Lsi09G002950.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G002950.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Thaumatin-like protein
Location	chr09 : 3048392 .. 3052274 (-)
Sequence length	564

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATGTATGTTCATGATTTTTGAACAAAAATTAAAGCATTTCGAAAAAAAAAAGGAAAAAAAATGGATAAAAATAAAATGATCTAGAATTTAATTTTATTCTTAAATTTATAAAATTAATTCTATTATTTTTGTCCTAAACAAAGTTCAATTATTTCTTTTATGTCATCGATGAGAGGAGGGTTGTTTGGAAGCTATTTTAAAAACAATTTCAGTTTTCTAATATAAGATTTTAAGAAAATATTGATATTTACCCAGAGTTATTATTTTTTTTTTAGAAATATTTACCCAGAGTTATTTGATATAAAATGAACTTTTATTTTAGACTATTAATTTATTATATGCTACGTACACTTTAAATTTAGATAATTGTAATTTTTACCTTGAACTAAAAAGTAAAAAATACATATCGTAATAAACTTTCATTTGAAGAGTGATTAACAAGATCTTACGTAAGGTTTAATGAGTTATAAATAACGCATGTTTTGATAGAAAAGTATAGAAGTTTAAAGAAAACTGACATTAAACTTTTTTTTTCCACTTTAAATTTGTTAAAATTTTGTGAGTTTTATTGAAATGATTTGATTGTCAATTACATAAATCAACTTAATTGTATACATATTAATTTTTATTAAATTAATTCATGGTTTTGACTTTGAGACAGATTTTTACCGAATTACTTTTTGCTAAATCTAGAGTAATTTTTTTTTTTTTTGACAAACTAAATCTAGAGTGAAATTTCATGTAGAGAAAGTTTTAAAAAAAGTCATCTACGTATTAAATTTTTGTCAACATGTCGATATTATTATCTATACATTTTTAAATTTTTATGGATCCGACCTCAACACTAGATTAAATCCACAATTTGATTATATAGTAAAAAATTTATGAAACAAACCAAAAAAGCAACAAAAGGTGATATAATATAAATAATAAATACTTTAAACTTATTTAAATAGCATAAATATTTATATATTAAATTTAAGGAAAATTATTGTGTATAGAAAAAAAACAAAACTAATTACACATATAGAAAAAAGTACCGTCCATGCTTTTCTATTTCCCACTATTTTTTTCTATACGTGTAATTAGTTTTAGTTTTTTTCTATTTTTGAAAAGACCCCTTAATTTAAATAATTTATCCGATTTATTTATATATCATTTTAAAAAATATCTATCATCATCACACTTTATTTTTATATATATATATATATATATATAACAAAATACTCATAAGTGGAATTAGGAGGTGAACCAAGACATATCAACTAGGTTGACACATCCTTAGCACCCTCATCATATTTCAATCCCTGTCTGAATTCACATTTTATCGATATTTCAATCGACATTTCTATAAATTGAGACTTTGACATTTTAAACTCTTAGTACCAAACAAAAAAAAAAAAAAAAATAGTTTTTCCCCAACATGTTTTTATTGGTACATCCTCTCGATGGTCTTTTTTTTTAAAAAATAAAATAAAATAATATAACAATACTAAGGCTTAGTTTTAGATTGGTGTAGCGTTTAAAATGATTGTTGACAGCTGTCATTTAAAAAAAAAAAAAAATTGTGAAAGGAAATAAAATAGTGTTTGGTAAATTTTAATTTTAAATTAGAAAAAACTAGTTAAGGTGTTTAGTAAATTAATACTAAATTTGTAATAGTTATATAAACTAAAGTAAACTTCAATTAATTTATTATAATATGTTTATTTAAAATCTTACTTGATTTAAATTTCAAATAAAATATTGTTTACTTGAATTATTTGATAAAAATTTAAGAAAAGTAATTGTTATAAAAATTGAATGAATTAAAATTTGAAAATAGATATAACAAAATATATTAAAGTATGAAATGATTATAAAATTTGAGATTGGTAAACGATTAGAGAAGGTAGAAGATTTTCAAGAAAGTTAACTCTAAAAGTTGGTATTTATGAACCTTTACATGTTAGATAAAATTAAAAAGTGATTCGGGTAAATTAATATATAATTTGTTTGATTAAATAGTTAAGATTTTCCTATAATCTCTCATTTTACTGGTAATTTTATTACAAATTTTTAACAATCTTTAAAATAGAAAAACAACATCTTCAAAATAATTTTCAAACTTCTAACTTTTAGTGCATCCAATCCACATTGGCATTGGAATATTTTCTATAGTCATGAATAATATTAAAAGTACTAATATATAAACCAAGTGGTATAAAGATTAAAAAAAAAATGTTATTAATAAGTCCACATCTTTATTTGCGGCCAACATTTTATTACTACAAAGTCGTTTATGAATAATATAATAATATAAAAAATGAATCAAACTATTTACGATATAAAAAAATTTACTGTGTATTACTATAGGAAGTAAATAATTTAATATTTTTTTTGTTTATAATAATTTTTTTAATATTTAATTATGGTTCTTGCACTCTTCGTAGACTAGGGGTTTGAAAAGTCTTAATTTAGAAAATTTCCAATCCTCTAGTGGAAATTTGTCATCCAATCATAACTCCTTTTTAATTTAGTGCAAGTGGAACTAATTTTTTTTTTTTTTTTGCTGAAATTAATATAGCCTCCGTAAAATTCACGCAACTCAAAACCTTGTTAAGTGTTTTCCTTTTCCAAAAAGAAAGAAATAAATAAAATCCTTGTTATGACTTTTCTTTGGTGCATCCATCTTCACGAAATTCCTTCAATTAAAAAGAAAAAAATAAAGAAGAAATAAAAGATTTCTCACACGACAAACTATAGTTTTCGACAACTAAATAAACCCTAAGATACGTGCAATAACTAAAGACTACGACTTCATTTTTCATATATATGAAATTAAAAAAATACTTAAATATATCATATACTGCACATCTATTTTTATGCGCATTTCATCGAGATGTTGGTCTAACCACAATTTATTACATAAATGCTCTTTTTATTTTTTTAAAAAAATATTTAAAATTTTTTTTTTATGTTGTGACGTTAGAGTTTATTTAAACAACTTAATATCATGTCCTACTATATATTAATGAATTAATTAATTAAATTAAAGTTGATCATCAACTGCTTGCTATTTTCCTCAATTTCTCTATTATAAAAGTACCATTTGGATCTCTTCAATTCTCCATAGAGAAACAAAATCTAATACCTTTCTCTTTTTTCTTTCTCTTCTTTCTTTCTCTTCCCAAACCCATGCAGCTACTTTTGAAGTCCGCAACAACTGCCCCTTCACTGTTTGGGCTGCCGCAGTACCCGGCGGCGGTCAACAACTTAATCAGAACGATGTTTGGACATTTGATGTGAATCCCGGCACGGTTGCCGCACGTGTTTGGGCTCGAACTAACTGCAACTTCGACGATTCAGGTCGTGGGGGATGTCAGACTGGCGACTGTGGTGGTATCCTTCAATGCCAAGCTTACGGCAGTCCACCGAACACCCTTGCCGAATACGCATTGAACCAATTCAATAACTTGGACTTCTTCGATATCTCTCTCGTTGATGGGTTTAACGTTCCGATGGAGTTCAGCCCGACTTCTGGCGACTGCACTTGTGGCATCAGGTATATATATGTTAATAAATTATCAAAAGCTTAAGTTGATGAGTTATGGTAAATTTAATGTTTTATTCATATTCTCTGGAAAGTTGCACTGCGGACATCAATGGGCAGTGCCCGAATGAGCTTAGTGCTCCTGGAGGGTGCAACAACTCGTGCACCGTGTTCGGTGGCGATCAATATTGCTGCACCGACCCAAACAGCAGCTGTGGGCCGACGGATTACTCTAAGTTCTTCAAGGATCGGTGCCCAGATGCATACAGTTACCCAAAAGACGATGCAACTAGCACATTCACTTGCCCCGGAGGAACCAACTACAGGGTCGTCTTCTGCCCTTAG

mRNA sequence

ATGACTATTACCATTTGGATCTCTTCAATTCTCCATAGAGAAACAAAATCTAATACCTTTCTCTTTTTTCTTTCTCTTCTTTCTTTCTCTTCCCAAACCCATGCAGCTACTTTTGAAGTCCGCAACAACTGCCCCTTCACTGTTTGGGCTGCCGCAGTACCCGGCGGCGGTCAACAACTTAATCAGAACGATGTTTGGACATTTGATGTGAATCCCGGCACGGTTGCCGCACGTGTTTGGGCTCGAACTAACTGCAACTTCGACGATTCAGGTCGTGGGGGATGTCAGACTGGCGACTGTGGTGGTATCCTTCAATGCCAAGCTTACGGCAGTCCACCGAACACCCTTGCCGAATACGCATTGAACCAATTCAATAACTTGGACTTCTTCGATATCTCTCTCGTTGATGGGTTTAACGTTCCGATGGACAGCTGTGGGCCGACGGATTACTCTAAGTTCTTCAAGGATCGGTGCCCAGATGCATACAGTTACCCAAAAGACGATGCAACTAGCACATTCACTTGCCCCGGAGGAACCAACTACAGGGTCGTCTTCTGCCCTTAG

Coding sequence (CDS)

ATGACTATTACCATTTGGATCTCTTCAATTCTCCATAGAGAAACAAAATCTAATACCTTTCTCTTTTTTCTTTCTCTTCTTTCTTTCTCTTCCCAAACCCATGCAGCTACTTTTGAAGTCCGCAACAACTGCCCCTTCACTGTTTGGGCTGCCGCAGTACCCGGCGGCGGTCAACAACTTAATCAGAACGATGTTTGGACATTTGATGTGAATCCCGGCACGGTTGCCGCACGTGTTTGGGCTCGAACTAACTGCAACTTCGACGATTCAGGTCGTGGGGGATGTCAGACTGGCGACTGTGGTGGTATCCTTCAATGCCAAGCTTACGGCAGTCCACCGAACACCCTTGCCGAATACGCATTGAACCAATTCAATAACTTGGACTTCTTCGATATCTCTCTCGTTGATGGGTTTAACGTTCCGATGGACAGCTGTGGGCCGACGGATTACTCTAAGTTCTTCAAGGATCGGTGCCCAGATGCATACAGTTACCCAAAAGACGATGCAACTAGCACATTCACTTGCCCCGGAGGAACCAACTACAGGGTCGTCTTCTGCCCTTAG

Protein sequence

MTITIWISSILHRETKSNTFLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARVWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFNVPMDSCGPTDYSKFFKDRCPDAYSYPKDDATSTFTCPGGTNYRVVFCP

Homology

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BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 7.9e-57
Identity = 115/216 (53.24%), Postives = 131/216 (60.65%), Query Frame = 1


Query: 21  LFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARVW 80
           L F++ L   ++   ATF + NNCPFTVWAAAVPGGG++L++   W  +   GT  ARVW
Sbjct: 12  LLFIAFLFTCAR--GATFNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVW 71

Query: 81  ARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFNV 140
            RT CNFD +GRG CQTGDC G+LQCQA+G PPNTLAEYALNQFNNLDFFDISLVDGFNV
Sbjct: 72  PRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNV 131

Query: 141 PMD--------------------SC--------GPTDYSKFFK----------------- 188
            M+                     C        G  +    FK                 
Sbjct: 132 AMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFS 191

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BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-55
Identity = 113/219 (51.60%), Postives = 133/219 (60.73%), Query Frame = 1


Query: 23  FLSLLSFSSQTHAATFEVRNNCPFTVWAAAVP-GGGQQLNQNDVWTFDVNPGTVAARVWA 82
           F  LL+F + T+AATFEVRNNCP+TVWAA+ P GGG++L++   W  +   GT  AR+W 
Sbjct: 1   FFFLLAFVTYTYAATFEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWG 60

Query: 83  RTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFNVP 142
           RTNCNFD  GRG CQTGDCGG+LQC  +G PPNTLAEYAL+QF+NLDF+DISLVDGFN+P
Sbjct: 61  RTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIP 120

Query: 143 MDSCGPTDYS-------------------------------KFFKD-------------- 188
           M +  PT+ S                                 F                
Sbjct: 121 M-TFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTD 180

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BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55
Identity = 113/202 (55.94%), Postives = 122/202 (60.40%), Query Frame = 1


Query: 36  ATFEVRNNCPFTVWAAAVP-GGGQQLNQNDVWTFDVNPGTVAARVWARTNCNFDDSGRGG 95
           A FE+ N C +TVWAA+VP GGG QLN    W+ DV  GT  ARVWART CNFD SGRGG
Sbjct: 1   ARFEITNRCTYTVWAASVPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGG 60

Query: 96  CQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFNVPMD----------- 155
           CQTGDCGG+L C+AYG+PPNTLAEY LN FNNLDFFDISLVDGFNVPMD           
Sbjct: 61  CQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRG 120

Query: 156 -SCGPTDYSK----------------FFKD---------------------RCPDAYSYP 188
            SC      +                 FK                      RCPDAYSYP
Sbjct: 121 ISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYP 180

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BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55
Identity = 114/224 (50.89%), Postives = 138/224 (61.61%), Query Frame = 1


Query: 18  NTFLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVP-GGGQQLNQNDVWTFDVNPGTVA 77
           ++F+FFL  L+F + T+AAT EVRNNCP+TVWAA+ P GGG++L++   W  +   GT  
Sbjct: 6   SSFVFFL--LAFVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKM 65

Query: 78  ARVWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVD 137
           AR+W RTNCNFD +GRG CQTGDCGG+LQC  +G PPNTLAEYAL+QF+NLDF+DISLVD
Sbjct: 66  ARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVD 125

Query: 138 GFNVPMDSCGPTDYS-------------------------------KFFKD--------- 188
           GFN+PM +  PT+ S                                 F           
Sbjct: 126 GFNIPM-TFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGP 185

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BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: ALL13_OLEEU (Thaumatin-like protein OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 107/223 (47.98%), Postives = 131/223 (58.74%), Query Frame = 1


Query: 15  TKSNTFLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGT 74
           +K+   L  L  ++F + THAATF++ N C +TVWAAA PGGG++L+Q   W  +V PGT
Sbjct: 4   SKNLPLLVSLWAITFFAYTHAATFDIVNQCTYTVWAAASPGGGRRLDQGQSWNINVAPGT 63

Query: 75  VAARVWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISL 134
             AR+W RTNCNFD +GRG C+TGDC G+L+CQ YG PPNTLAE+ALNQ NNLDF DIS 
Sbjct: 64  TQARIWGRTNCNFDANGRGQCETGDCNGLLECQGYGRPPNTLAEFALNQPNNLDFVDISN 123

Query: 135 VDGFNVPMDSCGPTDYSK---------------------------FFKD----------- 188
           VDGFN+P++    T+  +                            F             
Sbjct: 124 VDGFNIPLEFSPTTNVCRRLVCNAPIVQQCPSELRTPGGCNNPCTVFNTNEYCCTNGPGS 183

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BLAST of Lsi09G002950.1 vs. TrEMBL
Match: A0A0A0KKB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155460 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.5e-73
Identity = 143/218 (65.60%), Postives = 150/218 (68.81%), Query Frame = 1


Query: 20  FLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARV 79
           FL FLSL+ F S THAATFEV NNCPFT+WAAAVPGGGQQLNQNDVW FDVNPGT AARV
Sbjct: 8   FLLFLSLIPFYSHTHAATFEVHNNCPFTLWAAAVPGGGQQLNQNDVWIFDVNPGTAAARV 67

Query: 80  WARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFN 139
           WARTNCNFDDSG GGC+TGDCGG+LQCQ YGSPPNTLAEYALNQFNNLDFFDISLVDGFN
Sbjct: 68  WARTNCNFDDSGNGGCETGDCGGLLQCQGYGSPPNTLAEYALNQFNNLDFFDISLVDGFN 127

Query: 140 VPMD-----------SC----------------GPTDYSKFFKD---------------- 188
           VP++           SC                G  +    F                  
Sbjct: 128 VPLEFSPTSGDCRGISCNADINGQCPNELRASGGCNNPCTVFGGDQYCCTDPNSSCGPTD 187

[Close]

BLAST of Lsi09G002950.1 vs. TrEMBL
Match: A0A0A0KMN1_CUCSA (Thaumatin-like protein OS=Cucumis sativus GN=Csa_5G155450 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.3e-70
Identity = 135/220 (61.36%), Postives = 150/220 (68.18%), Query Frame = 1


Query: 19  TFLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAAR 78
           +++ FL  LSF   +HAATF++RNNCPF VWAAAVPGGG++LNQNDVWT +VNPGTVAAR
Sbjct: 4   SYICFLFFLSFFPHSHAATFQIRNNCPFAVWAAAVPGGGRRLNQNDVWTLNVNPGTVAAR 63

Query: 79  VWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGF 138
           +WARTNCNFD SGRG CQTGDCGG+LQCQAYG+PPNTLAEYALNQFNNLDFFDISL+DGF
Sbjct: 64  IWARTNCNFDGSGRGRCQTGDCGGLLQCQAYGTPPNTLAEYALNQFNNLDFFDISLIDGF 123

Query: 139 NVPMD----SCGPTDYSKFFKD-------------------------------------- 188
           NVPM+    S G     +   D                                      
Sbjct: 124 NVPMEFSPTSGGCARGIRCTADINGQCPNELRAPGGCNNPCTVFGGDRYCCTAPNSSCGP 183

[Close]

BLAST of Lsi09G002950.1 vs. TrEMBL
Match: M0TI38_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.0e-68
Identity = 120/169 (71.01%), Postives = 137/169 (81.07%), Query Frame = 1


Query: 21  LFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARVW 80
           L FL L      +HAATF++ N C FTVWAAAVPGGG+QL+ +  W+ +VNPGT   RVW
Sbjct: 14  LSFLLLPLLFVVSHAATFDIVNQCSFTVWAAAVPGGGRQLDPSQTWSINVNPGTTGGRVW 73

Query: 81  ARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFN- 140
           ART+C+FD SG G CQTGDCGG+L+CQ YG+PPNTLAE+ALNQF N+DF DISLVDGFN 
Sbjct: 74  ARTDCSFDGSGSGSCQTGDCGGLLECQGYGTPPNTLAEFALNQFQNMDFIDISLVDGFNY 133

Query: 141 -VPMDSCGPTDYSKFFKDRCPDAYSYPKDDATSTFTCPGGTNYRVVFCP 188
                SCGPT+YS FFK+ CPDAYSYPKDDATSTFTCPGGTNYRVVFCP
Sbjct: 134 CCTSGSCGPTNYSMFFKNNCPDAYSYPKDDATSTFTCPGGTNYRVVFCP 182

[Close]

BLAST of Lsi09G002950.1 vs. TrEMBL
Match: A0A059C162_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00557 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.3e-68
Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 1


Query: 22  FFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARVWA 81
           FF  L+S S+   AA F+V NNCP+TVWAAAVPGGG+QL+Q   W  DV  GT  AR+WA
Sbjct: 12  FFFLLISCSTLARAARFDVTNNCPYTVWAAAVPGGGRQLDQGQTWPLDVAAGTTEARIWA 71

Query: 82  RTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFNVP 141
           RTNC FD +G+G C+TGDCGG+LQCQAYG  PNTLAE++LNQ+ N DF D+SL++GFNVP
Sbjct: 72  RTNCRFDGAGQGSCETGDCGGLLQCQAYGVSPNTLAEFSLNQYMNQDFIDMSLIEGFNVP 131

Query: 142 MD-------------------SCGPTDYSKFFKDRCPDAYSYPKDDATSTFTCPGGTNYR 188
           M+                   SCGPTDYS++FKDRCPDAYSYPKDDATS FTCPGGTNY+
Sbjct: 132 MEFSSTSGECNRTDEYCCNSGSCGPTDYSRYFKDRCPDAYSYPKDDATSVFTCPGGTNYK 191

[Close]

BLAST of Lsi09G002950.1 vs. TrEMBL
Match: M0TBU2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.5e-65
Identity = 121/175 (69.14%), Postives = 132/175 (75.43%), Query Frame = 1


Query: 20  FLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARV 79
           F FF SLL   S  HAATFE+ N C +TVWAAAVPGGG+QLNQ   WT +VN GT   R+
Sbjct: 13  FFFFFSLLVTLS--HAATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRI 72

Query: 80  WARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFN 139
           W RT C+FD SGRG CQTGDCGG+L C AYGSPPNTLAE+ALNQFNNLDFFDISLVDGFN
Sbjct: 73  WGRTGCSFDGSGRGRCQTGDCGGVLSCTAYGSPPNTLAEFALNQFNNLDFFDISLVDGFN 132

Query: 140 VPMDSCGPTDYSKFFK-------DRCPDAYSYPKDDATSTFTCPGGTNYRVVFCP 188
           VPMD    +   +  +         CPDAYSYPKDD TSTFTCPGGTNYRVVFCP
Sbjct: 133 VPMDFSPTSGGCRGIRCAADINGQNCPDAYSYPKDDQTSTFTCPGGTNYRVVFCP 185

[Close]

BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT4G11650.1 (AT4G11650.1 osmotin 34)

HSP 1 Score: 207.6 bits (527), Expect = 6.6e-54
Identity = 112/220 (50.91%), Postives = 128/220 (58.18%), Query Frame = 1


Query: 18  NTFLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAA 77
           +TF+F  S L   S   AATFE+ N C +TVWAAA PGGG++L+    W  DV  GT  A
Sbjct: 7   STFIF--SALLLISTATAATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMA 66

Query: 78  RVWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDG 137
           R+W RTNCNFD SGRG CQTGDC G LQC  +G PPNTLAEYALNQFNNLDF+DISLVDG
Sbjct: 67  RIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDG 126

Query: 138 FNVPMD------SC---------------------GPTDYSKFFK--------------- 188
           FN+PM+      +C                     G  +    F+               
Sbjct: 127 FNIPMEFSPTSSNCHRILCTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSD 186

[Close]

BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT1G75040.1 (AT1G75040.1 pathogenesis-related gene 5)

HSP 1 Score: 129.4 bits (324), Expect = 2.3e-30
Identity = 84/240 (35.00%), Postives = 101/240 (42.08%), Query Frame = 1


Query: 17  SNTFLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTV- 76
           S+  + FL  ++      A  F +RNNCP TVWA  + G G +L       F++ PG   
Sbjct: 5   SSIHILFLVFITSGIAVMATDFTLRNNCPTTVWAGTLAGQGPKLGDGG---FELTPGASR 64

Query: 77  --------AARVWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNL 136
                   + R WART CNFD SG G C TGDCGG L+C   G PP TLAE+ L      
Sbjct: 65  QLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNGGGVPPVTLAEFTLVGDGGK 124

Query: 137 DFFDISLVDGFNV-----PMDSCGPTDYSKFFKD-------------------------- 188
           DF+D+SLVDG+NV     P    G   Y+    D                          
Sbjct: 125 DFYDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLKVMDQNNVVACKSACER 184

[Close]

BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT1G75050.1 (AT1G75050.1 Pathogenesis-related thaumatin superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 80/238 (33.61%), Postives = 100/238 (42.02%), Query Frame = 1


Query: 21  LFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTV----- 80
           LF + + S  + + A  F ++N+CP+TVW   + G    L       F + PG       
Sbjct: 10  LFLVFITSGIAVSAATVFTLQNSCPYTVWPGILSGNDNTLGDGG---FPLTPGASVQLTA 69

Query: 81  ----AARVWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFD 140
               + R WART CNFD SG G C TGDCGG+L+C   G PP TLAE+ L      DF+D
Sbjct: 70  PAGWSGRFWARTGCNFDASGHGNCGTGDCGGVLKCNGGGVPPVTLAEFTLVGDGGKDFYD 129

Query: 141 ISLVDGFNV-----PMDSCGPTDYSKFFKD------------------------------ 188
           +SLVDG+NV     P    G   Y+    D                              
Sbjct: 130 VSLVDGYNVEMGIKPQGGSGDCHYAGCVADVNAVCPNELRLMDPHTGIIAACKSACAAFN 189

[Close]

BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT1G75030.1 (AT1G75030.1 thaumatin-like protein 3)

HSP 1 Score: 120.9 bits (302), Expect = 8.2e-28
Identity = 79/239 (33.05%), Postives = 102/239 (42.68%), Query Frame = 1


Query: 21  LFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTV----- 80
           LFF+ + S  + + A  F ++N+C +TVW   + G    L       F + PG       
Sbjct: 10  LFFVFITSGIADS-ATVFTLQNSCAYTVWPGTLSGNSITLGDGG---FPLTPGASVQLTA 69

Query: 81  ----AARVWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFN-NLDFF 140
               + R WART CNFD SG G C TGDCGG+L+C   G PP TLAE+ +   N  +DF+
Sbjct: 70  PTGWSGRFWARTGCNFDASGHGTCVTGDCGGVLKCTGGGVPPATLAEFTVGSSNAGMDFY 129

Query: 141 DISLVDGFNV-----PMDSCGPTDYSKFFKD----------------------------- 188
           D+SLVDG+NV     P    G   Y+    D                             
Sbjct: 130 DVSLVDGYNVKMGIKPQGGFGNCKYAGCVSDINEICPSELRIMDPNSGSVAACKSACAAF 189

[Close]

BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT1G73620.1 (AT1G73620.1 Pathogenesis-related thaumatin superfamily protein)

HSP 1 Score: 111.7 bits (278), Expect = 4.9e-25
Identity = 81/242 (33.47%), Postives = 100/242 (41.32%), Query Frame = 1


Query: 17  SNTFLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVP--------GGGQQLNQNDVWTF 76
           S++ LF L LL   SQ  A+T    N C +TVW    P        GGG +L+ N  +T 
Sbjct: 23  SSSSLFLLPLLLLVSQASASTVIFYNKCTYTVWPGIQPSSGQSLLAGGGFKLSPNRAYTL 82

Query: 77  DVNPGTVAARVWARTNCNFDDSGRGGCQTGDCGGILQCQ-AYGSPPNTLAEYALNQFNNL 136
            + P   + R W R  C+FD SGRG C TGDCGG   C  A G PP TLAE  L   +++
Sbjct: 83  QLPP-LWSGRFWGRHGCSFDRSGRGRCATGDCGGSFLCNGAGGVPPATLAEITLG--HDM 142

Query: 137 DFFDISLVDGFN-----VPMDSCGPTDYSKFFKD-------------------------- 188
           DF+D+SLVDG+N     +P+   G   Y+    D                          
Sbjct: 143 DFYDVSLVDGYNLAMSIMPVKGTGKCTYAGCVSDLNRMCPVGLQVRSRDGTQVVACKSAC 202

[Close]

BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|659073737|ref|XP_008437224.1| (PREDICTED: protein P21-like [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 4.2e-74
Identity = 143/219 (65.30%), Postives = 153/219 (69.86%), Query Frame = 1


Query: 20  FLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARV 79
           FLFFLSLLSF S THAATF++RNNCPF VWAAAVPGGG++LNQNDVWT +VNPGTVAAR+
Sbjct: 9   FLFFLSLLSFFSHTHAATFQIRNNCPFAVWAAAVPGGGRRLNQNDVWTLNVNPGTVAARI 68

Query: 80  WARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFN 139
           WARTNCNFD SGRG CQTGDCGG+LQCQAYG+PPNTLAEYALNQFNNLDFFDIS VDGFN
Sbjct: 69  WARTNCNFDGSGRGRCQTGDCGGLLQCQAYGTPPNTLAEYALNQFNNLDFFDISFVDGFN 128

Query: 140 VPMD----SCGPTDYSKFFKD--------------------------------------- 188
           VPM+    S G T   +   D                                       
Sbjct: 129 VPMEFSPTSSGCTRGIRCTADINGQCPNELRAPGGCNNPCTVFGGDRYCCTAPNSSCGPT 188

[Close]

BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|659073739|ref|XP_008437225.1| (PREDICTED: protein P21-like [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 4.2e-74
Identity = 144/218 (66.06%), Postives = 151/218 (69.27%), Query Frame = 1


Query: 20  FLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARV 79
           FL FLSL+ F S THAATFEV N CPF+VWAAAVPGGGQQLNQND+W FDVNPGTVAARV
Sbjct: 8   FLLFLSLIPFYSHTHAATFEVHNKCPFSVWAAAVPGGGQQLNQNDIWIFDVNPGTVAARV 67

Query: 80  WARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFN 139
           WARTNCNFDDSG GGC+TGDCGG+LQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFN
Sbjct: 68  WARTNCNFDDSGHGGCETGDCGGLLQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFN 127

Query: 140 VPMD-----------SC----------------GPTDYSKFFKD---------------- 188
           VPM+           SC                G  +    F                  
Sbjct: 128 VPMEFSPTSGDCRGISCNADINGQCPNELRAPGGCNNPCTVFGGDQYCCTDPNSSCGPTD 187

[Close]

BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|778708255|ref|XP_004143988.2| (PREDICTED: protein P21-like [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 3.5e-73
Identity = 143/218 (65.60%), Postives = 150/218 (68.81%), Query Frame = 1


Query: 20  FLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARV 79
           FL FLSL+ F S THAATFEV NNCPFT+WAAAVPGGGQQLNQNDVW FDVNPGT AARV
Sbjct: 8   FLLFLSLIPFYSHTHAATFEVHNNCPFTLWAAAVPGGGQQLNQNDVWIFDVNPGTAAARV 67

Query: 80  WARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFN 139
           WARTNCNFDDSG GGC+TGDCGG+LQCQ YGSPPNTLAEYALNQFNNLDFFDISLVDGFN
Sbjct: 68  WARTNCNFDDSGNGGCETGDCGGLLQCQGYGSPPNTLAEYALNQFNNLDFFDISLVDGFN 127

Query: 140 VPMD-----------SC----------------GPTDYSKFFKD---------------- 188
           VP++           SC                G  +    F                  
Sbjct: 128 VPLEFSPTSGDCRGISCNADINGQCPNELRASGGCNNPCTVFGGDQYCCTDPNSSCGPTD 187

[Close]

BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|449452358|ref|XP_004143926.1| (PREDICTED: protein P21-like [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 6.2e-70
Identity = 135/220 (61.36%), Postives = 150/220 (68.18%), Query Frame = 1


Query: 19  TFLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAAR 78
           +++ FL  LSF   +HAATF++RNNCPF VWAAAVPGGG++LNQNDVWT +VNPGTVAAR
Sbjct: 4   SYICFLFFLSFFPHSHAATFQIRNNCPFAVWAAAVPGGGRRLNQNDVWTLNVNPGTVAAR 63

Query: 79  VWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGF 138
           +WARTNCNFD SGRG CQTGDCGG+LQCQAYG+PPNTLAEYALNQFNNLDFFDISL+DGF
Sbjct: 64  IWARTNCNFDGSGRGRCQTGDCGGLLQCQAYGTPPNTLAEYALNQFNNLDFFDISLIDGF 123

Query: 139 NVPMD----SCGPTDYSKFFKD-------------------------------------- 188
           NVPM+    S G     +   D                                      
Sbjct: 124 NVPMEFSPTSGGCARGIRCTADINGQCPNELRAPGGCNNPCTVFGGDRYCCTAPNSSCGP 183

[Close]

BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|629106971|gb|KCW72117.1| (hypothetical protein EUGRSUZ_E00557 [Eucalyptus grandis])

HSP 1 Score: 265.4 bits (677), Expect = 7.6e-68
Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 1


Query: 22  FFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARVWA 81
           FF  L+S S+   AA F+V NNCP+TVWAAAVPGGG+QL+Q   W  DV  GT  AR+WA
Sbjct: 12  FFFLLISCSTLARAARFDVTNNCPYTVWAAAVPGGGRQLDQGQTWPLDVAAGTTEARIWA 71

Query: 82  RTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFNVP 141
           RTNC FD +G+G C+TGDCGG+LQCQAYG  PNTLAE++LNQ+ N DF D+SL++GFNVP
Sbjct: 72  RTNCRFDGAGQGSCETGDCGGLLQCQAYGVSPNTLAEFSLNQYMNQDFIDMSLIEGFNVP 131

Query: 142 MD-------------------SCGPTDYSKFFKDRCPDAYSYPKDDATSTFTCPGGTNYR 188
           M+                   SCGPTDYS++FKDRCPDAYSYPKDDATS FTCPGGTNY+
Sbjct: 132 MEFSSTSGECNRTDEYCCNSGSCGPTDYSRYFKDRCPDAYSYPKDDATSVFTCPGGTNYK 191

The following BLAST results are available for this feature:

BLAST of Lsi09G002950.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TLP_ACTDE	7.9e-57	53.24	Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2	[more]
TPM1_SOLLC	2.5e-55	51.60	Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1	[more]
P21_SOYBN	4.3e-55	55.94	Protein P21 OS=Glycine max PE=1 SV=1	[more]
OS13_SOLCO	4.3e-55	50.89	Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1	[more]
ALL13_OLEEU	1.3e-54	47.98	Thaumatin-like protein OS=Olea europaea PE=1 SV=1	[more]

BLAST of Lsi09G002950.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKB7_CUCSA	2.5e-73	65.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155460 PE=4 SV=1	[more]
A0A0A0KMN1_CUCSA	4.3e-70	61.36	Thaumatin-like protein OS=Cucumis sativus GN=Csa_5G155450 PE=4 SV=1	[more]
M0TI38_MUSAM	4.0e-68	71.01	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A059C162_EUCGR	5.3e-68	64.32	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00557 PE=4 SV=1	[more]
M0TBU2_MUSAM	5.5e-65	69.14	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]

BLAST of Lsi09G002950.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G11650.1	6.6e-54	50.91	osmotin 34	[more]
AT1G75040.1	2.3e-30	35.00	pathogenesis-related gene 5	[more]
AT1G75050.1	1.9e-29	33.61	Pathogenesis-related thaumatin superfamily protein	[more]
AT1G75030.1	8.2e-28	33.05	thaumatin-like protein 3	[more]
AT1G73620.1	4.9e-25	33.47	Pathogenesis-related thaumatin superfamily protein	[more]

BLAST of Lsi09G002950.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073737\|ref\|XP_008437224.1\|	4.2e-74	65.30	PREDICTED: protein P21-like [Cucumis melo]	[more]
gi\|659073739\|ref\|XP_008437225.1\|	4.2e-74	66.06	PREDICTED: protein P21-like [Cucumis melo]	[more]
gi\|778708255\|ref\|XP_004143988.2\|	3.5e-73	65.60	PREDICTED: protein P21-like [Cucumis sativus]	[more]
gi\|449452358\|ref\|XP_004143926.1\|	6.2e-70	61.36	PREDICTED: protein P21-like [Cucumis sativus]	[more]
gi\|629106971\|gb\|KCW72117.1\|	7.6e-68	64.32	hypothetical protein EUGRSUZ_E00557 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR017949	Thaumatin_CS
IPR001938	Thaumatin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi09G002950	Lsi09G002950	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi09G002950.1.CDS.3	Lsi09G002950.1.CDS.3	CDS
Lsi09G002950.1.CDS.2	Lsi09G002950.1.CDS.2	CDS
Lsi09G002950.1.CDS.1	Lsi09G002950.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi09G002950.1	Lsi09G002950.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001938	Thaumatin	PRINTS	PR00347	THAUMATIN	coord: 56..65 score: 5.3E-41coord: 128..144 score: 5.3E-41coord: 177..186 score: 5.3E-41coord: 91..120 score: 5.3E-41coord: 78..89 score: 5.3E-41coord: 37..49 score: 5.3
IPR001938	Thaumatin	GENE3D	G3DSA:2.60.110.10		coord: 145..187 score: 9.0E-18coord: 36..143 score: 1.0
IPR001938	Thaumatin	PANTHER	PTHR31048	FAMILY NOT NAMED	coord: 1..187 score: 2.9E
IPR001938	Thaumatin	PFAM	PF00314	Thaumatin	coord: 42..143 score: 1.9E-32coord: 143..187 score: 1.5
IPR001938	Thaumatin	SMART	SM00205	tha2	coord: 38..187 score: 1.2
IPR001938	Thaumatin	PROFILE	PS51367	THAUMATIN_2	coord: 35..187 score: 35
IPR001938	Thaumatin	unknown	SSF49870	Osmotin, thaumatin-like protein	coord: 35..187 score: 6.93
IPR017949	Thaumatin, conserved site	PROSITE	PS00316	THAUMATIN_1	coord: 91..106 scor
None	No IPR available	PANTHER	PTHR31048:SF36	SUBFAMILY NOT NAMED	coord: 1..187 score: 2.9E