Lsi10G007860.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi10G007860.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr10 : 10692604 .. 10696840 (+)
Sequence length399
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTGATTGATTTATTGTTGTAGGTAGAGATTTGGAGTTTAGGAGGCCATAGTTTTGTTTGGGGACCAGGGATTCACATCACCCAATCACCTTTCTTTTCCAAGGGTTTACTACAGAACCTTTTACCACAATTATGGTTTTCTTATAAGTTATTCCCGCCCAGAATCACTCTCTTTTCCAACATTCTGGTGCATTTGTTATTCTTTTCCTCCACTGAGGTAGAGACTTCGGAAGAGGTATTCTTATTCCTTTCCTCACGCCTTGGATGAAAGATGGCAATTTGCTGAAGTGATCTTTTAGATTCCTTTGCACCATACTAATCATTCATTACAAGTAAAGGTAATCGAAAGGACCAACAGCCAAAAAAGTTAAAAAGGAATGGGCTGTCTCTTGAGCTTTTCAAACATGCATATTTTGTATAGCTTTAATATCAACTGCCTTCTAGAATATAAAAACAAATAATGATAATAGTCCCTACAATAAAAGATGAGTAAAAGGGAGCGGAGAATGCATTACTGTGTAAAGGGCAATTCCAACTAGTAACCAAGCCATACCAAAGTCAATAATACACATTGAGAGATATTTAACTACCGAATTGATTGATGTCAGGACCACAAATAGCAAAAAAGATTAAAATGTTATGCAATTAAAGAAAACTTGAGGCTGCTATAAACTTTGAAGCCTATTATCACAAAGCACATTTGGTCTGCGATGAAGGTGATCACTAGAGATACTTCCTTGCGAGTGCACGAACTTTTGTGTCGAAATGTGAAGATGTGATGCGGGATCCAGGCAAGTAGAGGGGATTGAGTATAGTCTGCAAATTCACAAAGCCAATTTCAGTCATGTACATCATCAAGCTGACAATTGTCACCTAATGAAAACCCATGGCAACAATAGAGAAAAAATATCTGGAAGACAACAAGGTCGATGCCACAGCCATTCATTGAAAACATGGGGAACACAGAAAAGACCAAAACCCACCAACTAACAAATGGTTACCCAGCGTTTAGCTGTCTTGAATTAATTAACTTAGAATTCTTCCAATAGATGAGAATCAAGAAAGCTGAAAAATCACATCCAACGAAATACTTCGCTATGAAGAATTATATACAGCGGAAATTGGCAGGAATCAAGAGCTTAGGACCCTTGTCGTTGCCTAAAATGGAATGGACAATATCATGAAATTATATTATAAGTAACTCCTGTCAAAATCTTTGCAAAAACAATGTTGCATCTTCCATGAAGTTTCAAAAATTAGAGAGTAGACTGAAAATGATCAAACCAAAGTACCAAACCTTCTATTTATCTACTGTTATGGTAAACATGAAAATTGAAATTTAAGGTCTTGAAATCCTAGCTTGATGAAACTTACAAAATTTGATAGGAATACTAACTAAGATGATGCACTAAAAGCCAAAAGAGTATAATAATCAACTAAGGAGAGTAGTCAACAGAAGTTTTCATATGGGGAAAATTGAACTAGAAATAGAATCATCAAGGAAAGTTTAAATTATAGTTGCATAATAGCTGACTAAAGGCATAGCCTACATTGACTGGGAAATTTTGCCAATAGAACGTAAGTAGTGCTGGGGATGGGAGGCACTCAGGAGCCTACTATTATGATAGCAGTTACACATAAGCAGATCAACAATTACACTCCCCTCTTGACACCACTTTTCTTCTATTCAAACAGAAACTCTTGTTGATTTCTTAGGGAGGGGAAAAAGTCTTATTGGCTAATGAAAGAAAAAAATCTACAATAGAAAAAAAAATATATCAACAAAATCGCTAATCAGGAGAAGATGACAGACAAGTTCACATGAAATATTTATCACTTATTCTAGGCCATTTTGTCTGTGGTGCAATCATGTCAAAGCATAACGCTAAAGGACACTTCAGAGGGAATTAAATCTTGGTATGTCCCAAATATAGTTTTTCTACAAATAGTTCATTCAGCAACTAAATTATTATGATTAAATCTTATTAAAAACCCACTAGATAATCATTAACAATATTTTGTAACTCTACCACATGATTTCAAGTTATTCTATCAATTTATTTCCAAAAACCTATTAATCTTCCTAGAAGATATAGGTCACAATCCAGTGCTACAGAAACAATAATAACACGTAGGAGGGATCTATTGGAGCCTTAAATCTGAGCATCCTGACATGACTAAACAACAAGGGATCTCAAAAGGATAAACCACCCTCACAACCCCCATCTCATGCTTCATGCCAGCTCATGATGACAACCTGATCTCATAACAAATCAACCAGTTACACCTTTTTTATGAATATATACAATCAAGACTCAAGGGATACGATTTTTTTTTTCTTTTAGTTCAGCAATTGTGGAGTGAGAAATCAAACCATCGACTTTTGAGATGGTAACTAGTGCCTTTTATCTATATGCTCATATTGGTTTGATACAATTTATTTATTTAACAACTGAACCGTTTCAAAGGTCAAAGTGTTATTGAGTAAAAAAAATATAACTCCATTGAGTAAGAACCTTTTTTAAAAAAAGATAATGCAAGCACTTTCATTGAGAAAAAATATTAAAAGATACAAGGGCATATGACCTTTCTCACAAAAAGGACGATGGAGGAGGAACTTTCCGATCATAACACTAATGTCCCTTTGACGGGCAACCACAAAACCAAATTTCTGGAAGAACAAATTCCAGACAAAGTGTGCAAACTCACATCTCCAAAGGATGTGATCCAGGTCTTCTTCCAGCTTTCGACATAATACAAAAAAGGGCCCCAAGGACAACATCCTCTTCCACCTCGAGAGCCAATACAAGGTGTTCACATGTCCATGTAGAACTTGCCAAGTAAAGAATCTCTCCTTCTTAGGAATCTTAATCCTCTAAAGGGCTGAAAAAAACATACGAAAGGAGAAGGGTCCAACAGCCAACAAAAAAAGGAATTAGGAGAATCCCTCCAGAGGGTCGAGATTCCAGACATGCAGATCCTTTCTCCCACACCTAAAGTTAAACTCTCCCAACGACAACAAAGAGATGACATTTGTCGCTTTCCTATCAGTGAAAGAGCGATTAAACCTGAAGGAAAAGGAAACCAAGCTTCCCAACCAAATAAAAATGTCAAACACAAAATGATTTTTAAAGAAGCATAAATGATAAATATGGGGAAATGGAAGCAAAGAGGTTATCCCCAACCAATGATCATCCCACAAATACGTTTCCTACCCCTCCCCTACCACACGGCAGACAAAATGGGAAAGAGGGGAGCTCGTTAGAAATATCCTTCCACAAGTTCTAGTTGGTGCCTCTAACCCCACCCGACAACCACTCAGAGGGATGAGGCCCATACTTGCTAGCAATATCCTTGTGCCAAAGGGTATTAGAATCTAGAGCAAAATGGCAAAGCCATTTAGCTAATAGGGTTTTGTTATGAGTCCTTAAGTCACCACTTTTTAATTGCCCGGTTCACCGATCTCCCATCTAACCCAGTGCAATCCATTTCCTTCTTCCACCTCTTCCCAAAGGAATTTAAACATAAGTTTTTCAATGTCCTTGCAAACCTTACTAGGGATCCAAACAAAGAAAAGAAGTAAATGGGAATGCCACTCAAAACTGACCGAATCAAAGCATATCTCCCAGCTTTGGAAAAGTAACTTAATCAACTAAGGAATACTTCGATCAACCTAAATAATATAATATAGTAAATCAAGCACCATACTCCCCAACCCGACATGTTCTTGAACTAAAAAAAAATCAAGCACCACACCTTCAACAGTTGCCAATAGCAGTAATAATACATAAGAAGCATGTCCAACTTACCTTTATGTAAAGCTCATGAACCTCTTGAAAAAAGCTCTTGATTCCATCATCATTGCGAGAGTCGTGAAGTAACATCAATCGCGTATGTAGTGAATAGTCAAAGAAAATCAGAATATTGGTATAAAAGGAAACAATAGGAACTATGAACCGAAATTAATCTCTCAAACGTATATAGAATGCCAGAATCATAGTAAAACATGCGTCCCGTACAATGACAAAATTTGATTGCAGATTCCATCAATCAATATACTTTAGTAATGCAAAGATTCAAAGATAAAACTTTTATTAATTTAGAGTTGAGATTTACGAGTGAGTGAATTAATGAAATTTGACTCAATTTCCAGCACAGTGTGCTTGACAAATCCCCTCGACATTAAAGGATATGACCGGCGGTTACATAGACAGACACCACCAAATCATTGA

mRNA sequence

ATGGCTGTAGAGATTTGGAGTTTAGGAGGCCATAGTTTTGTTTGGGGACCAGGGATTCACATCACCCAATCACCTTTCTTTTCCAAGGGTTTACTACAGAACCTTTTACCACAATTATGGTTTTCTTATAAGTTATTCCCGCCCAGAATCACTCTCTTTTCCAACATTCTGGTGCATTTGTTATTCTTTTCCTCCACTGAGGTAGAGACTTCGGAAGAGATGAGAATCAAGAAAGCTGAAAAATCACATCCAACGAAATACTTCGCTATGAAGAATTATATACAGCGGAAATTGGCAGGAATCAAGAGCTTAGGACCCTTCACAGTGTGCTTGACAAATCCCCTCGACATTAAAGGATATGACCGGCGGTTACATAGACAGACACCACCAAATCATTGA

Coding sequence (CDS)

ATGGCTGTAGAGATTTGGAGTTTAGGAGGCCATAGTTTTGTTTGGGGACCAGGGATTCACATCACCCAATCACCTTTCTTTTCCAAGGGTTTACTACAGAACCTTTTACCACAATTATGGTTTTCTTATAAGTTATTCCCGCCCAGAATCACTCTCTTTTCCAACATTCTGGTGCATTTGTTATTCTTTTCCTCCACTGAGGTAGAGACTTCGGAAGAGATGAGAATCAAGAAAGCTGAAAAATCACATCCAACGAAATACTTCGCTATGAAGAATTATATACAGCGGAAATTGGCAGGAATCAAGAGCTTAGGACCCTTCACAGTGTGCTTGACAAATCCCCTCGACATTAAAGGATATGACCGGCGGTTACATAGACAGACACCACCAAATCATTGA

Protein sequence

MAVEIWSLGGHSFVWGPGIHITQSPFFSKGLLQNLLPQLWFSYKLFPPRITLFSNILVHLLFFSSTEVETSEEMRIKKAEKSHPTKYFAMKNYIQRKLAGIKSLGPFTVCLTNPLDIKGYDRRLHRQTPPNH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi10G007860Lsi10G007860gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi10G007860.1.CDS.1Lsi10G007860.1.CDS.1CDS
Lsi10G007860.1.CDS.2Lsi10G007860.1.CDS.2CDS
Lsi10G007860.1.CDS.3Lsi10G007860.1.CDS.3CDS
Lsi10G007860.1.CDS.4Lsi10G007860.1.CDS.4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi10G007860.1Lsi10G007860.1-proteinpolypeptide