCACTTCCTAGTGAAGCCCAGGCTGAAGGAAATACAGCTGCAAAAAGCGAAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCAATGAAAAATAACTTGGTATGGAAACCCCATAATCCTTTACCACCTGAAAGTTTGAGGCTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCGCCAGGTCCTATCTTGGAATTCCCTGCCACAACAAAAAGGACAAAAAGGAGGGCGGTCTCAATGAGGACTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAATTGAAATCTAAGAGTACTTAG

Protein sequence

MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFEKVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMRTKKGVRSLPVKRLKKLKSKST*

Homology

[Close]

BLAST of MELO3C003946T1 vs. Swiss-Prot
Match: RRP1B_MOUSE (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus GN=Rrp1b PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 7.5e-26
Identity = 80/228 (35.09%), Postives = 119/228 (52.19%), Query Frame = 1


Query: 18  LASSNKATRDKTLRVIIKTWLPTQT-----SLSDGDMKKLWKGLFYCVWHADKVPVQSEL 77
           LASS K  RD+ +R + + +L  +T     S S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGVRDRAVRKL-RQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLSLAVQYFSV--FLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLK 137
            N + S L+H+  SL  QY  +  F  TM REW GID L+LDK+Y+LIR  L Q F +LK
Sbjct: 76  AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135

Query: 138 KHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPF--LPLQKEVVDVL 197
           +++W+       + +L + +   + +   NGV   +  V+LEEL       L  +    L
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTVGGAELLADQNLKL 195

Query: 198 FKPFLLSMAKLPDKVLFGKIKSNLFDVILKMG----KQLLESRKRGDD 233
             PF    AK  D  L   +   +F+VI+       ++ +E RK  +D
Sbjct: 196 IDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKED 240

[Close]

BLAST of MELO3C003946T1 vs. Swiss-Prot
Match: RRP1_CAEEL (Ribosomal RNA processing protein 1 homolog OS=Caenorhabditis elegans GN=C47E12.7 PE=3 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 3.1e-24
Identity = 90/356 (25.28%), Postives = 159/356 (44.66%), Query Frame = 1


Query: 18  LASSNKATRDKTLRVIIKTWLPTQTS---LSDGDMKKLWKGLFYCVWHADKVPVQSELIN 77
           LA    ATR + LRV+   W+  Q++     D D+ +L KGL Y +W  DK+ +Q EL +
Sbjct: 16  LACGEPATRQRALRVL-HDWIRDQSAKKHFDDADLMRLCKGLHYVMWMQDKMILQEELAD 75

Query: 78  RLASLL-LHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHS 137
           R+  L+ +       V++ + FL ++ +EW  ID  R+DKF + +RR +   F  L +  
Sbjct: 76  RIGGLINIFTSEEEKVRFVACFLKSLSKEWPHIDRWRMDKFLMEVRRMVRACFTHLAELK 135

Query: 138 WDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFL 197
           W  ++     +V +E    TD  F+   + +  AS+ L+EL     L K+ V    KP++
Sbjct: 136 WKKDIRDEYWKVFQETTISTDKSFN-EALKFHFASILLDELDAAGGLTKKQVTACLKPYI 195

Query: 198 -LSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVYGTISLTNQFS 257
            L   K   + LF  +   +F  IL+    L+ + + G+++D G     Y       +  
Sbjct: 196 ELLGNKDISEYLFTSLYEEIFKTILQQKSDLITAVEEGEEMDQGGIEFSY------KEIG 255

Query: 258 TTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQDGDEVPTLVPI 317
              +E+G         RK ++ + ++F K  +                QD     T VP 
Sbjct: 256 ALLFEVGKQEHLNAKRRKKIYDLVKKFDKSSRG---------------QDPLHFETPVP- 315

Query: 318 LSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKAKKTTNG 369
              +E  +     + +  A     + K++++S +      KK+A++A +A +  NG
Sbjct: 316 ---KERLTRHDYEEAEKKAIVLANSFKQERKSSRKVKSQIKKRAREAAEAARQENG 344

[Close]

BLAST of MELO3C003946T1 vs. Swiss-Prot
Match: RRP1B_HUMAN (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3)

HSP 1 Score: 113.2 bits (282), Expect = 9.1e-24
Identity = 77/229 (33.62%), Postives = 113/229 (49.34%), Query Frame = 1


Query: 18  LASSNKATRDKTLR-----VIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSEL 77
           LASS K  RD+ ++     + +KT   T    S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGIRDRAVKKLRQYISVKTQRETG-GFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLSLAVQYF-SVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKK 137
            N +A L+  ++ S A   F   F  TM REW GID LRLDK+Y+LIR  L Q F +LK+
Sbjct: 76  ANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKR 135

Query: 138 HSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFK- 197
           + W+    +  + VL + V   + +   NGV +    ++L+EL   +  ++ + D   K 
Sbjct: 136 NGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSK-VGGKELLADQNLKF 195

Query: 198 --PFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGD 238
             PF    AK  D  L   I   +F+ I+     + E          GD
Sbjct: 196 IDPFCKIAAKTKDHTLVQTIARGVFEAIVDQSPFVPEETMEEQKTKVGD 241

[Close]

BLAST of MELO3C003946T1 vs. Swiss-Prot
Match: RRP1_MOUSE (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus GN=Rrp1 PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 2.9e-22
Identity = 75/239 (31.38%), Postives = 113/239 (47.28%), Query Frame = 1


Query: 14  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPV 73
           L + LA + + TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK-PL 72

Query: 74  QSELINRLASLLLHLDLSLAVQ--YFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFF 133
           Q E + R  + L+H   +   Q  +   F  TM REW GID LRLDKFY+L+R  L +  
Sbjct: 73  QQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESL 132

Query: 134 ALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPF--LPLQKEV 193
             +K   WD      L+++L   +   D +   +GV      +FLEEL       L  + 
Sbjct: 133 KAVKARGWDERQIEQLLELLTTEILNPDSQ-APSGVKSHFLEIFLEELAKVGAAELTADQ 192

Query: 194 VDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVYG 244
                 PF    A+  D  +  KI  ++F  I++     +E      D  SG+  A  G
Sbjct: 193 NLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIEDIMNELDTQSGEGEASDG 248

[Close]

BLAST of MELO3C003946T1 vs. Swiss-Prot
Match: RRP1_HUMAN (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens GN=RRP1 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 8.6e-22
Identity = 73/235 (31.06%), Postives = 118/235 (50.21%), Query Frame = 1


Query: 14  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPV 73
           L + LA + + TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK  +
Sbjct: 13  LAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKPLL 72

Query: 74  QSELINRLASLLLHLDLSLAVQ--YFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFF 133
           Q EL  R  S L+H   +   Q  +   F  TM REW GID LRLDKFY+L+R  L++  
Sbjct: 73  QEEL-GRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESL 132

Query: 134 ALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQKEVVD 193
            +LK   W+      L+++L   +     +   NGV      +FLEEL   +  ++   D
Sbjct: 133 KVLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEELTK-VGAEELTAD 192

Query: 194 VLFK---PFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDD 239
              K   PF    A+  D ++   I   +F+ I++     +E     +++D+ D+
Sbjct: 193 QNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIEDLL--NELDTQDE 241

[Close]

BLAST of MELO3C003946T1 vs. TrEMBL
Match: A0A0A0LGX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G062650 PE=4 SV=1)

HSP 1 Score: 1063.9 bits (2750), Expect = 6.7e-308
Identity = 540/566 (95.41%), Postives = 548/566 (96.82%), Query Frame = 1


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR LVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240
           QKEVVDVLFKPFLLSM KLPDKVL GKIKSNLFDVILK GKQLLESRKRGDD+DS DDT 
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGT+SLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPI S EEAPSEIS+VDVDV  ESTDKALKKQK+SKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSEN+PANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480
           +VAAEADFG S VSPVISTNGSVKKRKRAKNV ELQKHD  LPSEA AEGNTAAKSEEKS
Sbjct: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 567
           AVSMRTK GVRSLPVKRLKKLKSKST
Sbjct: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of MELO3C003946T1 vs. TrEMBL
Match: A0A061FFL5_THECC (Ribosomal RNA processing protein 1 B, putative OS=Theobroma cacao GN=TCM_034656 PE=4 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 2.5e-169
Identity = 319/562 (56.76%), Postives = 406/562 (72.24%), Query Frame = 1


Query: 13  SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSEL 72
           +L+K LA+ +K+TRD+ +R ++ TWLP+Q  +SD +MK+LWKGLFYCVWHADK+P QS+L
Sbjct: 11  TLIKQLAACDKSTRDRAVRSLLHTWLPSQAEVSDEEMKRLWKGLFYCVWHADKLPAQSDL 70

Query: 73  INRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKH 132
           I +L+S+L  L+  L++QYFSVFLLTMRREW GID LRLDKFYLLIRRFL+ FF +LKK 
Sbjct: 71  IEKLSSVLPKLETGLSLQYFSVFLLTMRREWTGIDKLRLDKFYLLIRRFLNCFFVMLKKW 130

Query: 133 SWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPF 192
           SWDL+  R  ++VL +  F  DDKF GNGVNY IAS+FLEE+RPFLP++KEVV+VL +PF
Sbjct: 131 SWDLDFTRRSIRVLVDGTFLADDKFQGNGVNYHIASIFLEEIRPFLPVKKEVVEVLLEPF 190

Query: 193 LLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVYGTISLTNQFS 252
           +  M K+ DKVL GKI+SN+FDV +KMG++ LE ++ GD++D G+D  V GTISL   FS
Sbjct: 191 VGIMGKVGDKVLVGKIRSNVFDVFVKMGRRFLELKRSGDEVDEGEDLVVLGTISLLMGFS 250

Query: 253 TTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE-QDGDEVPTLVP 312
             FYELGSS DCCQGNRKV+  +HEEF KLEKD    GI++S P+  E  + DEVP L+P
Sbjct: 251 AKFYELGSSADCCQGNRKVVLGLHEEFLKLEKDLTLLGIDVSIPEPNEGGEEDEVPELIP 310

Query: 313 ILSEEEAPSEISMVD-VDVDAE-STDKALKKQKRSKKATDGSGKKKAKKAKKAKKTTNGI 372
           I SE E      + +  +V+A  S  KALKK K++KKAT GSG KK KK K A       
Sbjct: 311 IASEMEVDDSDGVSEPAEVNANGSAKKALKKSKKAKKATRGSG-KKTKKCKNA------- 370

Query: 373 SDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFEKVAAEADFG 432
                E SPA+++N+ +V A   NS+ EQ  DG+ ITF E+VISNLQ+QFEKVAAE    
Sbjct: 371 -----ECSPADQENDVMVPAESANSSIEQNGDGHSITFTESVISNLQLQFEKVAAEVGLD 430

Query: 433 DSIVS--PVISTNGSV-KKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKSVKKVRF 492
             + S   +   NG+  KKRKR K+VD  +  +  L ++   EG   AK+ EKS K+VRF
Sbjct: 431 GDVASACDLPKVNGAASKKRKRVKSVDGQKSQNGELTNQGDGEGGGTAKTGEKSTKRVRF 490

Query: 493 SMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMRT 552
           SMKNNLVWKPH+PLPP+SLRLPPSVTPRGSALKKGIPPGPI E P  TK+ K+     + 
Sbjct: 491 SMKNNLVWKPHSPLPPQSLRLPPSVTPRGSALKKGIPPGPITEVPPLTKKVKKAKSVKKA 550

Query: 553 KKGVRSL--PVKRLKKLKSKST 567
           +K ++S+   VKR KKLKS S+
Sbjct: 551 RKVIKSMYPLVKRTKKLKSVSS 559

[Close]

BLAST of MELO3C003946T1 vs. TrEMBL
Match: A0A067F3M5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008164mg PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 2.7e-168
Identity = 318/579 (54.92%), Postives = 409/579 (70.64%), Query Frame = 1


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           M+E+ E ++  +SL+K LAS NK TR+K L  ++K WLP QT +SD DMKKLWKGLFYCV
Sbjct: 1   MKEMGETEEVGSSLIKQLASCNKGTREKALNALLKNWLPNQTQISDDDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK+  Q++LI  LAS++  LDL LA+ YFS FLLTMRREW GID LRLDKFYLL+RR
Sbjct: 61  WHADKLAFQTQLIEFLASVITSLDLPLAIHYFSTFLLTMRREWTGIDGLRLDKFYLLVRR 120

Query: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180
           FL  +F ++KK+ WD+EL + L+ VL  R + +DDKF GNGVNY I SVF+EE+R FLPL
Sbjct: 121 FLRYYFQIMKKNLWDIELVKKLMGVLVHRSWLSDDKFLGNGVNYHIVSVFVEEIRAFLPL 180

Query: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240
           +KEVV+ +F PF+  MAK+ DKVL GKIKSN+FDV+ KMG++LL+ +K G ++DS D+  
Sbjct: 181 RKEVVEDIFGPFVSVMAKVQDKVLVGKIKSNVFDVLSKMGRRLLDVKKSGGEVDSSDEVV 240

Query: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDL-- 300
           + GTI++   FS  F+ELGSS +CCQGNRKVLF++HEEF KLEKDF SSG+EIS PD+  
Sbjct: 241 LLGTIAIVLGFSGKFFELGSSVECCQGNRKVLFSLHEEFLKLEKDFGSSGVEISIPDVSV 300

Query: 301 -QEQDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAK 360
             E + DEVP LVPI S  +        D   +  ++D+ L K+K+ K A+ G+ K   K
Sbjct: 301 GDEDEDDEVPNLVPISSYMDVDGS---GDDVAEGAASDEVLNKRKKGKNASSGNDKNGKK 360

Query: 361 KAKKAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQM 420
             KK KK  N +SD+ SE S + KD+ENIV A   +S +EQ  D N I F+E+VISNLQM
Sbjct: 361 SKKKKKK--NAVSDVGSETSLSGKDDENIVNATSNDSIDEQNHDTNFIPFNESVISNLQM 420

Query: 421 QFEKVAAEADFGDSIVSP-------VISTNGSV-KKRKRAKNVDELQKHDVALPSEAQAE 480
           QFEKVAAE    D++ +           TNG+V KKRKR KN D  Q  +     E  A+
Sbjct: 421 QFEKVAAEVGMEDNVDTACDLPQDRANGTNGTVSKKRKRVKNKDGKQSKNPESTREGDAD 480

Query: 481 GNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILE 540
               AKS EKS KKVRFSMK+NLVWKP +PLPP+SLRLPPSV PRGSALKKG+PPGP++E
Sbjct: 481 DCLTAKSGEKSAKKVRFSMKSNLVWKPQSPLPPQSLRLPPSVAPRGSALKKGVPPGPVME 540

Query: 541 FPATTKRTKRRAVSMRTKKGV---RSLPVKRLKKLKSKS 566
               +K+ K+RA S++  + V   ++  +K  +KLKS S
Sbjct: 541 MSVASKKVKQRAKSVKKARKVIKIKNPTLKGARKLKSLS 574

[Close]

BLAST of MELO3C003946T1 vs. TrEMBL
Match: V4WI81_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010385mg PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 2.7e-168
Identity = 319/579 (55.09%), Postives = 408/579 (70.47%), Query Frame = 1


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           M+E+ E ++  +SL+K LAS NK TR+K L  ++K WLP QT +SD DMKKLWKGLFYCV
Sbjct: 53  MKEMGETEEVGSSLIKQLASCNKGTREKALNALLKNWLPNQTQISDDDMKKLWKGLFYCV 112

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK+  Q++LI  LAS++  LDL LA+ YFS FLLTMRREW GID LRLDKFYLL+RR
Sbjct: 113 WHADKLAFQTQLIEFLASVITSLDLPLAIHYFSTFLLTMRREWTGIDGLRLDKFYLLVRR 172

Query: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180
           FL  +F ++KK+ WD+EL + L+ VL  R   +DDKF GNGVNY I SVF+EE+R FLPL
Sbjct: 173 FLRYYFQIMKKNLWDIELVKKLMGVLVHRSLLSDDKFLGNGVNYHIVSVFVEEIRAFLPL 232

Query: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240
           +KEVV+ +F PF+  MAK+ DKVL GKIKSN+FDV+ KMG++LL+ +K G ++DS D+  
Sbjct: 233 RKEVVEDIFGPFVSVMAKVQDKVLVGKIKSNVFDVLSKMGRRLLDVKKSGGEVDSSDEVV 292

Query: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDL-- 300
           + GTI++   FS  F+ELGSS +CCQGNRKVLF++HEEF KLEKDF SSG+EIS PD+  
Sbjct: 293 LLGTIAIVLGFSGKFFELGSSVECCQGNRKVLFSLHEEFLKLEKDFGSSGVEISIPDVSV 352

Query: 301 -QEQDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAK 360
             E + DEVP LVPI S  +        D   +  ++D+ L K K+ KKA+ G+ K   K
Sbjct: 353 GDEDEDDEVPNLVPISSYMDVDGS---GDDVAEGAASDEVLNKCKKGKKASSGNDKNGKK 412

Query: 361 KAKKAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQM 420
             KK KK  N +SD+ SE S + KD+ENIV A   +S +EQ  D N I F+E+VISNLQM
Sbjct: 413 SKKKKKK--NAVSDVGSETSLSGKDDENIVNATSNDSIDEQNHDTNFIPFNESVISNLQM 472

Query: 421 QFEKVAAEADFGDSIVSP-------VISTNGSV-KKRKRAKNVDELQKHDVALPSEAQAE 480
           QFEKVAAE    D++ +           TNG+V KKRKR KN D  Q  +     E  A+
Sbjct: 473 QFEKVAAEVGMEDNVDTACDLPQDRANGTNGTVSKKRKRVKNKDGKQSKNPESTREGDAD 532

Query: 481 GNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILE 540
               AKS EKS KKVRFSMK+NLVWKP +PLPP+SLRLPPSV PRGSALKKG+PPGP++E
Sbjct: 533 DCLTAKSGEKSAKKVRFSMKSNLVWKPQSPLPPQSLRLPPSVAPRGSALKKGVPPGPVME 592

Query: 541 FPATTKRTKRRAVSMRTKKGV---RSLPVKRLKKLKSKS 566
               +K+ K+RA S++  + V   ++  +K  +KLKS S
Sbjct: 593 MSVASKKVKQRAKSVKKARKVIKIKNPTLKGARKLKSLS 626

[Close]

BLAST of MELO3C003946T1 vs. TrEMBL
Match: F6GXI5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00510 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 9.1e-164
Identity = 317/559 (56.71%), Postives = 404/559 (72.27%), Query Frame = 1


Query: 15  VKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELIN 74
           ++ LAS +K+TRD+ LR ++ TWLP+Q+ +S+ DMKK+WKGLFY +WHADK PVQS+LI+
Sbjct: 6   IRHLASCDKSTRDEALR-LLHTWLPSQSQVSEEDMKKVWKGLFYSLWHADKTPVQSDLID 65

Query: 75  RLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSW 134
           RLASLL  L+L L++ YFSVFLLTMRREW GIDALRLDKFYLLIR+F++ FF +LK +SW
Sbjct: 66  RLASLLTTLNLPLSIHYFSVFLLTMRREWPGIDALRLDKFYLLIRKFMYNFFLVLKNNSW 125

Query: 135 DLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLL 194
           DLE+ + L+ VLE      D +F GNGV Y +ASVFLEELRPFLP+++E+V VLF+PF+ 
Sbjct: 126 DLEISKRLIVVLE----LEDGRFSGNGVGYHVASVFLEELRPFLPVRREIVSVLFEPFVE 185

Query: 195 SMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVYGTISLTNQFSTT 254
            M +  DKVL GK+KSN+FD +++MG++LLE ++ G D     D   +GT+++   FS  
Sbjct: 186 VMGRSADKVLVGKVKSNVFDFLVRMGQRLLEVKRLGGDEGGDGDAVAFGTLAVGFGFSKK 245

Query: 255 FYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQDGDEVPTLVPILS 314
           FYELGS+PDC QGNRKVLF +HE F KLEKDF S+ IEIS P+    D DE+PTL+PI  
Sbjct: 246 FYELGSAPDCLQGNRKVLFGLHEGFAKLEKDFASARIEISIPEDDNCDEDELPTLIPIAQ 305

Query: 315 EEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKAKKTTNGISDLVS 374
            E      S V   V   S  KA KK K+ KK + GS KK   K KK+        DLVS
Sbjct: 306 PEAEVEGASEVVESVGNGSARKASKKSKKLKKVSGGSDKKNKMKKKKS-------PDLVS 365

Query: 375 ENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFEKVAAEADFGDSIV- 434
           ENS   + NEN+ V N ENSN E  SD ++I F+E+VISNLQMQFEKVAAE   G+ ++ 
Sbjct: 366 ENSATVEYNENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGLGNELMG 425

Query: 435 ---SPVISTNGSV-KKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKSVKKVRFSMK 494
              SP    NG+V KKRKRAKN +E   HDV+  S+   E +  AKS+ KS KKV+FS+K
Sbjct: 426 LCDSPTRPVNGTVSKKRKRAKNNNE---HDVS--SQGDDESSALAKSKGKSAKKVKFSIK 485

Query: 495 NNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMRT-KK 554
           NNLVWKP +PLPP+SLRLPPSVTPRGSALKKGIPPGP+ E P  TK+ K+RA S++  + 
Sbjct: 486 NNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGPVREMP-QTKKVKKRAKSLKKGRN 545

Query: 555 GVRSL--PVKRLKKLKSKS 566
           G++S+   +KRLKKL+S S
Sbjct: 546 GIKSISPAIKRLKKLQSLS 546

[Close]

BLAST of MELO3C003946T1 vs. TAIR10
Match: AT5G20600.1 (AT5G20600.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 489.6 bits (1259), Expect = 2.6e-138
Identity = 273/569 (47.98%), Postives = 360/569 (63.27%), Query Frame = 1


Query: 2   EEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVW 61
           E+ +  +++  SL+K LAS  ++ RD++LR +++TWLP QT +SD DMKKLW+G+FYCVW
Sbjct: 11  EQALPIEEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVW 70

Query: 62  HADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRF 121
           HADK   QSELI+RL+S L  L L L++ YF+VFL TMRREW+ ID LRLDKFYLLIRRF
Sbjct: 71  HADKSLYQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRF 130

Query: 122 LHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQ 181
           LH FF+L+  +SWDLE  R L+ +L +     DDKF GNGVNY I S F+EELRPFLPL+
Sbjct: 131 LHGFFSLIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLR 190

Query: 182 KEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDD-IDSGDDTA 241
           KEV+++LF PF+  M  + DK+L GKIKSNLFD +LKMGK+LL  ++ GDD +   DD  
Sbjct: 191 KEVLELLFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVV 250

Query: 242 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 301
           V G+I+L+ +F+  FYELGSSP+C QGNRK++FA+H+EF +LEKD  SS IE+S  +   
Sbjct: 251 VLGSIALSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASR 310

Query: 302 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 361
              DEVP  VP+                  +ES    + K K+       S KK  KK  
Sbjct: 311 PGNDEVPESVPV------------------SESNTNVVSKSKKIVANGSSSKKKGLKKCS 370

Query: 362 KAKKTT---NGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQM 421
           K KK +     + D V +    NKD                       +FDET+IS+L+ 
Sbjct: 371 KTKKDSVKKGAVMDSVVD--LGNKDE----------------------SFDETMISDLRQ 430

Query: 422 QFEKVAAEADFGDSIVSPV------ISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGN 481
           +FEK+A+E     S V+ V      +S +   KKRKR    +E     V+  +   AE +
Sbjct: 431 EFEKIASEMSPSKSEVASVCDVAEPVSVSKKTKKRKRENKGEE----QVSTVNRDAAETS 490

Query: 482 TAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFP 541
            A  S EKS K+VRF+MKNNLVWKPH PLPP+ LR PPS TPRGSALK+GIP GP+ E  
Sbjct: 491 LAGPSSEKSSKRVRFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVREL- 528

Query: 542 ATTKRTKRRAVSMRTKKGVRSLPVKRLKK 561
             +++TK++ V    ++GV+S  +K LKK
Sbjct: 551 -ASRKTKKK-VKPAARRGVKS--IKNLKK 528

[Close]

BLAST of MELO3C003946T1 vs. NCBI nr
Match: gi|659069592|ref|XP_008450828.1| (PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 1114.4 bits (2881), Expect = 0.0e+00
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 1


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240
           QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480
           KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 567
           AVSMRTKKGVRSLPVKRLKKLKSKST
Sbjct: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of MELO3C003946T1 vs. NCBI nr
Match: gi|449465344|ref|XP_004150388.1| (PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 1063.9 bits (2750), Expect = 9.6e-308
Identity = 540/566 (95.41%), Postives = 548/566 (96.82%), Query Frame = 1


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR LVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240
           QKEVVDVLFKPFLLSM KLPDKVL GKIKSNLFDVILK GKQLLESRKRGDD+DS DDT 
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGT+SLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPI S EEAPSEIS+VDVDV  ESTDKALKKQK+SKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSEN+PANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480
           +VAAEADFG S VSPVISTNGSVKKRKRAKNV ELQKHD  LPSEA AEGNTAAKSEEKS
Sbjct: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 567
           AVSMRTK GVRSLPVKRLKKLKSKST
Sbjct: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of MELO3C003946T1 vs. NCBI nr
Match: gi|659069594|ref|XP_008450836.1| (PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis melo])

HSP 1 Score: 772.3 bits (1993), Expect = 5.8e-220
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 1


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240
           QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENSPANKDNENIVVAN 391
           KAKKTTNGISDLVSENSPANKDNENIVVAN
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVAN 390

[Close]

BLAST of MELO3C003946T1 vs. NCBI nr
Match: gi|778667662|ref|XP_011648968.1| (PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis sativus])

HSP 1 Score: 738.0 bits (1904), Expect = 1.2e-209
Identity = 372/390 (95.38%), Postives = 379/390 (97.18%), Query Frame = 1


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR LVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240
           QKEVVDVLFKPFLLSM KLPDKVL GKIKSNLFDVILK GKQLLESRKRGDD+DS DDT 
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGT+SLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPI S EEAPSEIS+VDVDV  ESTDKALKKQK+SKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENSPANKDNENIVVAN 391
           KAKKTTNGISDLVSEN+PANKDNENIVVAN
Sbjct: 361 KAKKTTNGISDLVSENTPANKDNENIVVAN 390

[Close]

BLAST of MELO3C003946T1 vs. NCBI nr
Match: gi|645234478|ref|XP_008223829.1| (PREDICTED: ribosomal RNA processing protein 1 homolog [Prunus mume])

HSP 1 Score: 614.0 bits (1582), Expect = 2.6e-172
Identity = 330/561 (58.82%), Postives = 400/561 (71.30%), Query Frame = 1


Query: 13  SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSEL 72
           SL+K LAS NK+ RD+ LRV++KTWLPTQ +L D  MKKLWKGLFYCVWHADKVPVQ++L
Sbjct: 27  SLIKQLASCNKSGRDRALRVLLKTWLPTQLNLHDDHMKKLWKGLFYCVWHADKVPVQTQL 86

Query: 73  INRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKH 132
           I+RL+SL+L L L L++ YFS FLLTMRREW+GIDALRLDKFYLLIRRF+  FFAL++ +
Sbjct: 87  IDRLSSLVLSLHLPLSIHYFSAFLLTMRREWSGIDALRLDKFYLLIRRFMASFFALMRNN 146

Query: 133 SWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPF 192
            WDLEL + L+ VLEE  FF DDKF GNGVNY IASVFLEELRP+LPL+ EV++V+   F
Sbjct: 147 LWDLELVKRLMGVLEEVTFFADDKFLGNGVNYHIASVFLEELRPYLPLKAEVLEVVLVSF 206

Query: 193 LLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVYGTISLTNQFS 252
           +   AK+PDKVL GKI+SN FD +L  GK+LLE +K G+D+ SGD+  V+G+I+LT  FS
Sbjct: 207 IRVSAKVPDKVLLGKIRSNTFDALLGAGKRLLEVKKLGEDVGSGDEVMVFGSIALTMGFS 266

Query: 253 TTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQDGDEVPTLVPI 312
           + FYELGSSP+CCQGNRKVLF +HEEF KLEK+  SSGIEIS PD+   D + VPTLVP+
Sbjct: 267 SKFYELGSSPECCQGNRKVLFGLHEEFLKLEKELESSGIEISIPDVVYNDDEVVPTLVPL 326

Query: 313 LSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKK--KAKKAKKAKKTTNGIS 372
             EE         +V +   S  K LKK K  +K T  +  K  K KK KK  K  N I 
Sbjct: 327 AGEEMEVGNSEAGEVVMVNGSAGKLLKKCKNREKDTGAADTKAEKKKKKKKKNKKENEIL 386

Query: 373 DLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFEKVAAEADFGD 432
           D  SE S  +++NEN VVANGE+S+N+Q +D N +  D+ VISNLQMQFEK+AAEA    
Sbjct: 387 DSDSEKSSTDRENEN-VVANGESSDNQQATDENAVKLDDNVISNLQMQFEKIAAEAGLDG 446

Query: 433 SIVS----PVISTNGSV-KKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKSVKKVR 492
            + S    P  S  G V KKRKR K              E   EG T AKS EKS KKV+
Sbjct: 447 DVPSACDLPTASDKGPVSKKRKRVKKA-----------VEEDVEGGTNAKSGEKSAKKVK 506

Query: 493 FSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMR 552
           FSMK+NLVWKP +PLPP+ LR+PPS TPRGSALKKG+PPGPI E P  TK+ K   V + 
Sbjct: 507 FSMKSNLVWKPQSPLPPQDLRVPPSATPRGSALKKGVPPGPIREMPLPTKKVK--MVRVV 566

Query: 553 TKKGVRSLPVKRLKKLKSKST 567
           T K  R   +KR+KKLKS+ T
Sbjct: 567 TAKKARK-AIKRIKKLKSRPT 572

The following BLAST results are available for this feature:

BLAST of MELO3C003946T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RRP1B_MOUSE	7.5e-26	35.09	Ribosomal RNA processing protein 1 homolog B OS=Mus musculus GN=Rrp1b PE=1 SV=2	[more]
RRP1_CAEEL	3.1e-24	25.28	Ribosomal RNA processing protein 1 homolog OS=Caenorhabditis elegans GN=C47E12.7...	[more]
RRP1B_HUMAN	9.1e-24	33.62	Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3	[more]
RRP1_MOUSE	2.9e-22	31.38	Ribosomal RNA processing protein 1 homolog A OS=Mus musculus GN=Rrp1 PE=1 SV=2	[more]
RRP1_HUMAN	8.6e-22	31.06	Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens GN=RRP1 PE=1 SV=1	[more]

BLAST of MELO3C003946T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGX3_CUCSA	6.7e-308	95.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G062650 PE=4 SV=1	[more]
A0A061FFL5_THECC	2.5e-169	56.76	Ribosomal RNA processing protein 1 B, putative OS=Theobroma cacao GN=TCM_034656 ...	[more]
A0A067F3M5_CITSI	2.7e-168	54.92	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008164mg PE=4 SV=1	[more]
V4WI81_9ROSI	2.7e-168	55.09	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010385mg PE=4 SV=1	[more]
F6GXI5_VITVI	9.1e-164	56.71	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00510 PE=4 SV=...	[more]

BLAST of MELO3C003946T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20600.1	2.6e-138	47.98	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of MELO3C003946T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659069592\|ref\|XP_008450828.1\|	0.0e+00	100.00	PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis melo]	[more]
gi\|449465344\|ref\|XP_004150388.1\|	9.6e-308	95.41	PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis sativu...	[more]
gi\|659069594\|ref\|XP_008450836.1\|	5.8e-220	100.00	PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis melo...	[more]
gi\|778667662\|ref\|XP_011648968.1\|	1.2e-209	95.38	PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis sati...	[more]
gi\|645234478\|ref\|XP_008223829.1\|	2.6e-172	58.82	PREDICTED: ribosomal RNA processing protein 1 homolog [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR010301	Nop52

Vocabulary: **Cellular Component**
Term	Definition
GO:0030688	preribosome, small subunit precursor

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0030688	preribosome, small subunit precursor
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C003946	MELO3C003946	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C003946T1	MELO3C003946T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C003946T1.cds1	MELO3C003946T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010301	Nucleolar, Nop52	PANTHER	PTHR13026	NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52	coord: 14..565 score: 3.9E
IPR010301	Nucleolar, Nop52	PFAM	PF05997	Nop52	coord: 13..214 score: 1.9
None	No IPR available	PANTHER	PTHR13026:SF0	RIBOSOMAL RNA PROCESSING PROTEIN 1 HOMOLOG	coord: 14..565 score: 3.9E