MELO3C003262T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003262T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	FRIGIDA-like protein, putative
Location	chr8 : 31698580 .. 31702750 (-)
Sequence length	1005

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAAGAGCAGTAAGAATATTGAAGCTGTTGATATTATTTATGCTTTTGGTATGGAGGATGTATTTCCACCACAGGAAATTCTGTTGTCATTTCTCCAAGAGTGTGATGAAACGTGGAAAAAAAGAATAAATGAAGTACGAGGTTCAACCATGCAACTGGTATAGTTTATCTCGACCTATGGGCATTAATTTAGTCTTTATAAATTACAATGCATGTTTTCATTCTTTTATTTTGCTTTAACATAACATTTCATTCATTTGTGAAATATTTGGAAAGAGTATACCAAGAAGCTCTTTCCTTTGTAAGTTGGGATTGGATTCTTTGAAGGGGCATTTGGAGAAGGAGTTGGTTACTATAGTCTTAGGTTGTTATAGTTGGGTTATAATAGTTTTTGGTTGACCTAGTGATAAAAAAGATAACCAAGGGTCTATTTGGTAGAGAATCTGGATTGTGTTTTATGTTTTCAGATTCACTGAGTTCAACAGACATACATTTGACAGGCAATTCGGATTCTGTTTTCGAAAACTGTTTTCAGACTTTGTGATCCAAATAGTGCAAATTCTGAAACCAACAATTTAATATCTTCATTATATCCAAAATTTGAATTTTACATTTTAAAAAGCAGAATTATATTGACATATAAGCATATTTAAAAATACGATATGACATGTTATAAACTCATATTTTTTAATATAATATGTATTATGTAATGTATTATAAATTATATAATATTACAAAATAATAACTACATAAATTTTTAGGTTAAATTACAAATTAAGGTTTTCAAATCACAAAGACTATGTATGAGATTTTGTCAAACTATAGAGTCATAGAATAAACTCCAACTTTCTCCAAGCCATTGTGACTAATTTTGCAATTTAATCAAAATTTTGAACATAAACTATATTCATAAATAAATTAATAATAGCTTATTGTCAACTAAATATTAGTGGATAAAGTAAGATTAGTTTTATTATTTATAAGTATATAATACGAAACACATTTGAACATTTTTCAAAATTAGAATTCAATTTTTTATCTGTCACAACTTTGTTTTAATTAAATTCATTGCTTTCAAATTTATGTTTTTAGATTCTTTGTTAAATGCCCAAGAGGTCAAGGGTTCAATTCATGGTGGTCACCTACCTAGGAATTTTCTACAAGTTCCTTGACATCCCAGTGTTGTAGGGTCAGGTGGGTTATAAAAAAAACAAGTTTACATTTGAGGGGTAGATTATTTTAGTTTGAGTTATAATATTGTTTGAGCGAGAAGGAAATGATAAACAATGTATTATAGAATAAAAAATGATGAATGTAAAATAGTACCAGTCGTAGCAAATGGAGGTCTAGAAATAGTGTTAAATGTTAATCGTAGCTAATTGGAGAGTATAAAATAATATTCCCCGTAGCAATTAGTGGTTATTATAGTCTTAAAGATAGTCCTTGCTCCAAATTCTCCCTTAGATGTTGCCATTCATTTAATTTGCTATTCATTTAATTTGTAATGTTCTCTCCTTTTAAAGTTCTATGTTTCCCATCCAGACAAATGAAAAAACAAAAATAAAACAGTAATACTATTACTTATATAGGATTTTTTGAGGTTAAATTATATATTTCTTAGGCTGTTTTGGCTAGTGTTTATCGTAAGCCTAAGGAGTATGTGGGTTGAGTTGTACTTATGTGGGTTGAGTTGTATTTGATGCTTTATTGGTTCTGAATTTTTTGTTTTGGTTGATTTTATTTAGTTATTTTCTTCTTTTGTCAGATGTCACTCATTGTAATCTTCACAATCTTTTTCTTTTGGTTGGTGGGTGGGGGTGGGGATAAAGTAATTTTCACAATTTCTAATTATATCCTCAAAAGTAGTTTTAGTCAGTGTTTTCAAGGCGCATGGCGCACTCTAAGATGACAAATTTTTTTAGTCGCATGAAGGCAAGAGGCGACAAAAAGGCGTCATCTGATTGAAGCGATGCACACTAATGAAAATAATAAAAAATATTATTAGAAATAAAAAATACTCAAGATTAGAGAGAACAAAGAAATTAACTCATAATCTTGAGGAAAACGTTTTTGAAAAAGATATATAAATAAAAATGCTTTTTAAATAGGAAAGAAGATAGTGGTATGAGTAGTCTTTATTAGATTAGAAATATTGTCATTTGACAATTTGGCTAGCATGCACTAGCAATTTTTTATTTGGTAGCCCTATGTTCAATTTTTCCCCAACTGCTGATGAATGAATGAAGAAAAAAGAGGAAGGAGAGACAACATCTCCTATTTTGTTTTTACTTCTTTTGACTCTTTCTTGCTTCAATTCTTCTCCCTTTCTTTGATTTTTCTTTAATTTTATCTTTACAAACTTGGATATTTCCTCTAGTCTTAATCAAAGTATTGGAGATGAATTTCTTTCTTCTAAAAAATAAAAAGTTGAACAATTGGACAAGCCAAGTGCCTAGGTCGCTTTTGAACGAATGTTCAAGGCGATTGAAAAGCATAAAAGAGGAGCGCCTTGCGAAAGGTGCTCGCCTTGGGTACTTACAAGGTGTTAAGGCCTCACCTTGCCTTGCCTCTCACCTCAGGCAAGCACCTGTCTGCGCCTCAACAACCCTGGTTTTAGTCTGGATTTTTTTTAATCAAATAAACAATAATGAAAGCAAATAATATCCGTAGTTTTCTTTTTAAACAGAAACTTCTCTTTTCATTGAAGTAATGAACTCACGACCAACCAGACCAATTGAAAACATTAGCTATTGTGTATAACAAATACAAGTCTGCCCGTCTACGTGGAAAGAGGCACCTTCGTGCTTTTTAATCCCACGTCATTTACATTTTTTCCCTAGTTCACTTGCCCAATCAAGGGGGAAAACCTCATTTTATCAGAAAAAATTCAATGAAGAGACTTGTTTTCATTTTAAAAAACATATTAGCCAATGTTTGAAGATAATCTTCCGTACCATATCCACATTTGATTTATTTTGAGCTGGGAGTCTAATGAAAAGTTCAATTGAAAATTTCAAAAGTTTATGGACGAGATGGAATAAATGCATAGTTAATTGGGTGAAATTTGGAATTTGGAGAGGGTTTTTCAAACCCTTGAAGTGGTCAGAAAATCAAGATTAGAGTAATGCATATTCTATTTCATTTACTTTTGATTCTCTCAATGTGAGGTTATGTTTAGTTTTTGTTGTCAAGCCCTCGTTTTGCTTGGTGAATTTACTTATGTTCCCTGAGGTTTCTCTCAGCAAGTTCTGCTCCAACATCTTTAACTTGTTCTTCTCCCTATTATTGTAATTACTTACCTTCTAGATATGTTGTTTTTGACAGAGACGGGTGAGTGAAGAGAAATTAGCTTCTCTGAAATGTGTTCTCAAATGTTTGGAAGATCACAAGTTGGATCCTGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAAAACTTGGAGAAGGATATTGTGGAACTTAGGAAAAGAATGGAAGATAATGCGAGTCTGAAGAGAAAAACAGACGAAGCTTCCACACAGAAGTATCTGAGTCAGGAAATAAAGCGGTCGCGATTGGCAAGTAAGGGAGGATTCCCTGTTATGTCTTATCCAGTCAATGGTTTGTTGGAACAAAATGCAGCTACGTTTTTGGAGGACAAGAGCTGTTTCAGTACTAGTAGTAGTTCAATGCCACAAAAGTTATTGGATGGTGGACGTGCTTCTCAGTTAGGTAATTACCAAATTGCTTCGTCTTTGCGTGGACCTGGTTTGCTTGAAACTACAGTTTTGCCTGCGGATATTGGTAGTGGTATCACCAATGCTGCTGCCTCATTCCCCAGAGGAATGGGAAGGGGAAGGGACAGCAACGAGGCTTCCATTTACAAAATGGGGCCAACTCGTGAGTTAGCTTATAAAGATATATCAGTTGGGCAAAGCTTTATTCAACAAGCTATGCCTACACTTGCAACAACCCCTACGCCACCGCCAACAACCGTGGAGCCTTATTCAGCTGTAGATGGGTTCATGGGACACTCAACGAGCAATAATTTTGATCTCTATCATTTTGCTGATGCAGCTGTGTTCGAAAATGATCTGCCCAAGAACAGCACCAGTCAAACTGGCACTTTGTCTCGCCTTCGGCTGCCCCATAATCACCATCCTCCCTACTTTTACAATTGA

mRNA sequence

ATGACGAAGAGCAGTAAGAATATTGAAGCTGTTGATATTATTTATGCTTTTGGTATGGAGGATGTATTTCCACCACAGGAAATTCTGTTGTCATTTCTCCAAGAGTGTGATGAAACGTGGAAAAAAAGAATAAATGAAGTACGAGGTTCAACCATGCAACTGAGACGGGTGAGTGAAGAGAAATTAGCTTCTCTGAAATGTGTTCTCAAATGTTTGGAAGATCACAAGTTGGATCCTGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAAAACTTGGAGAAGGATATTGTGGAACTTAGGAAAAGAATGGAAGATAATGCGAGTCTGAAGAGAAAAACAGACGAAGCTTCCACACAGAAGTATCTGAGTCAGGAAATAAAGCGGTCGCGATTGGCAAGTAAGGGAGGATTCCCTGTTATGTCTTATCCAGTCAATGGTTTGTTGGAACAAAATGCAGCTACGTTTTTGGAGGACAAGAGCTGTTTCAGTACTAGTAGTAGTTCAATGCCACAAAAGTTATTGGATGGTGGACGTGCTTCTCAGTTAGGTAATTACCAAATTGCTTCGTCTTTGCGTGGACCTGGTTTGCTTGAAACTACAGTTTTGCCTGCGGATATTGGTAGTGGTATCACCAATGCTGCTGCCTCATTCCCCAGAGGAATGGGAAGGGGAAGGGACAGCAACGAGGCTTCCATTTACAAAATGGGGCCAACTCGTGAGTTAGCTTATAAAGATATATCAGTTGGGCAAAGCTTTATTCAACAAGCTATGCCTACACTTGCAACAACCCCTACGCCACCGCCAACAACCGTGGAGCCTTATTCAGCTGTAGATGGGTTCATGGGACACTCAACGAGCAATAATTTTGATCTCTATCATTTTGCTGATGCAGCTGTGTTCGAAAATGATCTGCCCAAGAACAGCACCAGTCAAACTGGCACTTTGTCTCGCCTTCGGCTGCCCCATAATCACCATCCTCCCTACTTTTACAATTGA

Coding sequence (CDS)

ATGACGAAGAGCAGTAAGAATATTGAAGCTGTTGATATTATTTATGCTTTTGGTATGGAGGATGTATTTCCACCACAGGAAATTCTGTTGTCATTTCTCCAAGAGTGTGATGAAACGTGGAAAAAAAGAATAAATGAAGTACGAGGTTCAACCATGCAACTGAGACGGGTGAGTGAAGAGAAATTAGCTTCTCTGAAATGTGTTCTCAAATGTTTGGAAGATCACAAGTTGGATCCTGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAAAACTTGGAGAAGGATATTGTGGAACTTAGGAAAAGAATGGAAGATAATGCGAGTCTGAAGAGAAAAACAGACGAAGCTTCCACACAGAAGTATCTGAGTCAGGAAATAAAGCGGTCGCGATTGGCAAGTAAGGGAGGATTCCCTGTTATGTCTTATCCAGTCAATGGTTTGTTGGAACAAAATGCAGCTACGTTTTTGGAGGACAAGAGCTGTTTCAGTACTAGTAGTAGTTCAATGCCACAAAAGTTATTGGATGGTGGACGTGCTTCTCAGTTAGGTAATTACCAAATTGCTTCGTCTTTGCGTGGACCTGGTTTGCTTGAAACTACAGTTTTGCCTGCGGATATTGGTAGTGGTATCACCAATGCTGCTGCCTCATTCCCCAGAGGAATGGGAAGGGGAAGGGACAGCAACGAGGCTTCCATTTACAAAATGGGGCCAACTCGTGAGTTAGCTTATAAAGATATATCAGTTGGGCAAAGCTTTATTCAACAAGCTATGCCTACACTTGCAACAACCCCTACGCCACCGCCAACAACCGTGGAGCCTTATTCAGCTGTAGATGGGTTCATGGGACACTCAACGAGCAATAATTTTGATCTCTATCATTTTGCTGATGCAGCTGTGTTCGAAAATGATCTGCCCAAGAACAGCACCAGTCAAACTGGCACTTTGTCTCGCCTTCGGCTGCCCCATAATCACCATCCTCCCTACTTTTACAATTGA

Protein sequence

MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEASTQKYLSQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDGGRASQLGNYQIASSLRGPGLLETTVLPADIGSGITNAAASFPRGMGRGRDSNEASIYKMGPTRELAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVDGFMGHSTSNNFDLYHFADAAVFENDLPKNSTSQTGTLSRLRLPHNHHPPYFYN*

Homology

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BLAST of MELO3C003262T2 vs. Swiss-Prot
Match: FRIGI_ARATH (Protein FRIGIDA OS=Arabidopsis thaliana GN=FRI PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.5e-21
Identity = 57/143 (39.86%), Postives = 87/143 (60.84%), Query Frame = 1


Query: 3   KSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEEKL 62
           K   +IEA++++Y FGMED F    +L SFL+   E++++   + + S +  +  + ++L
Sbjct: 326 KRGMHIEALEMVYTFGMEDKFSAALVLTSFLKMSKESFERAKRKAQ-SPLAFKEAATKQL 385

Query: 63  ASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNA-SLKRKTDEAST 122
           A L  V++C+E HKLDP K LPGW+I E I +LEKD ++L K ME+ A SL    + A  
Sbjct: 386 AVLSSVMQCMETHKLDPAKELPGWQIKEQIVSLEKDTLQLDKEMEEKARSLSLMEEAALA 445

Query: 123 QKYLSQEIKRSRLASKGGFPVMS 145
           ++  +Q+IKR RL+     PV S
Sbjct: 446 KRMYNQQIKRPRLSPMEMPPVTS 467

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BLAST of MELO3C003262T2 vs. TrEMBL
Match: A0A0A0KYX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G437530 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 4.7e-176
Identity = 317/338 (93.79%), Postives = 326/338 (96.45%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           MTKSSKNIEAVDIIYAFGME+VFPPQEILLSFLQECDETWKKRIN+VRGSTMQLRRVSEE
Sbjct: 275 MTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVRGSTMQLRRVSEE 334

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEAS 120
           KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVEL KRMEDNASLKRKTDEAS
Sbjct: 335 KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASLKRKTDEAS 394

Query: 121 TQKYLSQEIKRSRL-ASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDG 180
           TQKYLSQEIKRSR+ A+KGGFPVMSYPVNGLLEQNA TFLEDKSCFSTSSSSMP KLLDG
Sbjct: 395 TQKYLSQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDG 454

Query: 181 GRASQLGNYQIASSLRGPGLLETTVLPAD-IGSGITNAAASFPRGM--GRGRDSNEASIY 240
           GRASQLGNYQIASSLRGPGL+ETTVLPAD IGSGI+NAAA FPRGM  GRGRDSNEASIY
Sbjct: 455 GRASQLGNYQIASSLRGPGLVETTVLPADIIGSGISNAAAPFPRGMGWGRGRDSNEASIY 514

Query: 241 KMGPTRELAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVDGFMGHSTSNNFDLYH 300
           KMGPTRE AYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAV GFMGHSTSNNFDLYH
Sbjct: 515 KMGPTREFAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVYGFMGHSTSNNFDLYH 574

Query: 301 FADAAVFENDLPKNSTSQTGTLSRLRLPHNHHPPYFYN 335
           FADAAVFENDLPKN ++QTGTLSRLRLPH+HHP YFYN
Sbjct: 575 FADAAVFENDLPKNRSTQTGTLSRLRLPHHHHPSYFYN 612

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BLAST of MELO3C003262T2 vs. TrEMBL
Match: K7KVE1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G162100 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.9e-34
Identity = 107/305 (35.08%), Postives = 154/305 (50.49%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           M K    ++AVD+ Y FG E+ + PQ  L SFLQ+ +ETWKK   + R     L+   E+
Sbjct: 295 MMKKGMAVKAVDLAYTFGFEEKYSPQTALTSFLQKSEETWKKAKQDARDFPSALKVAHEK 354

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDE-A 120
            LA+L+ V+KCLE HK+DPVK LPGW++   I NLEKDI +  K++++ + LKRK D+  
Sbjct: 355 YLAALQSVVKCLEGHKIDPVKFLPGWQLKNKITNLEKDISDTNKKIDEKSMLKRKVDKNN 414

Query: 121 STQKYLSQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDG 180
           S+ K    E KR+R   K    V+S  +  L EQ   + ++  S +  S S+    LLDG
Sbjct: 415 SSNKMKIPEAKRARFTGKDA-SVLSPSLATLQEQRIFSRMDGNSSYDGSLSA---HLLDG 474

Query: 181 GRASQLGNYQIASSLRGPGLLETTVLPADIGSGITNAAASFPRGMGRGRDSNEASIYKMG 240
                  N  + ++     L E       +GS + + A      MG      +  +Y+  
Sbjct: 475 RSYGNYPNNYLTAASASDSLAEKY-----LGSAVASGANMLGGAMGGSFSGYQGDMYRYH 534

Query: 241 PTRELAYK-DISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVDGFM---GHSTSNNFDLY 300
              E A   D SVGQSF+ Q+  TL        T+ E ++ V   +     S S   DLY
Sbjct: 535 GIGEGALSHDRSVGQSFVGQSASTL--NNLYGKTSTEGFAGVPEHLSVGASSRSGGSDLY 588

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BLAST of MELO3C003262T2 vs. TrEMBL
Match: A0A067JI55_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26334 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32
Identity = 94/228 (41.23%), Postives = 128/228 (56.14%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           M      IEAVD+ Y FG+E  FPPQ++L SFL++ +E  K+R  E   S + L+  SE+
Sbjct: 340 MMNHGAKIEAVDVAYTFGVEKKFPPQKLLTSFLRDSNEALKRRKREANISPIVLKEASEK 399

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEAS 120
           ++A+LK V+K LED K DP K LPGW++ EMI  LEK+I ++ K++ D  + KRK DE  
Sbjct: 400 QVAALKTVIKLLEDRKFDPTKLLPGWQLREMIDKLEKEIGDINKKIADKVTPKRKADENE 459

Query: 121 TQKYL-SQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDG 180
               L SQE KRSR     G P++S P  GL EQ AA  ++  S F   S+S+   LLDG
Sbjct: 460 FASNLRSQETKRSRFT---GSPLISSPSIGLHEQRAAGHVDGNSLF---SASLRMNLLDG 519

Query: 181 GRASQLGNYQIASSLRGPGLLETTVLPADIGSGITNAAASFPRGMGRG 228
           G + Q  N   A  +  P       LP +   G+     S  +G G G
Sbjct: 520 GFSGQTNNPASAGPM--PYGYSVPSLP-EHAIGMVKGGGSILQGAGVG 558

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BLAST of MELO3C003262T2 vs. TrEMBL
Match: E0CRY5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00060 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.9e-31
Identity = 108/324 (33.33%), Postives = 156/324 (48.15%), Query Frame = 1


Query: 7   NIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEEKLASLK 66
           N+EAVD  Y FG+E+ FP  +IL SFL+E  E WK+   E   S ++L++ +E  L+++K
Sbjct: 2   NVEAVDFAYTFGLEEKFPIWKILTSFLREHKEEWKRTREE--DSPIRLKKANENYLSAMK 61

Query: 67  CVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEA-STQKYL 126
            V +CLEDH++DP K L GW I E I  LEK++ +L K+ME    LKRK DE  S +K  
Sbjct: 62  SVTRCLEDHRVDPSKLLSGWHIDEKIIQLEKEMADLDKKMEGKVMLKRKADEIDSLKKMK 121

Query: 127 SQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDGGRASQL 186
           ++EIK S +A+          V GL EQ  A  +  +S +    S+MP   LD G    +
Sbjct: 122 TREIKHSPIAAPSS-------VIGLQEQRVADNMASRSFY---DSTMPINFLDSGFPGHI 181

Query: 187 GNYQIASSL---RGPGLLETTVL------------------PADIGSGITNAAASFPRGM 246
             Y  AS++    G G L   +                   P   G+G   + ASF    
Sbjct: 182 STYPAASAMLHGSGGGSLPENITGTMSGSGSGTRVHGTGTGPGMAGTGGVPSMASFSGAH 241

Query: 247 GRGRDSNEASIYK-MGP----TRELAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSA 301
           G         + K  GP     R++ + D  +GQSFI         +   P T++E +  
Sbjct: 242 GEMLFDRTGQMMKNNGPPYAGRRDMGFNDRVIGQSFIAHPASMGVDSIFGPSTSMESFPG 301

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BLAST of MELO3C003262T2 vs. TrEMBL
Match: B9RA29_RICCO (Protein FRIGIDA, putative OS=Ricinus communis GN=RCOM_1502940 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 9.3e-31
Identity = 103/305 (33.77%), Postives = 156/305 (51.15%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           M  +   IEA+D+ Y FG+ED FPPQ++L SFL++  E  K+R  E   S + L+  S++
Sbjct: 314 MMNNGMKIEAIDVAYTFGIEDKFPPQKLLTSFLRDSKEALKRRRREANNSPVLLKEASQK 373

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEAS 120
            L++LK  +K LE  KLDP K LPGW++ E I  LEK+I +L ++++D  + KRK DE  
Sbjct: 374 HLSTLKSAMKFLEGRKLDPKKLLPGWQVTEKIDKLEKEIADLNRKIDDKVAPKRKADENE 433

Query: 121 TQKYL-SQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDG 180
               L SQE+KR R     G P++S P  GL EQ   + L+    ++ S+      ++DG
Sbjct: 434 FSINLKSQEVKRLRFT---GSPLISSPSFGLHEQRVPSHLDGNGSYNASTRI---NMVDG 493

Query: 181 GRASQLGNYQIASSLRGPGLLETTVLPADIGSGITNAAASFPRGMGRGRDSN----EASI 240
           G +  + N  +A S+    L  +    A  G   T++ A   R     R  N      S 
Sbjct: 494 GFSCLISNPPVAGSM----LYGSGSYSAAYGVPSTSSFAGVYRETLADRTGNITGSNVSA 553

Query: 241 YKMGPTRELAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVDGFMGHSTSNNFDLY 300
           +      + +  D + GQS + Q+   L   P+       P S+  G    S+++  DLY
Sbjct: 554 FGWHGVGDASIIDGTRGQSLVHQSGSGL-FGPSIEGFAGLPNSSPAGAANQSSAS--DLY 605

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BLAST of MELO3C003262T2 vs. TAIR10
Match: AT3G22440.1 (AT3G22440.1 FRIGIDA-like protein)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06
Identity = 27/99 (27.27%), Postives = 52/99 (52.53%), Query Frame = 1


Query: 6   KNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEEKLASL 65
           + ++AV   Y  G+ D FPP  +L ++L++  ++    + +   +      V+ ++ ++L
Sbjct: 315 QQLDAVHFTYEVGLVDKFPPVPLLKAYLRDAKKSAASIMEDSSNTGRATHLVARKEQSAL 374

Query: 66  KCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRK 105
           K VLKC+E++KL+  +  P   + + +  LEK   E RK
Sbjct: 375 KAVLKCIEEYKLE--EEFPPENLKKRLDQLEKTKTEKRK 411

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BLAST of MELO3C003262T2 vs. TAIR10
Match: AT5G16320.1 (AT5G16320.1 FRIGIDA like 1)

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-06
Identity = 42/160 (26.25%), Postives = 69/160 (43.12%), Query Frame = 1


Query: 4   SSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEEKLA 63
           S K I AV  +Y  GM D F P  +L S++++C E   +   E   S       S+++++
Sbjct: 267 SGKPILAVKFMYECGMTDEFEPIPVLKSYIKDCREAALRVCVEDNYSLKSQNEASDKEVS 326

Query: 64  SLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEASTQK 123
           +LK ++K ++D  L+        K+ E ++ LEK          + A  KR T     Q+
Sbjct: 327 ALKPLIKIIKDQNLE--SEFTQEKVEERVEELEK----------NKALRKRNTTNPPKQE 386

Query: 124 YLSQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKS 164
              +  KR+R    G    +  P   LL +  A  + + S
Sbjct: 387 PQQKGKKRTRDCKNGS--QVPVPSQQLLSRPEALLMPEHS 412

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BLAST of MELO3C003262T2 vs. TAIR10
Match: AT5G48385.1 (AT5G48385.1 FRIGIDA-like protein)

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-06
Identity = 31/107 (28.97%), Postives = 53/107 (49.53%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           +  S K I+AV++ +AF + + F P  +L S+L E   +   +      S       +E 
Sbjct: 360 LVNSGKQIDAVNLAFAFELTEQFSPVSLLKSYLIEARRS-SPQGRPGNASPAVQDEFNER 419

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRME 108
           +L  LK V+KC+E+H L+  +  P   +H+ I  LEK   + ++  E
Sbjct: 420 ELIGLKTVIKCIEEHSLE--EQYPVEPLHKRILQLEKAKADKKRATE 463

[Close]

BLAST of MELO3C003262T2 vs. NCBI nr
Match: gi|659069372|ref|XP_008449489.1| (PREDICTED: protein FRIGIDA [Cucumis melo])

HSP 1 Score: 671.0 bits (1730), Expect = 1.1e-189
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE
Sbjct: 347 MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 406

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEAS 120
           KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEAS
Sbjct: 407 KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEAS 466

Query: 121 TQKYLSQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDGG 180
           TQKYLSQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDGG
Sbjct: 467 TQKYLSQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDGG 526

Query: 181 RASQLGNYQIASSLRGPGLLETTVLPADIGSGITNAAASFPRGMGRGRDSNEASIYKMGP 240
           RASQLGNYQIASSLRGPGLLETTVLPADIGSGITNAAASFPRGMGRGRDSNEASIYKMGP
Sbjct: 527 RASQLGNYQIASSLRGPGLLETTVLPADIGSGITNAAASFPRGMGRGRDSNEASIYKMGP 586

Query: 241 TRELAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVDGFMGHSTSNNFDLYHFADA 300
           TRELAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVDGFMGHSTSNNFDLYHFADA
Sbjct: 587 TRELAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVDGFMGHSTSNNFDLYHFADA 646

Query: 301 AVFENDLPKNSTSQTGTLSRLRLPHNHHPPYFYN 335
           AVFENDLPKNSTSQTGTLSRLRLPHNHHPPYFYN
Sbjct: 647 AVFENDLPKNSTSQTGTLSRLRLPHNHHPPYFYN 680

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BLAST of MELO3C003262T2 vs. NCBI nr
Match: gi|449453187|ref|XP_004144340.1| (PREDICTED: protein FRIGIDA [Cucumis sativus])

HSP 1 Score: 625.2 bits (1611), Expect = 6.8e-176
Identity = 317/338 (93.79%), Postives = 326/338 (96.45%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           MTKSSKNIEAVDIIYAFGME+VFPPQEILLSFLQECDETWKKRIN+VRGSTMQLRRVSEE
Sbjct: 275 MTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVRGSTMQLRRVSEE 334

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEAS 120
           KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVEL KRMEDNASLKRKTDEAS
Sbjct: 335 KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASLKRKTDEAS 394

Query: 121 TQKYLSQEIKRSRL-ASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDG 180
           TQKYLSQEIKRSR+ A+KGGFPVMSYPVNGLLEQNA TFLEDKSCFSTSSSSMP KLLDG
Sbjct: 395 TQKYLSQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCFSTSSSSMPLKLLDG 454

Query: 181 GRASQLGNYQIASSLRGPGLLETTVLPAD-IGSGITNAAASFPRGM--GRGRDSNEASIY 240
           GRASQLGNYQIASSLRGPGL+ETTVLPAD IGSGI+NAAA FPRGM  GRGRDSNEASIY
Sbjct: 455 GRASQLGNYQIASSLRGPGLVETTVLPADIIGSGISNAAAPFPRGMGWGRGRDSNEASIY 514

Query: 241 KMGPTRELAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVDGFMGHSTSNNFDLYH 300
           KMGPTRE AYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAV GFMGHSTSNNFDLYH
Sbjct: 515 KMGPTREFAYKDISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVYGFMGHSTSNNFDLYH 574

Query: 301 FADAAVFENDLPKNSTSQTGTLSRLRLPHNHHPPYFYN 335
           FADAAVFENDLPKN ++QTGTLSRLRLPH+HHP YFYN
Sbjct: 575 FADAAVFENDLPKNRSTQTGTLSRLRLPHHHHPSYFYN 612

[Close]

BLAST of MELO3C003262T2 vs. NCBI nr
Match: gi|356518840|ref|XP_003528085.1| (PREDICTED: protein FRIGIDA-like [Glycine max])

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33
Identity = 107/305 (35.08%), Postives = 154/305 (50.49%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           M K    ++AVD+ Y FG E+ + PQ  L SFLQ+ +ETWKK   + R     L+   E+
Sbjct: 295 MMKKGMAVKAVDLAYTFGFEEKYSPQTALTSFLQKSEETWKKAKQDARDFPSALKVAHEK 354

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDE-A 120
            LA+L+ V+KCLE HK+DPVK LPGW++   I NLEKDI +  K++++ + LKRK D+  
Sbjct: 355 YLAALQSVVKCLEGHKIDPVKFLPGWQLKNKITNLEKDISDTNKKIDEKSMLKRKVDKNN 414

Query: 121 STQKYLSQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDG 180
           S+ K    E KR+R   K    V+S  +  L EQ   + ++  S +  S S+    LLDG
Sbjct: 415 SSNKMKIPEAKRARFTGKDA-SVLSPSLATLQEQRIFSRMDGNSSYDGSLSA---HLLDG 474

Query: 181 GRASQLGNYQIASSLRGPGLLETTVLPADIGSGITNAAASFPRGMGRGRDSNEASIYKMG 240
                  N  + ++     L E       +GS + + A      MG      +  +Y+  
Sbjct: 475 RSYGNYPNNYLTAASASDSLAEKY-----LGSAVASGANMLGGAMGGSFSGYQGDMYRYH 534

Query: 241 PTRELAYK-DISVGQSFIQQAMPTLATTPTPPPTTVEPYSAVDGFM---GHSTSNNFDLY 300
              E A   D SVGQSF+ Q+  TL        T+ E ++ V   +     S S   DLY
Sbjct: 535 GIGEGALSHDRSVGQSFVGQSASTL--NNLYGKTSTEGFAGVPEHLSVGASSRSGGSDLY 588

[Close]

BLAST of MELO3C003262T2 vs. NCBI nr
Match: gi|802770094|ref|XP_012090538.1| (PREDICTED: protein FRIGIDA [Jatropha curcas])

HSP 1 Score: 148.7 bits (374), Expect = 1.9e-32
Identity = 94/228 (41.23%), Postives = 128/228 (56.14%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           M      IEAVD+ Y FG+E  FPPQ++L SFL++ +E  K+R  E   S + L+  SE+
Sbjct: 340 MMNHGAKIEAVDVAYTFGVEKKFPPQKLLTSFLRDSNEALKRRKREANISPIVLKEASEK 399

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEAS 120
           ++A+LK V+K LED K DP K LPGW++ EMI  LEK+I ++ K++ D  + KRK DE  
Sbjct: 400 QVAALKTVIKLLEDRKFDPTKLLPGWQLREMIDKLEKEIGDINKKIADKVTPKRKADENE 459

Query: 121 TQKYL-SQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDG 180
               L SQE KRSR     G P++S P  GL EQ AA  ++  S F   S+S+   LLDG
Sbjct: 460 FASNLRSQETKRSRFT---GSPLISSPSIGLHEQRAAGHVDGNSLF---SASLRMNLLDG 519

Query: 181 GRASQLGNYQIASSLRGPGLLETTVLPADIGSGITNAAASFPRGMGRG 228
           G + Q  N   A  +  P       LP +   G+     S  +G G G
Sbjct: 520 GFSGQTNNPASAGPM--PYGYSVPSLP-EHAIGMVKGGGSILQGAGVG 558

[Close]

BLAST of MELO3C003262T2 vs. NCBI nr
Match: gi|225461850|ref|XP_002283789.1| (PREDICTED: protein FRIGIDA [Vitis vinifera])

HSP 1 Score: 148.3 bits (373), Expect = 2.4e-32
Identity = 110/330 (33.33%), Postives = 159/330 (48.18%), Query Frame = 1


Query: 1   MTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEE 60
           M K+  N+EAVD  Y FG+E+ FP  +IL SFL+E  E WK+   E   S ++L++ +E 
Sbjct: 288 MIKNQMNVEAVDFAYTFGLEEKFPIWKILTSFLREHKEEWKRTREE--DSPIRLKKANEN 347

Query: 61  KLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRKTDEA- 120
            L+++K V +CLEDH++DP K L GW I E I  LEK++ +L K+ME    LKRK DE  
Sbjct: 348 YLSAMKSVTRCLEDHRVDPSKLLSGWHIDEKIIQLEKEMADLDKKMEGKVMLKRKADEID 407

Query: 121 STQKYLSQEIKRSRLASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDG 180
           S +K  ++EIK S +A+          V GL EQ  A  +  +S +    S+MP   LD 
Sbjct: 408 SLKKMKTREIKHSPIAAPSS-------VIGLQEQRVADNMASRSFY---DSTMPINFLDS 467

Query: 181 GRASQLGNYQIASSL---RGPGLLETTVL------------------PADIGSGITNAAA 240
           G    +  Y  AS++    G G L   +                   P   G+G   + A
Sbjct: 468 GFPGHISTYPAASAMLHGSGGGSLPENITGTMSGSGSGTRVHGTGTGPGMAGTGGVPSMA 527

Query: 241 SFPRGMGRGRDSNEASIYK-MGP----TRELAYKDISVGQSFIQQAMPTLATTPTPPPTT 300
           SF    G         + K  GP     R++ + D  +GQSFI         +   P T+
Sbjct: 528 SFSGAHGEMLFDRTGQMMKNNGPPYAGRRDMGFNDRVIGQSFIAHPASMGVDSIFGPSTS 587

The following BLAST results are available for this feature:

BLAST of MELO3C003262T2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FRIGI_ARATH	2.5e-21	39.86	Protein FRIGIDA OS=Arabidopsis thaliana GN=FRI PE=1 SV=1	[more]

BLAST of MELO3C003262T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYX9_CUCSA	4.7e-176	93.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G437530 PE=4 SV=1	[more]
K7KVE1_SOYBN	8.9e-34	35.08	Uncharacterized protein OS=Glycine max GN=GLYMA_06G162100 PE=4 SV=1	[more]
A0A067JI55_JATCU	1.3e-32	41.23	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26334 PE=4 SV=1	[more]
E0CRY5_VITVI	1.9e-31	33.33	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00060 PE=4 SV=...	[more]
B9RA29_RICCO	9.3e-31	33.77	Protein FRIGIDA, putative OS=Ricinus communis GN=RCOM_1502940 PE=4 SV=1	[more]

BLAST of MELO3C003262T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22440.1	1.4e-06	27.27	FRIGIDA-like protein	[more]
AT5G16320.1	3.2e-06	26.25	FRIGIDA like 1	[more]
AT5G48385.1	5.4e-06	28.97	FRIGIDA-like protein	[more]

BLAST of MELO3C003262T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659069372\|ref\|XP_008449489.1\|	1.1e-189	100.00	PREDICTED: protein FRIGIDA [Cucumis melo]	[more]
gi\|449453187\|ref\|XP_004144340.1\|	6.8e-176	93.79	PREDICTED: protein FRIGIDA [Cucumis sativus]	[more]
gi\|356518840\|ref\|XP_003528085.1\|	1.3e-33	35.08	PREDICTED: protein FRIGIDA-like [Glycine max]	[more]
gi\|802770094\|ref\|XP_012090538.1\|	1.9e-32	41.23	PREDICTED: protein FRIGIDA [Jatropha curcas]	[more]
gi\|225461850\|ref\|XP_002283789.1\|	2.4e-32	33.33	PREDICTED: protein FRIGIDA [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR012474	Frigida

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C003262	MELO3C003262	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C003262T2	MELO3C003262T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C003262T2.cds2	MELO3C003262T2.cds2	CDS
MELO3C003262T2.cds1	MELO3C003262T2.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012474	Frigida-like	PFAM	PF07899	Frigida	coord: 1..106 score: 5.3
None	No IPR available	unknown	Coil	Coil	coord: 92..112 scor
None	No IPR available	PANTHER	PTHR31791	FAMILY NOT NAMED	coord: 1..138 score: 1.0
None	No IPR available	PANTHER	PTHR31791:SF3	SUBFAMILY NOT NAMED	coord: 1..138 score: 1.0