Lsi10G004560.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G004560.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SAUR-like auxin-responsive protein family
Location	chr10 : 6633304 .. 6633597 (+)
Sequence length	294

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTGTGTCAACCAGAAATCAGTCTGATGTTCCCAAAGGTCATATTGCAATTTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATTTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGCGGCTTGTCAATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACAGATCATGA

mRNA sequence

ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTGTGTCAACCAGAAATCAGTCTGATGTTCCCAAAGGTCATATTGCAATTTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATTTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGCGGCTTGTCAATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACAGATCATGA

Coding sequence (CDS)

ATGGGAATCCGTTTGCCATCGATTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTGTGTCAACCAGAAATCAGTCTGATGTTCCCAAAGGTCATATTGCAATTTATGTGGGAGAGATTCAAAGGAAGAGATTTGTGGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATTTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGCGGCTTGTCAATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACAGATCATGA

Protein sequence

MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS

Homology

[Close]

BLAST of Lsi10G004560.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.7e-24
Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL   A +    S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLSIPCREDAFINLTARLH 96
          FGF HPMGGL+IPC ED FIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Lsi10G004560.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.7e-24
Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 1


Query: 9  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VPISYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLSIPCREDAFINLTARLHR 97
          FGF HPMGGL+IPC ED FIN+T+R  R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of Lsi10G004560.1 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.5e-24
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSR---STAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLSIPCREDAFINLTARL 95
          FGF HPMGGL+IPC ED FIN+T+RL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lsi10G004560.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.8e-24
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSR---STGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLSIPCREDAFINLTARL 95
          FGF HPMGGL+IPC ED FIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lsi10G004560.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23
Identity = 53/86 (61.63%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SE+E
Sbjct: 7  LLGAKKILSR---STAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFCHPMGGLSIPCREDAFINLTARL 95
          FGF HPMGGL+IPC ED FIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Lsi10G004560.1 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.3e-45
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILLNAKQILKMQA+S RNQ DVPKGHIA+YVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS 98
          LLNRSEEEFGFCHPMGGL+IPCREDAFINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Lsi10G004560.1 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.3e-45
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRL SILLNAKQILKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS 98
          LLNRSEEEFGFCHPMGGL+IPCREDAFINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Lsi10G004560.1 vs. TrEMBL
Match: A0A0A0LJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 4.6e-39
Identity = 78/90 (86.67%), Postives = 84/90 (93.33%), Query Frame = 1


Query: 8   ILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 67
           +L  +  +LKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVDLLNRSEE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFCHPMGGLSIPCREDAFINLTARLHRS 98
           EFGFCHPMGGL+IPCREDAFINLTARLH S
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

[Close]

BLAST of Lsi10G004560.1 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.3e-37
Identity = 72/97 (74.23%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIR+PS+LLNAKQI +MQ+VSTR  S++PKGHIA+YVGEI+RKRFVVP+SYL HP+F+ 
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS 98
          LLNR+EEEFGF HP GGL+IPC+EDAFI+LT++LH S
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of Lsi10G004560.1 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.3e-37
Identity = 75/97 (77.32%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPS+LL+AKQILKM+ VSTR QSDVPKGHI +YVGE QRKRF+VPISYL HPSFV+
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS 98
          LL+R+EEEFGF HP GGL+IPC+E+AFI++T+RLH S
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004560.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.6 bits (296), Expect = 2.1e-27
Identity = 55/99 (55.56%), Postives = 75/99 (75.76%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILK----MQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHP 60
          M IR+P +L ++KQIL+    + + S+ +  DVPKG++A+YVGE   KRFVVP+SYL  P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLH 96
          SF DLL ++EEEFGF HPMGGL+IPC E+ FI+L +R +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Lsi10G004560.1 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-26
Identity = 54/98 (55.10%), Postives = 75/98 (76.53%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEI-QRKRFVVPISYLKHPSFV 60
          M IR+  +L ++KQ+LK  + S+ N + +PKGH+A+YVGE+ Q++RFVVP++YL HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 DLLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS 98
           LL ++EEEFGF HPMGGL+IPC E  FI+L +RL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Lsi10G004560.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26
Identity = 55/101 (54.46%), Postives = 76/101 (75.25%), Query Frame = 1


Query: 1   MGIRLPSILLNAKQILKMQAVSTRNQSD------VPKGHIAIYVGE---IQRKRFVVPIS 60
           MG+   +I    KQILK+ +++ RN++       VPKGH+A+YVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLKHPSFVDLLNRSEEEFGFCHPMGGLSIPCREDAFINLTA 93
           +L HPSF + L+R+EEEFGF HPMGGL+IPCRE+ F++L A
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIA 101

[Close]

BLAST of Lsi10G004560.1 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25
Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 1


Query: 9  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL     ST   S  PKG +A+YVGE Q+KR++VPISYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLSIPCREDAFINLTARLHR 97
          FGF HPMGGL+IPC ED FIN+T+R  R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of Lsi10G004560.1 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25
Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL   A +    S  PKG +A+YVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLSIPCREDAFINLTARLH 96
          FGF HPMGGL+IPC ED FIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Lsi10G004560.1 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 2.5e-46
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILLNAKQ+LKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS 98
          LLNRSEEEFGFCHPMGGL+IPCREDAFINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Lsi10G004560.1 vs. NCBI nr
Match: gi|778669611|ref|XP_011649277.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 6.1e-45
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILLNAKQILKMQA+S RNQ DVPKGHIA+YVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS 98
          LLNRSEEEFGFCHPMGGL+IPCREDAFINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Lsi10G004560.1 vs. NCBI nr
Match: gi|659115604|ref|XP_008457639.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 6.1e-45
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILLNAKQ+LKMQA+S RNQSDVPKG+IA+YVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS 98
          LL RSEEEFGFCHPMGGL+IPCREDAFINLTARLH S
Sbjct: 61 LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Lsi10G004560.1 vs. NCBI nr
Match: gi|700206767|gb|KGN61886.1| (hypothetical protein Csa_2G258820 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 1.0e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRL SILLNAKQILKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLSIPCREDAFINLTARLHRS 98
          LLNRSEEEFGFCHPMGGL+IPCREDAFINLTARLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Lsi10G004560.1 vs. NCBI nr
Match: gi|700206766|gb|KGN61885.1| (hypothetical protein Csa_2G258810 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 6.5e-39
Identity = 78/90 (86.67%), Postives = 84/90 (93.33%), Query Frame = 1


Query: 8   ILLNAKQILKMQAVSTRNQSDVPKGHIAIYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 67
           +L  +  +LKMQA+S RNQSDVPKGHIA+YVGEIQRKRFVVPISYLKHPSFVDLLNRSEE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFCHPMGGLSIPCREDAFINLTARLHRS 98
           EFGFCHPMGGL+IPCREDAFINLTARLH S
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

The following BLAST results are available for this feature:

BLAST of Lsi10G004560.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	2.7e-24	62.07	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU20_ARATH	2.7e-24	62.50	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU19_ARATH	3.5e-24	62.79	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU24_ARATH	7.8e-24	62.79	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	1.0e-23	61.63	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]

BLAST of Lsi10G004560.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM74_CUCSA	4.3e-45	92.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]
A0A0A0LPJ1_CUCSA	7.3e-45	92.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]
A0A0A0LJ03_CUCSA	4.6e-39	86.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	4.3e-37	74.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LM65_CUCSA	7.3e-37	77.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]

BLAST of Lsi10G004560.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	2.1e-27	55.56	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	3.0e-26	55.10	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	4.0e-26	54.46	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.5e-25	62.50	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.5e-25	62.07	SAUR-like auxin-responsive protein family	[more]

BLAST of Lsi10G004560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669614\|ref\|XP_011649278.1\|	2.5e-46	93.81	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669611\|ref\|XP_011649277.1\|	6.1e-45	92.78	PREDICTED: auxin-induced protein X15-like [Cucumis sativus]	[more]
gi\|659115604\|ref\|XP_008457639.1\|	6.1e-45	91.75	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206767\|gb\|KGN61886.1\|	1.0e-44	92.78	hypothetical protein Csa_2G258820 [Cucumis sativus]	[more]
gi\|700206766\|gb\|KGN61885.1\|	6.5e-39	86.67	hypothetical protein Csa_2G258810 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi10G004560	Lsi10G004560	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi10G004560.1.CDS.1	Lsi10G004560.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi10G004560.1	Lsi10G004560.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 3.7
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 2.3
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 2.3