Lsi10G008250.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G008250.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Arabidopsis protein of unknown function (DUF241)
Location	chr10 : 11535514 .. 11537267 (+)
Sequence length	1090

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTCTTCTGTCCTTGTTCAAATGGGAGGCTCCTCCAATTACCATGCTCGTTCCAACAGCCTACCCACGAGGCCTCACCCCCTCGTGACGGAGTGCGACGAGCACCTATGCCGGCTGAAGGCGCTGGACTCGGGTCCATGGACGGCGTCGGGGATGGCGAAGAAGCTGGCGGGGCTGCAGGACTTGCAGGAATGCGTGAATAAGCTGCTGCTGTTGCGGCGAACGAGGGACGCCTTTGCCACGCAGCGCCGGGAGAAATGGGTCGATGAGGTGTTTGATGGATCGTTGAGATTGCTGGACTTGTGCAGTGCTTCTAAGGATGGTGTTATTCATACTAAGGAGTGTGTGAGGGAGTTGCAATCTTTGGTTAGGAGAAGATCCTCTTCTTGGTGTTGTGGAAATGGCGTTGCTAATCAGGTTTGTGTTTTCAACTCTCTCGTTTGTAAGATGATGGATTAATTTCTATATTTGTAATAATATTAGAATGTGTTGATAAGTTTTGATTTGATTTGATTTGATTTTGAAGTTGATAAATATTGCGATGTTTTTAGCTTATACTTGAACGAGTATTGCAATGGATCATTTGGTCTTCCTCTCGCGACGGTCGTACTTTTATATAGTAGAGAATATATGGGACGACTCTAGAGAGAGAAAGATGTTAATTTTGTTGAAATTTGCAAGTTTTGAGAGTTTTATTCAATATTGGTTGATTTGGGTTCATTTTCGTCGAGCCTACTTTGGTGCAAAATCAAAAATTTTATCGAATTTGGTGAAATTGGAGATCTTTTTTCTTTGAGTATAATGATTTGGAGGTGAGGAGAGATTCAAACCTCTAATTTTCTTGGAGTCAAGAAGGTATGTCTTATGGCAGTTGAGCTATACTCACGTTAATGTGATTTTCGAGATCTTTTTAATATGATTAGTCGATGTATGTAATAGAGATAGAAAACTTGTGGTAAAGATTAATACACCTGACCAAACCTTTGAGTTTTTCTAATTTGTATACATGTCCTTATTCTGATACCATATTAATCTACTGGTAAATGCAAAAATTAATAACCTTTAACCTTTTGATTCACAGGTGGAGAAATATTTAGCCTCAAGAAAAGTAGTGAAAAGAGCCATCCAAAAGGCTTTAGCTAGCGTGAAGACTTATGGGGCAAAACCAAGTTTAATTTCCATTAAAGATGCTGAAACTGTGGCCTTAATAACTCTATTATTCGACGTAGAAGTTGCAAGTGTGAATGTTTTTGAAGCCCTCTTGAGCTATGTTTTGGGGAAGAAAGGAAAGTCCAAAGGTAGCGGTTGGACGCTAGTTTCAAAGCTAATGCGCTCTAAACGAGCGTTTTTAACTGAGGAGGGTGCAGAAGGAGAGACAAATGAGTTCGCCACCGTGGACGCAGCGGTCGACACAGTGGCGAGCAGATTAGCCTCCGATGGCACTGTTGTAGGCGGTGGCGGCCTAGAGAGCATGGGAGATCAGTTAGGGAAGTTGGAAGCATGTGTTCAAGATTTAGAAGGAGGATTAGATGGTTTGTTTAGGAGATTGATAAGAAATAGGGTTTCACTTTTGAATATTATCAATAACTAAGGATATGTGAGAAAGAATGTTAATTGAAGTTAATGGGATTCCATTGATGTGTGTATTTTTGAGGCCATATATGGAAGGTTTGTAGATGAATATAATTAATGGCAAATATATGTGTGTAAATATATTTGTCTTTCAAAAACGTATAAAGGGTATTCTCTCCCAA

mRNA sequence

GTCTCTTCTGTCCTTGTTCAAATGGGAGGCTCCTCCAATTACCATGCTCGTTCCAACAGCCTACCCACGAGGCCTCACCCCCTCGTGACGGAGTGCGACGAGCACCTATGCCGGCTGAAGGCGCTGGACTCGGGTCCATGGACGGCGTCGGGGATGGCGAAGAAGCTGGCGGGGCTGCAGGACTTGCAGGAATGCGTGAATAAGCTGCTGCTGTTGCGGCGAACGAGGGACGCCTTTGCCACGCAGCGCCGGGAGAAATGGGTCGATGAGGTGTTTGATGGATCGTTGAGATTGCTGGACTTGTGCAGTGCTTCTAAGGATGGTGTTATTCATACTAAGGAGTGTGTGAGGGAGTTGCAATCTTTGGTTAGGAGAAGATCCTCTTCTTGGTGTTGTGGAAATGGCGTTGCTAATCAGGTGGAGAAATATTTAGCCTCAAGAAAAGTAGTGAAAAGAGCCATCCAAAAGGCTTTAGCTAGCGTGAAGACTTATGGGGCAAAACCAAGTTTAATTTCCATTAAAGATGCTGAAACTGTGGCCTTAATAACTCTATTATTCGACGTAGAAGTTGCAAGTGTGAATGTTTTTGAAGCCCTCTTGAGCTATGTTTTGGGGAAGAAAGGAAAGTCCAAAGGTAGCGGTTGGACGCTAGTTTCAAAGCTAATGCGCTCTAAACGAGCGTTTTTAACTGAGGAGGGTGCAGAAGGAGAGACAAATGAGTTCGCCACCGTGGACGCAGCGGTCGACACAGTGGCGAGCAGATTAGCCTCCGATGGCACTGTTGTAGGCGGTGGCGGCCTAGAGAGCATGGGAGATCAGTTAGGGAAGTTGGAAGCATGTGTTCAAGATTTAGAAGGAGGATTAGATGGTTTGTTTAGGAGATTGATAAGAAATAGGGTTTCACTTTTGAATATTATCAATAACTAAGGATATGTGAGAAAGAATGTTAATTGAAGTTAATGGGATTCCATTGATGTGTGTATTTTTGAGGCCATATATGGAAGGTTTGTAGATGAATATAATTAATGGCAAATATATGTGTGTAAATATATTTGTCTTTCAAAAACGTATAAAGGGTATTCTCTCCCAA

Coding sequence (CDS)

ATGGGAGGCTCCTCCAATTACCATGCTCGTTCCAACAGCCTACCCACGAGGCCTCACCCCCTCGTGACGGAGTGCGACGAGCACCTATGCCGGCTGAAGGCGCTGGACTCGGGTCCATGGACGGCGTCGGGGATGGCGAAGAAGCTGGCGGGGCTGCAGGACTTGCAGGAATGCGTGAATAAGCTGCTGCTGTTGCGGCGAACGAGGGACGCCTTTGCCACGCAGCGCCGGGAGAAATGGGTCGATGAGGTGTTTGATGGATCGTTGAGATTGCTGGACTTGTGCAGTGCTTCTAAGGATGGTGTTATTCATACTAAGGAGTGTGTGAGGGAGTTGCAATCTTTGGTTAGGAGAAGATCCTCTTCTTGGTGTTGTGGAAATGGCGTTGCTAATCAGGTGGAGAAATATTTAGCCTCAAGAAAAGTAGTGAAAAGAGCCATCCAAAAGGCTTTAGCTAGCGTGAAGACTTATGGGGCAAAACCAAGTTTAATTTCCATTAAAGATGCTGAAACTGTGGCCTTAATAACTCTATTATTCGACGTAGAAGTTGCAAGTGTGAATGTTTTTGAAGCCCTCTTGAGCTATGTTTTGGGGAAGAAAGGAAAGTCCAAAGGTAGCGGTTGGACGCTAGTTTCAAAGCTAATGCGCTCTAAACGAGCGTTTTTAACTGAGGAGGGTGCAGAAGGAGAGACAAATGAGTTCGCCACCGTGGACGCAGCGGTCGACACAGTGGCGAGCAGATTAGCCTCCGATGGCACTGTTGTAGGCGGTGGCGGCCTAGAGAGCATGGGAGATCAGTTAGGGAAGTTGGAAGCATGTGTTCAAGATTTAGAAGGAGGATTAGATGGTTTGTTTAGGAGATTGATAAGAAATAGGGTTTCACTTTTGAATATTATCAATAACTAA

Protein sequence

MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVNKLLLLRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISIKDAETVALITLLFDVEVASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAAVDTVASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNIINN

Homology

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BLAST of Lsi10G008250.1 vs. TrEMBL
Match: A0A0A0KG43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127330 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 1.5e-152
Identity = 278/302 (92.05%), Postives = 288/302 (95.36%), Query Frame = 1


Query: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVN 60
           MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKA+DS PWTA GMA KLAGLQDLQECVN
Sbjct: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVN 60

Query: 61  KLLLLRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120
           KLLLLRRTRDAFA  RREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS
Sbjct: 61  KLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120

Query: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISIKDAETVALITLLFD 180
           SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGA+PS ISIKD ET+ALITLLFD
Sbjct: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFD 180

Query: 181 VEVASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAA 240
           VEVASVNVFEALLSYVLGKKGK+KGSGW LVSKLMRSKR  LTE+GAEGE NEFAT+DAA
Sbjct: 181 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA 240

Query: 241 VDTVASRLASD-GTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNII 300
           VD VASRLASD  T++GGGG+ESMGDQLGKLEACVQDLEGGL+GLFRRLIRNRVSLLNII
Sbjct: 241 VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII 300

Query: 301 NN 302
           NN
Sbjct: 301 NN 302

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BLAST of Lsi10G008250.1 vs. TrEMBL
Match: M5VME9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025877mg PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.0e-68
Identity = 150/301 (49.83%), Postives = 210/301 (69.77%), Query Frame = 1


Query: 5   SNYHARSNSLPTRPHPLVTECDEHLCRLKALD---SGPWTASGMAKKLAGLQDLQECVNK 64
           SNYH RS SLP++PHPL  +C++HL R+ A D   S  +++S +++KL+GL DL  C+N+
Sbjct: 11  SNYHIRSISLPSKPHPLFQQCEDHLLRIAASDASSSSSYSSSSISQKLSGLLDLHNCLNE 70

Query: 65  LLLLRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSS 124
           L  L  T++AF  ++ EKWVDE+ DGSLRLLD+C+A+KD +IHTKEC RE+QS++RRR  
Sbjct: 71  LFQLPLTQEAFVREQNEKWVDELLDGSLRLLDVCTAAKDALIHTKECAREIQSIMRRRRG 130

Query: 125 SWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISI-KDAETVALITLLFD 184
                +G  N+V KYLASRKVVK+A+ KAL +++T   K +  S  KD  TVALI +L +
Sbjct: 131 G---KSGFTNEVRKYLASRKVVKKAVCKALGTLRTSQKKSTFSSTNKDNVTVALIGVLRE 190

Query: 185 VEVASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAA 244
           VE  S+ VFE+LLS++ G K  SK  GW+ VSKLM +K+    E+  + E NEFA VDAA
Sbjct: 191 VEAVSLTVFESLLSFISGAKSASKMRGWSFVSKLMLTKKVGCEED--KTEINEFADVDAA 250

Query: 245 VDTVASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNIIN 302
           + ++  +  S+   +     E++  +L +LE C QDLE GL+ LFRRLI+NRVSLLN ++
Sbjct: 251 LSSLVCQETSNSDSMVDS--ENVQSELQQLEMCSQDLEEGLECLFRRLIKNRVSLLNTLS 304

[Close]

BLAST of Lsi10G008250.1 vs. TrEMBL
Match: W9S9W8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014368 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.7e-68
Identity = 150/300 (50.00%), Postives = 212/300 (70.67%), Query Frame = 1


Query: 4   SSNYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVNKLL 63
           +S++H RSNSLP++ +PL+ +C+E+L RL+A  +   ++S + ++L+GL+DL ECV KLL
Sbjct: 5   NSHFHVRSNSLPSQSNPLLLQCNENLSRLEARGATS-SSSFITQRLSGLEDLHECVEKLL 64

Query: 64  LLRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSW 123
           LL  T+ AF   R+E+W+D++ DGSLRLLDLCS++KD V+HTKEC R++QS++RRR  + 
Sbjct: 65  LLPSTQQAFVQGRQEQWIDQLVDGSLRLLDLCSSAKDAVLHTKECARDIQSIMRRRRGAE 124

Query: 124 CCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSL--ISIKDAETVALITLLFDV 183
               G+ +++ KYLASRKVVKRAI KAL S+K+   K S   +S KD ET+ALI++L +V
Sbjct: 125 V---GLESEISKYLASRKVVKRAINKALGSLKSVETKSSFSDLSNKDGETIALISVLKEV 184

Query: 184 EVASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAAV 243
           EV ++ VFE+LLS++ G K ++K  GW+LVSK+M SKR    E   E + NEFA VDAA+
Sbjct: 185 EVVALAVFESLLSFISGPKAQTKLGGWSLVSKIMHSKRVGCEE---EQQVNEFAKVDAAM 244

Query: 244 DTVASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNIINN 302
             + S             +E +  +L  LE CVQD E  L+ LFRRLI+ RVSLLNI+NN
Sbjct: 245 HRLMSHKMQ---------IEKVQSELQILEMCVQDFEERLECLFRRLIKTRVSLLNILNN 288

[Close]

BLAST of Lsi10G008250.1 vs. TrEMBL
Match: W9RKX3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014372 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 155/302 (51.32%), Postives = 204/302 (67.55%), Query Frame = 1


Query: 5   SNYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVNKLLL 64
           S YH RSNS PTRPHPL   CDEHLCRL A ++   ++S ++ KL+GL+DL +CV KL  
Sbjct: 6   SQYHVRSNSFPTRPHPLFQRCDEHLCRLGASEAT--SSSSLSHKLSGLEDLHDCVEKLFQ 65

Query: 65  LRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWC 124
           L  T+ AF   R EKWVDE  DGSLRLLD+CSA+KD V+HTKEC RE+QS++RRR  +  
Sbjct: 66  LPLTQQAFVHSRHEKWVDEQVDGSLRLLDMCSAAKDAVLHTKECAREVQSIMRRRRGAEV 125

Query: 125 CGNGVANQVEKYLASRKVVKRAIQKAL----ASVKTYGAKPSLISIKDAETVALITLLFD 184
              G+A +V KYLASRKVVK+AI+KAL    A+VK+  + P+   +   ET AL+ +L +
Sbjct: 126 ---GLAGEVTKYLASRKVVKKAIRKALENMKAAVKSSSSSPTNKDM-TVETAALVGVLRE 185

Query: 185 VEVASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAF-LTEEGAEGETNEFATVDA 244
           VE  S+ VFE+LL ++ G K ++K SGW+LVSKLM +K+     +E  E + NEFA V+ 
Sbjct: 186 VESVSLAVFESLLCFISGPKAQTKLSGWSLVSKLMNNKKKVGCDQEAQETDVNEFAKVEE 245

Query: 245 AVDTVASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNII 302
           A+  +     S   V     +E+   +L  LE CVQD E  L+ LFRRLI+NRVSLLNI+
Sbjct: 246 ALQRLMCHDTS--KVENSLHIENAQTELQSLELCVQDFEERLERLFRRLIKNRVSLLNIL 299

[Close]

BLAST of Lsi10G008250.1 vs. TrEMBL
Match: W9RW89_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014365 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66
Identity = 146/298 (48.99%), Postives = 208/298 (69.80%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVNKLLLL 65
           ++H RSNSLP++ +PL+ +C+E+L RL+A  +   ++S + +KL+GL+DL ECV KLLL 
Sbjct: 7   HFHVRSNSLPSQSNPLLLQCNENLSRLEACGATS-SSSFITQKLSGLEDLHECVEKLLLF 66

Query: 66  RRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWCC 125
             T+ AF   R+E+W+D++ DGSLRLLDLCS++KD V+HTKEC R++QS++ RR  +   
Sbjct: 67  PSTQQAFVQGRQEQWIDQLVDGSLRLLDLCSSAKDAVLHTKECARDIQSIMHRRRGAEV- 126

Query: 126 GNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSL--ISIKDAETVALITLLFDVEV 185
             G+ +++ KYLASRKVVKRA+ KAL S+K+   K S   +S KD ET+ALI++L +VEV
Sbjct: 127 --GLESEISKYLASRKVVKRALNKALGSLKSVETKSSFSDLSNKDGETIALISVLKEVEV 186

Query: 186 ASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAAVDT 245
            ++ VFE+LLS++ G K ++K  GW+LVSK+M SKR    E   E + NEFA VDAA+  
Sbjct: 187 VTLAVFESLLSFISGPKAQTKLGGWSLVSKIMHSKRVGCEE---EQQVNEFAKVDAAMHR 246

Query: 246 VASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNIINN 302
           + S             +E +  +L  LE CVQD E  L+ LFRRLI+ RVSLLNI+N+
Sbjct: 247 LMSHKMQ---------IEKVQSELQILEMCVQDFEERLECLFRRLIKTRVSLLNILND 288

[Close]

BLAST of Lsi10G008250.1 vs. TAIR10
Match: AT2G17080.1 (AT2G17080.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-40
Identity = 105/297 (35.35%), Postives = 172/297 (57.91%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKALD-SGPWTASGMAKKLAGLQDLQECVNKLLL 65
           ++H RSNS P+R HP     DE L RL++ + +   ++S + ++L  LQ+L E ++KL+ 
Sbjct: 4   SFHVRSNSFPSRSHPQAAHVDEQLARLRSSEQASSSSSSSICQRLDNLQELHESLDKLIS 63

Query: 66  LRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWC 125
              T+ A + +  +K V+++ DGSLR+LDLC+ SKD +   KE + E+QS++RR+     
Sbjct: 64  RPVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSILRRKRGD-- 123

Query: 126 CGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISIKDAETVALITLLFDVEVA 185
               ++ +V+KYL SRK +K++ QK   S+K   A+ +     + +T+A+     + E  
Sbjct: 124 ----LSEEVKKYLTSRKSLKKSFQKVQKSLKVTQAEDN-----NDDTLAVFG---EAEAI 183

Query: 186 SVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAAVDTV 245
           ++++F++LLSY+ G K  SK   W++VSKLM  K+        E + NEF  VD      
Sbjct: 184 TLSLFDSLLSYMSGSKTCSK---WSVVSKLMNKKKV-----TCEAQENEFTKVD------ 243

Query: 246 ASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNIINN 302
            S   S+ T+          D +  LE+C+QDLE GL+ L + LI+ RVS LNI+ +
Sbjct: 244 -SEFQSEKTL--------KMDDVQNLESCIQDLEDGLESLSKSLIKYRVSFLNILGH 263

[Close]

BLAST of Lsi10G008250.1 vs. TAIR10
Match: AT4G35210.1 (AT4G35210.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 158.7 bits (400), Expect = 5.7e-39
Identity = 105/294 (35.71%), Postives = 162/294 (55.10%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVNKLLLL 65
           ++H RS+S P+R HP     DE L RL++  SG  ++S + ++L+ LQDL + + K++ L
Sbjct: 4   SFHVRSSSYPSRQHPQAAHVDEQLTRLRS--SGTASSSSICQRLSNLQDLHDSLEKMIRL 63

Query: 66  RRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWCC 125
             T  A +  + EK    + DGS+++LDLCS SKDG+   KE ++E+QS+VRR+      
Sbjct: 64  SVTNQALSQDQIEK----LLDGSIKILDLCSISKDGLSQMKESLKEIQSIVRRKRGD--- 123

Query: 126 GNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISI-KDAETVALITLLFDVEVA 185
              ++ +V+KYLASRK +K++ +K L S+KT   K   +++  +AETV            
Sbjct: 124 ---LSAEVKKYLASRKFLKKSFEKVLKSLKTSQNKNDALAVFGEAETV------------ 183

Query: 186 SVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAAVDTV 245
           ++ +FE+L S++ G K   K   W+LVSK+M   +        E E NEF  VD    + 
Sbjct: 184 TIALFESLFSFMSGSKACGK---WSLVSKMMSQSKG-----TCEAEANEFTRVDMEFQSE 243

Query: 246 ASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNI 299
            S    D               +  LE C+QDLE G+  L + LI+ RVS+LNI
Sbjct: 244 KSLQMED---------------VQNLEICIQDLEDGIGSLSKSLIKYRVSILNI 250

[Close]

BLAST of Lsi10G008250.1 vs. TAIR10
Match: AT4G35200.1 (AT4G35200.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-38
Identity = 101/293 (34.47%), Postives = 161/293 (54.95%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVNKLLLL 65
           ++H RSNS P+R HP     DE L RL++ DS   ++S + ++L+ LQDL + + K++ L
Sbjct: 4   SFHVRSNSYPSRQHPQAAHVDEQLTRLRSSDSA--SSSSICQRLSNLQDLHDSLEKMIRL 63

Query: 66  RRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWCC 125
             T  A +  + EK    + DGSLR+LDLC+ +KD +   KE + E+QS++RR+      
Sbjct: 64  SVTNLALSQDQIEK----LLDGSLRILDLCNIAKDAISQMKEGLMEIQSILRRKPGD--- 123

Query: 126 GNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISIKDAETVALITLLFDVEVAS 185
              ++ +V+KYL SRK +K+++QK + S+K   +K S        T A + +    E  +
Sbjct: 124 ---LSGEVKKYLVSRKFLKKSLQKVIKSLKVCQSKDS--------TNASLVVFGRAEAVT 183

Query: 186 VNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAAVDTVA 245
           + +FE+L S++ G K   K   W+LVSK+M   +        E E NEF  +D+   +  
Sbjct: 184 MALFESLFSFMSGSKACGK---WSLVSKMMSQNKVT-----CEAEANEFTRIDSEFQSEK 243

Query: 246 SRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNI 299
           S    D               +  LE+C+QDLE G++ L + LI+ RVS+LNI
Sbjct: 244 SLQMED---------------VQNLESCIQDLEDGIESLSKSLIKYRVSILNI 253

[Close]

BLAST of Lsi10G008250.1 vs. TAIR10
Match: AT2G17070.1 (AT2G17070.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 98/293 (33.45%), Postives = 163/293 (55.63%), Query Frame = 1


Query: 6   NYHARSNSLPTRPHPLVTECDEHLCRLKALD-SGPWTASGMAKKLAGLQDLQECVNKLLL 65
           ++H RS+S P+ PHP     DE L RL++ + +   ++S + ++L  LQ+L E ++KL+ 
Sbjct: 4   SFHVRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQELHESLDKLIR 63

Query: 66  LRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWC 125
           L  T+ A   ++ +K V+++ DGSL++LD+C+ SKD +   KE + E+QS++RR+     
Sbjct: 64  LPVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSILRRKRGD-- 123

Query: 126 CGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISIKDAETVALITLLFDVEVA 185
               ++ +V+KYLASRK  K+  QK   S+K   A+ +    KD      + +  + E  
Sbjct: 124 ----LSGEVKKYLASRKSFKKTFQKVQKSLKAAQAEDN----KDKS----LAVFGEAEAV 183

Query: 186 SVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAAVDTV 245
           ++ +F++L SY+ G K  SK   W++VSKLM  K+        E + NEF  VD+   + 
Sbjct: 184 TIAMFDSLFSYMSGSKTCSK---WSVVSKLMNKKKI-----TCEAQENEFTKVDSEFQSE 243

Query: 246 ASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLN 298
            +    D  +               LE+C+QD E GL+ L + LI+ RVS+LN
Sbjct: 244 KTLKMEDVQI---------------LESCIQDFEDGLESLSKSLIKYRVSILN 259

[Close]

BLAST of Lsi10G008250.1 vs. TAIR10
Match: AT4G35690.1 (AT4G35690.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 109.8 bits (273), Expect = 3.0e-24
Identity = 87/299 (29.10%), Postives = 154/299 (51.51%), Query Frame = 1


Query: 10  RSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVNKLLLLRRTR 69
           RS SLP+  HP  T  +E L ++K +++   ++  +   L GL++L  C    L +  T+
Sbjct: 11  RSISLPSSSHPSTTGIEESLNKVKTINTMTGSSESVLMGLEGLEELYNCTEDFLKMGSTQ 70

Query: 70  DAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSWCCGNGV 129
              ++    ++++E+ DGSLRL+D+CS S+D ++ T+E VR +QS VRR+        G 
Sbjct: 71  RVMSSSDGSEFMEEMLDGSLRLMDICSVSRDLMVETQEHVRGVQSCVRRKKVV-----GG 130

Query: 130 ANQ----VEKYLASRKVVKRAIQKALASVKTY-GAKPSLISIKDAETVALITLLFDV--E 189
            +Q    V  Y+  RK +++  ++ L S+K   G   S  S+ + E    + ++ D   +
Sbjct: 131 EDQLDVAVAGYVGFRKNMRKEAKRLLGSLKNIDGGLSSSSSVNNGEQEEHLVVVVDAMRQ 190

Query: 190 VASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAAVD 249
           V SV+V   L S++    G+ + +  + ++ +++ K+    EE      NE   +D  ++
Sbjct: 191 VVSVSV-AVLRSFLEFLSGRRQSNIKSKLASVLKKKKVHHVEE----TKNELENLD--LE 250

Query: 250 TVASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNIINN 302
              SR               +  +L ++E  +   E  L+GLFRRLIR R SLLNII++
Sbjct: 251 IFCSR-------------NDLQKKLEEVEMSIDGFEKKLEGLFRRLIRTRASLLNIISH 284

[Close]

BLAST of Lsi10G008250.1 vs. NCBI nr
Match: gi|659094947|ref|XP_008448320.1| (PREDICTED: uncharacterized protein LOC103490547 [Cucumis melo])

HSP 1 Score: 557.4 bits (1435), Expect = 1.6e-155
Identity = 282/301 (93.69%), Postives = 290/301 (96.35%), Query Frame = 1


Query: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVN 60
           MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKA+DS PWTASGMA KLAGLQDLQECVN
Sbjct: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTASGMANKLAGLQDLQECVN 60

Query: 61  KLLLLRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120
           KLLLLRRTRDAFA QRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS
Sbjct: 61  KLLLLRRTRDAFAAQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120

Query: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISIKDAETVALITLLFD 180
           SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPS ISIKD ET+ALITLLFD
Sbjct: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSSISIKDTETIALITLLFD 180

Query: 181 VEVASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAA 240
           VEVASVNVFEALLSYVLGKKGK+KGSGW LVSKLMRSKR  LTE+GAEGE NEFATVDAA
Sbjct: 181 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATVDAA 240

Query: 241 VDTVASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNIIN 300
           VD VASRLASD T++GGGG+ESMGDQLGKLEACVQDLEGGL+GLFRRLIRNRVSLLNIIN
Sbjct: 241 VDVVASRLASDSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNIIN 300

Query: 301 N 302
           N
Sbjct: 301 N 301

[Close]

BLAST of Lsi10G008250.1 vs. NCBI nr
Match: gi|449444560|ref|XP_004140042.1| (PREDICTED: uncharacterized protein LOC101209279 [Cucumis sativus])

HSP 1 Score: 547.0 bits (1408), Expect = 2.1e-152
Identity = 278/302 (92.05%), Postives = 288/302 (95.36%), Query Frame = 1


Query: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASGMAKKLAGLQDLQECVN 60
           MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKA+DS PWTA GMA KLAGLQDLQECVN
Sbjct: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKAMDSAPWTAFGMANKLAGLQDLQECVN 60

Query: 61  KLLLLRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120
           KLLLLRRTRDAFA  RREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS
Sbjct: 61  KLLLLRRTRDAFAAHRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRS 120

Query: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISIKDAETVALITLLFD 180
           SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGA+PS ISIKD ET+ALITLLFD
Sbjct: 121 SSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGARPSSISIKDTETIALITLLFD 180

Query: 181 VEVASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAA 240
           VEVASVNVFEALLSYVLGKKGK+KGSGW LVSKLMRSKR  LTE+GAEGE NEFAT+DAA
Sbjct: 181 VEVASVNVFEALLSYVLGKKGKAKGSGWALVSKLMRSKRVLLTEDGAEGEANEFATIDAA 240

Query: 241 VDTVASRLASD-GTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNII 300
           VD VASRLASD  T++GGGG+ESMGDQLGKLEACVQDLEGGL+GLFRRLIRNRVSLLNII
Sbjct: 241 VDVVASRLASDSSTIIGGGGIESMGDQLGKLEACVQDLEGGLEGLFRRLIRNRVSLLNII 300

Query: 301 NN 302
           NN
Sbjct: 301 NN 302

[Close]

BLAST of Lsi10G008250.1 vs. NCBI nr
Match: gi|1009150627|ref|XP_015893119.1| (PREDICTED: uncharacterized protein LOC107427255 [Ziziphus jujuba])

HSP 1 Score: 275.0 bits (702), Expect = 1.5e-70
Identity = 160/301 (53.16%), Postives = 209/301 (69.44%), Query Frame = 1


Query: 5   SNYHARSNSLPTRPHPLVTECDEHLCRLKALDSGPWTASG---MAKKLAGLQDLQECVNK 64
           S YH RSNSLPTRPHPL+  C+ HLCRL A D    T+S    ++ KL+GL+DL +CV+K
Sbjct: 11  SQYHVRSNSLPTRPHPLIQLCNTHLCRLGASDGTSSTSSSSSSISHKLSGLEDLHDCVDK 70

Query: 65  LLLLRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSS 124
           LLLL  T+ AF   R EKWVDE+ DGSLRLLD CSA+KD V+HTKEC RE+QS++R R  
Sbjct: 71  LLLLPLTQKAFVQGRNEKWVDELLDGSLRLLDACSAAKDAVLHTKECAREVQSIIRTRRG 130

Query: 125 SWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISIKDAETVALITLLFDV 184
                 G+ ++V KYLASRKV+K+A+ KAL ++K    K S +S KD ETVAL+ +L +V
Sbjct: 131 G---EGGLVSEVRKYLASRKVMKKAVSKALGNLKGVRTKCS-VSSKDNETVALVGVLREV 190

Query: 185 EVASVNVFEALLSYVLGKKGKSKGSGWTLVSKL-MRSKRAFLTEEGAEGETNEFATVDAA 244
           E  ++ VFE+LLS+  G K  SK SGW+LVS L M SK+    EE  E + NEFA VDAA
Sbjct: 191 EAVTLAVFESLLSFTSGTKAGSKLSGWSLVSNLVMNSKKVGCDEE--ETDANEFAKVDAA 250

Query: 245 VDTVASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNIIN 302
           + ++     ++ +      +E++  +L KLE CVQDLEG L+ +FRRLI+ RVSLLNI+N
Sbjct: 251 LQSLLC-YDTEKSEQYNPQVENVRSELQKLELCVQDLEGRLEYIFRRLIKIRVSLLNILN 304

[Close]

BLAST of Lsi10G008250.1 vs. NCBI nr
Match: gi|657980968|ref|XP_008382492.1| (PREDICTED: uncharacterized protein LOC103445280 [Malus domestica])

HSP 1 Score: 271.2 bits (692), Expect = 2.2e-69
Identity = 152/303 (50.17%), Postives = 212/303 (69.97%), Query Frame = 1


Query: 1   MGGSSNYHARSNSLPTRPHPLVTECDEHLCRLKALD-SGPWTASGMAKKLAGLQDLQECV 60
           +   SNYH RS SLP++PHPL  +C++HL R+ A D S  +++S ++ +L+ L DL  CV
Sbjct: 7   LNSKSNYHIRSISLPSKPHPLFQQCEDHLLRIAASDVSSSFSSSSISHRLSSLLDLHNCV 66

Query: 61  NKLLLLRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRR 120
           N+L  L  T++AF  +R EKWVDE+ DGSLRLLD+C+A+KD +IHTKECVRE+QS++RRR
Sbjct: 67  NELFQLPLTQEAFVRERNEKWVDELLDGSLRLLDVCTAAKDALIHTKECVREIQSIMRRR 126

Query: 121 SSSWCCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISI-KDAETVALITLL 180
                  +G  N+V KY ASRKVVK+AI KAL ++++   K +  S  KD   VALI  L
Sbjct: 127 RGGI---SGFTNEVRKYSASRKVVKKAICKALGTLRSSQKKGTFSSTNKDNVAVALIGAL 186

Query: 181 FDVEVASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVD 240
            +VE  ++ VFE+LLS++ G K +SK SGW+ VSKLM +K+    EE  + + NEFA VD
Sbjct: 187 REVEAVTLTVFESLLSFISGAKSQSKMSGWSFVSKLMLTKKVACDEED-KADLNEFADVD 246

Query: 241 AAVDTVASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNI 300
           AA+++++ + AS    V     E++  +L +LE C QDLE GL+GLFRRLI+NRVSLLN 
Sbjct: 247 AALNSLSCQEASKSDNVVDS--ENVQSELQQLELCSQDLEEGLEGLFRRLIKNRVSLLNT 303

Query: 301 INN 302
           ++N
Sbjct: 307 LSN 303

[Close]

BLAST of Lsi10G008250.1 vs. NCBI nr
Match: gi|658049962|ref|XP_008360689.1| (PREDICTED: uncharacterized protein LOC103424386 [Malus domestica])

HSP 1 Score: 269.2 bits (687), Expect = 8.5e-69
Identity = 152/299 (50.84%), Postives = 208/299 (69.57%), Query Frame = 1


Query: 5   SNYHARSNSLPTRPHPLVTECDEHLCRLKALD-SGPWTASGMAKKLAGLQDLQECVNKLL 64
           SNYH RS SLP++PHPL  +C++HL R+ A D S  +++S ++ +L+ L DL  CVNKL 
Sbjct: 11  SNYHVRSISLPSKPHPLFQQCEDHLLRIAASDVSSSFSSSSISHRLSDLLDLHNCVNKLF 70

Query: 65  LLRRTRDAFATQRREKWVDEVFDGSLRLLDLCSASKDGVIHTKECVRELQSLVRRRSSSW 124
            L   ++AF  +R EKWVDE+ DGSLRLLD+C+A+KD +IHTKECVRE+QS++RRR    
Sbjct: 71  QLPLAQEAFVRERNEKWVDELLDGSLRLLDVCTAAKDALIHTKECVREIQSIMRRRRGG- 130

Query: 125 CCGNGVANQVEKYLASRKVVKRAIQKALASVKTYGAKPSLISI-KDAETVALITLLFDVE 184
              +G  N+V KY ASRKVVK+AI KAL ++++   K +  S  KD   VALI  L +VE
Sbjct: 131 --KSGFTNEVRKYSASRKVVKKAICKALGTLRSSQKKCTFSSTNKDNVAVALIGALREVE 190

Query: 185 VASVNVFEALLSYVLGKKGKSKGSGWTLVSKLMRSKRAFLTEEGAEGETNEFATVDAAVD 244
             ++ VFE+LLS++ G K +SK SGW+ VSKLM +K+    E+   G  NEFA VDAA++
Sbjct: 191 AVTLTVFESLLSFISGAKSQSKMSGWSFVSKLMLTKKVACDEDDKTG-INEFADVDAALN 250

Query: 245 TVASRLASDGTVVGGGGLESMGDQLGKLEACVQDLEGGLDGLFRRLIRNRVSLLNIINN 302
           ++  + AS    +  G  E+M  +L +LE C QDLE GL+ LFRRLI+NRVSLLN ++N
Sbjct: 251 SLVCQEASKSDNMVDG--ENMQSELQQLELCSQDLEEGLESLFRRLIKNRVSLLNTLSN 303

The following BLAST results are available for this feature:

BLAST of Lsi10G008250.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G008250.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG43_CUCSA	1.5e-152	92.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127330 PE=4 SV=1	[more]
M5VME9_PRUPE	1.0e-68	49.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025877mg PE=4 SV=1	[more]
W9S9W8_9ROSA	1.7e-68	50.00	Uncharacterized protein OS=Morus notabilis GN=L484_014368 PE=4 SV=1	[more]
W9RKX3_9ROSA	2.9e-68	51.32	Uncharacterized protein OS=Morus notabilis GN=L484_014372 PE=4 SV=1	[more]
W9RW89_9ROSA	1.2e-66	48.99	Uncharacterized protein OS=Morus notabilis GN=L484_014365 PE=4 SV=1	[more]

BLAST of Lsi10G008250.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17080.1	2.3e-40	35.35	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35210.1	5.7e-39	35.71	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35200.1	1.7e-38	34.47	Arabidopsis protein of unknown function (DUF241)	[more]
AT2G17070.1	1.4e-37	33.45	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35690.1	3.0e-24	29.10	Arabidopsis protein of unknown function (DUF241)	[more]

BLAST of Lsi10G008250.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094947\|ref\|XP_008448320.1\|	1.6e-155	93.69	PREDICTED: uncharacterized protein LOC103490547 [Cucumis melo]	[more]
gi\|449444560\|ref\|XP_004140042.1\|	2.1e-152	92.05	PREDICTED: uncharacterized protein LOC101209279 [Cucumis sativus]	[more]
gi\|1009150627\|ref\|XP_015893119.1\|	1.5e-70	53.16	PREDICTED: uncharacterized protein LOC107427255 [Ziziphus jujuba]	[more]
gi\|657980968\|ref\|XP_008382492.1\|	2.2e-69	50.17	PREDICTED: uncharacterized protein LOC103445280 [Malus domestica]	[more]
gi\|658049962\|ref\|XP_008360689.1\|	8.5e-69	50.84	PREDICTED: uncharacterized protein LOC103424386 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004320	DUF241_pln

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi10G008250	Lsi10G008250	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G008250.1.five_prime_UTR.1	Lsi10G008250.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G008250.1.CDS.1	Lsi10G008250.1.CDS.1	CDS
Lsi10G008250.1.CDS.2	Lsi10G008250.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G008250.1.three_prime_UTR.1	Lsi10G008250.1.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi10G008250.1	Lsi10G008250.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004320	Protein of unknown function DUF241, plant	PFAM	PF03087	DUF241	coord: 48..298 score: 8.5
None	No IPR available	PANTHER	PTHR31509	FAMILY NOT NAMED	coord: 5..300 score: 1.2E
None	No IPR available	PANTHER	PTHR31509:SF12	SUBFAMILY NOT NAMED	coord: 5..300 score: 1.2E