Lsi07G014300.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGGCGGGCAACCATGGCGACCAAAATAACCATTATTATGTGTTTAACTTCTTGTCATTTGGTGTAAGTTCCAGCACAGCAACCAAATCATACGCAAAAAACATCGACCCAAAAATCTTAAAACTCAACAAACAACAAAAACTTACTCATTTCCATCTTTATTGGCACGACACCGTCACTGGCTCCAAACCTTCCAACGTCGAAGTCCTACCGCCGCGCAATAACGTCACCGTGTTCGGTGAAGTTAACATGTTTGACAACCCTTTGACCATGGGCCCCGAATTGGGCTAGCAATTGGTGGGCCTGTTGGTGAAAATAATGGAAAACGGAGTTTTGAAACAAAAAAAGAAAAAATGAATTTTGAAAAGGTGAGAATCATTTAGTTAAGCATTGCGACTTCACCTTATTTACCCTCTCCTTTAGCTTTGGCTTTGGACTCCAAGAGGTACTCATGTTTTAGAAGGGGTGAAGAGATAGACAATGATGGGCTTGGTGGCTTCTCCACACTCGCGCGCCACCGTCCGTCCGGTGAGGTGGGGTTGCAATAAAGATAATTTTTATTATTTTATTTTTTTAAAAATAAAATCGTTTTGCACCCCCTTGCCACATTCACCGCGTGGTCAACCAGTCTTCGCGCCTGCCCCCTTTTCTCGGCGCACGTGAAGTGGACGAGCGCTCAGCTCACAGCGCACGTTCTGTGGTCGAGCGCTCGTCTAGCATGCATTGGTTGGACCACGTGGTGTATATAAAGCCCGCCATCTCCATTTGACAAAAACAAAATGAAAACTTATTTTCACAAAATTCTTGTAGTCCGAGTATTATTGAAGGGTGTGAGCATTCCGTTCGATTCTTGTGCAAGATTCAATCGAGATAGACTTTTCTGGGCTGTTTTATTATGGGGACGACGTGACAATGATTTCAAACTGCATGCACCTTGGGCAGAGCCGCGAAACATCTTAAAGAGAGAGCTCCTCGACTCAACCTTCACGAGTTTTTGTTTTGCAGGTGTCGACCTCTAGGCGTTCAGTACGAGGGTTCATCGCATAGCTTGGTGTTCAACTCGAGGCATTCATTTTCTTGCGTTGACCAGCAGGCGTCCAGCTGCTTGCGTTGACCACCAGGCGTCCAGATCCTTGCGTTGACTGTCAGGGCATTCAAGATTCTCATCATATAGTACCAGTTCCAATCGGGCCGGTCACAAGGATTCTATGCAGCTTCAGCTCAATACCAAATTGGGCTTTTGATGGCTATGAACTTTGTGTTCCCTGATGGAAAATATAAAGGCAGCTCCTTCATTGTGCTCGGTCAGAATGCCATCTCCGACGCTGTGAGGGAGATGTCGGTCGTCGGAGGAAGCGGCCGGTTTCGATTTTCTACAGGCTATGCTTTAGCGAAAACTCACTATCGTAATCCCACCACGTTTGATGCCATTGTTGAGTACAATGTTTATGTGTTGCAT GAGGCGGGCAACCATGGCGACCAAAATAACCATTATTATGTGTTTAACTTCTTGTCATTTGGTGTAAGTTCCAGCACAGCAACCAAATCATACGCAAAAAACATCGACCCAAAAATCTTAAAACTCAACAAACAACAAAAACTTACTCATTTCCATCTTTATTGGCACGACACCGTCACTGGCTCCAAACCTTCCAACGTCGAAGTCCTACCGCCGCGCAATAACGTCACCGTGTTCGCTCAATACCAAATTGGGCTTTTGATGGCTATGAACTTTGTGTTCCCTGATGGAAAATATAAAGGCAGCTCCTTCATTGTGCTCGGTCAGAATGCCATCTCCGACGCTGTGAGGGAGATGTCGGTCGTCGGAGGAAGCGGCCGGTTTCGATTTTCTACAGGCTATGCTTTAGCGAAAACTCACTATCGTAATCCCACCACGTTTGATGCCATTGTTGAGTACAATGTTTATGTGTTGCAT GAGGCGGGCAACCATGGCGACCAAAATAACCATTATTATGTGTTTAACTTCTTGTCATTTGGTGTAAGTTCCAGCACAGCAACCAAATCATACGCAAAAAACATCGACCCAAAAATCTTAAAACTCAACAAACAACAAAAACTTACTCATTTCCATCTTTATTGGCACGACACCGTCACTGGCTCCAAACCTTCCAACGTCGAAGTCCTACCGCCGCGCAATAACGTCACCGTGTTCGCTCAATACCAAATTGGGCTTTTGATGGCTATGAACTTTGTGTTCCCTGATGGAAAATATAAAGGCAGCTCCTTCATTGTGCTCGGTCAGAATGCCATCTCCGACGCTGTGAGGGAGATGTCGGTCGTCGGAGGAAGCGGCCGGTTTCGATTTTCTACAGGCTATGCTTTAGCGAAAACTCACTATCGTAATCCCACCACGTTTGATGCCATTGTTGAGTACAATGTTTATGTGTTGCAT EAGNHGDQNNHYYVFNFLSFGVSSSTATKSYAKNIDPKILKLNKQQKLTHFHLYWHDTVTGSKPSNVEVLPPRNNVTVFAQYQIGLLMAMNFVFPDGKYKGSSFIVLGQNAISDAVREMSVVGGSGRFRFSTGYALAKTHYRNPTTFDAIVEYNVYVLH
BLAST of Lsi07G014300.1 vs. Swiss-Prot
Match: DIR19_ARATH (Dirigent protein 19 OS=Arabidopsis thaliana GN=DIR19 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 3.2e-27 Identity = 75/182 (41.21%), Postives = 101/182 (55.49%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. Swiss-Prot
Match: DIR7_ARATH (Dirigent protein 7 OS=Arabidopsis thaliana GN=DIR7 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26 Identity = 69/169 (40.83%), Postives = 91/169 (53.85%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. Swiss-Prot
Match: DIR20_ARATH (Dirigent protein 20 OS=Arabidopsis thaliana GN=DIR20 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 6.1e-26 Identity = 68/169 (40.24%), Postives = 90/169 (53.25%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. Swiss-Prot
Match: DIR22_ARATH (Dirigent protein 22 OS=Arabidopsis thaliana GN=DIR22 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.2e-19 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. Swiss-Prot
Match: DIR3_ARATH (Dirigent protein 3 OS=Arabidopsis thaliana GN=DIR3 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TrEMBL
Match: A0A0A0LUT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015830 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 7.2e-50 Identity = 110/175 (62.86%), Postives = 122/175 (69.71%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TrEMBL
Match: A0A0A0KX42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280650 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.8e-37 Identity = 89/171 (52.05%), Postives = 112/171 (65.50%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TrEMBL
Match: A0A0B2PXX4_GLYSO (Disease resistance response protein 206 OS=Glycine soja GN=glysoja_031285 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.6e-31 Identity = 76/177 (42.94%), Postives = 106/177 (59.89%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TrEMBL
Match: K7L1Z4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G157100 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.6e-31 Identity = 76/177 (42.94%), Postives = 106/177 (59.89%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TrEMBL
Match: A0A067LIA9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19197 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.8e-30 Identity = 83/183 (45.36%), Postives = 107/183 (58.47%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TAIR10
Match: AT1G58170.1 (AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 122.9 bits (307), Expect = 1.8e-28 Identity = 75/182 (41.21%), Postives = 101/182 (55.49%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TAIR10
Match: AT3G13650.1 (AT3G13650.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 120.9 bits (302), Expect = 6.9e-28 Identity = 69/169 (40.83%), Postives = 91/169 (53.85%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TAIR10
Match: AT1G55210.1 (AT1G55210.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 118.6 bits (296), Expect = 3.4e-27 Identity = 68/169 (40.24%), Postives = 90/169 (53.25%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TAIR10
Match: AT3G13660.1 (AT3G13660.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. TAIR10
Match: AT5G49040.1 (AT5G49040.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. NCBI nr
Match: gi|659106501|ref|XP_008453355.1| (PREDICTED: dirigent protein 22-like [Cucumis melo]) HSP 1 Score: 216.9 bits (551), Expect = 2.6e-53 Identity = 115/175 (65.71%), Postives = 126/175 (72.00%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. NCBI nr
Match: gi|449441137|ref|XP_004138340.1| (PREDICTED: dirigent protein 22 [Cucumis sativus]) HSP 1 Score: 204.9 bits (520), Expect = 1.0e-49 Identity = 110/175 (62.86%), Postives = 122/175 (69.71%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. NCBI nr
Match: gi|778693014|ref|XP_011653564.1| (PREDICTED: dirigent protein 22-like [Cucumis sativus]) HSP 1 Score: 163.7 bits (413), Expect = 2.6e-37 Identity = 89/171 (52.05%), Postives = 112/171 (65.50%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. NCBI nr
Match: gi|659097739|ref|XP_008449786.1| (PREDICTED: dirigent protein 22-like [Cucumis melo]) HSP 1 Score: 161.8 bits (408), Expect = 1.0e-36 Identity = 87/167 (52.10%), Postives = 109/167 (65.27%), Query Frame = 1
BLAST of Lsi07G014300.1 vs. NCBI nr
Match: gi|356521072|ref|XP_003529182.1| (PREDICTED: dirigent protein 22-like [Glycine max]) HSP 1 Score: 143.3 bits (360), Expect = 3.7e-31 Identity = 76/177 (42.94%), Postives = 106/177 (59.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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