Lsi10G012230.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G012230.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	BHLH transcription factor
Location	chr10 : 16514396 .. 16517564 (-)
Sequence length	1247

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAATTGGAAAGTTTCATATACTAAACTTATATTTAAACTCTTTTTTTTTTAATTATAAAGCATAACATGTCATGATTCTCCCATTTATTTACTTTTTTTTCTTCTCCATATAGATTCCTTTCTTTCCCCTGTTTATAAATTAGCCCATTAATCACTTTATCTTGATCCATCAAATCAATTTACAGATAAAGTTATTTGAGATGGAGCAAATCGTGGGGCATTTAATGACCAACATCAACGATCAATTTGAGCTCCAAGATTTCATCCATGGCGACAACTTGGATCAATATGTGAATCTAATTCGTGGAGGGAACGAAAATCCGCTATTCAATAACTTCGATCTTGATTTCATGAACGGTTGCTTGGTGGAGAATGGTGTGGATCCAAGCCCTGAATTCATTTTAGATTCGAATATGGTGATGAATAATTCTGATCCCAATTCATTGTTTAGTACATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAAATGAAGATGAAGACGAAGATGACACAGCTTCTGTAGAGAATTCTTCATTCACAAATTCAAAGAAACCTAAGGTCGATCGATCAAGAACTTTGATTTCTGAACGAAGGAGAAGAGGAAGAATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGGTATTACTACTTTAGTTACTCTGTGTTTGTTTCATTTTTTTTTAAATAAACATTAGAAGAACTTAAAAAATTACGTCACGAGACAAAGTAAAGAAAATCACTCCGGATAAAGAGAGAAAAAGAGATGAAACTCTCTCTTCTAAAGTCTTTCCCGCCATAACTTTGTTTTATTTTGATCCTTATATTTTCAAAAGATTCATTTTTATTAGAGATGTTAATTATCATCACATTCCCATTTGGCTTTGATTGACTCTTTTTTAATTTATTGTAATAAATTTTCAAATTTTATTATCTAATGGCCTAATCTAATAGATATGTTTGAATCGAACATTTAAATTTAGATTATATATATATATATGAATAATTTGATAGGTAAATTACTATAAACAAAAAATATCAAACTATTTATAAATATATAAATTTTTTACTATCTATTAGTGCTGATGGATAGTAAAATTTTTATATATTTATAAATAGTTTGACTCATTTTCTATATTTGAAAACAACCATTTTTTTTCAATTATGAATTAAAATTTTCTATCTATCAGTGTTATTTTTTTTTTTTTTTTAACAAACAAGCAGAGAAAATTTTCTTAGGGAACACGATCTCCACAAAATTAAATAGAGAGTTTTGTGGAGATGGGGAATGAAATAGGATTTCGGCTCCGCTCCGTGTACGTCTCTAATTTTGATTCTTGTGACCTCAAATTTAGTTTATTTTATTTTTATACTTTTAAAATATTCATTTGAGTCAATGTACATTTTAAAAGACCATAATCCATTTCTATAAAAATTAAAGATCAAAATAGACCTTTAAAAAAAAGAAACAAGGATCTAAATGAACCAAATTACACTAATCAAAATAAAAGAGAATCAAAACCGATATAAACCTCCATAATACTCGTAATAAATGATTTTAAAATAGTTAAAATGATTGCTATCTTCTTCAAACTTACTTTGATGATGTGGAAAAATTGCAGATGGACAAGGCTTCCATTGTTGGGGATGCAGTGTTACATGTGAAGGAGCTACAAATGCAAGCCAAGAAACTCAAAGCAGAGATATCAGTTTTGGAATCTTCAATCAATGAAACACAAATGAATCATAGAGATCAAAACCAAAAGAAGATTAATCAAACTTCATATTCCAACCAATTCTTCCCCACCAAAATAATTCAGGTACATTTTTCAAGTTGTAAGACAAAATTTGATTATGTTCTGTAATAAAGTTTTTTAAAGCTAATTAATTTGGGGATTTTTTTCTTTCCTTTTTAAAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGTTAGTCTGCAAGATGGGTGAAAGAGTAGCAATGTCTCTTTACAAAGTTCTTGAATCCCTCACCACCTTCATTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGATAGATTCATTCTCACTGCTACAATTAATGTAATTAATTACTTTCTTATAATCTGAATTCAAATAATTGAGCCGGTTTGAAATGACTTTTCTTAAAAAAATAGTTTATGAACACTTGAAAAGTCATTCTAAACGGACTCTTTAAACCAAATCTGAAGCTTATAATCTGTTTATTTTGTAGGTGAGAGATTGTGAAGTGGACATGAACTTGCCAAATTTGAAGCTTTGGCTTACTGGGGCACTTCTTAACCATGGATTTGAGTTTTAATCACATCTTAATCAGCTCTCTATTTTTCTTTTTCTGTTTAACCCTTTAAAACCAATACAGAGATTGTAAACCTCCTCCTCTTAAAAGATGTATTTTCTTAGAGATTTAACTTGTTAAATAATAAACTTTGTATTGTAAGGCCATTTGAACTTTGAAATCGGCAACTATTGTACATTTTAATTGTGCCACAGAAAAATATAAGACGTTGAAGATTCAATTTCTACTCTCACAATTGTTGAATTAAAAAAATATTGCCTACATATACTTGATTTTGTATAAAGTACTCCAACATACAAGTCAAATAAAAGCTACACAAATCTAAACTTCCCAATATAAAAACTTCAGGAGTAAAAGAGAACACTTCATATGAACATCTTGTTCGAAATATACCATAGTCCGAGTTGTTTTCGTTTAATTTGAACTTGCATATACAATATGCAGTGAGGGTAAAAATACTGGCCAACAGCATGGGGGAGTTTTCGAGGAACAGGGTGCACGGTTGTGTTTGTTCGGGAATGGAAATGCATTATTTGGGAGGAGGAATCAGCAGCAGTAGAGAATGGTTCAGCTTTAGAAACAGCTTTTAAGGTTGTTCAGTTCTGTCACAACTCACAAGGAAGTAAAAATAATGACGATCAGCTCATCTGCAACATGGAAAACCAATCTTTACCAGTTCAAGAATTGGATAATCCATCGGTGAAATTTATCCCACATGTCCGATTCCCTCTTTGCTACTGTCAAGGATCAACTGTCAAGACTCTGGTAACAGTAGATCGATGGATCAATACAAAATCCTCCCCTGCAATTGAACCATGA

mRNA sequence

CTCAAATTGGAAAGTTTCATATACTAAACTTATATTTAAACTCTTTTTTTTTTAATTATAAAGCATAACATGTCATGATTCTCCCATTTATTTACTTTTTTTTCTTCTCCATATAGATTCCTTTCTTTCCCCTGTTTATAAATTAGCCCATTAATCACTTTATCTTGATCCATCAAATCAATTTACAGATAAAGTTATTTGAGATGGAGCAAATCGTGGGGCATTTAATGACCAACATCAACGATCAATTTGAGCTCCAAGATTTCATCCATGGCGACAACTTGGATCAATATGTGAATCTAATTCGTGGAGGGAACGAAAATCCGCTATTCAATAACTTCGATCTTGATTTCATGAACGGTTGCTTGGTGGAGAATGGTGTGGATCCAAGCCCTGAATTCATTTTAGATTCGAATATGGTGATGAATAATTCTGATCCCAATTCATTGTTTAGTACATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAAATGAAGATGAAGACGAAGATGACACAGCTTCTGTAGAGAATTCTTCATTCACAAATTCAAAGAAACCTAAGGTCGATCGATCAAGAACTTTGATTTCTGAACGAAGGAGAAGAGGAAGAATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGATGGACAAGGCTTCCATTGTTGGGGATGCAGTGTTACATGTGAAGGAGCTACAAATGCAAGCCAAGAAACTCAAAGCAGAGATATCAGTTTTGGAATCTTCAATCAATGAAACACAAATGAATCATAGAGATCAAAACCAAAAGAAGATTAATCAAACTTCATATTCCAACCAATTCTTCCCCACCAAAATAATTCAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGTTAGTCTGCAAGATGGGGTGCACGGTTGTGTTTGTTCGGGAATGGAAATGCATTATTTGGGAGGAGGAATCAGCAGCAGTAGAGAATGGTTCAGCTTTAGAAACAGCTTTTAAGGTTGTTCAGTTCTGTCACAACTCACAAGGAAGTAAAAATAATGACGATCAGCTCATCTGCAACATGGAAAACCAATCTTTACCAGTTCAAGAATTGGATAATCCATCGGTGAAATTTATCCCACATGTCCGATTCCCTCTTTGCTACTGTCAAGGATCAACTGTCAAGACTCTGGTAACAGTAGATCGATGGATCAATACAAAATCCTCCCCTGCAATTGAACCATGA

Coding sequence (CDS)

ATGGAGCAAATCGTGGGGCATTTAATGACCAACATCAACGATCAATTTGAGCTCCAAGATTTCATCCATGGCGACAACTTGGATCAATATGTGAATCTAATTCGTGGAGGGAACGAAAATCCGCTATTCAATAACTTCGATCTTGATTTCATGAACGGTTGCTTGGTGGAGAATGGTGTGGATCCAAGCCCTGAATTCATTTTAGATTCGAATATGGTGATGAATAATTCTGATCCCAATTCATTGTTTAGTACATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAAATGAAGATGAAGACGAAGATGACACAGCTTCTGTAGAGAATTCTTCATTCACAAATTCAAAGAAACCTAAGGTCGATCGATCAAGAACTTTGATTTCTGAACGAAGGAGAAGAGGAAGAATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGATGGACAAGGCTTCCATTGTTGGGGATGCAGTGTTACATGTGAAGGAGCTACAAATGCAAGCCAAGAAACTCAAAGCAGAGATATCAGTTTTGGAATCTTCAATCAATGAAACACAAATGAATCATAGAGATCAAAACCAAAAGAAGATTAATCAAACTTCATATTCCAACCAATTCTTCCCCACCAAAATAATTCAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGTTAGTCTGCAAGATGGGGTGCACGGTTGTGTTTGTTCGGGAATGGAAATGCATTATTTGGGAGGAGGAATCAGCAGCAGTAGAGAATGGTTCAGCTTTAGAAACAGCTTTTAAGGTTGTTCAGTTCTGTCACAACTCACAAGGAAGTAAAAATAATGACGATCAGCTCATCTGCAACATGGAAAACCAATCTTTACCAGTTCAAGAATTGGATAATCCATCGGTGAAATTTATCCCACATGTCCGATTCCCTCTTTGCTACTGTCAAGGATCAACTGTCAAGACTCTGGTAACAGTAGATCGATGGATCAATACAAAATCCTCCCCTGCAATTGAACCATGA

Protein sequence

MEQIVGHLMTNINDQFELQDFIHGDNLDQYVNLIRGGNENPLFNNFDLDFMNGCLVENGVDPSPEFILDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDEDEDDTASVENSSFTNSKKPKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKAEISVLESSINETQMNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVCKMGCTVVFVREWKCIIWEEESAAVENGSALETAFKVVQFCHNSQGSKNNDDQLICNMENQSLPVQELDNPSVKFIPHVRFPLCYCQGSTVKTLVTVDRWINTKSSPAIEP

Homology

[Close]

BLAST of Lsi10G012230.1 vs. Swiss-Prot
Match: FIT_ARATH (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-39
Identity = 116/242 (47.93%), Postives = 156/242 (64.46%), Query Frame = 1


Query: 9   MTNINDQFELQDFIHGDNLDQYVNLIRGGN----ENPLFNNFDLDFMNG--CLV-ENGVD 68
           ++NIND  EL +F+   N DQ++NLIRG +    ENP+ + FDL  +    C + EN   
Sbjct: 8   LSNIND-LELHNFLVDPNFDQFINLIRGDHQTIDENPVLD-FDLGPLQNSPCFIDENQFI 67

Query: 69  PSPEFILDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDED--EDDTASVENSSFTNSKK 128
           P+P   L   +   +S+    F + +  +S+    E ++ED  + D +S   ++   ++K
Sbjct: 68  PTPVDDLFDELPDLDSNVAESFRSFDG-DSVRAGGEEDEEDYNDGDDSSATTTNNDGTRK 127

Query: 129 PKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLK 188
            K DRSRTLISERRRRGRMK+KLYALRSLVPNITKMDKASIVGDAVL+V+ELQ QAKKLK
Sbjct: 128 TKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLK 187

Query: 189 AEISVLESSINET-QMNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVCK 241
           ++I+ LE+S+N T        + +K       N     KIIQ+DV QVEE+GFY+RLVC 
Sbjct: 188 SDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFYVRLVCN 246

[Close]

BLAST of Lsi10G012230.1 vs. Swiss-Prot
Match: AMS_ARATH (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 8.4e-12
Identity = 59/199 (29.65%), Postives = 103/199 (51.76%), Query Frame = 1


Query: 64  PEFILDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDEDEDDTASVENSSFTNSKKPKVD 123
           P  +++   V+N+ D N     ++S +    ++++ED+ +              K  K  
Sbjct: 264 PSLLVNEQQVVNDKDMNEN-GRVDSGSDCSDQIDDEDDPK-----------YKKKSGKGS 323

Query: 124 RSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKAEIS 183
           +++ L++ERRRR ++ ++LYALRSLVP ITK+D+ASI+GDA+ +VKELQ +AK+L+ E  
Sbjct: 324 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDE-- 383

Query: 184 VLESSINETQMNHRDQNQKKINQT------------------------SYSNQFFPTKII 239
            LE +      ++R Q    +N T                          SN        
Sbjct: 384 -LEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEP 443

[Close]

BLAST of Lsi10G012230.1 vs. Swiss-Prot
Match: BH027_ARATH (Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.1e-11
Identity = 45/133 (33.83%), Postives = 78/133 (58.65%), Query Frame = 1


Query: 125 SRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKAEISV 184
           S+ ++SER RR ++ ++L+ALRS+VPNI+K+DKAS++ D++ +++EL  Q K L+AEI  
Sbjct: 53  SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112

Query: 185 LES--------------SINETQM----NHRDQNQKKINQTSYSN--QFFPTKIIQLDVF 238
           LES              +  ET +    ++ D   KK  Q  YS   Q +P +++++ V 
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172

[Close]

BLAST of Lsi10G012230.1 vs. Swiss-Prot
Match: BH035_ARATH (Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 1


Query: 96  VENEDEDEDDTASVEN--SSFTNSKKP----KVDRSRTLISERRRRGRMKEKLYALRSLV 155
           ++NED + D +  +E   S   +S  P        S+ ++SER RR ++ ++L+ALRS+V
Sbjct: 19  LQNEDFEYDRSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVV 78

Query: 156 PNITKMDKASIVGDAVLHVKELQMQAKKLKAEISVLESSINETQMNHRDQNQ-------- 215
           PNITKMDKASI+ DA+ +++ LQ + KKL+AEI  LES+   +    +D ++        
Sbjct: 79  PNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTS 138

Query: 216 KKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVC 238
           KK+ Q    +     ++++L V  + ER   + + C
Sbjct: 139 KKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTC 174

[Close]

BLAST of Lsi10G012230.1 vs. Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08
Identity = 30/63 (47.62%), Postives = 50/63 (79.37%), Query Frame = 1


Query: 130 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKAEISVLESSI 189
           +ER+RR ++ ++ YALRS+VPNI+KMDKAS++GDA+ ++KELQ + K ++ E    + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458

Query: 190 NET 193
           +E+
Sbjct: 459 SES 461

[Close]

BLAST of Lsi10G012230.1 vs. TrEMBL
Match: A0A0A0KBI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G148250 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 8.9e-61
Identity = 132/157 (84.08%), Postives = 141/157 (89.81%), Query Frame = 1


Query: 1   MEQIVGHLMTNINDQFELQDFIHGDNLDQYVNLIRGGNENPLF-NNFDLDFMNGCLVENG 60
           MEQ   HLMT+INDQFELQDFIHGDN DQYVNLIRGGNE P+F NNFDLDFMNGCL+EN 
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDQYVNLIRGGNETPIFNNNFDLDFMNGCLIENR 60

Query: 61  -VDPSPEFILDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDEDEDDTASVENSSFTNSK 120
            VD S E+I+DSNMVM NSDPNSLFSTLESFNSIMKEVE+EDEDED+  SVENSS T SK
Sbjct: 61  VVDQSLEYIVDSNMVM-NSDPNSLFSTLESFNSIMKEVEDEDEDEDENESVENSSSTTSK 120

Query: 121 KPKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKM 156
           KPK DR+RTLISERRRRGRMKEKLYALRSLVPNITK+
Sbjct: 121 KPKADRTRTLISERRRRGRMKEKLYALRSLVPNITKV 156

[Close]

BLAST of Lsi10G012230.1 vs. TrEMBL
Match: A0A061GWC5_THECC (Basic helix-loop-helix protein BHLH20, putative OS=Theobroma cacao GN=TCM_041590 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.5e-47
Identity = 121/232 (52.16%), Postives = 162/232 (69.83%), Query Frame = 1


Query: 14  DQFELQDFIHGDNLDQYVNLIRGGNENPLFNNFDLDFMNGCLVENGVDPSP--EFILDSN 73
           + FEL DFI   N DQ+ +LIRG NE+ + + FD D +NGC V+  +  +P   F  D+ 
Sbjct: 13  NDFELHDFIDDPNFDQFNDLIRGENEDSVAD-FDYDLVNGCFVDKQIRSTPGDAFGFDAT 72

Query: 74  MVMNNSDPNSLFSTLESFNS-IMK--EVENEDEDEDDTASVENSSFTNSKKPKVDRSRTL 133
             M   DPN +++ L SF+  IMK  E +N+D+DE+ + +   +  T +KK K+DRSRTL
Sbjct: 73  SAMV-PDPNYIYNALSSFDGDIMKYGEEDNDDDDENSSGTTTTTITTATKKAKLDRSRTL 132

Query: 134 ISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKAEISVLESS 193
           ISERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAV +V++LQMQAKKLKAEI+ LE+S
Sbjct: 133 ISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVRYVQDLQMQAKKLKAEIAGLEAS 192

Query: 194 INETQMNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVCKMG 241
           +  ++      ++    Q + ++     KI Q+D+FQVEERGFY+RLVC  G
Sbjct: 193 LAGSERYQEPIDKPVKIQVARNSHPMCKKITQMDMFQVEERGFYIRLVCDKG 242

[Close]

BLAST of Lsi10G012230.1 vs. TrEMBL
Match: B9HQP2_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s01100g PE=4 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 7.6e-44
Identity = 127/259 (49.03%), Postives = 156/259 (60.23%), Query Frame = 1


Query: 8   LMTNINDQFELQDFIHGDNLDQYVNLIRGGNENPLFNNFDLDFMNGCLVENGVDPSPEFI 67
           L    N QF+LQDFI   N D+Y++LIRG NE      FD D +NG LV+N    S    
Sbjct: 9   LAAQTNFQFQLQDFIDEANFDRYIDLIRGENE---ITAFDCDLINGFLVDNQFGLSTGDK 68

Query: 68  LDSNMVMN---------NSDPNSLFSTLESFNSIMKEVENEDEDEDDTASVENSSFTNSK 127
            D +++ +           DPN +   L SF+  M     ED DE+D++       T +K
Sbjct: 69  FDCDLINHVPTHTSSAMEQDPNYVPIALPSFDGDMGLEAEEDTDEEDSSGTA----TTTK 128

Query: 128 KPKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKL 187
           K K DRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAVL+V+ELQMQA KL
Sbjct: 129 KTKKDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVQELQMQANKL 188

Query: 188 KAEISVLE-----------------SSINETQMNHRDQNQKKINQTSYSNQFFPTKIIQL 241
           KA+I+ LE                 S I   +    ++N K +  TS +N     KII++
Sbjct: 189 KADIASLELQMQANKLKADIASLESSLIGSDRYQGSNRNPKNLQNTS-NNHPIRKKIIKM 248

[Close]

BLAST of Lsi10G012230.1 vs. TrEMBL
Match: A0A067LIA4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05431 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 119/245 (48.57%), Postives = 162/245 (66.12%), Query Frame = 1


Query: 9   MTNINDQFELQDFIHGDNLDQYVNLIRGGNENPLFNNFDLDFMNGCLVENGVDPSPEFIL 68
           +  IN+ FEL DFI   N DQ+++LIRG NE+ +   FD D +NG LV + +    + + 
Sbjct: 17  LVQINNDFELHDFIDEANFDQFIDLIRGENEDQV-TGFDCDLINGLLVGHPLLNPTQDVF 76

Query: 69  D-------SNMVMNNSDPNSLFS--TLESFNSIMKEVENEDED---EDDTASVENSSFTN 128
           D       S    ++ + NS F   T+ +F+  +  V  E+ED   E+D++    ++ T 
Sbjct: 77  DIGGACTSSATAPSHQNYNSCFPSITMPNFDEGVMGVAEEEEDNDGEEDSSGTTTTTTTM 136

Query: 129 SKKPKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAK 188
           ++K K DRSRTLISER+RRGRMKEKLYALRSLVPNITKMDKASI+GDAVL+VK+LQMQAK
Sbjct: 137 NRKTKNDRSRTLISERKRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVKDLQMQAK 196

Query: 189 KLKAEISVLESSINETQ-MNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRL 241
           KL+ EI+ LE+S+  T+      +N +KI   + +       I+Q+DVFQVEERGFY+RL
Sbjct: 197 KLRTEIAGLEASLVGTEGYQGSSKNLRKIQIANNNCAICKKSIMQIDVFQVEERGFYVRL 256

[Close]

BLAST of Lsi10G012230.1 vs. TrEMBL
Match: A0A151SAP0_CAJCA (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Cajanus cajan GN=KK1_026319 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.1e-42
Identity = 116/240 (48.33%), Postives = 159/240 (66.25%), Query Frame = 1


Query: 9   MTNINDQFELQDFIHGDNLDQYVNLIRGGNENPLFNNFDLDFMNGCLVENGV--DPSPEF 68
           +T IND FEL DF+H  N DQ++NLIRG +E+   + F  D +N C V N +   P+  F
Sbjct: 11  LTYIND-FELYDFVHNPNFDQFINLIRGEDEDANCD-FGSDLINDCFVNNQLLSCPTNPF 70

Query: 69  ILDSNMVMNNSDPNSLFSTLESFNSIMK---EVENEDEDEDDTASVENSSFTNSK-KPKV 128
             ++N  ++  DP+S FS+   F+  +K   E E++ E   +T +    +  N   KPK+
Sbjct: 71  DQNNNNAVSVYDPSSTFSSFSCFDGEVKGHGEEEHDGEHSSETTTTTTMTTKNGDAKPKL 130

Query: 129 --DRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKA 188
             DRS+TLISERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAV +V ELQ QA+KLKA
Sbjct: 131 KTDRSKTLISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVSYVHELQAQARKLKA 190

Query: 189 EISVLESSINETQMNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVCKMG 241
           E++ LE+S+  ++      N  K  Q + ++     KI+Q+D+FQVEERG+Y ++VC  G
Sbjct: 191 EVAGLEASLLMSENYQGSINNPKNVQVARNSHPICKKIMQVDMFQVEERGYYAKIVCNKG 248

[Close]

BLAST of Lsi10G012230.1 vs. TAIR10
Match: AT2G28160.1 (AT2G28160.1 FER-like regulator of iron uptake)

HSP 1 Score: 164.9 bits (416), Expect = 9.1e-41
Identity = 116/242 (47.93%), Postives = 156/242 (64.46%), Query Frame = 1


Query: 9   MTNINDQFELQDFIHGDNLDQYVNLIRGGN----ENPLFNNFDLDFMNG--CLV-ENGVD 68
           ++NIND  EL +F+   N DQ++NLIRG +    ENP+ + FDL  +    C + EN   
Sbjct: 8   LSNIND-LELHNFLVDPNFDQFINLIRGDHQTIDENPVLD-FDLGPLQNSPCFIDENQFI 67

Query: 69  PSPEFILDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDED--EDDTASVENSSFTNSKK 128
           P+P   L   +   +S+    F + +  +S+    E ++ED  + D +S   ++   ++K
Sbjct: 68  PTPVDDLFDELPDLDSNVAESFRSFDG-DSVRAGGEEDEEDYNDGDDSSATTTNNDGTRK 127

Query: 129 PKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLK 188
            K DRSRTLISERRRRGRMK+KLYALRSLVPNITKMDKASIVGDAVL+V+ELQ QAKKLK
Sbjct: 128 TKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLK 187

Query: 189 AEISVLESSINET-QMNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVCK 241
           ++I+ LE+S+N T        + +K       N     KIIQ+DV QVEE+GFY+RLVC 
Sbjct: 188 SDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFYVRLVCN 246

[Close]

BLAST of Lsi10G012230.1 vs. TAIR10
Match: AT2G16910.1 (AT2G16910.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 4.7e-13
Identity = 59/199 (29.65%), Postives = 103/199 (51.76%), Query Frame = 1


Query: 64  PEFILDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDEDEDDTASVENSSFTNSKKPKVD 123
           P  +++   V+N+ D N     ++S +    ++++ED+ +              K  K  
Sbjct: 264 PSLLVNEQQVVNDKDMNEN-GRVDSGSDCSDQIDDEDDPK-----------YKKKSGKGS 323

Query: 124 RSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKAEIS 183
           +++ L++ERRRR ++ ++LYALRSLVP ITK+D+ASI+GDA+ +VKELQ +AK+L+ E  
Sbjct: 324 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDE-- 383

Query: 184 VLESSINETQMNHRDQNQKKINQT------------------------SYSNQFFPTKII 239
            LE +      ++R Q    +N T                          SN        
Sbjct: 384 -LEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEP 443

[Close]

BLAST of Lsi10G012230.1 vs. TAIR10
Match: AT4G29930.3 (AT4G29930.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 4.0e-12
Identity = 45/133 (33.83%), Postives = 78/133 (58.65%), Query Frame = 1


Query: 125 SRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKAEISV 184
           S+ ++SER RR ++ ++L+ALRS+VPNI+K+DKAS++ D++ +++EL  Q K L+AEI  
Sbjct: 53  SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112

Query: 185 LES--------------SINETQM----NHRDQNQKKINQTSYSN--QFFPTKIIQLDVF 238
           LES              +  ET +    ++ D   KK  Q  YS   Q +P +++++ V 
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172

[Close]

BLAST of Lsi10G012230.1 vs. TAIR10
Match: AT5G57150.4 (AT5G57150.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 6.8e-12
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 1


Query: 96  VENEDEDEDDTASVEN--SSFTNSKKP----KVDRSRTLISERRRRGRMKEKLYALRSLV 155
           ++NED + D +  +E   S   +S  P        S+ ++SER RR ++ ++L+ALRS+V
Sbjct: 19  LQNEDFEYDRSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVV 78

Query: 156 PNITKMDKASIVGDAVLHVKELQMQAKKLKAEISVLESSINETQMNHRDQNQ-------- 215
           PNITKMDKASI+ DA+ +++ LQ + KKL+AEI  LES+   +    +D ++        
Sbjct: 79  PNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTS 138

Query: 216 KKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVC 238
           KK+ Q    +     ++++L V  + ER   + + C
Sbjct: 139 KKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTC 174

[Close]

BLAST of Lsi10G012230.1 vs. TAIR10
Match: AT2G46510.1 (AT2G46510.1 ABA-inducible BHLH-type transcription factor)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09
Identity = 30/63 (47.62%), Postives = 50/63 (79.37%), Query Frame = 1


Query: 130 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKAEISVLESSI 189
           +ER+RR ++ ++ YALRS+VPNI+KMDKAS++GDA+ ++KELQ + K ++ E    + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458

Query: 190 NET 193
           +E+
Sbjct: 459 SES 461

[Close]

BLAST of Lsi10G012230.1 vs. NCBI nr
Match: gi|449456162|ref|XP_004145819.1| (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Cucumis sativus])

HSP 1 Score: 382.5 bits (981), Expect = 7.9e-103
Identity = 209/242 (86.36%), Postives = 221/242 (91.32%), Query Frame = 1


Query: 1   MEQIVGHLMTNINDQFELQDFIHGDNLDQYVNLIRGGNENPLF-NNFDLDFMNGCLVENG 60
           MEQ   HLMT+INDQFELQDFIHGDN DQYVNLIRGGNE P+F NNFDLDFMNGCL+EN 
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDQYVNLIRGGNETPIFNNNFDLDFMNGCLIENR 60

Query: 61  -VDPSPEFILDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDEDEDDTASVENSSFTNSK 120
            VD S E+I+DSNMVM NSDPNSLFSTLESFNSIMKEVE+EDEDED+  SVENSS T SK
Sbjct: 61  VVDQSLEYIVDSNMVM-NSDPNSLFSTLESFNSIMKEVEDEDEDEDENESVENSSSTTSK 120

Query: 121 KPKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKL 180
           KPK DR+RTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVL+VKELQMQAKKL
Sbjct: 121 KPKADRTRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKKL 180

Query: 181 KAEISVLESSINETQMNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVCK 240
           K+EISVLESSINETQ  HRDQ +KKI QTSYS+QF PTKIIQLDVFQVEERGFYLRLVCK
Sbjct: 181 KSEISVLESSINETQKVHRDQTKKKIIQTSYSDQFLPTKIIQLDVFQVEERGFYLRLVCK 240

[Close]

BLAST of Lsi10G012230.1 vs. NCBI nr
Match: gi|659130918|ref|XP_008465418.1| (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Cucumis melo])

HSP 1 Score: 375.6 bits (963), Expect = 9.7e-101
Identity = 208/244 (85.25%), Postives = 221/244 (90.57%), Query Frame = 1


Query: 1   MEQIVGHLMTNINDQFELQDFIHGDNLDQYVNLIRGGNENPLFNN-FDLDFMNGCLVENG 60
           MEQ   HLMT+INDQFELQDFIHGDN D+YVNLIRGGNE P+FNN FDLDF+NGCL+E+ 
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDRYVNLIRGGNETPIFNNNFDLDFVNGCLIEDR 60

Query: 61  V-DPSPEFILDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDEDEDD--TASVENSSFTN 120
           V D S E+I+DSNMVMN SDPNSLFSTLESFNSIMKEVENEDEDED+    SVENSS T 
Sbjct: 61  VVDQSLEYIVDSNMVMN-SDPNSLFSTLESFNSIMKEVENEDEDEDEDENESVENSSSTT 120

Query: 121 SKKPKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAK 180
           SKKPK DR+RTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVL+VKELQMQAK
Sbjct: 121 SKKPKADRTRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAK 180

Query: 181 KLKAEISVLESSINETQMNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLV 240
           KLKAEISVLESSINETQ  HRDQ +KKI QTSYS+QF PTKIIQLDVFQVEERGFYLRLV
Sbjct: 181 KLKAEISVLESSINETQKIHRDQTKKKIIQTSYSDQFLPTKIIQLDVFQVEERGFYLRLV 240

[Close]

BLAST of Lsi10G012230.1 vs. NCBI nr
Match: gi|700191679|gb|KGN46883.1| (hypothetical protein Csa_6G148250 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60
Identity = 132/157 (84.08%), Postives = 141/157 (89.81%), Query Frame = 1


Query: 1   MEQIVGHLMTNINDQFELQDFIHGDNLDQYVNLIRGGNENPLF-NNFDLDFMNGCLVENG 60
           MEQ   HLMT+INDQFELQDFIHGDN DQYVNLIRGGNE P+F NNFDLDFMNGCL+EN 
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDQYVNLIRGGNETPIFNNNFDLDFMNGCLIENR 60

Query: 61  -VDPSPEFILDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDEDEDDTASVENSSFTNSK 120
            VD S E+I+DSNMVM NSDPNSLFSTLESFNSIMKEVE+EDEDED+  SVENSS T SK
Sbjct: 61  VVDQSLEYIVDSNMVM-NSDPNSLFSTLESFNSIMKEVEDEDEDEDENESVENSSSTTSK 120

Query: 121 KPKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKM 156
           KPK DR+RTLISERRRRGRMKEKLYALRSLVPNITK+
Sbjct: 121 KPKADRTRTLISERRRRGRMKEKLYALRSLVPNITKV 156

[Close]

BLAST of Lsi10G012230.1 vs. NCBI nr
Match: gi|590587834|ref|XP_007016069.1| (Basic helix-loop-helix protein BHLH20, putative [Theobroma cacao])

HSP 1 Score: 195.7 bits (496), Expect = 1.4e-46
Identity = 121/232 (52.16%), Postives = 162/232 (69.83%), Query Frame = 1


Query: 14  DQFELQDFIHGDNLDQYVNLIRGGNENPLFNNFDLDFMNGCLVENGVDPSP--EFILDSN 73
           + FEL DFI   N DQ+ +LIRG NE+ + + FD D +NGC V+  +  +P   F  D+ 
Sbjct: 13  NDFELHDFIDDPNFDQFNDLIRGENEDSVAD-FDYDLVNGCFVDKQIRSTPGDAFGFDAT 72

Query: 74  MVMNNSDPNSLFSTLESFNS-IMK--EVENEDEDEDDTASVENSSFTNSKKPKVDRSRTL 133
             M   DPN +++ L SF+  IMK  E +N+D+DE+ + +   +  T +KK K+DRSRTL
Sbjct: 73  SAMV-PDPNYIYNALSSFDGDIMKYGEEDNDDDDENSSGTTTTTITTATKKAKLDRSRTL 132

Query: 134 ISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKLKAEISVLESS 193
           ISERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAV +V++LQMQAKKLKAEI+ LE+S
Sbjct: 133 ISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVRYVQDLQMQAKKLKAEIAGLEAS 192

Query: 194 INETQMNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVCKMG 241
           +  ++      ++    Q + ++     KI Q+D+FQVEERGFY+RLVC  G
Sbjct: 193 LAGSERYQEPIDKPVKIQVARNSHPMCKKITQMDMFQVEERGFYIRLVCDKG 242

[Close]

BLAST of Lsi10G012230.1 vs. NCBI nr
Match: gi|1009115910|ref|XP_015874491.1| (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Ziziphus jujuba])

HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45
Identity = 118/242 (48.76%), Postives = 161/242 (66.53%), Query Frame = 1


Query: 13  NDQFELQDFIHGDNLDQYVNLIRGG-NENPLFNNFDLD-FMNGCLVENGV---DPSPEFI 72
           N++FELQDFI     DQ+++LIRG  NE+P+ + FD D  +NG  ++NG    +P   F 
Sbjct: 14  NNEFELQDFIDDAKFDQFIDLIRGSENEDPVAS-FDCDELINGSFIDNGQFGQNPEGIFG 73

Query: 73  LDSNMVMNNSDPNSLFSTLESFNSIMKEVENEDEDEDDTASVENSSFTNS---------K 132
            D+ MV+  SDP S   TL +++      E+ + D D+ +S   ++ T +         K
Sbjct: 74  FDAKMVL--SDPTSFDITLPNYDGGDLVFEDNENDGDEFSSATTTTTTTTTTPTTTNTGK 133

Query: 133 KPKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLHVKELQMQAKKL 192
           +PKVDRSRTL+SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAVL+V++LQ QAKKL
Sbjct: 134 RPKVDRSRTLVSERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVQDLQAQAKKL 193

Query: 193 KAEISVLESSINETQMNHRDQNQKKINQTSYSNQFFPTKIIQLDVFQVEERGFYLRLVCK 241
           KAEI+ LE+S+NE + N   +   K+   + +       I Q+D+FQVE RGFY+++ C 
Sbjct: 194 KAEIAGLEASLNEAERNQESRENTKMRNAADAKHLVTKNIFQMDMFQVEVRGFYVKVACN 252

The following BLAST results are available for this feature:

BLAST of Lsi10G012230.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FIT_ARATH	1.6e-39	47.93	Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Ar...	[more]
AMS_ARATH	8.4e-12	29.65	Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=...	[more]
BH027_ARATH	7.1e-11	33.83	Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2 SV=1	[more]
BH035_ARATH	1.2e-10	33.97	Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1	[more]
AIB_ARATH	1.9e-08	47.62	Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2...	[more]

BLAST of Lsi10G012230.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBI7_CUCSA	8.9e-61	84.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G148250 PE=4 SV=1	[more]
A0A061GWC5_THECC	9.5e-47	52.16	Basic helix-loop-helix protein BHLH20, putative OS=Theobroma cacao GN=TCM_041590...	[more]
B9HQP2_POPTR	7.6e-44	49.03	Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s01100...	[more]
A0A067LIA4_JATCU	2.9e-43	48.57	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05431 PE=4 SV=1	[more]
A0A151SAP0_CAJCA	7.1e-42	48.33	Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Ca...	[more]

BLAST of Lsi10G012230.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G28160.1	9.1e-41	47.93	FER-like regulator of iron uptake	[more]
AT2G16910.1	4.7e-13	29.65	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G29930.3	4.0e-12	33.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.4	6.8e-12	33.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G46510.1	1.1e-09	47.62	ABA-inducible BHLH-type transcription factor	[more]

BLAST of Lsi10G012230.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456162\|ref\|XP_004145819.1\|	7.9e-103	86.36	PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F...	[more]
gi\|659130918\|ref\|XP_008465418.1\|	9.7e-101	85.25	PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F...	[more]
gi\|700191679\|gb\|KGN46883.1\|	1.3e-60	84.08	hypothetical protein Csa_6G148250 [Cucumis sativus]	[more]
gi\|590587834\|ref\|XP_007016069.1\|	1.4e-46	52.16	Basic helix-loop-helix protein BHLH20, putative [Theobroma cacao]	[more]
gi\|1009115910\|ref\|XP_015874491.1\|	2.6e-45	48.76	PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi10G012230	Lsi10G012230	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G012230.1.CDS.4	Lsi10G012230.1.CDS.4	CDS
Lsi10G012230.1.CDS.3	Lsi10G012230.1.CDS.3	CDS
Lsi10G012230.1.CDS.2	Lsi10G012230.1.CDS.2	CDS
Lsi10G012230.1.CDS.1	Lsi10G012230.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G012230.1.five_prime_UTR.1	Lsi10G012230.1.five_prime_UTR.1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi10G012230.1	Lsi10G012230.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 124..192 score: 7.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 129..172 score: 8.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 128..177 score: 2.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 122..171 score: 14
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 124..196 score: 1.31
None	No IPR available	unknown	Coil	Coil	coord: 168..195 scor
None	No IPR available	PANTHER	PTHR31945	FAMILY NOT NAMED	coord: 12..237 score: 1.3
None	No IPR available	PANTHER	PTHR31945:SF17	TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR	coord: 12..237 score: 1.3