Lsi08G015710.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G015710.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Dedicator of cytokinesis 2
Location	chr08 : 23737151 .. 23739195 (-)
Sequence length	1147

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTGAGGAAGGACCTCTCTGTAGTACTTCTGTTAAATTTCCCTTCTAACTCTCTCTACATATTTATATTTCTCTCTCTTGATTCTCTGTAAATTTTCCCTTCATTTGAAGCTTTCAAAATCACCTAAGAGCTCAAAATTTTCTTAGTTTTAGTGGGTTAATCGATCTAAGATGCTCGGTTCTTTGACGAGTTTTAAGGCATTGAAATTGTTGTAAGAGATGAGATAATCGAAGAGGGGAATTTGAATCTGGGTTCTGTTTTGTTGGCCGATTGTATACTCGATTTTTTTTCTTAATTGGGAGTTGAATTTCCGGAGAGGCGTGAGGGGGAAGAGACTTCGAGTTTTGAAGGTTTGATAATTGAAATTAAATCAGTGTTTATGGTCTTCGCTGTTCTGGGTTTGATCTTATCTTTTGAAGTTATTTTCTAACTCTTGAATTTTTCGTTGTGCAGATTAATATCCGAGCGATTTAGTGGTTTGTTGAGGGTTTTCTGAGAGATTTGTTACCTTTTTCGAAAGTGGAACAAGAATTGGACTTTGAAAAATGCAATCGATTATCGGACTCTGGGATTTGGATTTACATTTCGCTTGTTTTCTGCGGTGAAAGAAGCAGATTTCTTTTCTTTGTGAGAGCTGAATCTTGAGGGGAAACCCCAGATCAGAAATTTCAGGTACTGATTGGTTATTTTCTTGGTGTATTTTACAGGCTCTGTTCTTTCTGTTCTAATTGTCTTCATCCGAAATTTCAGGTCTGATTTTCTTTCTATTCATTGCTACCTGCAGCATCGAATAGCAATCGCTTCCTCCTCTGTTCGAATTCTTAGGGTCTGTTAATATGCTTTCGAATTTTGGAAATTCGAGTTGCTGCTTTCATGGGAGGATCTTCTCTTTCTCTCTGTGAGGCATTGGGAAATCTGGATCCCCTGTTTCCATGGCAAATCCTTCTTCCTTCTTTGAGTTCCTCACATTTTCTAGATTTTCCCTCAACTTTTCTCTTAATTTCAGGCGGGAATTTCTTAACCCTGCGCCTTCCCAGTACTTCTCTTCAAAAACCCAAAGGGTTTTCGGCTTTTCAAATTTCGTGGATTCCGTTTTGGGATCATCGAGAAAACCCCATGTTTTGGTCTCAGACTGTTTGATGTTCTTCTCGAGTAAGGTTTTTGCAGTGTTCCTGGCGAAAACGTCATATCCCAGAGCTTGAAATTTCCAAACACCTTCGCTCTGTCCATTTTTCTTCGAAACTGCATAGATTTTCATCCGAATCCAATTGGTTGCAGAGTCTGCTTTTTATCCATTTTCTCTTTTGGTTTTCTCTTTGCCACTTTAATTCCTTTAGATTCTTTTGGGTAATCTTTCTTCAGACTAACCCCGGCTTGGAATGGGACAGGTGGTGTATAATTAAGCAAATGGAGAAAGACCATCTCAGAATCAATAGCCATGGGAGTTTCGTCAATAATAATCTCAACGGTAGGGACAGAACCGCCGTGGACAGTTCGCTGTTGTTACGAGCGAGATCCGAGGCCGCTGCCGTCGCCGTCGCAACCAGGCCGCAACCCACGCCGTCGGAGTTCGTGTTACAATGGGGAAATCGAAAGCGTCTCCGGTGTATGAAAGTCCAGGTCAAGGCTAAGGATGTTTCCGCCGCAGCACCGGCTCACAGAACCACCGTCCGAGTGGACCGGCGGGTCGTTAGAGCCGATAAAGACTCAATTATAACCCAGAACCACCAGGCGAGTTCCAATCATAACCTTAACCACAGTAATGGGTATTTGAATCTCCGTCAACGGCCGATTTCTCCTCAACCGCCAGTTCTACCGCCGCCGTCAGCTCCATCTCAGCGTATTCTAAGGTACTATCCGTTTCTCTCTCTTTTCTTCAACGCCAATCTTGTTTTCTTCTATCTGTTTGATTTATCGCTCGGATTTCAGCCGATCTTTGAGATTCTTTTTTCCCGGCCATGGGATTCAAAATCCCGATGTAATTTTTCTAATGGGCCTTTTTTATTTGGGCTTTTATTATGTTACAGGGCTTTCTACCCACTGA

mRNA sequence

CATTGAGGAAGGACCTCTCTGTAGTACTTCTGTTAAATTTCCCTTCTAACTCTCTCTACATATTTATATTTCTCTCTCTTGATTCTCTGTAAATTTTCCCTTCATTTGAAGCTTTCAAAATCACCTAAGAGCTCAAAATTTTCTTAGTTTTAGTGGGTTAATCGATCTAAGATGCTCGGTTCTTTGACGAGTTTTAAGGCATTGAAATTGTTGTAAGAGATGAGATAATCGAAGAGGGGAATTTGAATCTGGGTTCTGTTTTGTTGGCCGATTGTATACTCGATTTTTTTTCTTAATTGGGAGTTGAATTTCCGGAGAGGCGTGAGGGGGAAGAGACTTCGAGTTTTGAAGATTAATATCCGAGCGATTTAGTGGTTTGTTGAGGGTTTTCTGAGAGATTTGTTACCTTTTTCGAAAGTGGAACAAGAATTGGACTTTGAAAAATGCAATCGATTATCGGACTCTGGGATTTGGATTTACATTTCGCTTGTTTTCTGCGGTGAAAGAAGCAGATTTCTTTTCTTTGTGAGAGCTGAATCTTGAGGGGAAACCCCAGATCAGAAATTTCAGGTGGTGTATAATTAAGCAAATGGAGAAAGACCATCTCAGAATCAATAGCCATGGGAGTTTCGTCAATAATAATCTCAACGGTAGGGACAGAACCGCCGTGGACAGTTCGCTGTTGTTACGAGCGAGATCCGAGGCCGCTGCCGTCGCCGTCGCAACCAGGCCGCAACCCACGCCGTCGGAGTTCGTGTTACAATGGGGAAATCGAAAGCGTCTCCGGTGTATGAAAGTCCAGGTCAAGGCTAAGGATGTTTCCGCCGCAGCACCGGCTCACAGAACCACCGTCCGAGTGGACCGGCGGGTCGTTAGAGCCGATAAAGACTCAATTATAACCCAGAACCACCAGGCGAGTTCCAATCATAACCTTAACCACAGTAATGGGTATTTGAATCTCCGTCAACGGCCGATTTCTCCTCAACCGCCAGTTCTACCGCCGCCGTCAGCTCCATCTCAGCGTATTCTAAGCCGATCTTTGAGATTCTTTTTTCCCGGCCATGGGATTCAAAATCCCGATGTAATTTTTCTAATGGGCCTTTTTTATTTGGGCTTTTATTATGTTACAGGGCTTTCTACCCACTGA

Coding sequence (CDS)

ATGGAGAAAGACCATCTCAGAATCAATAGCCATGGGAGTTTCGTCAATAATAATCTCAACGGTAGGGACAGAACCGCCGTGGACAGTTCGCTGTTGTTACGAGCGAGATCCGAGGCCGCTGCCGTCGCCGTCGCAACCAGGCCGCAACCCACGCCGTCGGAGTTCGTGTTACAATGGGGAAATCGAAAGCGTCTCCGGTGTATGAAAGTCCAGGTCAAGGCTAAGGATGTTTCCGCCGCAGCACCGGCTCACAGAACCACCGTCCGAGTGGACCGGCGGGTCGTTAGAGCCGATAAAGACTCAATTATAACCCAGAACCACCAGGCGAGTTCCAATCATAACCTTAACCACAGTAATGGGTATTTGAATCTCCGTCAACGGCCGATTTCTCCTCAACCGCCAGTTCTACCGCCGCCGTCAGCTCCATCTCAGCGTATTCTAAGCCGATCTTTGAGATTCTTTTTTCCCGGCCATGGGATTCAAAATCCCGATGTAATTTTTCTAATGGGCCTTTTTTATTTGGGCTTTTATTATGTTACAGGGCTTTCTACCCACTGA

Protein sequence

MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNHSNGYLNLRQRPISPQPPVLPPPSAPSQRILSRSLRFFFPGHGIQNPDVIFLMGLFYLGFYYVTGLSTH

Homology

[Close]

BLAST of Lsi08G015710.1 vs. TrEMBL
Match: A0A0A0LNM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351830 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 6.4e-66
Identity = 135/150 (90.00%), Postives = 141/150 (94.00%), Query Frame = 1


Query: 1   MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWG 60
           MEK++LRINSHG+FV+NNLNGRDRT+VDSSLLLRARSEAA VAVATRPQPTPSEFVLQWG
Sbjct: 1   MEKENLRINSHGNFVSNNLNGRDRTSVDSSLLLRARSEAAVVAVATRPQPTPSEFVLQWG 60

Query: 61  NRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNHSNG 120
           NRKRLRCMKV VKAKDVSAAAPAHRTTVRVDRRVVRADKDSII  NHQ +SNHNLN SNG
Sbjct: 61  NRKRLRCMKVPVKAKDVSAAAPAHRTTVRVDRRVVRADKDSII-HNHQPTSNHNLNPSNG 120

Query: 121 YLNLRQRPISPQPPVLPPPSAPSQRILSRS 151
           YLNLRQRPISPQPPVLPPP APSQRIL  S
Sbjct: 121 YLNLRQRPISPQPPVLPPPPAPSQRILRNS 149

[Close]

BLAST of Lsi08G015710.1 vs. TrEMBL
Match: F6H388_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00710 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.2e-25
Identity = 81/153 (52.94%), Postives = 97/153 (63.40%), Query Frame = 1


Query: 1   MEKDHLRINSHGS--FVNNNLNGRDRTA-VDSSLLLRARSEAAAVAVATRPQPTPSEFVL 60
           MEK+ ++ N++ S    NNN N R+R+   D   LLRA SE         P+ T S+FVL
Sbjct: 1   MEKEGVKNNNNNSSSINNNNNNHRERSGGADDGSLLRASSE---------PRSTASDFVL 60

Query: 61  QWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNH 120
           QWGNRKRLRCMK+QVK      +AP H+TTVRVDRRVVRADKDS+      A++      
Sbjct: 61  QWGNRKRLRCMKIQVK----DDSAPVHKTTVRVDRRVVRADKDSLNQPTTTAAAT----- 120

Query: 121 SNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS 151
           SNGY NLR RP SPQPP  PPP  P QR+L  S
Sbjct: 121 SNGYFNLRHRPSSPQPP--PPP--PPQRVLRNS 131

[Close]

BLAST of Lsi08G015710.1 vs. TrEMBL
Match: A5BVL2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040194 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.2e-25
Identity = 81/153 (52.94%), Postives = 97/153 (63.40%), Query Frame = 1


Query: 1   MEKDHLRINSHGS--FVNNNLNGRDRTA-VDSSLLLRARSEAAAVAVATRPQPTPSEFVL 60
           MEK+ ++ N++ S    NNN N R+R+   D   LLRA SE         P+ T S+FVL
Sbjct: 197 MEKEGVKNNNNNSSSINNNNNNHRERSGGADDGSLLRASSE---------PRSTASDFVL 256

Query: 61  QWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNH 120
           QWGNRKRLRCMK+QVK      +AP H+TTVRVDRRVVRADKDS+      A++      
Sbjct: 257 QWGNRKRLRCMKIQVK----DDSAPVHKTTVRVDRRVVRADKDSLNQPTTTAAAT----- 316

Query: 121 SNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS 151
           SNGY NLR RP SPQPP  PPP  P QR+L  S
Sbjct: 317 SNGYFNLRHRPSSPQPP--PPP--PPQRVLRNS 327

[Close]

BLAST of Lsi08G015710.1 vs. TrEMBL
Match: A0A061GKC3_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037254 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.7e-24
Identity = 80/150 (53.33%), Postives = 92/150 (61.33%), Query Frame = 1


Query: 1   MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWG 60
           MEKD LR N++G   NN  + RDRT  D  LL R+ S+ A      +  P+ S+FVLQWG
Sbjct: 1   MEKDSLRTNNNG---NNTNHCRDRTGSDGGLL-RSSSDPA------KQTPSSSDFVLQWG 60

Query: 61  NRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNHSNG 120
           NRKRLRCMK+QVK      + P HRTTVRVDRRVVRADKDS       +S   N NH NG
Sbjct: 61  NRKRLRCMKIQVKD---DQSGPVHRTTVRVDRRVVRADKDS-------SSQPSNNNHGNG 120

Query: 121 YLNLRQRPISPQPPVLPPPSAPSQRILSRS 151
             NLRQRP SPQ P       P QR+L  S
Sbjct: 121 CFNLRQRPPSPQAP-------PPQRVLRNS 123

[Close]

BLAST of Lsi08G015710.1 vs. TrEMBL
Match: A0A061GL12_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037254 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.7e-24
Identity = 80/150 (53.33%), Postives = 92/150 (61.33%), Query Frame = 1


Query: 1   MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWG 60
           MEKD LR N++G   NN  + RDRT  D  LL R+ S+ A      +  P+ S+FVLQWG
Sbjct: 1   MEKDSLRTNNNG---NNTNHCRDRTGSDGGLL-RSSSDPA------KQTPSSSDFVLQWG 60

Query: 61  NRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNHSNG 120
           NRKRLRCMK+QVK      + P HRTTVRVDRRVVRADKDS       +S   N NH NG
Sbjct: 61  NRKRLRCMKIQVKD---DQSGPVHRTTVRVDRRVVRADKDS-------SSQPSNNNHGNG 120

Query: 121 YLNLRQRPISPQPPVLPPPSAPSQRILSRS 151
             NLRQRP SPQ P       P QR+L  S
Sbjct: 121 CFNLRQRPPSPQAP-------PPQRVLRNS 123

[Close]

BLAST of Lsi08G015710.1 vs. NCBI nr
Match: gi|449450334|ref|XP_004142918.1| (PREDICTED: uncharacterized protein LOC101215839 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 9.2e-66
Identity = 135/150 (90.00%), Postives = 141/150 (94.00%), Query Frame = 1


Query: 1   MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWG 60
           MEK++LRINSHG+FV+NNLNGRDRT+VDSSLLLRARSEAA VAVATRPQPTPSEFVLQWG
Sbjct: 1   MEKENLRINSHGNFVSNNLNGRDRTSVDSSLLLRARSEAAVVAVATRPQPTPSEFVLQWG 60

Query: 61  NRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNHSNG 120
           NRKRLRCMKV VKAKDVSAAAPAHRTTVRVDRRVVRADKDSII  NHQ +SNHNLN SNG
Sbjct: 61  NRKRLRCMKVPVKAKDVSAAAPAHRTTVRVDRRVVRADKDSII-HNHQPTSNHNLNPSNG 120

Query: 121 YLNLRQRPISPQPPVLPPPSAPSQRILSRS 151
           YLNLRQRPISPQPPVLPPP APSQRIL  S
Sbjct: 121 YLNLRQRPISPQPPVLPPPPAPSQRILRNS 149

[Close]

BLAST of Lsi08G015710.1 vs. NCBI nr
Match: gi|659087507|ref|XP_008444489.1| (PREDICTED: uncharacterized protein LOC103487794 [Cucumis melo])

HSP 1 Score: 253.1 bits (645), Expect = 3.9e-64
Identity = 132/150 (88.00%), Postives = 138/150 (92.00%), Query Frame = 1


Query: 1   MEKDHLRINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWG 60
           MEK+HLRINSHG+F+++NLNGRDRTA+DSSLLLRARSEAA VAVATRPQP PSEFVLQWG
Sbjct: 1   MEKEHLRINSHGNFISSNLNGRDRTALDSSLLLRARSEAAVVAVATRPQPAPSEFVLQWG 60

Query: 61  NRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNHSNG 120
           NRKRLRCMKVQVKAKDVSA APAHRTTVRVDRRVVRADKDSII  NHQ SSN NLN SNG
Sbjct: 61  NRKRLRCMKVQVKAKDVSATAPAHRTTVRVDRRVVRADKDSII-HNHQPSSNPNLNPSNG 120

Query: 121 YLNLRQRPISPQPPVLPPPSAPSQRILSRS 151
           YLNLRQRPISPQPPVLPPP APS RIL  S
Sbjct: 121 YLNLRQRPISPQPPVLPPPPAPSHRILRNS 149

[Close]

BLAST of Lsi08G015710.1 vs. NCBI nr
Match: gi|1009134481|ref|XP_015884470.1| (PREDICTED: probable serine/threonine-protein kinase DDB_G0282963 [Ziziphus jujuba])

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26
Identity = 82/145 (56.55%), Postives = 95/145 (65.52%), Query Frame = 1


Query: 7   RINSHGSFVNNNLNGRDRTAVDSSLLLRARSEAAAVAVATRPQPTPSEFVLQWGNRKRLR 66
           R N H +  N+N + RDR   D SLLLRA S  A        Q TPS+FVLQWGNRKRLR
Sbjct: 9   RHNHHNN--NSNSSNRDRNGADGSLLLRAASSDAI------GQSTPSDFVLQWGNRKRLR 68

Query: 67  CMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNH-NLNHSNGYLNLR 126
           CMK+QVK     ++AP HRTTVRVDRRVVRADKD+    NH  ++ H N N++NGYLNLR
Sbjct: 69  CMKIQVKD---DSSAPVHRTTVRVDRRVVRADKDA----NHPTTTIHNNNNNTNGYLNLR 128

Query: 127 QRPISPQPPVLPPPSAPSQRILSRS 151
           QRP SPQ P       PS R+L  S
Sbjct: 129 QRPPSPQQP-------PSHRVLRNS 131

[Close]

BLAST of Lsi08G015710.1 vs. NCBI nr
Match: gi|147799466|emb|CAN70604.1| (hypothetical protein VITISV_040194 [Vitis vinifera])

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-24
Identity = 81/153 (52.94%), Postives = 97/153 (63.40%), Query Frame = 1


Query: 1   MEKDHLRINSHGS--FVNNNLNGRDRTA-VDSSLLLRARSEAAAVAVATRPQPTPSEFVL 60
           MEK+ ++ N++ S    NNN N R+R+   D   LLRA SE         P+ T S+FVL
Sbjct: 197 MEKEGVKNNNNNSSSINNNNNNHRERSGGADDGSLLRASSE---------PRSTASDFVL 256

Query: 61  QWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNH 120
           QWGNRKRLRCMK+QVK      +AP H+TTVRVDRRVVRADKDS+      A++      
Sbjct: 257 QWGNRKRLRCMKIQVK----DDSAPVHKTTVRVDRRVVRADKDSLNQPTTTAAAT----- 316

Query: 121 SNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS 151
           SNGY NLR RP SPQPP  PPP  P QR+L  S
Sbjct: 317 SNGYFNLRHRPSSPQPP--PPP--PPQRVLRNS 327

[Close]

BLAST of Lsi08G015710.1 vs. NCBI nr
Match: gi|731384899|ref|XP_010648316.1| (PREDICTED: putative uncharacterized protein DDB_G0285119 [Vitis vinifera])

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-24
Identity = 81/153 (52.94%), Postives = 97/153 (63.40%), Query Frame = 1


Query: 1   MEKDHLRINSHGS--FVNNNLNGRDRTA-VDSSLLLRARSEAAAVAVATRPQPTPSEFVL 60
           MEK+ ++ N++ S    NNN N R+R+   D   LLRA SE         P+ T S+FVL
Sbjct: 1   MEKEGVKNNNNNSSSINNNNNNHRERSGGADDGSLLRASSE---------PRSTASDFVL 60

Query: 61  QWGNRKRLRCMKVQVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIITQNHQASSNHNLNH 120
           QWGNRKRLRCMK+QVK      +AP H+TTVRVDRRVVRADKDS+      A++      
Sbjct: 61  QWGNRKRLRCMKIQVK----DDSAPVHKTTVRVDRRVVRADKDSLNQPTTTAAAT----- 120

Query: 121 SNGYLNLRQRPISPQPPVLPPPSAPSQRILSRS 151
           SNGY NLR RP SPQPP  PPP  P QR+L  S
Sbjct: 121 SNGYFNLRHRPSSPQPP--PPP--PPQRVLRNS 131

The following BLAST results are available for this feature:

BLAST of Lsi08G015710.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi08G015710.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNM6_CUCSA	6.4e-66	90.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351830 PE=4 SV=1	[more]
F6H388_VITVI	7.2e-25	52.94	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00710 PE=4 SV=...	[more]
A5BVL2_VITVI	7.2e-25	52.94	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040194 PE=4 SV=1	[more]
A0A061GKC3_THECC	2.7e-24	53.33	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037254 PE=4 SV=1	[more]
A0A061GL12_THECC	2.7e-24	53.33	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_037254 PE=4 SV=1	[more]

BLAST of Lsi08G015710.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi08G015710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450334\|ref\|XP_004142918.1\|	9.2e-66	90.00	PREDICTED: uncharacterized protein LOC101215839 [Cucumis sativus]	[more]
gi\|659087507\|ref\|XP_008444489.1\|	3.9e-64	88.00	PREDICTED: uncharacterized protein LOC103487794 [Cucumis melo]	[more]
gi\|1009134481\|ref\|XP_015884470.1\|	1.9e-26	56.55	PREDICTED: probable serine/threonine-protein kinase DDB_G0282963 [Ziziphus jujub...	[more]
gi\|147799466\|emb\|CAN70604.1\|	1.0e-24	52.94	hypothetical protein VITISV_040194 [Vitis vinifera]	[more]
gi\|731384899\|ref\|XP_010648316.1\|	1.0e-24	52.94	PREDICTED: putative uncharacterized protein DDB_G0285119 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi08G015710	Lsi08G015710	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi08G015710.1.CDS.2	Lsi08G015710.1.CDS.2	CDS
Lsi08G015710.1.CDS.1	Lsi08G015710.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi08G015710.1.five_prime_UTR.3	Lsi08G015710.1.five_prime_UTR.3	five_prime_UTR
Lsi08G015710.1.five_prime_UTR.2	Lsi08G015710.1.five_prime_UTR.2	five_prime_UTR
Lsi08G015710.1.five_prime_UTR.1	Lsi08G015710.1.five_prime_UTR.1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi08G015710.1	Lsi08G015710.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33130	FAMILY NOT NAMED	coord: 49..134 score: 5.9
None	No IPR available	PANTHER	PTHR33130:SF12	SUBFAMILY NOT NAMED	coord: 49..134 score: 5.9