Lsi09G019400.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTAAAATATAAACGGTCATAGAGTAGTCAAAAGTCCCCACCGAATATTCCGTGTTTCGTAAGAAGGAGAAGCAAGAGGGGTAAATTGGGAAAATGAAGCACCGGAAAATCACATAATGAAGCATCGACAACCAGAGATCCTGGTTTGACCGACGTACATTAAAAACCGGCCACGAATGATTGGTTTTGATCCCTCTTTGACCCAACCAAAATTTTCGAAAAACGCCATCTCTAATCTTTTTCCCCCTTTTTAAAACCTAATAATTTCCAACAATCCAAATCCCACACACTCTCTCTTTCTCTCTGTTTCTTAATTTCGTTTGTTTTTTTTTTCTTTTGTTTTTGGATCCACTTTTCTTCTGGGGTTCGTCTATTGAGCTGTTTAGCAGCTGGAGGAGAGAGAAATTTGAGTTTCTCTCTCTTCTGGTGAAATCCCTTTTGTTTTTTCCATTTTTGTTTTGTGCCAATTGCTGAAGAAATCTGTCTTCTGTTTGGGATTTGTTCTTTGAAGGGTGCTTGCTCTTTTTGTGTTTTTGGGGCGAATTAGGGTTTCATCTCTCTGTTGGGGGTTGAGAGGACGCGGCCCTATCTGTAATCACCATGAATGTGATGCGTCGCCTTAAGAGCATTGCTTCTGGTCGGACTTCGATTTCTTCTGACCCTGTGAGTTTCATTTTCATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACGTTTGGGATTCGCTTTCGGTCACATCGGGGAACAACTAGATTAATATTTATTTAATTTCTTTCGTTTTATTCTCATATATATATTCTTTAAAGGAAATGGGTCACTTGGTTCCTCTCTTTGAGTTTATTGATAAATTGGGTTCTTTGTATGCAAATCATTTGATGGGCTTTATTGGTGATCTTCGTTTAAGATCTATGTCGTGGTGCAACATTATGCATTCTTTCCCTTATCATAATTGAGATACTTTCAATGCTATGCTATGGTATTATGATGTTTCACTTTCATCAATTTTGATCTTTTCCTTTTAATCTGTTTTTGAAGGGTGGAGATTTTGGCATAAAGCGAGCAAAAGTTGATCAAGAAACTGAACAAAAGGTTGATGGGGTTTCCGATGATGTCGGAAGAGTTGCCTCTGGTTTAGAGCCGGATTTGGCTTCAACTTCTTTGGATAATGCTGCGAGCACATCAAACATTTCATCAACAGCTGGAGCAGAGAAATCTGGTTTTGATCACCTTCCAAGAGAAATGCGTGAAATGAGAATTAGGGACGAGAAATCCAACCATGATGAAAAGGTTATTCATAGATAACTTCAAATTTAAATATAGCTCTTTGTTTTGTTGTTGTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTCGGGAAAAAAAAATCTCTTTCCGTGTTTTCCCTTTTTTGTAATTCCAATTTCACCCCGTACATTGTAAAATCAACTTTCTATATTGAACTTATATTAGTCGAGATGCGTCTATCTTGTATACTTTGATATCTAGCCCATATGGAAAATGTCTGTGTGATGGACTTGGATACAAGCCATAAAACAGAAACGAGTATTGAGATTCTGTTTACTGTGCTTCTGTTTTAGGATTTGGAACCTGCTGTCGTGAATGGCAATGGAACAGAAGCCGGTCAGATAATTGCAACTACAGTTGGTGGTCGAAATGGAAAACCGAAACAGGTGACTTTTAATAAGCGGCTTATTATATTTCATTTGGGGGCACTTCTCCTCCTCTCTATATCTCCAACTAACACTCTTAATCTCATAGAATAGAAAGTTATGATATATTTTACTGTAACCTTCTCAATCAAATCATGTGGTCTCTGATTTCCTGTAATTGGGGTAGAGTTGTTTGAAAAATTTCTTTCCTATTGTAACTTTGTTGCAGACAATCTCCTATATGGCAGAGCGTGTGGTCGGTACTGGTTCTTTTGGCGTTGTCTTTCAGGTACTTGATTGAATTCTACTGTGCCTGTTCTGGTTCTTTTTAGATCCTGATGTTGGTGCAACTTTTGAATTCACATGTACATTGTTATAGGCTAAGTGTTTGGAAACAAATGAAGCTGTAGCAATAAAAAAGGTGCTACAGGATAAGCGATATAAGAACAGGGAACTCCAGATTATGCGCATTCTTGACCATCCTAACATCGTTCAACTAAAACATTGTTTCTTTTCCACTACTGATAAAGATGAGCTGTACCTCAACCTTGTCCTGGAATATATATCCGAAACTGTCTACAAAGTATCTAAGCATTATATCAGGATGAACCGGAGTATGCCCATTATTTATGTGCAGCTCTATACATATCAGGTAAACTCTCAATCAACAATGAATTGCTGTTGATGGCATTAGTAATATTTTAACTTTCAATTTGTAGTTCTTGCTGGATTTGGCTGTTGCAATTCTACATGTACATTCAGTAACTCCTGTTCTCACTTTTCCAGATTTGCCGGGCTCTAAATTACTTGCATCATGTCGTAGGGGTATGTCACCGTGA GTAAAATATAAACGGTCATAGAGTAGTCAAAAGTCCCCACCGAATATTCCGTGTTTCGTAAGAAGGAGAAGCAAGAGGGGTAAATTGGGAAAATGAAGCACCGGAAAATCACATAATGAAGCATCGACAACCAGAGATCCTGGTTTGACCGACGTACATTAAAAACCGGCCACGAATGATTGGTTTTGATCCCTCTTTGACCCAACCAAAATTTTCGAAAAACGCCATCTCTAATCTTTTTCCCCCTTTTTAAAACCTAATAATTTCCAACAATCCAAATCCCACACACTCTCTCTTTCTCTCTGTTTCTTAATTTCGTTTGTTTTTTTTTTCTTTTGTTTTTGGATCCACTTTTCTTCTGGGGTTCGTCTATTGAGCTGTTTAGCAGCTGGAGGAGAGAGAAATTTGAGTTTCTCTCTCTTCTGGTGAAATCCCTTTTGTTTTTTCCATTTTTGTTTTGTGCCAATTGCTGAAGAAATCTGTCTTCTGTTTGGGATTTGTTCTTTGAAGGGTGCTTGCTCTTTTTGTGTTTTTGGGGCGAATTAGGGTTTCATCTCTCTGTTGGGGGTTGAGAGGACGCGGCCCTATCTGTAATCACCATGAATGTGATGCGTCGCCTTAAGAGCATTGCTTCTGGTCGGACTTCGATTTCTTCTGACCCTGGTGGAGATTTTGGCATAAAGCGAGCAAAAGTTGATCAAGAAACTGAACAAAAGGTTGATGGGGTTTCCGATGATGTCGGAAGAGTTGCCTCTGGTTTAGAGCCGGATTTGGCTTCAACTTCTTTGGATAATGCTGCGAGCACATCAAACATTTCATCAACAGCTGGAGCAGAGAAATCTGGTTTTGATCACCTTCCAAGAGAAATGCGTGAAATGAGAATTAGGGACGAGAAATCCAACCATGATGAAAAGGATTTGGAACCTGCTGTCGTGAATGGCAATGGAACAGAAGCCGGTCAGATAATTGCAACTACAGTTGGTGGTCGAAATGGAAAACCGAAACAGACAATCTCCTATATGGCAGAGCGTGTGGTCGGTACTGGTTCTTTTGGCGTTGTCTTTCAGGCTAAGTGTTTGGAAACAAATGAAGCTGTAGCAATAAAAAAGGTGCTACAGGATAAGCGATATAAGAACAGGGAACTCCAGATTATGCGCATTCTTGACCATCCTAACATCGTTCAACTAAAACATTGTTTCTTTTCCACTACTGATAAAGATGAGCTGTACCTCAACCTTGTCCTGGAATATATATCCGAAACTGTCTACAAAGTATCTAAGCATTATATCAGGATGAACCGGAGTATGCCCATTATTTATGTGCAGCTCTATACATATCAGTTCTTGCTGGATTTGGCTGTTGCAATTCTACATGTACATTCAGTAACTCCTGTTCTCACTTTTCCAGATTTGCCGGGCTCTAAATTACTTGCATCATGTCGTAGGGGTATGTCACCGTGA ATGAATGTGATGCGTCGCCTTAAGAGCATTGCTTCTGGTCGGACTTCGATTTCTTCTGACCCTGGTGGAGATTTTGGCATAAAGCGAGCAAAAGTTGATCAAGAAACTGAACAAAAGGTTGATGGGGTTTCCGATGATGTCGGAAGAGTTGCCTCTGGTTTAGAGCCGGATTTGGCTTCAACTTCTTTGGATAATGCTGCGAGCACATCAAACATTTCATCAACAGCTGGAGCAGAGAAATCTGGTTTTGATCACCTTCCAAGAGAAATGCGTGAAATGAGAATTAGGGACGAGAAATCCAACCATGATGAAAAGGATTTGGAACCTGCTGTCGTGAATGGCAATGGAACAGAAGCCGGTCAGATAATTGCAACTACAGTTGGTGGTCGAAATGGAAAACCGAAACAGACAATCTCCTATATGGCAGAGCGTGTGGTCGGTACTGGTTCTTTTGGCGTTGTCTTTCAGGCTAAGTGTTTGGAAACAAATGAAGCTGTAGCAATAAAAAAGGTGCTACAGGATAAGCGATATAAGAACAGGGAACTCCAGATTATGCGCATTCTTGACCATCCTAACATCGTTCAACTAAAACATTGTTTCTTTTCCACTACTGATAAAGATGAGCTGTACCTCAACCTTGTCCTGGAATATATATCCGAAACTGTCTACAAAGTATCTAAGCATTATATCAGGATGAACCGGAGTATGCCCATTATTTATGTGCAGCTCTATACATATCAGTTCTTGCTGGATTTGGCTGTTGCAATTCTACATGTACATTCAGTAACTCCTGTTCTCACTTTTCCAGATTTGCCGGGCTCTAAATTACTTGCATCATGTCGTAGGGGTATGTCACCGTGA MNVMRRLKSIASGRTSISSDPGGDFGIKRAKVDQETEQKVDGVSDDVGRVASGLEPDLASTSLDNAASTSNISSTAGAEKSGFDHLPREMREMRIRDEKSNHDEKDLEPAVVNGNGTEAGQIIATTVGGRNGKPKQTISYMAERVVGTGSFGVVFQAKCLETNEAVAIKKVLQDKRYKNRELQIMRILDHPNIVQLKHCFFSTTDKDELYLNLVLEYISETVYKVSKHYIRMNRSMPIIYVQLYTYQFLLDLAVAILHVHSVTPVLTFPDLPGSKLLASCRRGMSP
BLAST of Lsi09G019400.1 vs. Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3) HSP 1 Score: 315.5 bits (807), Expect = 6.1e-85 Identity = 174/267 (65.17%), Postives = 210/267 (78.65%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2) HSP 1 Score: 294.3 bits (752), Expect = 1.5e-78 Identity = 164/269 (60.97%), Postives = 198/269 (73.61%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=1 SV=3) HSP 1 Score: 247.3 bits (630), Expect = 2.0e-64 Identity = 125/187 (66.84%), Postives = 149/187 (79.68%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 6.0e-64 Identity = 127/189 (67.20%), Postives = 152/189 (80.42%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.3e-63 Identity = 127/188 (67.55%), Postives = 149/188 (79.26%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TrEMBL
Match: A0A0A0K9N3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G074020 PE=3 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 6.7e-123 Identity = 238/265 (89.81%), Postives = 247/265 (93.21%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TrEMBL
Match: V4TXR7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020026mg PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.3e-101 Identity = 201/266 (75.56%), Postives = 231/266 (86.84%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TrEMBL
Match: A0A067HDX4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011138mg PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.3e-101 Identity = 201/266 (75.56%), Postives = 231/266 (86.84%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TrEMBL
Match: A0A067HDN9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011138mg PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.3e-101 Identity = 201/266 (75.56%), Postives = 231/266 (86.84%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TrEMBL
Match: A0A067H2D7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011138mg PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.3e-101 Identity = 201/266 (75.56%), Postives = 231/266 (86.84%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TAIR10
Match: AT4G00720.1 (AT4G00720.1 shaggy-like protein kinase 32) HSP 1 Score: 315.5 bits (807), Expect = 3.4e-86 Identity = 174/267 (65.17%), Postives = 210/267 (78.65%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TAIR10
Match: AT5G26751.1 (AT5G26751.1 shaggy-related kinase 11) HSP 1 Score: 247.3 bits (630), Expect = 1.2e-65 Identity = 125/187 (66.84%), Postives = 149/187 (79.68%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TAIR10
Match: AT5G14640.1 (AT5G14640.1 shaggy-like kinase 13) HSP 1 Score: 245.7 bits (626), Expect = 3.4e-65 Identity = 127/189 (67.20%), Postives = 152/189 (80.42%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TAIR10
Match: AT3G05840.2 (AT3G05840.2 Protein kinase superfamily protein) HSP 1 Score: 242.7 bits (618), Expect = 2.8e-64 Identity = 126/201 (62.69%), Postives = 153/201 (76.12%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. TAIR10
Match: AT3G61160.2 (AT3G61160.2 Protein kinase superfamily protein) HSP 1 Score: 241.1 bits (614), Expect = 8.3e-64 Identity = 137/265 (51.70%), Postives = 177/265 (66.79%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. NCBI nr
Match: gi|659120398|ref|XP_008460173.1| (PREDICTED: shaggy-related protein kinase theta [Cucumis melo]) HSP 1 Score: 448.7 bits (1153), Expect = 7.4e-123 Identity = 239/265 (90.19%), Postives = 248/265 (93.58%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. NCBI nr
Match: gi|449454478|ref|XP_004144981.1| (PREDICTED: shaggy-related protein kinase theta [Cucumis sativus]) HSP 1 Score: 448.4 bits (1152), Expect = 9.7e-123 Identity = 238/265 (89.81%), Postives = 247/265 (93.21%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. NCBI nr
Match: gi|641867349|gb|KDO86033.1| (hypothetical protein CISIN_1g011138mg [Citrus sinensis]) HSP 1 Score: 376.3 bits (965), Expect = 4.7e-101 Identity = 201/266 (75.56%), Postives = 231/266 (86.84%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. NCBI nr
Match: gi|567905298|ref|XP_006445137.1| (hypothetical protein CICLE_v10020026mg [Citrus clementina]) HSP 1 Score: 376.3 bits (965), Expect = 4.7e-101 Identity = 201/266 (75.56%), Postives = 231/266 (86.84%), Query Frame = 1
BLAST of Lsi09G019400.1 vs. NCBI nr
Match: gi|641867350|gb|KDO86034.1| (hypothetical protein CISIN_1g011138mg [Citrus sinensis]) HSP 1 Score: 376.3 bits (965), Expect = 4.7e-101 Identity = 201/266 (75.56%), Postives = 231/266 (86.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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