Lsi07G011470.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGCAAAGCCCTAAACCAAAGCCATCGGAAATCCAGAACTTTCCGCCGCCGAAGTCCACCACCGGCCGGAGCATGTCGACGCCAAGGTCGGCGAGCGGCGGCGGGGGTAGCCGGAGGGAGACGCCGGATTTCCACAGCACAGCGGCGAAACTGGAGAGGGCGAAGGAGGTGTATAGAGCGTACGAAGGGCATGGAGAAAGGCCGACCATTGTGGAGATTGTGGGATGGTGTTTCTATGAACTTTGCTCGTTGTTTGTATTGACGTTGTTGATTCCGGTTGTTTTTCCGTTGATTATCAGCCAGATTAGTGGAACTCTGACGGAACCGCCTCAGGGATGGTTTAAGAGCTTTATGGGCTTCGATTGCCCTCCTAGAGAAATGCAACTGTAAGTCTCGTCTGTTTTCTTTCTCGTTTCAGTTGACAGTTGGTCGTGCCACGTGGATGAGCCTATAAATTTTTACATTTCAGTGCCATTTTTTAAAAGTTAAAATATCGATTTTCTTAAAAAAAAAGAAGTTAAATTTGTTTAATTTTAGTCCATGTACTATCAAATGTGTAATTTTAGTCCTTTTACTTTCAGTCAATCTTAAATTTAGTCCTTCCAAATTAACTTTTATTGAAATTGATTAAATAATCATAATAATTTTCATGCAAAGATACACACTATGTGAATATGTTTTCAAATTTTATAGTGAAAATACTAATGAAAAATAAAAAGTAATGAAAAAATTTACAATAAACTAGTTGTAGGGACTAAATTTAAGATTTATGAAAAATACAGGGACTAAAATTGGACAATTGAAAGTATGGGGACTAAAATTAAACAAATTTGAAAGTATGAAGACCAAAATGGTATTTTAACCAAAAAAATATCATTTTGAATAAAAAAAATCACTGATAGAAAAAATGTCAAACTATTTATAGAAAATAGCAAAAAAAAACTCATAAACATTGATGTACTTCTATTAGCATTTATCAGTGATAGACTTCTATCATTTCTATCACTAATATATTTAGCTTAAATTTCGATGAGTAAATTAATCTTAGAAAATTATATATTATTTTAGTCCATATACTTTAACTTTTGGTTCATTTTAGTCATAAACTTTCAAATTCTTCGTTTGGGTCTCTATACTTTCAAAGCATCCACTTTAGTCCATATATTTTAGAAAAGTAACCATCTTAGTCATTCATTTTCATTTTTAAGAGACAAAAAATCTCAATTTTTAATAGATACGTAGACTAAAACGAATCAAAATTAAAAGTAAAAGGACTAAACCGAATATTTGAAATTAAATATATCAAAATGAACAAATGTTTAAAATAAAGAGACCAAAATAAAAAATTTAAAAATACAAACTCTAAAATAAAATAAAAAATATAGAAACTAAAGTTGTTATTTAAAAATATATATTTATTGACAAAAAAAAAAGTACACGTGGGTTGTCTAATTGGTTGGATGCAGGTACCAAAGCCTAACAGAACACACAATAAAGGTATCGAGCACCCAATTCTCACCATTAACATGGACCTCAATCTCATGGGCTTTGGGTTTGTTTCTGGCCGGCCCAATCCTCGCCTTCGCTTCCTTCCACCTCGATTACGGCTTCAATCAACACCTAATCACTCTCGCCGCCGTCGCTGCCGGAGCTCTGTCGTGTCTCCCGACAGGCCTCTTCAAAACGGTCAAGATTTTTCCTGTTTACATTATTTTAATCGTCATTGCTCACTCTGTGGCCTTCACCTCTCACACGCGCCACCTCGGTCTCATGCTCCGTGGCCTCACCGGACCCATCCTCCATGAGCCCAAATTCTCCCAAAGAAGAACCGGATCTGGTCTCATTTCCTCCTGCTCCTCCGCCGTCGGCGGTCTCGGTTCCGCCGCTCTCTCCGCCTTCACTTACCACATGCTTCGACGGTTGGTATTCTAACTAGCACTCTCTTCATATTAATCGAGTTAATGTGTAAATTTAGAATTAGAATTTAATTTATTGGTTTAATAAAATGGGTTGTTTTAAAAATTCGAAAAAATATCAAATTATTTAAAGAATAATCACTAATTTTTCTATATTGGTAAATAATTTGATATTTTTTTAATTTATAATAATTTTTCTAATAAAATCTTCATTAATAATATTAAAAACTAATTCATGAGATTTTATCGAATTATAGAAACTGAATTTTAATTATAATTTATATAAACTAAATTCTAAATTTGTAATTTAGTCTACATAATACTGTACTGTAAATTTTATAATATTTGGCTATCAAATAAGCTGTAAATTTTGAAATGTTTTATTTTTATTAGGTTAATTTATAAGTTTAGTCTTTGAACTATGAAATTTTGTCTATTTGATTCAAAAATTTTGAGAATAGAAGGGTTGAATAATAAATTGGTTCCTAAACTTTCAAAATTAAATATTTTAAAAGACTAAATTTGTATTTTATTTATTTATTTATTACATAGTTCAAAAATTTTGAGAATAGAAGAGTTGAATAATGAATTGGTTCCTAAACTTTTAAAATTAAACATTTTAAAGGACTAAATTTGTATTTTATTTATTTATTATTGGACTCTTAATTTATTTTAATGAAATACTTGCGAATTTTAGACTTGTTTTAAAATATACTTTTTTTCATTAAAATAAAAATTCAAGTGACAACAACTAAAAAAAATATAAGCACACGAGATATTGTTAATTTATTTCTATAATCAACTTTCATACATACTACTACTAGGTCAATGTTAAATATGTCTGTATGGTTTTTTTCAACACCCTAACTAATCATTTAGAGGATTGAACTTCTAACCTTTAAAAAAGAAAAACATGTATGAGTTAAACTTACTTTAACAATGTCACACCAATCTTAAAATATTTTGTTTTAATTTAAGACATAATTGACTAAATTATATAATATTCTTCAATTCCACTCTTATTTAAAAAAAAATACTCTTATTATTTACAATGTTGCAATGCTAGCACTGAATTTTCATAAATATTTTCAAATTATCTTTAGAGTAAAATTTATTTAAAATTTTAGATAAAATTGAGACTTAAAATGATGTGATAATAATCTAAAATAATAGGGTAATCTAATTTTTAGATTAGGTCACGATGACACCATTCCAATATCTTGTGAAAAGAAAAAGAATCTGTAAGACTTTATGCTACCATGATAGTTTTGATACGGTTATGAAAAATATTAATAAAATGCACTCGAGAGCTTAGGAATATCTTTTTTAAAAATATTTTTATTATTATTTTCTGTAACTGTGTATGCTTTTGGTTGTTAGTGACAAGCAAGTGCAAGAAGGAGACGACAATCACTTCCTTAACCTATGGATCGTCACGATCTTCGCCGGCCTTCAATGGCTTCTCGGAATTTTTCATGTCTTCCTCACAAATCGATCAATCTCTGTAACAATCCCTTCCGATTCAGAGCTTCACATTCTTTCAATTTTCAAATATCCTCACGCAATCGGCACCATAATCTCCGGCGGATTCCTCTCTTCCTTCACCACAATCTCCATCTTCACCGCCGTTTTACTCTTCCTAATCGGTCAAATCTGTTTCAAACCAGTCTTGATTCTCTATCTATGGCTAATCTACTTCCTCGTCCCTCTAATTTCTCTTCCATTACTCCATCAATTTCAGATCCGAATCAAAGCGGATGCCTCAAAAATGCTGATCCTAGGGTTCATCTTGTCCGCCGCCACTTCCGCCACCTGTTTCTACTTCCACACCGGCGAGTGGCGGCGGCGCGTGGTGTTCGTCTTCGCCGTTCTTCAAGGCACGGCGGCGGCGCTTCTTCATGCGTACGGAAGAGTTTTGGTGCTTGATTGCTCGCCGGCGGGAAAGGAAGGTGCGATTTCGATGTGGTTTTCATGGATAAGAGCGATCGGTGGTTGCGTTGGATTTACGGTCGCGGCGGTGGTTCCGGCGAGGTTGCAGGTTTCTTCCGGTGTGGCATTTTGCTGCGCCGTTGTCGGAGGAATGGTGTTGATTTTTGGTAATGTTACTGATTACGGCGGCGCTGTGGCGGCGGGGCATGTGAAAGATGACAGTGAAAAGGGATCGCCGGTGATTGGATTGGAGTCGCGGAGTGAGAGTAAAGAGCTTGAGTCGCCGTGA ATGGCAGAGCAAAGCCCTAAACCAAAGCCATCGGAAATCCAGAACTTTCCGCCGCCGAAGTCCACCACCGGCCGGAGCATGTCGACGCCAAGGTCGGCGAGCGGCGGCGGGGGTAGCCGGAGGGAGACGCCGGATTTCCACAGCACAGCGGCGAAACTGGAGAGGGCGAAGGAGGTGTATAGAGCGTACGAAGGGCATGGAGAAAGGCCGACCATTGTGGAGATTGTGGGATGGTGTTTCTATGAACTTTGCTCGTTGTTTGTATTGACGTTGTTGATTCCGGTTGTTTTTCCGTTGATTATCAGCCAGATTAGTGGAACTCTGACGGAACCGCCTCAGGGATGGTTTAAGAGCTTTATGGGCTTCGATTGCCCTCCTAGAGAAATGCAACTGTACCAAAGCCTAACAGAACACACAATAAAGGTATCGAGCACCCAATTCTCACCATTAACATGGACCTCAATCTCATGGGCTTTGGGTTTGTTTCTGGCCGGCCCAATCCTCGCCTTCGCTTCCTTCCACCTCGATTACGGCTTCAATCAACACCTAATCACTCTCGCCGCCGTCGCTGCCGGAGCTCTGTCGTGTCTCCCGACAGGCCTCTTCAAAACGGTCAAGATTTTTCCTGTTTACATTATTTTAATCGTCATTGCTCACTCTGTGGCCTTCACCTCTCACACGCGCCACCTCGGTCTCATGCTCCGTGGCCTCACCGGACCCATCCTCCATGAGCCCAAATTCTCCCAAAGAAGAACCGGATCTGGTCTCATTTCCTCCTGCTCCTCCGCCGTCGGCGGTCTCGGTTCCGCCGCTCTCTCCGCCTTCACTTACCACATGCTTCGACGTGACAAGCAAGTGCAAGAAGGAGACGACAATCACTTCCTTAACCTATGGATCGTCACGATCTTCGCCGGCCTTCAATGGCTTCTCGGAATTTTTCATGTCTTCCTCACAAATCGATCAATCTCTGTAACAATCCCTTCCGATTCAGAGCTTCACATTCTTTCAATTTTCAAATATCCTCACGCAATCGGCACCATAATCTCCGGCGGATTCCTCTCTTCCTTCACCACAATCTCCATCTTCACCGCCGTTTTACTCTTCCTAATCGGTCAAATCTGTTTCAAACCAGTCTTGATTCTCTATCTATGGCTAATCTACTTCCTCGTCCCTCTAATTTCTCTTCCATTACTCCATCAATTTCAGATCCGAATCAAAGCGGATGCCTCAAAAATGCTGATCCTAGGGTTCATCTTGTCCGCCGCCACTTCCGCCACCTGTTTCTACTTCCACACCGGCGAGTGGCGGCGGCGCGTGGTGTTCGTCTTCGCCGTTCTTCAAGGCACGGCGGCGGCGCTTCTTCATGCGTACGGAAGAGTTTTGGTGCTTGATTGCTCGCCGGCGGGAAAGGAAGGTGCGATTTCGATGTGGTTTTCATGGATAAGAGCGATCGGTGGTTGCGTTGGATTTACGGTCGCGGCGGTGGTTCCGGCGAGGTTGCAGGTTTCTTCCGGTGTGGCATTTTGCTGCGCCGTTGTCGGAGGAATGGTGTTGATTTTTGGTAATGTTACTGATTACGGCGGCGCTGTGGCGGCGGGGCATGTGAAAGATGACAGTGAAAAGGGATCGCCGGTGATTGGATTGGAGTCGCGGAGTGAGAGTAAAGAGCTTGAGTCGCCGTGA ATGGCAGAGCAAAGCCCTAAACCAAAGCCATCGGAAATCCAGAACTTTCCGCCGCCGAAGTCCACCACCGGCCGGAGCATGTCGACGCCAAGGTCGGCGAGCGGCGGCGGGGGTAGCCGGAGGGAGACGCCGGATTTCCACAGCACAGCGGCGAAACTGGAGAGGGCGAAGGAGGTGTATAGAGCGTACGAAGGGCATGGAGAAAGGCCGACCATTGTGGAGATTGTGGGATGGTGTTTCTATGAACTTTGCTCGTTGTTTGTATTGACGTTGTTGATTCCGGTTGTTTTTCCGTTGATTATCAGCCAGATTAGTGGAACTCTGACGGAACCGCCTCAGGGATGGTTTAAGAGCTTTATGGGCTTCGATTGCCCTCCTAGAGAAATGCAACTGTACCAAAGCCTAACAGAACACACAATAAAGGTATCGAGCACCCAATTCTCACCATTAACATGGACCTCAATCTCATGGGCTTTGGGTTTGTTTCTGGCCGGCCCAATCCTCGCCTTCGCTTCCTTCCACCTCGATTACGGCTTCAATCAACACCTAATCACTCTCGCCGCCGTCGCTGCCGGAGCTCTGTCGTGTCTCCCGACAGGCCTCTTCAAAACGGTCAAGATTTTTCCTGTTTACATTATTTTAATCGTCATTGCTCACTCTGTGGCCTTCACCTCTCACACGCGCCACCTCGGTCTCATGCTCCGTGGCCTCACCGGACCCATCCTCCATGAGCCCAAATTCTCCCAAAGAAGAACCGGATCTGGTCTCATTTCCTCCTGCTCCTCCGCCGTCGGCGGTCTCGGTTCCGCCGCTCTCTCCGCCTTCACTTACCACATGCTTCGACGTGACAAGCAAGTGCAAGAAGGAGACGACAATCACTTCCTTAACCTATGGATCGTCACGATCTTCGCCGGCCTTCAATGGCTTCTCGGAATTTTTCATGTCTTCCTCACAAATCGATCAATCTCTGTAACAATCCCTTCCGATTCAGAGCTTCACATTCTTTCAATTTTCAAATATCCTCACGCAATCGGCACCATAATCTCCGGCGGATTCCTCTCTTCCTTCACCACAATCTCCATCTTCACCGCCGTTTTACTCTTCCTAATCGGTCAAATCTGTTTCAAACCAGTCTTGATTCTCTATCTATGGCTAATCTACTTCCTCGTCCCTCTAATTTCTCTTCCATTACTCCATCAATTTCAGATCCGAATCAAAGCGGATGCCTCAAAAATGCTGATCCTAGGGTTCATCTTGTCCGCCGCCACTTCCGCCACCTGTTTCTACTTCCACACCGGCGAGTGGCGGCGGCGCGTGGTGTTCGTCTTCGCCGTTCTTCAAGGCACGGCGGCGGCGCTTCTTCATGCGTACGGAAGAGTTTTGGTGCTTGATTGCTCGCCGGCGGGAAAGGAAGGTGCGATTTCGATGTGGTTTTCATGGATAAGAGCGATCGGTGGTTGCGTTGGATTTACGGTCGCGGCGGTGGTTCCGGCGAGGTTGCAGGTTTCTTCCGGTGTGGCATTTTGCTGCGCCGTTGTCGGAGGAATGGTGTTGATTTTTGGTAATGTTACTGATTACGGCGGCGCTGTGGCGGCGGGGCATGTGAAAGATGACAGTGAAAAGGGATCGCCGGTGATTGGATTGGAGTCGCGGAGTGAGAGTAAAGAGCTTGAGTCGCCGTGA MAEQSPKPKPSEIQNFPPPKSTTGRSMSTPRSASGGGGSRRETPDFHSTAAKLERAKEVYRAYEGHGERPTIVEIVGWCFYELCSLFVLTLLIPVVFPLIISQISGTLTEPPQGWFKSFMGFDCPPREMQLYQSLTEHTIKVSSTQFSPLTWTSISWALGLFLAGPILAFASFHLDYGFNQHLITLAAVAAGALSCLPTGLFKTVKIFPVYIILIVIAHSVAFTSHTRHLGLMLRGLTGPILHEPKFSQRRTGSGLISSCSSAVGGLGSAALSAFTYHMLRRDKQVQEGDDNHFLNLWIVTIFAGLQWLLGIFHVFLTNRSISVTIPSDSELHILSIFKYPHAIGTIISGGFLSSFTTISIFTAVLLFLIGQICFKPVLILYLWLIYFLVPLISLPLLHQFQIRIKADASKMLILGFILSAATSATCFYFHTGEWRRRVVFVFAVLQGTAAALLHAYGRVLVLDCSPAGKEGAISMWFSWIRAIGGCVGFTVAAVVPARLQVSSGVAFCCAVVGGMVLIFGNVTDYGGAVAAGHVKDDSEKGSPVIGLESRSESKELESP
BLAST of Lsi07G011470.1 vs. TrEMBL
Match: A0A0A0L1Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G006650 PE=4 SV=1) HSP 1 Score: 918.3 bits (2372), Expect = 4.5e-264 Identity = 478/562 (85.05%), Postives = 510/562 (90.75%), Query Frame = 1
BLAST of Lsi07G011470.1 vs. TrEMBL
Match: D7TDU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00780 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 7.2e-137 Identity = 263/522 (50.38%), Postives = 355/522 (68.01%), Query Frame = 1
BLAST of Lsi07G011470.1 vs. TrEMBL
Match: M5WFV7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022387mg PE=4 SV=1) HSP 1 Score: 494.2 bits (1271), Expect = 2.1e-136 Identity = 259/500 (51.80%), Postives = 349/500 (69.80%), Query Frame = 1
BLAST of Lsi07G011470.1 vs. TrEMBL
Match: M1DBG2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400035874 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 6.3e-133 Identity = 261/519 (50.29%), Postives = 351/519 (67.63%), Query Frame = 1
BLAST of Lsi07G011470.1 vs. TrEMBL
Match: A0A068UT98_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034211001 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 6.3e-133 Identity = 256/514 (49.81%), Postives = 348/514 (67.70%), Query Frame = 1
BLAST of Lsi07G011470.1 vs. NCBI nr
Match: gi|659095497|ref|XP_008448612.1| (PREDICTED: uncharacterized protein LOC103490734 [Cucumis melo]) HSP 1 Score: 964.1 bits (2491), Expect = 1.0e-277 Identity = 497/560 (88.75%), Postives = 529/560 (94.46%), Query Frame = 1
BLAST of Lsi07G011470.1 vs. NCBI nr
Match: gi|778688281|ref|XP_011652708.1| (PREDICTED: uncharacterized protein LOC105435055 [Cucumis sativus]) HSP 1 Score: 918.3 bits (2372), Expect = 6.5e-264 Identity = 478/562 (85.05%), Postives = 510/562 (90.75%), Query Frame = 1
BLAST of Lsi07G011470.1 vs. NCBI nr
Match: gi|645265765|ref|XP_008238304.1| (PREDICTED: uncharacterized protein LOC103336943 [Prunus mume]) HSP 1 Score: 498.8 bits (1283), Expect = 1.2e-137 Identity = 265/517 (51.26%), Postives = 361/517 (69.83%), Query Frame = 1
BLAST of Lsi07G011470.1 vs. NCBI nr
Match: gi|764589946|ref|XP_011465076.1| (PREDICTED: uncharacterized protein LOC101310222 isoform X1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 496.5 bits (1277), Expect = 6.1e-137 Identity = 257/518 (49.61%), Postives = 358/518 (69.11%), Query Frame = 1
BLAST of Lsi07G011470.1 vs. NCBI nr
Match: gi|697173050|ref|XP_009595451.1| (PREDICTED: uncharacterized protein LOC104091753 [Nicotiana tomentosiformis]) HSP 1 Score: 496.5 bits (1277), Expect = 6.1e-137 Identity = 258/507 (50.89%), Postives = 346/507 (68.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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