MELO3C003401T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003401T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	C2H2-like zinc finger protein
Location	chr4 : 921366 .. 922357 (-)
Sequence length	992

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACCTATTTATCTATTCAAATGTCATTTCCACTATAATTGCCCTTTTCTTCCTATTCCATGGCTGCTGAGCTTGTGCTTGGATTCCAATACTCTTCTTCTTTGCCTCATCTTTCCGAAACAACTCGAGACGGGCAGAATCCAAACGGTGTAAACCCTATGCAAACGCCTGATGTTGTTGTTGATGACGATGACTCATGGGAAGTCCGAGCTTTCGCCGAGGACACGGCTAATGTTATGGGAACTACTTGGCCTCCTAGGTCTTACACTTGCACTTATTGTAGAAGAGAGTTTAGGTCAGCTCAAGCCCTAGGCGGTCATATGAACGTTCACCGTCGTGACCGTGCTCGCCTCCACCACCAAGCTCCGTCTTCGTCATCGAATCCCATGAAACCCTCTTCCACTTCTTCCTCTAATTCCAATTCTTTCATCATCCCAACTCCTGATTTTAATGGTGGAGGAAGCTTGTGCCTTCTTTACCAATTCCCAAACCCTAATAGTATTAATGGTGGAATCAATACCTCTCCTTCCACATTAAATGCTTACATTCACTCACCCTCTTCTCTTTTCTCCATGCCACATCATTCCTTCAACACCTACCCGTCCTCAACCTCGTTGTCCGCGGCTTTTCCGATGAACGACAACAACCACCGTCGTCTCGAAACAAGTACTTACTCGGCCTCCATGGAAAATAATAACGGTAGCAGCCAAGACGAAGTACTTGATCTAGAGCTTAGACTTGGACATGGTCCACCTTCTTCAACTCAAAATCTCATGGAAAAGGGAGAGAAGAAGGTCTCTAATTCAGAAGCTGCATGTTTGAAGAAGAGATCATCAGATTGATCATCAACAACTTGTAAGATATATACATTTCATCAAGCTCTTTCTTTTTCTTCTTCAATTTCATTTTTTTCTTCTTTTCTTTTCTTGGAGAGAATTAATTGTCTAATTAATTCATAGTTGGGTTTTCATAAATTAAATAAAAAGAAGAGA

mRNA sequence

ATACCTATTTATCTATTCAAATGTCATTTCCACTATAATTGCCCTTTTCTTCCTATTCCATGGCTGCTGAGCTTGTGCTTGGATTCCAATACTCTTCTTCTTTGCCTCATCTTTCCGAAACAACTCGAGACGGGCAGAATCCAAACGGTGTAAACCCTATGCAAACGCCTGATGTTGTTGTTGATGACGATGACTCATGGGAAGTCCGAGCTTTCGCCGAGGACACGGCTAATGTTATGGGAACTACTTGGCCTCCTAGGTCTTACACTTGCACTTATTGTAGAAGAGAGTTTAGGTCAGCTCAAGCCCTAGGCGGTCATATGAACGTTCACCGTCGTGACCGTGCTCGCCTCCACCACCAAGCTCCGTCTTCGTCATCGAATCCCATGAAACCCTCTTCCACTTCTTCCTCTAATTCCAATTCTTTCATCATCCCAACTCCTGATTTTAATGGTGGAGGAAGCTTGTGCCTTCTTTACCAATTCCCAAACCCTAATAGTATTAATGGTGGAATCAATACCTCTCCTTCCACATTAAATGCTTACATTCACTCACCCTCTTCTCTTTTCTCCATGCCACATCATTCCTTCAACACCTACCCGTCCTCAACCTCGTTGTCCGCGGCTTTTCCGATGAACGACAACAACCACCGTCGTCTCGAAACAAGTACTTACTCGGCCTCCATGGAAAATAATAACGGTAGCAGCCAAGACGAAGTACTTGATCTAGAGCTTAGACTTGGACATGGTCCACCTTCTTCAACTCAAAATCTCATGGAAAAGGGAGAGAAGAAGGTCTCTAATTCAGAAGCTGCATGTTTGAAGAAGAGATCATCAGATTGATCATCAACAACTTGTAAGATATATACATTTCATCAAGCTCTTTCTTTTTCTTCTTCAATTTCATTTTTTTCTTCTTTTCTTTTCTTGGAGAGAATTAATTGTCTAATTAATTCATAGTTGGGTTTTCATAAATTAAATAAAAAGAAGAGA

Coding sequence (CDS)

ATGGCTGCTGAGCTTGTGCTTGGATTCCAATACTCTTCTTCTTTGCCTCATCTTTCCGAAACAACTCGAGACGGGCAGAATCCAAACGGTGTAAACCCTATGCAAACGCCTGATGTTGTTGTTGATGACGATGACTCATGGGAAGTCCGAGCTTTCGCCGAGGACACGGCTAATGTTATGGGAACTACTTGGCCTCCTAGGTCTTACACTTGCACTTATTGTAGAAGAGAGTTTAGGTCAGCTCAAGCCCTAGGCGGTCATATGAACGTTCACCGTCGTGACCGTGCTCGCCTCCACCACCAAGCTCCGTCTTCGTCATCGAATCCCATGAAACCCTCTTCCACTTCTTCCTCTAATTCCAATTCTTTCATCATCCCAACTCCTGATTTTAATGGTGGAGGAAGCTTGTGCCTTCTTTACCAATTCCCAAACCCTAATAGTATTAATGGTGGAATCAATACCTCTCCTTCCACATTAAATGCTTACATTCACTCACCCTCTTCTCTTTTCTCCATGCCACATCATTCCTTCAACACCTACCCGTCCTCAACCTCGTTGTCCGCGGCTTTTCCGATGAACGACAACAACCACCGTCGTCTCGAAACAAGTACTTACTCGGCCTCCATGGAAAATAATAACGGTAGCAGCCAAGACGAAGTACTTGATCTAGAGCTTAGACTTGGACATGGTCCACCTTCTTCAACTCAAAATCTCATGGAAAAGGGAGAGAAGAAGGTCTCTAATTCAGAAGCTGCATGTTTGAAGAAGAGATCATCAGATTGA

Protein sequence

MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSMPHHSFNTYPSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLGHGPPSSTQNLMEKGEKKVSNSEAACLKKRSSD*

Homology

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BLAST of MELO3C003401T1 vs. Swiss-Prot
Match: SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-19
Identity = 65/180 (36.11%), Postives = 88/180 (48.89%), Query Frame = 1


Query: 54  EDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLH-HQAPSSSSNPMKP 113
           +D   ++G +WPPRSYTC++C+REFRSAQALGGHMNVHRRDRARL   Q+PSSSS P  P
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPP 91

Query: 114 SSTSSSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSM 173
               + + ++     P  +   +L      P+      G+  S S  + +          
Sbjct: 92  YPNPNYSYSTMANSPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKH---------T 151

Query: 174 PHHSFNTYPSSTSLSAA----FPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLG 229
           P ++  T  SS  + A     F   D           S  +E    +  ++ LDLELRLG
Sbjct: 152 PENACKTKKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLG 202

[Close]

BLAST of MELO3C003401T1 vs. Swiss-Prot
Match: RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-15
Identity = 70/203 (34.48%), Postives = 88/203 (43.35%), Query Frame = 1


Query: 48  EVRAFA--EDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSS 107
           E RAFA  E+     G  WPPRSY+C++C REF+SAQALGGHMNVHRRDRARL  Q+   
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQS--- 91

Query: 108 SSNPMKPSSTSSSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHS 167
               + PSST  +            + G  + +  +   PN     I  S    N  + S
Sbjct: 92  ----LSPSSTDQATPPECDRQQQVLDVGSKVLVQEETRKPNGTKREI--SDVCNNNVLES 151

Query: 168 PSSLFSMPHHSFNTYPSSTSLSAAFPM--------NDNNHRRLETSTYSASM-------- 227
               +   +    T  S   LS  F          + ++ +R +T      M        
Sbjct: 152 SMKRYEHDNGEVKTDLSVGLLSTEFDPRKKQLINGSSSSWKRAKTDVSRFPMMLGLVIGI 211

Query: 228 ENNNGSSQDEVLDLELRLGHGPP 233
              NG    E LDLELRLG  PP
Sbjct: 212 SEING--HHEELDLELRLGADPP 223

[Close]

BLAST of MELO3C003401T1 vs. Swiss-Prot
Match: TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.6e-07
Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 1


Query: 67  RSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSS 118
           RSY C++C R F +AQALGGHMN+HRRDRA+L  +    + + +   S +S
Sbjct: 33  RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLMEDNKDDVVAESDAS 83

[Close]

BLAST of MELO3C003401T1 vs. Swiss-Prot
Match: KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.8e-06
Identity = 45/163 (27.61%), Postives = 69/163 (42.33%), Query Frame = 1


Query: 67  RSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNSNSFIIP 126
           R + C YC R+F ++QALGGH N H+R+RA         +++P         ++N+F+ P
Sbjct: 36  RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLGVLANSP-----PILDDNNTFLRP 95

Query: 127 TPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSMP-HHSFNTYPSSTS 186
            P F         YQ P   S +G         N  +    ++ +M  +  F+ YP    
Sbjct: 96  YPCF---------YQNPFQGSTSG---------NEPLQEQPTMMTMDGYDPFHPYP---- 155

Query: 187 LSAAFPMNDNNHRRLETSTYSASMENNNG-SSQDEVLDLELRL 228
               F ++ NN+            +  NG   +DE LDL+L L
Sbjct: 156 YVYPFALSGNNN------------DGGNGVMEEDEPLDLDLSL 159

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BLAST of MELO3C003401T1 vs. TrEMBL
Match: A0A0A0LF36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902400 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 4.8e-144
Identity = 252/260 (96.92%), Postives = 257/260 (98.85%), Query Frame = 1


Query: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM 60
           MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM
Sbjct: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM 60

Query: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNS 120
           GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNS
Sbjct: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNS 120

Query: 121 NSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSMPHHSFNTY 180
           NSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTS STLNAYIHSPSSLFSMPHHSFNTY
Sbjct: 121 NSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSSSTLNAYIHSPSSLFSMPHHSFNTY 180

Query: 181 PSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLGHGPPSSTQNLME 240
           PSSTS+S AFPMND+NHRRLETSTYSASMENNNG SQDEVLDLELRLGHGPPSSTQNLME
Sbjct: 181 PSSTSVSQAFPMNDDNHRRLETSTYSASMENNNG-SQDEVLDLELRLGHGPPSSTQNLME 240

Query: 241 KGEKKVSNSEAACLKKRSSD 261
           KGEKK+S+SEAACLK+RSSD
Sbjct: 241 KGEKKISDSEAACLKERSSD 259

[Close]

BLAST of MELO3C003401T1 vs. TrEMBL
Match: B9MU16_POPTR (Palmate-like pentafoliata 1 transcription factor OS=Populus trichocarpa GN=PALM1 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.6e-49
Identity = 126/255 (49.41%), Postives = 159/255 (62.35%), Query Frame = 1


Query: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVV-------DDDDSWEVRAFA 60
           MAAE+  G    + L  L ++ ++    + +NP +TP V +       ++DDSWEVRAFA
Sbjct: 1   MAAEI--GLLSLTQLQKLPQSQQNQYQLHQLNPNETPSVWMWNPKQTQEEDDSWEVRAFA 60

Query: 61  EDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPS 120
           EDT N+ GTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARLH   P  S NP   S
Sbjct: 61  EDTGNINGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQTQP-GSINP--NS 120

Query: 121 STSSSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNA-YIHSPSSLFSM 180
           STSSS+S++FIIPT +F     LCLLYQ PNPN +      +P+T+NA    SPS+L S+
Sbjct: 121 STSSSSSSTFIIPTQEFPPNAGLCLLYQLPNPNGV-----FTPATMNACATDSPSTLLSI 180

Query: 181 -PHHSFNTYPSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQD--------EVLDL 235
            P+   N    S +   A P  + +H     +  SAS++N+N  + D        E LDL
Sbjct: 181 TPYPHNNLIEKSLNFLVAPPEINTSHCYSIKAEPSASIDNSNNINSDNNFKELAHEELDL 240

[Close]

BLAST of MELO3C003401T1 vs. TrEMBL
Match: B9S1F9_RICCO (Palmate-like pentafoliata 1 transcription factor OS=Ricinus communis GN=PALM1 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.3e-48
Identity = 121/242 (50.00%), Postives = 155/242 (64.05%), Query Frame = 1


Query: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNP----MQTPDVVVDDDDSWEVRAFAEDT 60
           MAAEL L       L  L+E+ ++ Q+ + +N     M  P    +D+DSWEVRAF EDT
Sbjct: 1   MAAELGLLSLAQLELQKLAESQQN-QHQHQLNSSSSWMWNPKQTHEDEDSWEVRAFEEDT 60

Query: 61  ANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTS 120
            N+MGTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARL HQ P  S NP   SST+
Sbjct: 61  GNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARL-HQTPPGSINP-NSSSTN 120

Query: 121 SSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSMPHHS 180
           S+++++FIIP  +F+  G LCLLYQ PNPN I     T+     A  HSPS+L S+  + 
Sbjct: 121 STSASTFIIPAREFSTNGGLCLLYQLPNPNGI---FTTTAMNACAIDHSPSTLLSISPYP 180

Query: 181 FNTYPSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQD---EVLDLELRLGHGPPS 236
            N YP       A P+ +++H     +   AS +N++ + +D   E LDLELRLGH   S
Sbjct: 181 HN-YP------VASPVVNSSHFYSSKAQPVASTDNSSNNCKDLGNEELDLELRLGHRSTS 229

[Close]

BLAST of MELO3C003401T1 vs. TrEMBL
Match: A0A061G496_THECC (Palmate-like pentafoliata 1 transcription factor OS=Theobroma cacao GN=TCM_015727 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.9e-48
Identity = 112/216 (51.85%), Postives = 133/216 (61.57%), Query Frame = 1


Query: 32  NPMQTPDVVVDDDDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVH 91
           NP   P    +DDDSWEVRAFAEDT N+MGTTWPPRSYTCT+CRREFRSAQALGGHMNVH
Sbjct: 40  NPKAQPQ---EDDDSWEVRAFAEDTGNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVH 99

Query: 92  RRDRARLHHQAPSSSSNPMKPSSTSSSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSI--- 151
           RRDRARLH   PS + NP   SST+S  S++ +IPT +F   G LCLLYQ PNPN +   
Sbjct: 100 RRDRARLHQTQPSGAINPTSSSSTTS--SSTVLIPTQEFGTNGGLCLLYQLPNPNGVFTS 159

Query: 152 ---NGGINTSPSTLNAYIHSPS-SLFSMPHHSFNTYPSSTSLSAAFPMNDNNHRRLETST 211
              N   N SPSTL +    PS +L   P  +F   P   + S++   +       +TS 
Sbjct: 160 PPMNACSNDSPSTLLSISPYPSNNLMEAPSLNFPVTPQGLNNSSSLCYSSKAEPSTQTSA 219

Query: 212 YSA------SMENNNGSSQDEVLDLELRLGHGPPSS 235
            +       S  NN   +  E LDLELRLGH P +S
Sbjct: 220 DNCINNIGNSSSNNCKETSIEELDLELRLGHRPTTS 250

[Close]

BLAST of MELO3C003401T1 vs. TrEMBL
Match: A0A067JUG6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20102 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.8e-48
Identity = 123/253 (48.62%), Postives = 155/253 (61.26%), Query Frame = 1


Query: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPM--------QTPDVVVDDDDSWEVRAF 60
           MA EL L      SL HL    +  QN +  NP         QTP    +DDDSWEV+AF
Sbjct: 1   MATELAL-----LSLNHLHHRKQPQQNQHQPNPTAWMWNPNKQTP----EDDDSWEVKAF 60

Query: 61  AEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKP 120
            EDT NVMGTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARLH Q     + P+ P
Sbjct: 61  EEDTGNVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHRQTVLQPTPPLPP 120

Query: 121 SSTSSSNSNSFIIPTPDFN-GGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFS 180
            + SSSNS++F+IPT +F+  GG LCLLYQ PNPN +    N S +  +    SPS++ S
Sbjct: 121 GTISSSNSSTFLIPTQEFSTNGGGLCLLYQLPNPNGVFTPTNISKA--SPIDPSPSTVLS 180

Query: 181 MPHHSFNTYPS-STSLSAAFPMNDNNH---RRLETSTYSASMENNNGSSQ--DEVLDLEL 236
           +     + YP    SL+  + + +++H    R E +  +A++  NN   +   E +DLEL
Sbjct: 181 I-----SPYPQIGQSLTNNYQVINSSHYHSGRPEAAASAAAINKNNSCKELAKEEVDLEL 237

[Close]

BLAST of MELO3C003401T1 vs. TAIR10
Match: AT4G17810.1 (AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-31
Identity = 93/220 (42.27%), Postives = 110/220 (50.00%), Query Frame = 1


Query: 27  NPNGVNPMQTPDVVVDDDDSWEVRAFAEDT-ANVMGTTWPPRSYTCTYCRREFRSAQALG 86
           NPN +  ++      DDD+SWEV+AF +DT  N+ GTTWPPRSYTC +CRREFRSAQALG
Sbjct: 9   NPNKIEELE------DDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALG 68

Query: 87  GHMNVHRRDRA--RLHH------QAPSSSSNPMKPSSTSSSNSNSFIIPTPDFNGGGSLC 146
           GHMNVHRRDRA  R H        A S     +  S      + + II +   N  G L 
Sbjct: 69  GHMNVHRRDRASSRAHQGSTVAAAARSGHGGMLLNSCAPPLPTTTLIIQSTASNIEG-LS 128

Query: 147 LLYQFPNPNSINGGINTSPSTLNAYIHSPSSL-FSMPHHSFNTYPSSTSLSAAFPMNDNN 206
             YQ  NP+ I G      +        PS+L FSM +      P               
Sbjct: 129 HFYQLQNPSGIFGNSGDMVNLYGTTSFPPSNLPFSMLNSPVEVPP--------------- 188

Query: 207 HRRLETSTYS----ASMENNNGSSQDEVLDLELRLGHGPP 233
            R +E ST       SM+   G+S DE LDLELRLGH PP
Sbjct: 189 -RLIEYSTGDDESIGSMKEATGTSVDE-LDLELRLGHHPP 204

[Close]

BLAST of MELO3C003401T1 vs. TAIR10
Match: AT2G37740.1 (AT2G37740.1 zinc-finger protein 10)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-22
Identity = 54/93 (58.06%), Postives = 60/93 (64.52%), Query Frame = 1


Query: 44  DDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARL----- 103
           + SWE  AFAED A   G+ WPPRSYTC++CRREF+SAQALGGHMNVHRRDRARL     
Sbjct: 16  ESSWEELAFAEDDA--AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADD 75

Query: 104 HHQAPSSSSNPMKPSSTSSSNSNSFIIPTPDFN 132
            +  P SSS+P  PS   S N +     T  FN
Sbjct: 76  QYLFPKSSSSPEYPSHKDSDNIHETSCYTLVFN 106

[Close]

BLAST of MELO3C003401T1 vs. TAIR10
Match: AT3G23130.1 (AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20
Identity = 65/180 (36.11%), Postives = 88/180 (48.89%), Query Frame = 1


Query: 54  EDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLH-HQAPSSSSNPMKP 113
           +D   ++G +WPPRSYTC++C+REFRSAQALGGHMNVHRRDRARL   Q+PSSSS P  P
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPP 91

Query: 114 SSTSSSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSM 173
               + + ++     P  +   +L      P+      G+  S S  + +          
Sbjct: 92  YPNPNYSYSTMANSPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKH---------T 151

Query: 174 PHHSFNTYPSSTSLSAA----FPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLG 229
           P ++  T  SS  + A     F   D           S  +E    +  ++ LDLELRLG
Sbjct: 152 PENACKTKKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLG 202

[Close]

BLAST of MELO3C003401T1 vs. TAIR10
Match: AT2G42410.1 (AT2G42410.1 zinc finger protein 11)

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-18
Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 1


Query: 64  WPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARL----------HHQAPSSSSNPMKPS 123
           WPP++YTC++CRREFRSAQALGGHMNVHRRDRA+L          HH  P ++ NP   S
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSS 103

Query: 124 STSSSNSNSFIIPT 128
           S+SSS + + + P+
Sbjct: 104 SSSSSTTTAHLEPS 117

[Close]

BLAST of MELO3C003401T1 vs. TAIR10
Match: AT5G06070.1 (AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 85.1 bits (209), Expect = 6.9e-17
Identity = 70/203 (34.48%), Postives = 88/203 (43.35%), Query Frame = 1


Query: 48  EVRAFA--EDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSS 107
           E RAFA  E+     G  WPPRSY+C++C REF+SAQALGGHMNVHRRDRARL  Q+   
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQS--- 91

Query: 108 SSNPMKPSSTSSSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHS 167
               + PSST  +            + G  + +  +   PN     I  S    N  + S
Sbjct: 92  ----LSPSSTDQATPPECDRQQQVLDVGSKVLVQEETRKPNGTKREI--SDVCNNNVLES 151

Query: 168 PSSLFSMPHHSFNTYPSSTSLSAAFPM--------NDNNHRRLETSTYSASM-------- 227
               +   +    T  S   LS  F          + ++ +R +T      M        
Sbjct: 152 SMKRYEHDNGEVKTDLSVGLLSTEFDPRKKQLINGSSSSWKRAKTDVSRFPMMLGLVIGI 211

Query: 228 ENNNGSSQDEVLDLELRLGHGPP 233
              NG    E LDLELRLG  PP
Sbjct: 212 SEING--HHEELDLELRLGADPP 223

[Close]

BLAST of MELO3C003401T1 vs. NCBI nr
Match: gi|659132000|ref|XP_008465962.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 536.6 bits (1381), Expect = 2.5e-149
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1


Query: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM 60
           MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM
Sbjct: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM 60

Query: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNS 120
           GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNS
Sbjct: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNS 120

Query: 121 NSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSMPHHSFNTY 180
           NSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSMPHHSFNTY
Sbjct: 121 NSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSMPHHSFNTY 180

Query: 181 PSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLGHGPPSSTQNLME 240
           PSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLGHGPPSSTQNLME
Sbjct: 181 PSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLGHGPPSSTQNLME 240

Query: 241 KGEKKVSNSEAACLKKRSSD 261
           KGEKKVSNSEAACLKKRSSD
Sbjct: 241 KGEKKVSNSEAACLKKRSSD 260

[Close]

BLAST of MELO3C003401T1 vs. NCBI nr
Match: gi|449461557|ref|XP_004148508.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 6.9e-144
Identity = 252/260 (96.92%), Postives = 257/260 (98.85%), Query Frame = 1


Query: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM 60
           MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM
Sbjct: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM 60

Query: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNS 120
           GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNS
Sbjct: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTSSSNS 120

Query: 121 NSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSMPHHSFNTY 180
           NSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTS STLNAYIHSPSSLFSMPHHSFNTY
Sbjct: 121 NSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSSSTLNAYIHSPSSLFSMPHHSFNTY 180

Query: 181 PSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLGHGPPSSTQNLME 240
           PSSTS+S AFPMND+NHRRLETSTYSASMENNNG SQDEVLDLELRLGHGPPSSTQNLME
Sbjct: 181 PSSTSVSQAFPMNDDNHRRLETSTYSASMENNNG-SQDEVLDLELRLGHGPPSSTQNLME 240

Query: 241 KGEKKVSNSEAACLKKRSSD 261
           KGEKK+S+SEAACLK+RSSD
Sbjct: 241 KGEKKISDSEAACLKERSSD 259

[Close]

BLAST of MELO3C003401T1 vs. NCBI nr
Match: gi|566146807|ref|XP_006368408.1| (hypothetical protein POPTR_0001s02530g [Populus trichocarpa])

HSP 1 Score: 203.8 bits (517), Expect = 3.8e-49
Identity = 126/255 (49.41%), Postives = 159/255 (62.35%), Query Frame = 1


Query: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVV-------DDDDSWEVRAFA 60
           MAAE+  G    + L  L ++ ++    + +NP +TP V +       ++DDSWEVRAFA
Sbjct: 1   MAAEI--GLLSLTQLQKLPQSQQNQYQLHQLNPNETPSVWMWNPKQTQEEDDSWEVRAFA 60

Query: 61  EDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPS 120
           EDT N+ GTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARLH   P  S NP   S
Sbjct: 61  EDTGNINGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQTQP-GSINP--NS 120

Query: 121 STSSSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNA-YIHSPSSLFSM 180
           STSSS+S++FIIPT +F     LCLLYQ PNPN +      +P+T+NA    SPS+L S+
Sbjct: 121 STSSSSSSTFIIPTQEFPPNAGLCLLYQLPNPNGV-----FTPATMNACATDSPSTLLSI 180

Query: 181 -PHHSFNTYPSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQD--------EVLDL 235
            P+   N    S +   A P  + +H     +  SAS++N+N  + D        E LDL
Sbjct: 181 TPYPHNNLIEKSLNFLVAPPEINTSHCYSIKAEPSASIDNSNNINSDNNFKELAHEELDL 240

[Close]

BLAST of MELO3C003401T1 vs. NCBI nr
Match: gi|255557589|ref|XP_002519824.1| (PREDICTED: transcriptional regulator SUPERMAN [Ricinus communis])

HSP 1 Score: 201.4 bits (511), Expect = 1.9e-48
Identity = 121/242 (50.00%), Postives = 155/242 (64.05%), Query Frame = 1


Query: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNP----MQTPDVVVDDDDSWEVRAFAEDT 60
           MAAEL L       L  L+E+ ++ Q+ + +N     M  P    +D+DSWEVRAF EDT
Sbjct: 1   MAAELGLLSLAQLELQKLAESQQN-QHQHQLNSSSSWMWNPKQTHEDEDSWEVRAFEEDT 60

Query: 61  ANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTS 120
            N+MGTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARL HQ P  S NP   SST+
Sbjct: 61  GNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARL-HQTPPGSINP-NSSSTN 120

Query: 121 SSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYIHSPSSLFSMPHHS 180
           S+++++FIIP  +F+  G LCLLYQ PNPN I     T+     A  HSPS+L S+  + 
Sbjct: 121 STSASTFIIPAREFSTNGGLCLLYQLPNPNGI---FTTTAMNACAIDHSPSTLLSISPYP 180

Query: 181 FNTYPSSTSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQD---EVLDLELRLGHGPPS 236
            N YP       A P+ +++H     +   AS +N++ + +D   E LDLELRLGH   S
Sbjct: 181 HN-YP------VASPVVNSSHFYSSKAQPVASTDNSSNNCKDLGNEELDLELRLGHRSTS 229

[Close]

BLAST of MELO3C003401T1 vs. NCBI nr
Match: gi|590675681|ref|XP_007039516.1| (Palmate-like pentafoliata 1 transcription factor [Theobroma cacao])

HSP 1 Score: 200.3 bits (508), Expect = 4.2e-48
Identity = 112/216 (51.85%), Postives = 133/216 (61.57%), Query Frame = 1


Query: 32  NPMQTPDVVVDDDDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVH 91
           NP   P    +DDDSWEVRAFAEDT N+MGTTWPPRSYTCT+CRREFRSAQALGGHMNVH
Sbjct: 40  NPKAQPQ---EDDDSWEVRAFAEDTGNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVH 99

Query: 92  RRDRARLHHQAPSSSSNPMKPSSTSSSNSNSFIIPTPDFNGGGSLCLLYQFPNPNSI--- 151
           RRDRARLH   PS + NP   SST+S  S++ +IPT +F   G LCLLYQ PNPN +   
Sbjct: 100 RRDRARLHQTQPSGAINPTSSSSTTS--SSTVLIPTQEFGTNGGLCLLYQLPNPNGVFTS 159

Query: 152 ---NGGINTSPSTLNAYIHSPS-SLFSMPHHSFNTYPSSTSLSAAFPMNDNNHRRLETST 211
              N   N SPSTL +    PS +L   P  +F   P   + S++   +       +TS 
Sbjct: 160 PPMNACSNDSPSTLLSISPYPSNNLMEAPSLNFPVTPQGLNNSSSLCYSSKAEPSTQTSA 219

Query: 212 YSA------SMENNNGSSQDEVLDLELRLGHGPPSS 235
            +       S  NN   +  E LDLELRLGH P +S
Sbjct: 220 DNCINNIGNSSSNNCKETSIEELDLELRLGHRPTTS 250

The following BLAST results are available for this feature:

BLAST of MELO3C003401T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SUP_ARATH	3.1e-19	36.11	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1	[more]
RBE_ARATH	1.2e-15	34.48	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE...	[more]
TAC1_ARATH	1.6e-07	49.02	Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1	[more]
KNU_ARATH	8.8e-06	27.61	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1	[more]

BLAST of MELO3C003401T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF36_CUCSA	4.8e-144	96.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902400 PE=4 SV=1	[more]
B9MU16_POPTR	2.6e-49	49.41	Palmate-like pentafoliata 1 transcription factor OS=Populus trichocarpa GN=PALM1...	[more]
B9S1F9_RICCO	1.3e-48	50.00	Palmate-like pentafoliata 1 transcription factor OS=Ricinus communis GN=PALM1 PE...	[more]
A0A061G496_THECC	2.9e-48	51.85	Palmate-like pentafoliata 1 transcription factor OS=Theobroma cacao GN=TCM_01572...	[more]
A0A067JUG6_JATCU	3.8e-48	48.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20102 PE=4 SV=1	[more]

BLAST of MELO3C003401T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17810.1	8.4e-31	42.27	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	5.5e-22	58.06	zinc-finger protein 10	[more]
AT3G23130.1	1.8e-20	36.11	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	3.7e-18	55.41	zinc finger protein 11	[more]
AT5G06070.1	6.9e-17	34.48	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of MELO3C003401T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132000\|ref\|XP_008465962.1\|	2.5e-149	100.00	PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]	[more]
gi\|449461557\|ref\|XP_004148508.1\|	6.9e-144	96.92	PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus]	[more]
gi\|566146807\|ref\|XP_006368408.1\|	3.8e-49	49.41	hypothetical protein POPTR_0001s02530g [Populus trichocarpa]	[more]
gi\|255557589\|ref\|XP_002519824.1\|	1.9e-48	50.00	PREDICTED: transcriptional regulator SUPERMAN [Ricinus communis]	[more]
gi\|590675681\|ref\|XP_007039516.1\|	4.2e-48	51.85	Palmate-like pentafoliata 1 transcription factor [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2
IPR015880	Zinc finger, C2H2-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C003401	MELO3C003401	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C003401T1	MELO3C003401T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C003401T1.cds1	MELO3C003401T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PFAM	PF13912	zf-C2H2_6	coord: 69..92 score: 8.
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 71..91 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 69..96 score: 11
IPR015880	Zinc finger, C2H2-like	SMART	SM00355	c2h2final6	coord: 69..91 score: 0.
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 40..147 score: 9.6E-63coord: 171..240 score: 9.6
None	No IPR available	PANTHER	PTHR26374:SF213	SUBFAMILY NOT NAMED	coord: 171..240 score: 9.6E-63coord: 40..147 score: 9.6
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 66..96 score: 2.4