MELO3C002363T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C002363T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Coiled-coil domain-containing 84
Location	chr12 : 23409431 .. 23411670 (-)
Sequence length	870

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTGCTAATGGTCAATCCAGTGGTCAGGGGGTAAGTTTGGTTATTCTCTTCTACTGGAGAAGTGGAGTTCTGTATTTACTATGAAGTAGCGCTGTTTTTGTACTAGAACGCCTTCCACTTTTTTTTTTTATTTGGTATGGAGGCGGTGGCAGCTGGTGGGGCTTCCTTTAACTGAAGAGTGTGTGTGGGAATTACTACTGCTATTACTGTTATTTTAAATTTCTCTTCTCAGTTCTTGATCTTGTCAATTTCACGTGTCAACAAACATTTATAGAAGCCTGCAGGTTTCATTGAATGGGGTGGCATGACATCCTGTTATTGTAATAAATGTAGCTCTGACAATCAACTCTTTGTTGCTAGATAACATCTTCGTACTCCAGTTGAAATTATATCTTGTCTTTCTTCACGAGTATGTTACTTTTTCATAATGCATAATTATTTTATTGACATTTCTAGTAAATGCATAACCTACTTGATATAGATGTACGGGACGCATCAGAATGAAACAACTGCGAACAAAGAAAGCCATCCTGAGGGTATGAAATTTTGTGAAATTGTATTCTCGTTGTAATGTTACTCAACTCTTTCACATAGTCTTGATATTTATTAATAATTCTAAAAGGAAAAATTAGAAACTATCGAAATTAACCTAATTTGATACTGTGAATATATCTTCGTTTAAATTCTGAACTGTATAGTAGTGATGTGTTTTCCATCTATTTGCTATATCTCTTTAGGTTTTCAGACCCTCACTCGGATTTCTAGTATTGTTACTGGAGATTCTGGAGGAAATGTTCATTCTGGGATGTTGCCTCCTTGGCTTGAAAAGCCTGAAGATAGTGGGTTTAATGTTCAAATAAGACCAATGGTCAGAGGTGGTGTTTTTTCTTTGAAGGAATCTGCAAAGTCCAAAAAACTGAATCCCAAACGGGTAGGAGCTGCATGGGCAGAAAAAAGAAAGATGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGATGACAAGAATTGGCTTCCTAATTTTGGCAGGGTATGGCAATCTGGTAGCCGTAAAGAATCTAGAAAAGAATTTGAGAAGGAGAAATCAAAATTGCTGATGGTCGAAAATTCACCTGAAACAAATGTCAATATTCAGCCGTACATTAGCAAACGGATGGTCAGCCCCATTTTCATCATATTTAATGCAGTTTTGATGTTTCAATTTATATCTACCATTATGAAACATCTTTTGTTCTACTGTTAAAATCTCCTTCATATATATATATTTATTTATGTATTTATATATTTTGCTTATAAAATGCTATTTTACCATGTATTTCCCAACTGGACCTAGTTTTGCTGATAAGGTAGTGGGAACTGGGAAGTTCCAATACGTGACAATATTTTAAAGGTGATGTTTTGAGCACTCTATGTTCTACGTATTTCCATCGAGTAGTTATACATTTGAAATCTGTGTAAAATTTTTAATACAAAGGTGTCCTAGGATTTTGTCCAGTCAGCTTCTTTATATCTCTCTGCTTTTCTTGAGACTAAAATGGTGACTAGAGGAAGAAAGCAAGAGAATACCTAAAAAGTGGTTTTTTCCCCAATATAATTAATCATTACATTTCTACACAAGAAGGAATACATACACTTTAAAAAAAAAAAGAAAAGAAAAAGGTGGTTGAATGATTAGAAAATGGGGAGCACAGGTTCTGAACTACTCCCTTCCTGTATCTTGAATACCTCTGGTTTTTTCTGCATGCGGCTTTTTAATTGGTGCCATTTTGTGGATTACGTGTTTCATTATCCCCTCTCTCTCTCTCTCGTTTTTTGTTTTTATAGTTAGAGTGACTTGGATTGCTTTCTAGACTGATTTATCTTTGTTCTTGCAGCGAAGAGACCAGGAGAACAAGGAAGATGCTGCCAATTACACGAGTGTATAAGACAACGATTCTCCAAAACTTCTCATCTAGAGAATTATTGTACATGGACAATCCTTTTGAAAGATCAGTTTGGAAAGAGAATTAGGCTTGGAGTTTGATAGGAAATTTTAAAGGCTGACCGATTTGCCACCTCTTCATTACTTTATTCACAATCGTTCAAATTTGTTGTAGTAAACATGACATTAATTTTCTTTAAGATGTCGGCTAAAAGAATTTTTTGAGATATCAGTGGTAATTGAGAACAGGATTTCCTTGACGAACATTGCCCAGGATTAACTACCGTTGGGCCACTCTGCGTATTGGAA

mRNA sequence

CACTGCTAATGGTCAATCCAGTGGTCAGGGGATGTACGGGACGCATCAGAATGAAACAACTGCGAACAAAGAAAGCCATCCTGAGGGTTTTCAGACCCTCACTCGGATTTCTAGTATTGTTACTGGAGATTCTGGAGGAAATGTTCATTCTGGGATGTTGCCTCCTTGGCTTGAAAAGCCTGAAGATAGTGGGTTTAATGTTCAAATAAGACCAATGGTCAGAGGTGGTGTTTTTTCTTTGAAGGAATCTGCAAAGTCCAAAAAACTGAATCCCAAACGGGTAGGAGCTGCATGGGCAGAAAAAAGAAAGATGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGATGACAAGAATTGGCTTCCTAATTTTGGCAGGGTATGGCAATCTGGTAGCCGTAAAGAATCTAGAAAAGAATTTGAGAAGGAGAAATCAAAATTGCTGATGGTCGAAAATTCACCTGAAACAAATGTCAATATTCAGCCGTACATTAGCAAACGGATGCGAAGAGACCAGGAGAACAAGGAAGATGCTGCCAATTACACGAGTGTATAAGACAACGATTCTCCAAAACTTCTCATCTAGAGAATTATTGTACATGGACAATCCTTTTGAAAGATCAGTTTGGAAAGAGAATTAGGCTTGGAGTTTGATAGGAAATTTTAAAGGCTGACCGATTTGCCACCTCTTCATTACTTTATTCACAATCGTTCAAATTTGTTGTAGTAAACATGACATTAATTTTCTTTAAGATGTCGGCTAAAAGAATTTTTTGAGATATCAGTGGTAATTGAGAACAGGATTTCCTTGACGAACATTGCCCAGGATTAACTACCGTTGGGCCACTCTGCGTATTGGAA

Coding sequence (CDS)

ATGTACGGGACGCATCAGAATGAAACAACTGCGAACAAAGAAAGCCATCCTGAGGGTTTTCAGACCCTCACTCGGATTTCTAGTATTGTTACTGGAGATTCTGGAGGAAATGTTCATTCTGGGATGTTGCCTCCTTGGCTTGAAAAGCCTGAAGATAGTGGGTTTAATGTTCAAATAAGACCAATGGTCAGAGGTGGTGTTTTTTCTTTGAAGGAATCTGCAAAGTCCAAAAAACTGAATCCCAAACGGGTAGGAGCTGCATGGGCAGAAAAAAGAAAGATGGAGCTGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGATGACAAGAATTGGCTTCCTAATTTTGGCAGGGTATGGCAATCTGGTAGCCGTAAAGAATCTAGAAAAGAATTTGAGAAGGAGAAATCAAAATTGCTGATGGTCGAAAATTCACCTGAAACAAATGTCAATATTCAGCCGTACATTAGCAAACGGATGCGAAGAGACCAGGAGAACAAGGAAGATGCTGCCAATTACACGAGTGTATAA

Protein sequence

MCFPSICYISLGFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKKLNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKSKLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV*

Homology

[Close]

BLAST of MELO3C002363T2 vs. Swiss-Prot
Match: TTL_ARATH (TITAN-like protein OS=Arabidopsis thaliana GN=TTL PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-37
Identity = 84/148 (56.76%), Postives = 102/148 (68.92%), Query Frame = 1


Query: 12  GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 71
           G   +T ISS  + D+GGNVHSG  PPWL+  +    +VQ+        F  K   K++K
Sbjct: 272 GVVGMTSISSSHSTDAGGNVHSGAPPPWLDANDGDFSSVQLNQSDVAR-FQAKVPGKNRK 331

Query: 72  LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 131
           LNP RVGAAWAE+RK+E+EMEK G + +S  D +WLPNFGRVWQSG+RKESRKEFEKEK 
Sbjct: 332 LNPNRVGAAWAERRKIEIEMEKSGHVTKSNIDPDWLPNFGRVWQSGTRKESRKEFEKEKR 391

Query: 132 KLLMVEN-SPETN-VNIQPYISKRMRRD 158
           KL+  E+ S E+  V IQPYISKR RR+
Sbjct: 392 KLVKTESISTESEPVKIQPYISKRARRE 418

[Close]

BLAST of MELO3C002363T2 vs. Swiss-Prot
Match: CCD84_MOUSE (Coiled-coil domain-containing protein 84 OS=Mus musculus GN=Ccdc84 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-09
Identity = 38/102 (37.25%), Postives = 48/102 (47.06%), Query Frame = 1


Query: 29  GNVHSGMLPPWL-EKPEDSGFNVQIRPMVRGGVFSLKESAKSKKLNPKRVGAAWAEKRKM 88
           GN+HSG  PPW+ ++ E S  ++ I P         KE  K KKL P RVGA +      
Sbjct: 234 GNIHSGATPPWMIQEEEHSSGSLPIGPSYEE-FLKEKEKQKLKKLPPDRVGANFDHS--- 293

Query: 89  ELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKE 130
                       S     WLP+FGRVW +G R +SR +F+ E
Sbjct: 294 ------------SNTSAGWLPSFGRVWNNGRRWQSRHQFKTE 319

[Close]

BLAST of MELO3C002363T2 vs. Swiss-Prot
Match: CCD84_HUMAN (Coiled-coil domain-containing protein 84 OS=Homo sapiens GN=CCDC84 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 38/106 (35.85%), Postives = 49/106 (46.23%), Query Frame = 1


Query: 29  GNVHSGMLPPWLEKPEDS-GFNVQIRPMVRGGVFSLKESAKSKKLNPKRVGAAWAEKRKM 88
           GN+HSG  PPW+ + E+    N +I P         KE  K KKL P RVGA +      
Sbjct: 234 GNIHSGATPPWMIQDEEYIAGNQEIGPSYEE-FLKEKEKQKLKKLPPDRVGANFDHS--- 293

Query: 89  ELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKSKL 134
                       S     WLP+FGRVW +G R +SR +F+ E + +
Sbjct: 294 ------------SRTSAGWLPSFGRVWNNGRRWQSRHQFKTEAAAM 323

[Close]

BLAST of MELO3C002363T2 vs. TrEMBL
Match: A0A0A0LUE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050510 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 4.7e-79
Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 1


Query: 12  GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 71
           GFQTLTRIS+IV+GDSGGN++SGMLPPWLEKPEDSGFNVQIRPMV GGV SLKESAKS K
Sbjct: 283 GFQTLTRISNIVSGDSGGNINSGMLPPWLEKPEDSGFNVQIRPMVGGGVSSLKESAKSNK 342

Query: 72  LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 131
           LNPKRVGAAWAEKRK ELEMEKRGEIVQSY DKNWLPNFGRVWQSGSRKESRKEFEKEKS
Sbjct: 343 LNPKRVGAAWAEKRKRELEMEKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKS 402

Query: 132 KLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV 171
           KLLMVENSPETNVNIQPYISKRMRRDQEN+EDAAN+TSV
Sbjct: 403 KLLMVENSPETNVNIQPYISKRMRRDQENEEDAANHTSV 441

[Close]

BLAST of MELO3C002363T2 vs. TrEMBL
Match: A0A0B0Q3P2_GOSAR (Coiled-coil domain-containing 84 OS=Gossypium arboreum GN=F383_15746 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-48
Identity = 102/148 (68.92%), Postives = 116/148 (78.38%), Query Frame = 1


Query: 10  SLGFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKS 69
           S G Q+LT++SSI T D+GGNVHSG LPPWLE  + +  N Q++P +R  + S K S KS
Sbjct: 323 SQGLQSLTQVSSISTIDAGGNVHSGALPPWLEAADQTLLNNQVKPALRSFISSNK-SQKS 382

Query: 70  KKLNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKE 129
            KLNPKRVGAAWAEKRKMELE EKRGEIV+S  D NWLPNFGRVWQSGSRKESRKEF+ E
Sbjct: 383 HKLNPKRVGAAWAEKRKMELEKEKRGEIVESDCDANWLPNFGRVWQSGSRKESRKEFDIE 442

Query: 130 KSKLLMVENSPETNVNIQPYISKRMRRD 158
           K K L VE+  E  V IQPYISKRMR+D
Sbjct: 443 KHKFLKVESHSEMPVKIQPYISKRMRKD 469

[Close]

BLAST of MELO3C002363T2 vs. TrEMBL
Match: A0A0D2PT80_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G058800 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-47
Identity = 101/148 (68.24%), Postives = 116/148 (78.38%), Query Frame = 1


Query: 10  SLGFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKS 69
           S G Q+LT++SSI T D+GGNVHSG LPPWLE  + +  N Q++P +   + S K S KS
Sbjct: 302 SQGLQSLTQVSSISTIDAGGNVHSGALPPWLEAADQTLLNNQVKPALSSFISSNK-SQKS 361

Query: 70  KKLNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKE 129
           +KLNPKRVGAAWAEKRKMELE EKRGEIV+S  D NWLPNFGRVWQSGSRKESRKEF+ E
Sbjct: 362 RKLNPKRVGAAWAEKRKMELEKEKRGEIVESDCDANWLPNFGRVWQSGSRKESRKEFDIE 421

Query: 130 KSKLLMVENSPETNVNIQPYISKRMRRD 158
           K K L VE+  E  V IQPYISKRMR+D
Sbjct: 422 KHKFLKVESHSEMPVKIQPYISKRMRKD 448

[Close]

BLAST of MELO3C002363T2 vs. TrEMBL
Match: G7J3W4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g099220 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.1e-43
Identity = 92/146 (63.01%), Postives = 107/146 (73.29%), Query Frame = 1


Query: 12  GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 71
           G Q LTRIS +   + GGNVHSG  PPW E  E  G  +  +P++   V    +S K KK
Sbjct: 293 GIQMLTRISFVPAENGGGNVHSGAPPPWFETTE--GVQMHPKPVLGDLVSHSNKSGKHKK 352

Query: 72  LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 131
           LNPKRVGAAWAEKRK+E+EMEKRGEIV++  D NWLPNFGRVWQSGSR+ESRKEFEKEK 
Sbjct: 353 LNPKRVGAAWAEKRKIEMEMEKRGEIVRNECDANWLPNFGRVWQSGSRRESRKEFEKEKQ 412

Query: 132 KLLMVENSPETNVNIQPYISKRMRRD 158
           +L  VE  PE  + IQPY+SKRMR D
Sbjct: 413 ELSNVEAQPEMPIKIQPYVSKRMRMD 436

[Close]

BLAST of MELO3C002363T2 vs. TrEMBL
Match: A0A061FZZ2_THECC (Coiled-coil domain-containing protein 84, putative isoform 1 OS=Theobroma cacao GN=TCM_014646 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42
Identity = 95/148 (64.19%), Postives = 109/148 (73.65%), Query Frame = 1


Query: 10  SLGFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKS 69
           S G  +LT ++S+ T D+GGNVHSG  PPW E  +++      +P +   + S K S KS
Sbjct: 365 SQGLLSLTEVASLSTVDAGGNVHSGAPPPWFEATDEA------KPALSSFISSNK-SQKS 424

Query: 70  KKLNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKE 129
            KLNPKRVGAAWAEKRKMELE EKRGEIV+S  D NWLPNFGRVWQSGSRKESRKEFE E
Sbjct: 425 SKLNPKRVGAAWAEKRKMELEKEKRGEIVKSDCDANWLPNFGRVWQSGSRKESRKEFEIE 484

Query: 130 KSKLLMVENSPETNVNIQPYISKRMRRD 158
           K K L VE+  E  + IQPYISKRMRRD
Sbjct: 485 KQKFLKVESHSEMPIKIQPYISKRMRRD 505

[Close]

BLAST of MELO3C002363T2 vs. TAIR10
Match: AT4G24900.1 (AT4G24900.1 unknown protein)

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-38
Identity = 84/148 (56.76%), Postives = 102/148 (68.92%), Query Frame = 1


Query: 12  GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 71
           G   +T ISS  + D+GGNVHSG  PPWL+  +    +VQ+        F  K   K++K
Sbjct: 272 GVVGMTSISSSHSTDAGGNVHSGAPPPWLDANDGDFSSVQLNQSDVAR-FQAKVPGKNRK 331

Query: 72  LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 131
           LNP RVGAAWAE+RK+E+EMEK G + +S  D +WLPNFGRVWQSG+RKESRKEFEKEK 
Sbjct: 332 LNPNRVGAAWAERRKIEIEMEKSGHVTKSNIDPDWLPNFGRVWQSGTRKESRKEFEKEKR 391

Query: 132 KLLMVEN-SPETN-VNIQPYISKRMRRD 158
           KL+  E+ S E+  V IQPYISKR RR+
Sbjct: 392 KLVKTESISTESEPVKIQPYISKRARRE 418

[Close]

BLAST of MELO3C002363T2 vs. NCBI nr
Match: gi|659067497|ref|XP_008439729.1| (PREDICTED: TITAN-like protein isoform X1 [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 12  GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 71
           GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK
Sbjct: 280 GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 339

Query: 72  LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 131
           LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS
Sbjct: 340 LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 399

Query: 132 KLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV 171
           KLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV
Sbjct: 400 KLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV 438

[Close]

BLAST of MELO3C002363T2 vs. NCBI nr
Match: gi|659067515|ref|XP_008439800.1| (PREDICTED: TITAN-like protein isoform X2 [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 12  GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 71
           GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK
Sbjct: 279 GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 338

Query: 72  LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 131
           LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS
Sbjct: 339 LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 398

Query: 132 KLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV 171
           KLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV
Sbjct: 399 KLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV 437

[Close]

BLAST of MELO3C002363T2 vs. NCBI nr
Match: gi|778658146|ref|XP_011652166.1| (PREDICTED: TITAN-like protein isoform X2 [Cucumis sativus])

HSP 1 Score: 302.0 bits (772), Expect = 6.7e-79
Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 1


Query: 12  GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 71
           GFQTLTRIS+IV+GDSGGN++SGMLPPWLEKPEDSGFNVQIRPMV GGV SLKESAKS K
Sbjct: 282 GFQTLTRISNIVSGDSGGNINSGMLPPWLEKPEDSGFNVQIRPMVGGGVSSLKESAKSNK 341

Query: 72  LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 131
           LNPKRVGAAWAEKRK ELEMEKRGEIVQSY DKNWLPNFGRVWQSGSRKESRKEFEKEKS
Sbjct: 342 LNPKRVGAAWAEKRKRELEMEKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKS 401

Query: 132 KLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV 171
           KLLMVENSPETNVNIQPYISKRMRRDQEN+EDAAN+TSV
Sbjct: 402 KLLMVENSPETNVNIQPYISKRMRRDQENEEDAANHTSV 440

[Close]

BLAST of MELO3C002363T2 vs. NCBI nr
Match: gi|778658133|ref|XP_011652145.1| (PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus])

HSP 1 Score: 302.0 bits (772), Expect = 6.7e-79
Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 1


Query: 12  GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 71
           GFQTLTRIS+IV+GDSGGN++SGMLPPWLEKPEDSGFNVQIRPMV GGV SLKESAKS K
Sbjct: 283 GFQTLTRISNIVSGDSGGNINSGMLPPWLEKPEDSGFNVQIRPMVGGGVSSLKESAKSNK 342

Query: 72  LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 131
           LNPKRVGAAWAEKRK ELEMEKRGEIVQSY DKNWLPNFGRVWQSGSRKESRKEFEKEKS
Sbjct: 343 LNPKRVGAAWAEKRKRELEMEKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKS 402

Query: 132 KLLMVENSPETNVNIQPYISKRMRRDQENKEDAANYTSV 171
           KLLMVENSPETNVNIQPYISKRMRRDQEN+EDAAN+TSV
Sbjct: 403 KLLMVENSPETNVNIQPYISKRMRRDQENEEDAANHTSV 441

[Close]

BLAST of MELO3C002363T2 vs. NCBI nr
Match: gi|778658149|ref|XP_011652172.1| (PREDICTED: TITAN-like protein isoform X3 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 2.0e-70
Identity = 134/143 (93.71%), Postives = 138/143 (96.50%), Query Frame = 1


Query: 12  GFQTLTRISSIVTGDSGGNVHSGMLPPWLEKPEDSGFNVQIRPMVRGGVFSLKESAKSKK 71
           GFQTLTRIS+IV+GDSGGN++SGMLPPWLEKPEDSGFNVQIRPMV GGV SLKESAKS K
Sbjct: 283 GFQTLTRISNIVSGDSGGNINSGMLPPWLEKPEDSGFNVQIRPMVGGGVSSLKESAKSNK 342

Query: 72  LNPKRVGAAWAEKRKMELEMEKRGEIVQSYDDKNWLPNFGRVWQSGSRKESRKEFEKEKS 131
           LNPKRVGAAWAEKRK ELEMEKRGEIVQSY DKNWLPNFGRVWQSGSRKESRKEFEKEKS
Sbjct: 343 LNPKRVGAAWAEKRKRELEMEKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKS 402

Query: 132 KLLMVENSPETNVNIQPYISKRM 155
           KLLMVENSPETNVNIQPYISKRM
Sbjct: 403 KLLMVENSPETNVNIQPYISKRM 425

The following BLAST results are available for this feature:

BLAST of MELO3C002363T2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TTL_ARATH	2.2e-37	56.76	TITAN-like protein OS=Arabidopsis thaliana GN=TTL PE=2 SV=1	[more]
CCD84_MOUSE	7.3e-09	37.25	Coiled-coil domain-containing protein 84 OS=Mus musculus GN=Ccdc84 PE=2 SV=1	[more]
CCD84_HUMAN	1.2e-08	35.85	Coiled-coil domain-containing protein 84 OS=Homo sapiens GN=CCDC84 PE=2 SV=1	[more]

BLAST of MELO3C002363T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUE2_CUCSA	4.7e-79	93.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050510 PE=4 SV=1	[more]
A0A0B0Q3P2_GOSAR	7.3e-48	68.92	Coiled-coil domain-containing 84 OS=Gossypium arboreum GN=F383_15746 PE=4 SV=1	[more]
A0A0D2PT80_GOSRA	1.6e-47	68.24	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G058800 PE=4 SV=1	[more]
G7J3W4_MEDTR	4.1e-43	63.01	Uncharacterized protein OS=Medicago truncatula GN=MTR_3g099220 PE=4 SV=1	[more]
A0A061FZZ2_THECC	1.2e-42	64.19	Coiled-coil domain-containing protein 84, putative isoform 1 OS=Theobroma cacao ...	[more]

BLAST of MELO3C002363T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24900.1	1.2e-38	56.76	unknown protein	[more]

BLAST of MELO3C002363T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067497\|ref\|XP_008439729.1\|	1.6e-85	100.00	PREDICTED: TITAN-like protein isoform X1 [Cucumis melo]	[more]
gi\|659067515\|ref\|XP_008439800.1\|	1.6e-85	100.00	PREDICTED: TITAN-like protein isoform X2 [Cucumis melo]	[more]
gi\|778658146\|ref\|XP_011652166.1\|	6.7e-79	93.08	PREDICTED: TITAN-like protein isoform X2 [Cucumis sativus]	[more]
gi\|778658133\|ref\|XP_011652145.1\|	6.7e-79	93.08	PREDICTED: TITAN-like protein isoform X1 [Cucumis sativus]	[more]
gi\|778658149\|ref\|XP_011652172.1\|	2.0e-70	93.71	PREDICTED: TITAN-like protein isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR028015	CCDC84

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048316	seed development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C002363	MELO3C002363	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C002363T2	MELO3C002363T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C002363T2.cds3	MELO3C002363T2.cds3	CDS
MELO3C002363T2.cds2	MELO3C002363T2.cds2	CDS
MELO3C002363T2.cds1	MELO3C002363T2.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028015	Coiled-coil domain-containing protein 84	PFAM	PF14968	CCDC84	coord: 20..132 score: 3.3
None	No IPR available	PANTHER	PTHR31198	FAMILY NOT NAMED	coord: 13..162 score: 1.8