Lsi09G016430.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTTCAGTTTCGTCGTCAACGATATGCGCGCCCTGATAAACGCGATCACCACATTGACAATGGTCGAACACATGGTGGATGCGACATTTTCACCGGAAATGTTTTGCCTAATTGCCGATTCATATATTTTCACTGACACCGCCGCCATTGGCCTTCAACTCTGGCCTCCATTCTTCGACCATTACTTCTGCAACAAGCTTCAACGTTCTTGGTTTCTCCTCAACAAGTCTTTCTCTCTTGCCCTAAAATTACAACATTCTGGTTACACTTCTTTGACCTTCTCTGTCCCTAACTCTGAACGTGCCCAACTCAATTTCCAAGGCCCAAATGGTCATTTTCTTTTATTTCCTTTAATTCCCCTCCTGCCCTAATCTTGGGATTCTTCAATAAAATCTTTTTTTCATTTTTTTCATTTCTTTTTTAGGCCTTCTTCGCGAAATTCCTCTCGAATTGGGTTTTACCGACGATCTGATGTACATCGGCAAATTTGATCTCTCTGTTTTTGTTACCATGGATTCTCAACAATTCTCTCGCCTTGTCGCTGGTTATCATAGGTTTGATTACGGTAATAATCTCTAATTATTAAATTTATGTTCAAATATTATTATCATCCGTATATTTTGAAGTTTATTTCATTTATATATATAATTTAATTTCACTTTTTAATTGTTTATTATTATTCACAGTTCATGTTACTGTAACGAGCTCACAAATGATATTCATTTTCGCAATTATGGAACAGACAGTTCTTACAACACGTGTATGTATATTAATTTTGAGGGTATTAATTAATTAATATATATATATGTGTGTGTGTAGTTTAATTATTGTTACATGTAGAATGGAGGATGTATAATTGGAGGTCTTAAAGCACCAAATCAAATTCAATTCACAATCTCTTTAAGACCAGCAAAAGCTTTTTATGATATGGTAAGACAAACGAAGAGGATTTGGATATTCAAGTTATGTAATTCAACCAAAGGTTTAATTACTGCTCCTCTTGGATTGAATGGTCGATTTGTCGCTTTTCTTGTGAAGACATGA ATGCCGTTCAGTTTCGTCGTCAACGATATGCGCGCCCTGATAAACGCGATCACCACATTGACAATGGTCGAACACATGGTGGATGCGACATTTTCACCGGAAATGTTTTGCCTAATTGCCGATTCATATATTTTCACTGACACCGCCGCCATTGGCCTTCAACTCTGGCCTCCATTCTTCGACCATTACTTCTGCAACAAGCTTCAACGTTCTTGGTTTCTCCTCAACAAGTCTTTCTCTCTTGCCCTAAAATTACAACATTCTGGTTACACTTCTTTGACCTTCTCTGTCCCTAACTCTGAACGTGCCCAACTCAATTTCCAAGGCCCAAATGGCCTTCTTCGCGAAATTCCTCTCGAATTGGGTTTTACCGACGATCTGATGTACATCGGCAAATTTGATCTCTCTGTTTTTGTTACCATGGATTCTCAACAATTCTCTCGCCTTGTCGCTGGTTATCATAGGTTTGATTACGTTCATGTTACTGTAACGAGCTCACAAATGATATTCATTTTCGCAATTATGGAACAGACAGTTCTTACAACACGTAATGGAGGATGTATAATTGGAGGTCTTAAAGCACCAAATCAAATTCAATTCACAATCTCTTTAAGACCAGCAAAAGCTTTTTATGATATGGTAAGACAAACGAAGAGGATTTGGATATTCAAGTTATGTAATTCAACCAAAGGTTTAATTACTGCTCCTCTTGGATTGAATGGTCGATTTGTCGCTTTTCTTGTGAAGACATGA ATGCCGTTCAGTTTCGTCGTCAACGATATGCGCGCCCTGATAAACGCGATCACCACATTGACAATGGTCGAACACATGGTGGATGCGACATTTTCACCGGAAATGTTTTGCCTAATTGCCGATTCATATATTTTCACTGACACCGCCGCCATTGGCCTTCAACTCTGGCCTCCATTCTTCGACCATTACTTCTGCAACAAGCTTCAACGTTCTTGGTTTCTCCTCAACAAGTCTTTCTCTCTTGCCCTAAAATTACAACATTCTGGTTACACTTCTTTGACCTTCTCTGTCCCTAACTCTGAACGTGCCCAACTCAATTTCCAAGGCCCAAATGGCCTTCTTCGCGAAATTCCTCTCGAATTGGGTTTTACCGACGATCTGATGTACATCGGCAAATTTGATCTCTCTGTTTTTGTTACCATGGATTCTCAACAATTCTCTCGCCTTGTCGCTGGTTATCATAGGTTTGATTACGTTCATGTTACTGTAACGAGCTCACAAATGATATTCATTTTCGCAATTATGGAACAGACAGTTCTTACAACACGTAATGGAGGATGTATAATTGGAGGTCTTAAAGCACCAAATCAAATTCAATTCACAATCTCTTTAAGACCAGCAAAAGCTTTTTATGATATGGTAAGACAAACGAAGAGGATTTGGATATTCAAGTTATGTAATTCAACCAAAGGTTTAATTACTGCTCCTCTTGGATTGAATGGTCGATTTGTCGCTTTTCTTGTGAAGACATGA MPFSFVVNDMRALINAITTLTMVEHMVDATFSPEMFCLIADSYIFTDTAAIGLQLWPPFFDHYFCNKLQRSWFLLNKSFSLALKLQHSGYTSLTFSVPNSERAQLNFQGPNGLLREIPLELGFTDDLMYIGKFDLSVFVTMDSQQFSRLVAGYHRFDYVHVTVTSSQMIFIFAIMEQTVLTTRNGGCIIGGLKAPNQIQFTISLRPAKAFYDMVRQTKRIWIFKLCNSTKGLITAPLGLNGRFVAFLVKT
BLAST of Lsi09G016430.1 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.6e-72 Identity = 137/245 (55.92%), Postives = 180/245 (73.47%), Query Frame = 1
BLAST of Lsi09G016430.1 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 8.4e-61 Identity = 121/247 (48.99%), Postives = 173/247 (70.04%), Query Frame = 1
BLAST of Lsi09G016430.1 vs. TrEMBL
Match: A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 2.7e-59 Identity = 121/247 (48.99%), Postives = 170/247 (68.83%), Query Frame = 1
BLAST of Lsi09G016430.1 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.5e-20 Identity = 74/246 (30.08%), Postives = 118/246 (47.97%), Query Frame = 1
BLAST of Lsi09G016430.1 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.7e-14 Identity = 65/241 (26.97%), Postives = 117/241 (48.55%), Query Frame = 1
BLAST of Lsi09G016430.1 vs. NCBI nr
Match: gi|659119586|ref|XP_008459734.1| (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo]) HSP 1 Score: 298.1 bits (762), Expect = 1.4e-77 Identity = 143/246 (58.13%), Postives = 187/246 (76.02%), Query Frame = 1
BLAST of Lsi09G016430.1 vs. NCBI nr
Match: gi|778686233|ref|XP_004146827.2| (PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus]) HSP 1 Score: 280.8 bits (717), Expect = 2.3e-72 Identity = 137/245 (55.92%), Postives = 180/245 (73.47%), Query Frame = 1
BLAST of Lsi09G016430.1 vs. NCBI nr
Match: gi|778686236|ref|XP_011652354.1| (PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus]) HSP 1 Score: 271.6 bits (693), Expect = 1.4e-69 Identity = 135/245 (55.10%), Postives = 179/245 (73.06%), Query Frame = 1
BLAST of Lsi09G016430.1 vs. NCBI nr
Match: gi|700191317|gb|KGN46521.1| (hypothetical protein Csa_6G106730 [Cucumis sativus]) HSP 1 Score: 241.9 bits (616), Expect = 1.2e-60 Identity = 121/247 (48.99%), Postives = 173/247 (70.04%), Query Frame = 1
BLAST of Lsi09G016430.1 vs. NCBI nr
Match: gi|778722070|ref|XP_011658399.1| (PREDICTED: uncharacterized protein LOC105435987 [Cucumis sativus]) HSP 1 Score: 241.9 bits (616), Expect = 1.2e-60 Identity = 121/247 (48.99%), Postives = 173/247 (70.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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