Lsi08G010710.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi08G010710.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr08 : 19277282 .. 19280224 (-)
Sequence length555
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTTGTAATTTGCATGAACTTCTTTCTTTAGAGATCGAAGCTGGTAACAAAACAATTTCATAATTTCACTTGATCAAATAATCATAAAATTTTAATTTTAATAAGTTAAGTCAAATTTAATTTGAGTGTTGTCAGATTGGCTAATTCTGATTGTTCTGCCATGGCATCAATTATGTATTTCTTGGAAGAGGACACGTTTCTGAATTTCTCTTCAATATCTACAGAACTGAATGGCCTGGATTTCTCAGTAGGTATACGAAGAGAACGGCTTCTGATCTTCAATCTCGACCTTTAATCGGCGCTGCTAGAACGCGATTTTCATGCTGTCATAGCATTTCTGTAGCTCAATCTGCTGCGCCAAGTAATTCCCCTTTCTACCACACTGTCTATTAACTTAGAACTTGATTTGTTACTTTAGATTTGAAGTATTGCTGGATGAGGATGACGTAGTATTTGAATTAATTTACAATGCTTAATGTTTCTAATGATTTCAGTTCTTACTTTAACTAAAATGTATAATCGGAGTTCGACAATGTTGGGCTTTTCTGTATGGAAATCGAAACTTATTAGCGGCATTTCATGTCAAAAGAAACTCTAGGATGCTTGATCAATATGTTTGAAACTCAGAATAGGACTGACTGTTCTCTTGGTGGTTAAGGATAACTAAAAGCAAGAAAGAAAATTAAGAGCCAGAAATTTAAAGGATTATAGGAACAGCTGCTAACATGATGCCCAATTTTCTTTTGGAAGTTCCATAGCATTTCAATTACTTTGTCTTTATGGGTCTGGTGCCATCCATCTTCTAGGGAAGTAAAGATTTTGTTCATCACCTAAATACCTGTGGCGTTTCTTTAAACATAATTTGTATAATTGATCAACCAAAATGAAAAAGAATTATCTTAAGGACATTGTTTAAATAATCAAGTCAAGCGTGAACATTGTATATTAGAGATTGATCGATATCTTTTATAGATACCTATAAAACATTCAAAAAAATGAATACACTTAGTTCAGAAATTAAAAAAAATTATTAATTTAAATAAAATTTATAATTTTTTATTTATAGAAATATTCATCGATATCAATATTTTGTCGACATATCCATTGATAAATCTATAACATTGAAATCTCGATATCAATATCGACATTGATATTTTAATCCTTGCTTGATTGATACATATTTAATGTATGTATATGTTGTGAGTTTCTGCCTCTACTTGTTACATAATCAATTTGCACTTTCATGTAATGGCTATCCTAAGAAGCATGAACACTTTAGTTTAGCTAGTGTGCCCATGTCCAACATATGTCAGACACTTGGACACTCTAACATTTGTTGGACATGTATCGGACACTTGTTAGTTGTACAAAGACAAAGTAGGCCCAACATTTGTAGACATGCGTCGAACACTTGTTAAGTATACTAAATAGGCACTTATATTAAAAAAAATAATAATAAATTTTGAAAGCGAAGTACATCGACCTAACTTTTAAGCATGTAAAAGGATAAAAAATATATAAATTTCAAAAATGGCTATTATAATAAATGTGCCCTTGTTGTTGTGTCTATGTCCTAAATTTTTAAAAAATGACATGTCACCTTGTCTGTGTTGTATCTGTATCCGTGCTTCTTAGTTCTTAGGGCTATCCATTTGTGTATACAACACTGTAATAATGATGCTGATAATAGTTGACATGATTACCACCCCTCTGATAATATATCCATTTGTATCATGCAACTTGTGATTTTCAACAAGTGATGAGATTTTTGTTAACCATTTCCACAATTTTGGCTCCTTACAAATAAATTATGTTTGATTCAACTTAGGTGGATGATACTTCGTTTGAAGGTGCTCCAAAAATAGCAAAATTGTTGTGGATGCTACCCATTAATTTCCATGATATCATTGGATTCTTGTGGGATGAACAGAATAACTGCTTCTAGAATAATAAAGAACAATCCACATGATACTAAAACTAAAGTTTACTTTTGGATGTTCTAACACCACCCACAAGTTTCGGACTCTACCAGTGAGCACATCATTGATGAGAAAGAAAACTTACCTTAGAGAGACCCCACAAATTATTTTATAATGCCTCTGTCTCTTCTTCATTGATATAGGAAATTTTACGTTTTCTGTTCTTAGCATGGGGTTTTATATCCCTTATCTATTGATTTGGCTATTATAGTTTTTCAGATCATAGTTTTCTTTGGTTCAATATTTACACTTTACAAAATTTTCTTTCGCACAGAATAGGATGTAAGTTGTTGCTGAAAATAATTTTTAATCAACATGCTTAGAGTGGATTTTGCTATGTGAGCCCATATTACATGACATGAGGGGCATAGCTGCAGAAGCTTTATGGTTAAAATTATGGGCCTATGAGATATGTTGCTTCCTTTCATCATGTTGTAGCTACAGTACAAATGTGAAAAATGTATGTGATTGGCAGGGGACATTTATGCGGTGGGTTTATGTATACTCATTTTCTGTTTTTTTTTAGGGGGTGGGGGATAGAAAATTTTCTGTTTTTTTTTTTAGTGGGTGGGGGATAGGAAACTGAAAAAGTTGGCACCTTTTTTTTTGCTTAAATGCTATTGAGGCTCCAGATAATATCTTCTCCCCTATTTTTCTTTTTATTCTAGTCCTGTCACAACATGTATTTATTTATAAACAAACACTGCACTACGTGTCGAGTTTATCATATCCTTGCTGGGATTCTTATCAATTTTCGTAGACTGATAATGAAGAATATCAATCCCATCGCTGAAGAAAGGAGGGGAACACATTAATTCATATTCTCAATCTCATTCAGTGCACCCACAGCTTTTGCAAAGGAGGGAATGTGACCACATATTTACAAAAATCACTGCCAAGATGTCAACGACGCAGCAAATATCGACAGAGAGAGGCATAGAGGGGACCATGATCTGCTAG

mRNA sequence

ATGAGCTTATTGGCTAATTCTGATTGTTCTGCCATGGCATCAATTATGTATTTCTTGGAAGAGGACACAACTGAATGGCCTGGATTTCTCAGTAGGTATACGAAGAGAACGGCTTCTGATCTTCAATCTCGACCTTTAATCGGCGCTGCTAGAACGCGATTTTCATGCTGTCATAGCATTTCTGTAGCTCAATCTGCTGCGCCAAAGTGGATTTTGCTATGTGAGCCCATATTACATGACATGAGGGGCATAGCTGCAGAAGCTTTATGGTTAAAATTATGGGCCTATGAGATATGTTGCTTCCTTTCATCATGTTGTAGCTACAGTACAAATGTGAAAAATTGGGTGGGGGATAGGAAACTGAAAAAAATATCAATCCCATCGCTGAAGAAAGGAGGGGAACACATTAATTCATATTCTCAATCTCATTCAGTGCACCCACAGCTTTTGCAAAGGAGGGAATGTGACCACATATTTACAAAAATCACTGCCAAGATGTCAACGACGCAGCAAATATCGACAGAGAGAGGCATAGAGGGGACCATGATCTGCTAG

Coding sequence (CDS)

ATGAGCTTATTGGCTAATTCTGATTGTTCTGCCATGGCATCAATTATGTATTTCTTGGAAGAGGACACAACTGAATGGCCTGGATTTCTCAGTAGGTATACGAAGAGAACGGCTTCTGATCTTCAATCTCGACCTTTAATCGGCGCTGCTAGAACGCGATTTTCATGCTGTCATAGCATTTCTGTAGCTCAATCTGCTGCGCCAAAGTGGATTTTGCTATGTGAGCCCATATTACATGACATGAGGGGCATAGCTGCAGAAGCTTTATGGTTAAAATTATGGGCCTATGAGATATGTTGCTTCCTTTCATCATGTTGTAGCTACAGTACAAATGTGAAAAATTGGGTGGGGGATAGGAAACTGAAAAAAATATCAATCCCATCGCTGAAGAAAGGAGGGGAACACATTAATTCATATTCTCAATCTCATTCAGTGCACCCACAGCTTTTGCAAAGGAGGGAATGTGACCACATATTTACAAAAATCACTGCCAAGATGTCAACGACGCAGCAAATATCGACAGAGAGAGGCATAGAGGGGACCATGATCTGCTAG

Protein sequence

MSLLANSDCSAMASIMYFLEEDTTEWPGFLSRYTKRTASDLQSRPLIGAARTRFSCCHSISVAQSAAPKWILLCEPILHDMRGIAAEALWLKLWAYEICCFLSSCCSYSTNVKNWVGDRKLKKISIPSLKKGGEHINSYSQSHSVHPQLLQRRECDHIFTKITAKMSTTQQISTERGIEGTMIC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi08G010710Lsi08G010710gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi08G010710.1Lsi08G010710.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi08G010710.1.CDS.6Lsi08G010710.1.CDS.6CDS
Lsi08G010710.1.CDS.5Lsi08G010710.1.CDS.5CDS
Lsi08G010710.1.CDS.4Lsi08G010710.1.CDS.4CDS
Lsi08G010710.1.CDS.3Lsi08G010710.1.CDS.3CDS
Lsi08G010710.1.CDS.2Lsi08G010710.1.CDS.2CDS
Lsi08G010710.1.CDS.1Lsi08G010710.1.CDS.1CDS